CN104004790A - Method for producing medium-chain alkanes - Google Patents
Method for producing medium-chain alkanes Download PDFInfo
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- 150000001335 aliphatic alkanes Chemical class 0.000 title claims abstract 6
- 238000004519 manufacturing process Methods 0.000 title claims abstract 5
- 238000000034 method Methods 0.000 claims abstract 9
- 108090000790 Enzymes Proteins 0.000 claims abstract 4
- 241000588724 Escherichia coli Species 0.000 claims abstract 4
- 230000014509 gene expression Effects 0.000 claims abstract 2
- 239000013612 plasmid Substances 0.000 claims 11
- BPHPUYQFMNQIOC-NXRLNHOXSA-N isopropyl beta-D-thiogalactopyranoside Chemical compound CC(C)S[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O BPHPUYQFMNQIOC-NXRLNHOXSA-N 0.000 claims 5
- 108010011449 Long-chain-fatty-acid-CoA ligase Proteins 0.000 claims 4
- 238000006555 catalytic reaction Methods 0.000 claims 4
- 108090001018 hexadecanal dehydrogenase (acylating) Proteins 0.000 claims 4
- 101150071111 FADD gene Proteins 0.000 claims 3
- 125000003275 alpha amino acid group Chemical group 0.000 claims 3
- 230000006324 decarbonylation Effects 0.000 claims 3
- 238000006606 decarbonylation reaction Methods 0.000 claims 3
- 239000013604 expression vector Substances 0.000 claims 3
- 125000002485 formyl group Chemical class [H]C(*)=O 0.000 claims 3
- 229930195733 hydrocarbon Natural products 0.000 claims 3
- 150000002430 hydrocarbons Chemical class 0.000 claims 3
- 230000006698 induction Effects 0.000 claims 3
- 150000004667 medium chain fatty acids Chemical class 0.000 claims 3
- 239000002773 nucleotide Substances 0.000 claims 3
- 125000003729 nucleotide group Chemical group 0.000 claims 3
- 230000009465 prokaryotic expression Effects 0.000 claims 3
- 241000588624 Acinetobacter calcoaceticus Species 0.000 claims 2
- -1 C14:0/C16:0 Chemical class 0.000 claims 2
- RGJOEKWQDUBAIZ-IBOSZNHHSA-N CoASH Chemical compound O[C@@H]1[C@H](OP(O)(O)=O)[C@@H](COP(O)(=O)OP(O)(=O)OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)NCCS)O[C@H]1N1C2=NC=NC(N)=C2N=C1 RGJOEKWQDUBAIZ-IBOSZNHHSA-N 0.000 claims 2
- 241000192656 Nostoc Species 0.000 claims 2
- 125000002252 acyl group Chemical group 0.000 claims 2
- RGJOEKWQDUBAIZ-UHFFFAOYSA-N coenzime A Natural products OC1C(OP(O)(O)=O)C(COP(O)(=O)OP(O)(=O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCS)OC1N1C2=NC=NC(N)=C2N=C1 RGJOEKWQDUBAIZ-UHFFFAOYSA-N 0.000 claims 2
- 239000005516 coenzyme A Substances 0.000 claims 2
- 229940093530 coenzyme a Drugs 0.000 claims 2
- KDTSHFARGAKYJN-UHFFFAOYSA-N dephosphocoenzyme A Natural products OC1C(O)C(COP(O)(=O)OP(O)(=O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCS)OC1N1C2=NC=NC(N)=C2N=C1 KDTSHFARGAKYJN-UHFFFAOYSA-N 0.000 claims 2
- 150000002148 esters Chemical class 0.000 claims 2
- 101150109930 ACR gene Proteins 0.000 claims 1
- 108020002663 Aldehyde Dehydrogenase Proteins 0.000 claims 1
- 102000005369 Aldehyde Dehydrogenase Human genes 0.000 claims 1
- 241000894006 Bacteria Species 0.000 claims 1
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical group [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims 1
- 102000005870 Coenzyme A Ligases Human genes 0.000 claims 1
- 239000002253 acid Substances 0.000 claims 1
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims 1
- 230000004129 fatty acid metabolism Effects 0.000 claims 1
- 230000000968 intestinal effect Effects 0.000 claims 1
- 150000002632 lipids Chemical class 0.000 claims 1
- 239000002207 metabolite Substances 0.000 claims 1
- 108090000623 proteins and genes Proteins 0.000 claims 1
- 230000006798 recombination Effects 0.000 claims 1
- 238000005215 recombination Methods 0.000 claims 1
- 230000015572 biosynthetic process Effects 0.000 abstract 2
- 239000002803 fossil fuel Substances 0.000 abstract 2
- 230000004060 metabolic process Effects 0.000 abstract 2
- VNWKTOKETHGBQD-UHFFFAOYSA-N methane Chemical compound C VNWKTOKETHGBQD-UHFFFAOYSA-N 0.000 abstract 2
- 230000000813 microbial effect Effects 0.000 abstract 2
- 238000003786 synthesis reaction Methods 0.000 abstract 2
- 102000004190 Enzymes Human genes 0.000 abstract 1
- 239000002551 biofuel Substances 0.000 abstract 1
- 229910052799 carbon Inorganic materials 0.000 abstract 1
- 238000000855 fermentation Methods 0.000 abstract 1
- 230000004151 fermentation Effects 0.000 abstract 1
- 239000000446 fuel Substances 0.000 abstract 1
- 230000002068 genetic effect Effects 0.000 abstract 1
- 244000005700 microbiome Species 0.000 abstract 1
- 239000003345 natural gas Substances 0.000 abstract 1
- 230000001105 regulatory effect Effects 0.000 abstract 1
- 241000894007 species Species 0.000 abstract 1
- 239000000126 substance Substances 0.000 abstract 1
- 230000009466 transformation Effects 0.000 abstract 1
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
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- Y02P—CLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
- Y02P20/00—Technologies relating to chemical industry
- Y02P20/50—Improvements relating to the production of bulk chemicals
- Y02P20/59—Biological synthesis; Biological purification
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Abstract
本发明属于生物化工领域,特别涉及一种中碳链烷烃的生产方法。烷烃主要来源于石油和天然气,也可以通过自然界中一些物种的新陈代谢产生,但是这些微生物生产烷烃的量很低。随着现代分子生物学尤其是合成生物学的飞速发展,调控烷烃合成过程中相关酶的表达,使微生物细胞只需通过简单的代谢就可以产生烷烃,是生产可再生能源的前沿技术。该方法为传统石化燃料供给不足、新型生物燃料不能完全替代石化燃料等问题提供了一个绝佳的解决方案。与其他菌株相比,大肠杆菌具有遗传背景清楚、易于改造、生长速度快、适合高密度发酵等优点,是微生物法合成化学品和燃料的理想菌株。利用大肠杆菌生产生物烷烃是一种不争地、不靠天、可持续生产的新途径。The invention belongs to the field of biochemical industry, in particular to a production method of medium-carbon paraffins. Alkanes are mainly derived from oil and natural gas, and can also be produced by the metabolism of some species in nature, but the amount of alkanes produced by these microorganisms is very low. With the rapid development of modern molecular biology, especially synthetic biology, regulating the expression of related enzymes in the process of alkane synthesis, so that microbial cells can produce alkane through simple metabolism, is a cutting-edge technology for the production of renewable energy. This method provides an excellent solution to the problems of insufficient supply of traditional fossil fuels and the inability of new biofuels to completely replace fossil fuels. Compared with other strains, Escherichia coli has the advantages of clear genetic background, easy transformation, fast growth rate, and suitable for high-density fermentation. It is an ideal strain for microbial synthesis of chemicals and fuels. Using Escherichia coli to produce bioalkane is a new way of indisputable, unreliable and sustainable production.
Description
技术领域 technical field
本发明属于生物化工领域,特别涉及一种中碳链烷烃的生产方法。 The invention belongs to the field of biochemical industry, in particular to a production method of medium-carbon paraffins. the
背景技术 Background technique
烷烃,是化石能源的主要组分,比如石油的分离产物汽油、柴油以及航空燃油等,都是由不同碳链长度的烷烃组成的。而近年来,随着化石能源的日趋枯竭,以及原油消耗量的激增,化石能源供给量不足和怎样实现可持续发展,已经成为人类所必须关注的问题。因此,关于如何利用可再生能源替代化石燃料的研究,逐渐成为新生的热点课题。 Alkanes are the main components of fossil energy, such as gasoline, diesel and aviation fuel, which are the separation products of petroleum, and are composed of alkanes with different carbon chain lengths. In recent years, with the depletion of fossil energy and the sharp increase in crude oil consumption, the shortage of fossil energy supply and how to achieve sustainable development have become issues that human beings must pay attention to. Therefore, research on how to use renewable energy to replace fossil fuels has gradually become a new hot topic. the
目前应用最为广泛的化石能源替代品,主要包括燃料乙醇、燃料丁醇以及生物柴油等。但是这几种替代物在应用过程中,都存在许多问题,比如醇类汽油极易形成分层并且腐蚀发动机橡胶、生物柴油原料成本及生产工艺能耗均较高等,致使它们不可能完全替代汽油、柴油等烃类物质。所以,为化石能源寻求一种更好的可再生替代物,即一种低成本、高效率的烷烃生产方法,可谓迫在眉睫。 Currently the most widely used fossil energy substitutes mainly include fuel ethanol, fuel butanol and biodiesel. However, there are many problems in the application of these alternatives, such as alcohol gasoline is easy to form stratification and corrode the engine rubber, the cost of biodiesel raw materials and the energy consumption of the production process are high, making it impossible for them to completely replace gasoline , diesel and other hydrocarbons. Therefore, it is imminent to seek a better renewable alternative to fossil energy, that is, a low-cost, high-efficiency method for alkane production. the
烷烃主要来源于石油和天然气,也可以通过自然界中一些物种的新陈代谢产生,比如植物的角质层蜡、昆虫的信息素等,但是学术界对于利用微生物这一“细胞工厂”来生产烷烃的研究却少之又少。随着现代分子生物学尤其是合成生物学的飞速发展,利用基因工程的手段,调控烷烃合成过程中相关酶的表达,使微生物细胞只需通过简单的代谢就可以产生烷烃,是生产可再生能源的前沿技术。该方法为传统石化燃料供给不足、新型生物燃料不能完全替代石化燃料等问题提供了一个绝佳的解决方案。与其他菌株相比,大肠杆菌具有遗传 背景清楚、易于改造、生长速度快、适合高密度发酵等优点,是微生物法合成化学品和燃料的理想菌株。利用大肠杆菌生产生物烷烃是一种不争地、不靠天、可持续生产的新途径。 Alkanes are mainly derived from oil and natural gas, and can also be produced through the metabolism of some species in nature, such as cuticle wax of plants, pheromones of insects, etc. Very few. With the rapid development of modern molecular biology, especially synthetic biology, genetic engineering is used to regulate the expression of related enzymes in the process of alkanes synthesis, so that microbial cells can produce alkanes only through simple metabolism, which is the key to the production of renewable energy. cutting-edge technology. This method provides an excellent solution to the problems of insufficient supply of traditional fossil fuels and the inability of new biofuels to completely replace fossil fuels. Compared with other strains, Escherichia coli has the advantages of clear genetic background, easy transformation, fast growth, suitable for high-density fermentation, etc. It is an ideal strain for microbial synthesis of chemicals and fuels. Using Escherichia coli to produce bioalkane is a new way of indisputable, unreliable and sustainable production. the
与公知技术相比,本发明具有以下优点: Compared with known technology, the present invention has the following advantages:
(1)直接利用微生物以可再生生物质为原料代谢得到的烷烃,可大大缓解化石能源供给不足的问题。 (1) The direct use of alkanes metabolized by microorganisms using renewable biomass as raw materials can greatly alleviate the problem of insufficient supply of fossil energy. the
(2)通过本发明得到的烷烃,与石油中的烷烃无异,更接近化石燃料本身的性质,克服了燃料乙醇、燃料丁醇、生物柴油等存在的一系列问题,利用率极高。 (2) The alkane obtained by the present invention is no different from the alkane in petroleum, and is closer to the properties of fossil fuel itself, overcomes a series of problems existing in fuel ethanol, fuel butanol, biodiesel, etc., and has a very high utilization rate. the
(3)微生物只需通过简单的代谢便可产生烷烃,生产周期短,不受场地、季节等因素影响,不占用耕地资源,容易实现工业化生产。 (3) Microorganisms can produce alkanes only through simple metabolism, the production cycle is short, it is not affected by factors such as site and season, and it does not occupy arable land resources, so it is easy to realize industrial production. the
发明内容 Contents of the invention
本发明的目的在于提供一种在重组大肠杆菌(Escherichia coli),以自然界中大量存在并可再生的脂肪酸为原料,合成烷烃的可再生能源工艺路线,使微生物可以作为细胞工厂,发酵生产烷烃。 The object of the present invention is to provide a renewable energy process route for synthesizing alkanes in recombinant Escherichia coli (Escherichia coli) with a large amount of renewable fatty acids in nature as raw materials, so that microorganisms can be used as cell factories to ferment and produce alkanes. the
本发明首先对来自大肠杆菌K12菌株中的酰基辅酶A合成酶基因进行过表达,构建基因工程菌,即将基因fadD克隆至原核表达载体pACYCDuet-1中,得到重组质粒pACYCDuet-fadD,质粒1。表达的酰基辅酶A合成酶可以通过外源性流加C14:0/C16:0等中链脂肪酸的方式,催化脂肪酸生成代谢产物酯酰辅酶A,并使这一前体物质在宿主细胞中得到积累。 The present invention firstly overexpresses the acyl-CoA synthetase gene from Escherichia coli K12 strain to construct a genetically engineered bacterium, that is, the gene fadD is cloned into the prokaryotic expression vector pACYCDuet-1 to obtain the recombinant plasmid pACYCDuet-fadD, plasmid 1. The expressed acyl-CoA synthetase can catalyze fatty acid to produce metabolite ester acyl-CoA by adding medium-chain fatty acid such as C14:0/C16:0 exogenously, and make this precursor substance obtain in host cells accumulation. the
再异源表达来自不动杆菌ADP1(Acinetobacter baylyi)中的酰基辅酶A还原酶。具体为将不动杆菌中酰基辅酶A还原酶基因acr克隆至原核表达载体 pETDuet-1中,得到重组质粒pETDuet-acr,质粒2。表达的酰基辅酶A还原酶可以催化细胞中积累的酯酰辅酶A还原为C14/C16的脂肪醛。 Then heterologous expression of acyl-CoA reductase from Acinetobacter baylyi ADP1 (Acinetobacter baylyi). Specifically, the acyl-CoA reductase gene acr in Acinetobacter was cloned into the prokaryotic expression vector pETDuet-1 to obtain the recombinant plasmid pETDuet-acr, plasmid 2. The expressed acyl-CoA reductase can catalyze the reduction of acyl-CoA accumulated in cells to C14/C16 fatty aldehydes. the
最后,异源表达来自念珠藻(Nostoc punctiforme)中的醛脱羰基酶。即将醛脱羰基酶基因dc克隆至原核表达载体质粒2中,得到重组质粒pETDuet-acr-dc,质粒3。表达的醛脱羰基酶可以催化脂肪醛脱去羰基,生成烷烃。 Finally, heterologous expression of aldehyde decarbonylase from Nostoc punctiforme. That is, the aldehyde decarbonylase gene dc was cloned into the prokaryotic expression vector plasmid 2 to obtain recombinant plasmids pETDuet-acr-dc and plasmid 3 . The expressed aldehyde decarbonylase can catalyze the decarbonylation of aliphatic aldehydes to generate alkanes. the
将重组质粒1/质粒3共同转入大肠杆菌BL21(DE3)中,IPTG诱导重组质粒进行共表达,即可通过外源性流加C14:0/C16:0脂肪酸的方式,使脂肪酸逐步代谢生成C13/C15等碳链长度不等的烷烃,其中外源性流加C14:0脂肪酸得到的烷烃产量为2.17mg/L,外源性流加C16:0脂肪酸得到的烷烃产量为1.81mg/L,从而得到利用重组大肠杆菌直接合成烷烃的可再生资源工艺路线。 The recombinant plasmid 1/plasmid 3 is co-transformed into E. coli BL21(DE3), and IPTG induces the co-expression of the recombinant plasmids, and the fatty acids can be gradually metabolized by adding C14:0/C16:0 fatty acids exogenously. For alkanes with different carbon chain lengths such as C13/C15, the alkane yield obtained by adding C14:0 fatty acid exogenously is 2.17mg/L, and the alkane yield obtained by adding C16:0 fatty acid exogenously is 1.81mg/L , so as to obtain the renewable resource process route of directly synthesizing alkanes by recombinant Escherichia coli. the
本发明提供的方法,在大肠杆菌中表达特异性调控酰基辅酶A合成、酰基辅酶A还原以及醛脱羰基反应的关键酶基因,可以利用微生物代谢天然脂肪酸得到的烷烃,并进行高密度发酵,为可再生烷烃的合成开辟一条新的途径。 The method provided by the present invention expresses in Escherichia coli the key enzyme gene that specifically regulates the synthesis of acyl-CoA, the reduction of acyl-CoA and the decarbonylation reaction of aldehydes, and can use the alkanes obtained from the metabolism of natural fatty acids by microorganisms and carry out high-density fermentation to obtain The synthesis of renewable alkanes opens a new route. the
附图说明 Description of drawings
图1:DNA琼脂糖凝胶电泳。右侧为纯化后的大肠杆菌中酰基辅酶A合成酶基因PCR产物,1686bp。左侧为DNA大小标准品。 Figure 1: DNA Agarose Gel Electrophoresis. The right side is the purified Escherichia coli acyl-CoA synthetase gene PCR product, 1686bp. On the left is the DNA size standard. the
图2:构建的重组载体pACYCDuet-fadD的图谱,fadD基因克隆于pACYCDuet-1载体,基因两端带有NCOⅠ和EcoRⅠ位点。将其编号为质粒1。 Figure 2: Map of the constructed recombinant vector pACYCDuet-fadD. The fadD gene is cloned into the pACYCDuet-1 vector with NCOⅠ and EcoRI sites at both ends of the gene. It was numbered as plasmid 1. the
图3:DNA琼脂糖凝胶电泳。右侧为纯化后的不动杆菌中酰基辅酶A还原酶基因PCR产物,888bp。左侧为DNA大小标准品。 Figure 3: DNA agarose gel electrophoresis. The right side is the purified Acinetobacter acyl-CoA reductase gene PCR product, 888bp. On the left is the DNA size standard. the
图4:构建的重组载体pETDuet-acr的图谱,acr基因克隆于pETDuet-1载体,基因两端带有NCOⅠ和BamHⅠ位点。将其编号为质粒2。 Figure 4: Map of the constructed recombinant vector pETDuet-acr. The acr gene is cloned in the pETDuet-1 vector, with NCOⅠ and BamHI sites at both ends of the gene. It was numbered plasmid 2. the
图5:DNA琼脂糖凝胶电泳。右侧为纯化后的念珠藻中醛脱羰基酶基因PCR产物,699bp。左侧为DNA大小标准品。 Figure 5: DNA agarose gel electrophoresis. The right side is the purified aldehyde decarbonylase gene PCR product in Nostoc algae, 699bp. On the left is the DNA size standard. the
图6:构建的重组载体pETDuet-acr-dc的图谱,dc基因克隆于pETDuet-acr载体,基因两端带有BglⅡ和HindⅢ位点。将其编号为质粒3。 Figure 6: Map of the constructed recombinant vector pETDuet-acr-dc. The dc gene is cloned into the pETDuet-acr vector, with BglⅡ and HindⅢ sites at both ends of the gene. It was numbered plasmid 3. the
图7:含有质粒1/质粒3的工程大肠杆菌经诱导后,外源性流加C14:0脂肪酸,其培养液中烷烃的生产情况;C13表示tridecane;C15表示pentadecane。 Figure 7: The production of alkanes in the culture medium of engineered Escherichia coli containing plasmid 1/plasmid 3 induced by exogenously fed C14:0 fatty acid; C13 means tridecane; C15 means pentadecane. the
图8:含有质粒1/质粒3的工程大肠杆菌经诱导后,外源性流加C16:0脂肪酸,其培养液中烷烃的生产情况;C13表示tridecane;C15表示pentadecane。 Figure 8: The production of alkane in the culture medium of engineered Escherichia coli containing plasmid 1/plasmid 3 induced by exogenously fed C16:0 fatty acid; C13 means tridecane; C15 means pentadecane. the
具体实施方式 Detailed ways
本发明提供的一种利用重组大肠杆菌直接合成烷烃的可再生能源工艺路线,使天然脂肪酸得到有效利用。本发明通过以下方案解决这一技术问题:首先以大肠杆菌基因组DNA为模板,设计相应的引物并添加相应克隆酶切位点,扩增fadD基因,其核酸序列如序列1所示,各自所编码的氨基酸序列如序列2所示。PCR扩增后回收获得目的基因DNA片段,酶切后连接至原核表达载体pACYCDuet-1的相应酶切位点上,将连接产物转化到大肠杆菌感受态细胞中,筛选获得阳性重组质粒pACYCDuet-fadD(质粒1),其质粒图谱如图2所示。质粒经纯化、电泳检测、测序鉴定目的基因。 The invention provides a renewable energy process route for directly synthesizing alkanes by using recombinant Escherichia coli, so that natural fatty acids can be effectively utilized. The present invention solves this technical problem through the following scheme: first, using Escherichia coli genomic DNA as a template, designing corresponding primers and adding corresponding cloning enzyme cutting sites to amplify the fadD gene, the nucleic acid sequence of which is shown in sequence 1, each encoded The amino acid sequence of is shown in sequence 2. After PCR amplification, the DNA fragment of the target gene was recovered and ligated to the corresponding restriction site of the prokaryotic expression vector pACYCDuet-1 after enzyme digestion, and the ligation product was transformed into E. coli competent cells, and the positive recombinant plasmid pACYCDuet-fadD was obtained by screening (plasmid 1), its plasmid map is shown in Figure 2. The plasmid was purified, detected by electrophoresis, and sequenced to identify the target gene. the
再利用全基因合成的方法分别合成acr基因,其核酸序列如序列3所示,各自所编码的氨基酸序列如序列4所示,并添加相应克隆酶切位点,酶切后连接至原核表达载体pETDuet-1的相应酶切位点上,将连接产物转化到大肠杆菌感受态细胞中,筛选获得阳性重组质粒pETDuet-acr(质粒2),其质粒图谱如图4所示,并以同样的方法鉴定目的基因。 Then use the whole gene synthesis method to synthesize the acr gene respectively, the nucleic acid sequence of which is shown in sequence 3, and the amino acid sequence encoded by each is shown in sequence 4, and the corresponding cloning enzyme cutting site is added, and the restriction enzyme is connected to the prokaryotic expression vector On the corresponding restriction site of pETDuet-1, the ligation product was transformed into E. coli competent cells, and the positive recombinant plasmid pETDuet-acr (plasmid 2) was obtained by screening, its plasmid map is shown in Figure 4, and the same method was used to Identify the gene of interest. the
最后,利用全基因合成的方法分别合成dc基因,其核酸序列如序列5所示,各自所编码的氨基酸序列如序列6所示,并添加相应克隆酶切位点,酶切后连接至原核表达载体pETDuet-acr的相应酶切位点上,将连接产物转化到大肠杆菌感受态细胞中,筛选获得阳性重组质粒pETDuet-acr-dc(质粒3),其质粒图谱如图4所示,并以同样的方法鉴定目的基因。 Finally, the dc genes were synthesized using the method of whole gene synthesis, the nucleic acid sequence of which is shown in sequence 5, and the amino acid sequences encoded by each are shown in sequence 6, and the corresponding cloning restriction sites were added, and then ligated into prokaryotic expression On the corresponding restriction site of vector pETDuet-acr, the ligation product was transformed into Escherichia coli competent cells, and the positive recombinant plasmid pETDuet-acr-dc (plasmid 3) was obtained by screening, its plasmid map is shown in Figure 4, and The same method was used to identify the target gene. the
将重组质粒1/3在大肠杆菌BL21(DE3)中共同诱导表达与外源性流加脂肪酸后,继续培养,在重组大肠杆菌细胞内即可获得C13/C15等碳链长度不等的烷烃。 After co-inducing expression of recombinant plasmid 1/3 in Escherichia coli BL21(DE3) and adding exogenous fatty acid, the culture continued, and alkanes with different carbon chain lengths such as C13/C15 could be obtained in the recombinant E. coli cells. the
实验步骤 Experimental steps
1)采用的菌种 1) The strains used
大肠杆菌BL21(DE3) Escherichia coli BL21(DE3)
2)采用的培养基 2) The medium used
LB培养基(蛋白胨10g/L,酵母提取物5g/L,NaCl5g/L,121℃湿热灭菌20min),若配制平板培养基,则需加入1.5%琼脂粉;选择性LB培养基:50ml的LB培养基中加入50μL左右0.1%的氨苄青霉素溶液与氯霉素溶液。 LB medium (peptone 10g/L, yeast extract 5g/L, NaCl 5g/L, 121°C damp heat sterilization for 20min), if plate medium is prepared, 1.5% agar powder should be added; selective LB medium: 50ml Add about 50 μL of 0.1% ampicillin solution and chloramphenicol solution to LB medium. the
3)实验方法: 3) Experimental method:
分别以,利用博迈德试剂盒法所提取的大肠杆菌(Escherichia coli)K12菌株基因组、利用全基因合成技术合成的一个来自不动杆菌ADP1(Acinetobacter baylyi)中的酰基辅酶A还原酶[acyl-CoA reductase]基因DNA和一个来自念珠藻(Nostoc punctiforme)中的醛脱羰基酶[aldehyde decarboxylase]基因DNA为模板,PCR扩增获得带有相应克隆酶切位点的酰基辅酶A合成酶[acyl-CoA synthetase]基因、酰基辅酶A还原酶基因以及醛脱羰基酶基因。 Respectively, the genome of Escherichia coli (Escherichia coli) K12 strain extracted by using the Bomide kit method, and an acyl-CoA reductase [acyl- CoA reductase] gene DNA and an aldehyde decarbonylase [aldehyde decarboxylase] gene DNA from Nostoc punctiforme were used as templates, and acyl-CoA synthetase [acyl- CoA synthetase] gene, acyl-CoA reductase gene and aldehyde decarbonylase gene. the
用胶回收试剂盒回收目的片段,用相应的限制性内切酶分别酶切酰基辅酶A合成酶基因fadD片段和原核表达载体pACYCDuet-1,并于16℃过夜连接,即为构建好的原核表达载体质粒1;再用相同的方法将酰基辅酶A还原酶基因acr片段与原核表达载体pETDuet-1连接,即为构建好的原核表达载体质粒2;最后用相同的方法将醛脱羰基酶基因dc片段与质粒2连接,即为构建好的原核表达载体质粒3。 Use the gel recovery kit to recover the target fragment, digest the acyl-CoA synthetase gene fadD fragment and the prokaryotic expression vector pACYCDuet-1 with the corresponding restriction enzymes, and connect them overnight at 16°C, which is the constructed prokaryotic expression Carrier plasmid 1; then use the same method to connect the acr fragment of the acyl-CoA reductase gene to the prokaryotic expression vector pETDuet-1, which is the constructed prokaryotic expression vector plasmid 2; finally use the same method to connect the aldehyde decarbonylase gene dc The fragment is connected with plasmid 2, which is the constructed prokaryotic expression vector plasmid 3. the
将构建好的重组质粒1/质粒3利用电转化方法,共同转化到大肠杆菌BL21(DE3)中,即可获得产酰基辅酶A合成酶、酰基辅酶A还原酶和醛脱羰基酶的工程大肠杆菌。将工程大肠杆菌按1%的接种量接种到50mL LB液体培养基中,37℃快速振荡培养,在培养液中加入诱导剂IPTG与外源性流加脂肪酸后继续在30℃培养48h,诱导表达目的蛋白;提取发酵液中的烷烃,测定C13/C15等烷烃的产量,即为制备好的不同碳链长度的烷烃。 The constructed recombinant plasmid 1/plasmid 3 is co-transformed into E. coli BL21(DE3) by electroporation to obtain engineering E. coli producing acyl-CoA synthetase, acyl-CoA reductase and aldehyde decarbonylase . Inoculate engineering Escherichia coli into 50mL LB liquid medium at an inoculum amount of 1%, rapidly shake culture at 37°C, add inducer IPTG and exogenous feeding fatty acid to the culture medium and continue to culture at 30°C for 48h to induce expression Target protein; extract the alkanes in the fermentation broth, measure the yield of alkanes such as C13/C15, that is, the prepared alkanes with different carbon chain lengths. the
下面结合实施例对本发明的具体方法做进一步的说明: Concrete method of the present invention is described further below in conjunction with embodiment:
实施例1 Example 1
1 大肠杆菌中酰基辅酶A合成酶的克隆与重组载体的构建 1 Cloning of acyl-CoA synthetase in Escherichia coli and construction of recombinant vector
1.1 大肠杆菌中酰基辅酶A合成酶的克隆 1.1 Cloning of acyl-CoA synthetase in Escherichia coli
利用博迈德试剂盒法提取大肠杆菌(Escherichia coli)K12菌株基因组,以大肠杆菌基因组DNA为模板,根据GenBank序列设计引物,并添加相应的酶切位点(NCOⅠ和EcoRⅠ)和保护碱基,PCR扩增fadD编码的酰基辅酶A合成酶[acyl-CoA synthetase]基因,该基因诱导表达的酰基辅酶A合成酶可使脂肪酸通过代谢生成酯酰辅酶A。 The genome of Escherichia coli (Escherichia coli) K12 strain was extracted by using the Bomide kit method, using the Escherichia coli genomic DNA as a template, primers were designed according to the GenBank sequence, and corresponding enzyme cutting sites (NCOI and EcoRI) and protective bases were added, The acyl-CoA synthetase [acyl-CoA synthetase] gene encoded by fadD was amplified by PCR, and the acyl-CoA synthetase induced by this gene can metabolize fatty acids to generate ester acyl-CoA. the
PCR扩增酰基辅酶A合成酶基因fadD所用引物如下: The primers used for PCR amplification of acyl-CoA synthetase gene fadD are as follows:
上游引物:5’-CATGCCATGGGCAAGAAGGTTTGGCTTAACC-3’ Upstream primer: 5'-CATG CCATGG GCAAGAAGGTTTGGCTTAACC-3'
下游引物:5’-CGGAATTCCGGCTCAGGCTTTATTGTCCACT-3’ Downstream primer: 5'-CG GAATTC CGGCTCAGGCTTTATTGTCCACT-3'
PCR反应体系含有0.2μL基因组DNA,上下游引物各0.25μL,dNTPs混合液1.6μL,10×Buffer2μL,pyrobest聚合酶0.4μL,加双蒸水补至20μL。反应条件为预变性94℃4min,变性94℃1min,退火55℃1min,延伸72℃1min50s,循环30次,72℃10min,4℃保存。 The PCR reaction system contained 0.2 μL of genomic DNA, 0.25 μL of upstream and downstream primers, 1.6 μL of dNTPs mixture, 2 μL of 10×Buffer, 0.4 μL of pyrobest polymerase, and added double distilled water to make up to 20 μL. The reaction conditions were pre-denaturation at 94°C for 4min, denaturation at 94°C for 1min, annealing at 55°C for 1min, extension at 72°C for 1min and 50s, 30 cycles, 72°C for 10min, and storage at 4°C. the
这样即可PCR扩增克隆到目的酰基辅酶A合成酶基因fadD: In this way, the target acyl-CoA synthetase gene fadD can be PCR amplified and cloned:
该基因序列长度为1686bp,PCR扩增结束后利用PCR回收试剂盒回收目的基因,并利用1%的琼脂糖凝胶电泳检测,所得到的目的DNA条带为1686bp(如图1所示)。 The length of the gene sequence is 1686bp. After the PCR amplification, the target gene is recovered using a PCR recovery kit and detected by 1% agarose gel electrophoresis. The resulting target DNA band is 1686bp (as shown in Figure 1). the
1.2重组载体质粒1的构建 1.2 Construction of recombinant vector plasmid 1
将克隆的fadD基因与pACYCDuet-1载体(购于Novagen公司)用相同的酶(NCOⅠ和EcoRⅠ)进行双酶切,37℃酶切4小时,载体与外源基因片段按摩尔比1:3-1:10的比例,利用NEB的T4DNA连接酶16℃连接过夜,用该连接产物转化大肠杆菌Top10感受态细胞,涂布带有氯霉素抗性LB琼脂平板,37℃过夜培养后,挑取适量单菌落,在LB培养基中过夜培养,并进行菌落PCR。用试剂盒提取质粒,进行质粒酶切验证,测序结果正确即获得阳性重组载体。测定其序列如序列1所示,编码如序列2所示的氨基酸序列。由于该基因的起始密码子为稀有起始密码子TTG,故在PCR扩增基因时将其改为常见起始密码子ATG,特此说明。 The cloned fadD gene and the pACYCDuet-1 vector (purchased from Novagen) were double digested with the same enzymes (NCOI and EcoRI), digested at 37°C for 4 hours, and the molar ratio of the vector to the foreign gene fragment was 1:3- Use NEB T4 DNA ligase at a ratio of 1:10 to connect overnight at 16°C, use the ligation product to transform Escherichia coli Top10 competent cells, spread chloramphenicol-resistant LB agar plates, culture overnight at 37°C, and pick An appropriate amount of single colony was cultured overnight in LB medium, and colony PCR was performed. Use the kit to extract the plasmid, carry out plasmid digestion verification, and the positive recombinant vector will be obtained if the sequencing result is correct. Its sequence is determined as shown in sequence 1, and the encoding amino acid sequence is shown in sequence 2. Since the start codon of this gene is a rare start codon TTG, it was changed to a common start codon ATG when PCR amplifying the gene, hereby explain. the
所构建的重组载体质粒1的图谱(见图2)。 Map of the constructed recombinant vector plasmid 1 (see Figure 2). the
实施例2 Example 2
1 不动杆菌中酰基辅酶A还原酶的克隆与重组载体的构建 1 Cloning of acyl-CoA reductase in Acinetobacter and construction of recombinant vector
1.1 不动杆菌中酰基辅酶A还原酶的克隆 1.1 Cloning of acyl-CoA reductase in Acinetobacter
利用全基因合成的方法合成不动杆菌(Acinetobacter baylyi)中的酰基辅酶A还原酶[acyl-CoA reductase]基因DNA。该基因诱导表达的酰基辅酶A还原酶可以催化细胞中积累的酯酰辅酶A发生还原反应,生成C14/C16的脂肪醛。 The acyl-CoA reductase [acyl-CoA reductase] gene DNA in Acinetobacter baylyi was synthesized by the method of total gene synthesis. The gene-induced expression of acyl-CoA reductase can catalyze the reduction reaction of ester acyl-CoA accumulated in cells to generate C14/C16 fatty aldehydes. the
以上述合成的不动杆菌中酰基辅酶A还原酶基因DNA为模板,根据GenBank序列设计引物,并添加相应的酶切位点(NCOⅠ和BamHⅠ)与保护碱基。 Using the acyl-CoA reductase gene DNA synthesized above as a template, primers were designed according to the GenBank sequence, and corresponding restriction sites (NCOⅠ and BamHI) and protective bases were added. the
PCR扩增酰基辅酶A还原酶基因acr所用引物如下: The primers used for PCR amplification of acyl-CoA reductase gene acr are as follows:
上游引物:5’-GCAGCCCATGGCTAGCATGAACGCTAAAC-3’ Upstream primer: 5'-GCAGCCCATGGCTAGCATGAACGCTAAAC-3'
下游引物:5’-CCGCTGGATCCTTACCAGTGTTCACCTGG-3’ Downstream primer: 5'-CCGCTGGATCCTTACCAGTGTTCACCTGG-3'
PCR反应体系含有0.2μL基因组DNA,上下游引物各0.25μL,dNTPs混合液1.6μL,10×Buffer2μL,pyrobest聚合酶0.4μL,加双蒸水补至20μL。反应条件为预变性94℃4min,变性94℃1min,退火55℃1min,延伸72℃1min,循环30次,72℃10min,4℃保存。 The PCR reaction system contained 0.2 μL of genomic DNA, 0.25 μL of upstream and downstream primers, 1.6 μL of dNTPs mixture, 2 μL of 10×Buffer, 0.4 μL of pyrobest polymerase, and added double distilled water to make up to 20 μL. The reaction conditions were pre-denaturation at 94°C for 4min, denaturation at 94°C for 1min, annealing at 55°C for 1min, extension at 72°C for 1min, 30 cycles, 72°C for 10min, and storage at 4°C. the
这样即可PCR扩增克隆到目的酰基辅酶A还原酶基因acr: In this way, PCR amplification can be cloned into the target acyl-CoA reductase gene acr:
该基因序列长度为888bp,PCR扩增结束后利用PCR回收试剂盒回收目的基因,并利用1%的琼脂糖凝胶电泳检测,所得到的目的DNA条带为888bp(如图3所示)。 The length of the gene sequence is 888bp. After the PCR amplification, the target gene is recovered with a PCR recovery kit and detected by 1% agarose gel electrophoresis. The obtained target DNA band is 888bp (as shown in Figure 3). the
1.2重组载体质粒2的构建 1.2 Construction of recombinant vector plasmid 2
将克隆的acr基因与pETDuet-1载体(购于Novagen公司)用相同的酶(NCO Ⅰ和BamH Ⅰ)进行双酶切,37℃酶切4小时,载体与外源基因片段按摩尔比1:3-1:10的比例,利用NEB的T4DNA连接酶16℃连接过夜,用该连接产物转化大肠杆菌Top10感受态细胞,涂布带有氨苄青霉素抗性LB琼脂平板,37℃过夜培养后,挑取适量单菌落,在LB培养基中过夜培养,并进行菌落PCR。用试剂盒提取质粒,进行质粒酶切验证,测序结果正确即获得阳性重组载体。测定其序列如序列3所示,编码如序列4所示的氨基酸序列。由于该基因的起始密码子为稀有起始密码子GTG,故在合成该基因时将其改为常见起始密码子ATG,特此说明。 The cloned acr gene and the pETDuet-1 vector (purchased from Novagen) were double digested with the same enzymes (NCO Ⅰ and BamH Ⅰ), digested at 37°C for 4 hours, and the molar ratio of the vector and the foreign gene fragment was 1: 3-1:10 ratio, use NEB T4 DNA ligase to connect overnight at 16°C, use the ligation product to transform Escherichia coli Top10 competent cells, coat LB agar plates with ampicillin resistance, culture overnight at 37°C, pick Take an appropriate amount of single colony, culture overnight in LB medium, and perform colony PCR. Use the kit to extract the plasmid, carry out plasmid digestion verification, and the positive recombinant vector will be obtained if the sequencing result is correct. Its sequence is determined as shown in sequence 3, and the coding amino acid sequence is shown in sequence 4. Since the start codon of this gene is a rare start codon GTG, it was changed to a common start codon ATG when synthesizing the gene, hereby explain. the
所构建的重组载体质粒2的图谱(见图4)。 Map of the constructed recombinant vector plasmid 2 (see Figure 4). the
实施例3 Example 3
1 念珠藻中醛脱羰基酶的克隆与重组载体的构建 1 Cloning of aldehyde decarbonylase from Nostoc algae and construction of recombinant vector
1.1 念珠藻中醛脱羰基酶的克隆 1.1 Cloning of aldehyde decarbonylase from Nostoc algae
利用全基因合成的方法合成念珠藻(Nostoc punctiforme)中的醛脱羰基酶[aldehyde decarboxylase]基因DNA。该基因诱导表达的醛脱羰基酶可以催化脂肪醛脱去羰基,生成烷烃。 The aldehyde decarbonylase [aldehyde decarboxylase] gene DNA in Nostoc punctiforme was synthesized by the method of total gene synthesis. The aldehyde decarbonylase induced by this gene can catalyze the decarbonylation of aliphatic aldehydes to generate alkanes. the
该基因交予公司合成,合成后为pUCE-dc质粒和含有该质粒的菌株。将菌株甘油管接种到LB液体培养基中进行培养,并用omega试剂盒提取质粒,这样即可克隆到含有醛脱羰基酶基因dc的质粒: The gene is handed over to the company for synthesis, and after synthesis, it becomes the pUCE-dc plasmid and the strain containing the plasmid. Inoculate the glycerol tube of the strain into LB liquid medium for cultivation, and extract the plasmid with an omega kit, so that the plasmid containing the aldehyde decarbonylase gene dc can be cloned:
该基因序列长度为699bp,利用1%的琼脂糖凝胶电泳检测,所得到的目的DNA条带为699bp(如图5所示)。 The length of the gene sequence is 699bp, detected by 1% agarose gel electrophoresis, and the obtained target DNA band is 699bp (as shown in FIG. 5 ). the
1.2 重组载体质粒3的构建 1.2 Construction of recombinant vector plasmid 3
将克隆的dc基因与重组载体质粒2用相同的酶(BglⅡ和HindⅢ)进行双酶切,37℃酶切4小时,载体与外源基因片段按摩尔比1:3-1:10的比例,利用NEB的T4DNA连接酶16℃连接过夜,用该连接产物转化大肠杆菌Top10感受态细胞,涂布带有氨苄青霉素抗性LB琼脂平板,37℃过夜培养后,挑取适量单菌落,在LB培养基中过夜培养,并进行菌落PCR。用试剂盒提取质粒,进行质粒酶切验证,测序结果正确即获得阳性重组载体。测定其序列如序列5所示,编码如序列6所示的氨基酸序列。 The cloned dc gene and the recombinant vector plasmid 2 were double digested with the same enzymes (BglⅡ and HindⅢ), digested at 37°C for 4 hours, and the molar ratio of the vector and the foreign gene fragment was 1:3-1:10, Use NEB’s T4 DNA ligase to connect overnight at 16°C, transform Escherichia coli Top10 competent cells with the ligation product, spread the LB agar plate with ampicillin resistance, culture overnight at 37°C, pick an appropriate amount of single colony, and culture in LB culture overnight and perform colony PCR. Use the kit to extract the plasmid, carry out plasmid digestion verification, and the positive recombinant vector will be obtained if the sequencing result is correct. Its sequence is determined as shown in sequence 5, and the encoding amino acid sequence is shown in sequence 6. the
所构建的重组载体质粒3的图谱(见图6)。 Map of the constructed recombinant vector plasmid 3 (see Figure 6). the
实施例4 Example 4
1 含有acr/dc基因工程大肠杆菌的构建 1 Construction of Escherichia coli containing acr/dc genetic engineering
将构建好的含有酰基辅酶A还原酶acr/醛脱羰基酶dc的重组载体质粒3,通过化学转化(即42℃热激)的方法,转化到大肠杆菌BL21(DE3)感受态细胞中,涂布带有氨苄青霉素抗性LB琼脂平板,37℃过夜培养后,挑取阳性菌落,即获得了含有acr/dc所表达的酰基辅酶A还原酶/醛脱氢酶的工程大肠杆菌质粒3,-80℃保存该菌株。 The constructed recombinant vector plasmid 3 containing acyl-CoA reductase acr/aldehyde decarbonylase dc was transformed into Escherichia coli BL21 (DE3) competent cells by chemical transformation (ie heat shock at 42°C), Clothed with ampicillin-resistant LB agar plate, cultured overnight at 37°C, picked positive colonies, and obtained the engineering Escherichia coli plasmid 3 containing the acyl-CoA reductase/aldehyde dehydrogenase expressed by acr/dc,- Store the strain at 80°C. the
实施例5 Example 5
1 含有fadD/acr/dc基因工程大肠杆菌的构建 1 Construction of Escherichia coli containing fadD/acr/dc genetic engineering
1.1 含有acr/dc大肠杆菌感受态细胞的制作 1.1 Production of Escherichia coli Competent Cells Containing acr/dc
将含有质粒3的大肠杆菌BL21(DE3)菌株按照1‰的接种量接种到LB液体试管培养基中,37℃,160rpm振荡过夜,制作一级种子液。将此一级种子液按 照1%的接种量接种到50mL LB液体培养基中(内含50μL氨苄青霉素),37℃,160rpm振荡培养约2.5h,当OD600约为0.5时,将菌液置于冰上冷却30min。于4℃,以4000rpm,离心5min,收集菌体,并用预冷的10%的甘油重悬细胞,重复此过程4-5次,最后用预冷的1mL10%的甘油重悬细胞,并于冰上分装,便制得含有质粒3的大肠杆菌感受态细胞,-80℃保存该细胞。 The Escherichia coli BL21(DE3) strain containing plasmid 3 was inoculated into the LB liquid test tube culture medium according to the inoculum amount of 1‰, and shaken overnight at 37°C and 160rpm to prepare the primary seed solution. Inoculate this primary seed liquid into 50 mL of LB liquid medium (containing 50 μL of ampicillin) according to the inoculum amount of 1%, culture at 37°C with shaking at 160 rpm for about 2.5 hours, and when the OD 600 is about 0.5, put the bacterial liquid into Cool on ice for 30 min. Centrifuge at 4000rpm for 5min at 4°C to collect the bacteria, and resuspend the cells with pre-cooled 10% glycerol, repeat this process 4-5 times, and finally resuspend the cells with 1 mL of pre-cooled 10% glycerol Aliquot on top to prepare Escherichia coli competent cells containing plasmid 3, and store the cells at -80°C.
1.2 含有fadD/acr/dc基因工程大肠杆菌的构建 1.2 Construction of genetically engineered Escherichia coli containing fadD/acr/dc
将构建好的含有酰基辅酶A合成酶基因fadD的重组载体质粒1,通过电转化的方法,转化到含有质粒3的大肠杆菌BL21(DE3)感受态细胞中,涂布带有氨苄青霉素与氯霉素的双重抗性LB琼脂平板,37℃过夜培养后,挑取阳性菌落,即获得了含有fadD/acr/dc所表达的酰基辅酶A合成酶/酰基辅酶A还原酶/醛脱氢酶的工程大肠杆菌质粒1/质粒3,-80℃保存该菌株。 The constructed recombinant vector plasmid 1 containing the acyl-CoA synthetase gene fadD was transformed into Escherichia coli BL21 (DE3) competent cells containing plasmid 3 by electroporation, and coated with ampicillin and chloramphenicol After culturing overnight at 37°C on a double-resistant LB agar plate, the positive colonies were picked, and the project containing the acyl-CoA synthetase/acyl-CoA reductase/aldehyde dehydrogenase expressed by fadD/acr/dc was obtained Escherichia coli plasmid 1/plasmid 3, store the strain at -80°C. the
实施例6 Example 6
1 烷烃的气相色谱-质谱联用检测方法 1 Gas chromatography-mass spectrometry detection method for alkanes
对甲基叔丁醚所萃取的烷烃进行气相色谱-质谱联用检测,气相色谱-质谱条件如下:岛津GCMS-QP2010,HP-5ms色谱柱,载气:高纯氦气(99.999%),进样口温度:280℃,载气柱头压:100.2kPa,分流比10:1;程序升温:起始60℃,维持4min;5℃/min升温至160℃;80℃/min升温至300℃,保持3min;质谱运行时间:2.5-25min,扫描片段:80-800amu。 The alkanes extracted by methyl tert-butyl ether are detected by gas chromatography-mass spectrometry, and the gas chromatography-mass spectrometry conditions are as follows: Shimadzu GCMS-QP2010, HP-5ms chromatographic column, carrier gas: high-purity helium (99.999%), Injection port temperature: 280°C, carrier gas column head pressure: 100.2kPa, split ratio 10:1; temperature program: initial 60°C, maintain 4min; 5°C/min to 160°C; 80°C/min to 300°C , hold for 3min; mass spectrometry running time: 2.5-25min, scan fragment: 80-800amu. the
实施例7 Example 7
外源性流加C14:0脂肪酸生产烷烃 Production of Alkanes by Adding C14:0 Fatty Acids Exogenously
1 中链烷烃的合成 1 Synthesis of medium paraffins
将工程大肠杆菌质粒1/质粒3按1%的接种量接种到50mL LB液体培养液中(内含50μL的氨苄青霉素与50μL的氯霉素),37℃,160rpm振荡培养约3h,当OD600约为0.6时,在菌液中加入0.4mM诱导剂IPTG,同时外源性流加C14:0脂肪酸,至终浓度为培养液的1‰,继续在30℃条件下振荡培养48h,培养过程中每隔12h外源性流加葡萄糖至终浓度为培养液的1%。培养液在8000rpm条件下,离心10min,并在工作3s、间歇3s、工作70次的条件下进行细胞破碎。取含有烷烃的细胞破碎液保存,为后续检测工作做准备。 Inoculate engineering Escherichia coli plasmid 1/plasmid 3 into 50 mL of LB liquid culture medium (containing 50 μL of ampicillin and 50 μL of chloramphenicol) at a 1% inoculum size, culture at 37°C with shaking at 160 rpm for about 3 hours, when OD 600 At about 0.6, add 0.4mM inducer IPTG to the bacterial solution, and at the same time add C14:0 fatty acid exogenously, until the final concentration is 1‰ of the culture solution, and continue shaking culture at 30°C for 48h. Glucose was added exogenously every 12 hours to a final concentration of 1% of the culture solution. The culture solution was centrifuged at 8000rpm for 10min, and the cells were broken under the conditions of working for 3s, resting for 3s, and working 70 times. Take the cell disruption solution containing alkanes and save it for subsequent detection.
2 中链烷烃的提取 2 Extraction of medium paraffins
取1.5mL细胞破碎液,加入400μL甲基叔丁醚,在振荡仪上振荡1min,并上下颠倒摇匀,充分进行萃取,8000rpm离心2min,分离并收集有机层。这样即可获得一定浓度的中链烷烃。 Take 1.5mL of cell disruption solution, add 400μL of methyl tert-butyl ether, shake on the shaker for 1min, and shake up and down to fully extract, centrifuge at 8000rpm for 2min, separate and collect the organic layer. In this way, a certain concentration of medium-chain alkanes can be obtained. the
3 中链烷烃的气质检测 3 Gas detection of medium paraffins
对甲基叔丁醚萃取的烷烃进行气相色谱-质谱联用检测,气相色谱条件如实施例6所示,结果见图7。从最终气相图谱中可分析得出:质粒1/质粒3重组大肠杆菌所产生的C13/C15的烷烃产量为2.17mg/L。 The alkanes extracted with methyl tert-butyl ether were detected by gas chromatography-mass spectrometry. The gas chromatography conditions are as shown in Example 6, and the results are shown in FIG. 7 . From the analysis of the final gas chromatogram, it can be concluded that the alkane yield of C13/C15 produced by plasmid 1/plasmid 3 recombinant Escherichia coli is 2.17mg/L. the
实施例8 Example 8
外源性流加C16:0脂肪酸生产烷烃 Production of Alkanes by Adding C16:0 Fatty Acids Exogenously
1 中链烷烃的合成 1 Synthesis of medium paraffins
将工程大肠杆菌质粒1/质粒3按1%的接种量接种到50mL LB液体培养液中(内含50μL的氨苄青霉素与50μL的氯霉素),37℃,160rpm振荡培养约 3h,当OD600约为0.6时,在菌液中加入0.4mM诱导剂IPTG,同时外源性流加C16:0脂肪酸,至终浓度为培养液的1‰,继续在30℃条件下振荡培养48h,培养过程中每隔12h外源性流加葡萄糖至终浓度为培养液的1%。培养液在8000rpm条件下,离心10min,并在工作3s、间歇3s、工作70次的条件下进行细胞破碎。取含有烷烃的细胞破碎液保存,为后续检测工作做准备。 Inoculate engineering Escherichia coli plasmid 1/plasmid 3 into 50 mL of LB liquid culture medium (containing 50 μL of ampicillin and 50 μL of chloramphenicol) at a 1% inoculum size, culture at 37°C for about 3 hours with shaking at 160 rpm, and when the OD600 is about When the concentration is 0.6, add 0.4mM inducer IPTG to the bacterial solution, and at the same time add C16:0 fatty acid exogenously, to a final concentration of 1‰ of the culture solution, and continue shaking culture at 30°C for 48h. Glucose was added exogenously every 12 hours to a final concentration of 1% of the culture solution. The culture solution was centrifuged at 8000rpm for 10min, and the cells were broken under the conditions of working for 3s, resting for 3s, and working 70 times. Take the cell disruption solution containing alkanes and save it for subsequent detection. the
2 中链烷烃的提取 2 Extraction of medium paraffins
取1.5mL细胞破碎液,加入400μL甲基叔丁醚,在振荡仪上振荡1min,并上下颠倒摇匀,充分进行萃取,8000rpm离心2min,分离并收集有机层。这样即可获得一定浓度的中链烷烃。 Take 1.5mL of cell disruption solution, add 400μL of methyl tert-butyl ether, shake on the shaker for 1min, and shake up and down to fully extract, centrifuge at 8000rpm for 2min, separate and collect the organic layer. In this way, a certain concentration of medium-chain alkanes can be obtained. the
3 中链烷烃的气质检测 3 Gas detection of medium paraffins
对甲基叔丁醚萃取的烷烃进行气相色谱-质谱联用检测,气相色谱条件如实施例6所示,结果见图8。从最终气相图谱中可分析得出:质粒1/质粒3重组大肠杆菌所产生的C13/C15的烷烃产量为1.81mg/L。 The alkanes extracted with methyl tert-butyl ether were detected by gas chromatography-mass spectrometry. The gas chromatography conditions are as shown in Example 6, and the results are shown in FIG. 8 . From the analysis of the final gas chromatogram, it can be concluded that the alkane yield of C13/C15 produced by plasmid 1/plasmid 3 recombinant Escherichia coli is 1.81 mg/L. the
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