CN103383395B - A liquid chip kit for detecting autoantibodies in lung cancer - Google Patents
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Abstract
Description
技术领域technical field
本发明涉及医药生物领域,尤其涉及一种用于检测肺癌自身抗体的液相芯片试剂盒。The invention relates to the field of medical biology, in particular to a liquid-phase chip kit for detecting autoantibodies of lung cancer.
背景技术Background technique
近年来,我国癌症的发生率呈明显上升趋势,占死亡原因的20%以上,居各类死因之首。世界卫生组织预测,到2020年,将有2000万新发癌症病例,其中死亡人数达1200万,且绝大多数发生在发展中国家。如果不采取任何有效的预防与控制措施,预计到2020年,我国每年的新发生癌症总数和癌症死亡总数将达300万左右,患病总数将达660万。In recent years, the incidence of cancer in my country has shown an obvious upward trend, accounting for more than 20% of the causes of death, ranking first among all causes of death. The World Health Organization predicts that by 2020, there will be 20 million new cancer cases and 12 million deaths, most of which will occur in developing countries. If no effective prevention and control measures are taken, it is estimated that by 2020, the total number of new cancers and cancer deaths in my country will reach about 3 million, and the total number of patients will reach 6.6 million.
肺癌目前是全球范围内发病率和死亡率最高的恶性肿瘤。近20年来,由于大力推行戒烟,欧洲和美国等西方国家男性肺癌的发病率已开始下降,但女性肺癌的发病率却持续上升。我国是香烟生产和销售大国,不论男性还是女性,肺癌的发病率均呈持续上升趋势,尤以女性发病率上升更快。临床研究表明,原位癌治愈率接近100%,Ⅰ期肺癌患者的5年生存率达60%~90%,而IIIb和Ⅳ期患者的5年生存率仅5%~20%,因此,早期诊断早期发现,早期治疗是降低肺癌死亡率,延长生存期的关键。然而,由于缺乏理想的早期诊断方法,肺癌的早期诊断率仅14%左右。因此,如何提高肺癌早期诊断水平已成为肺癌防治工作者面临的严肃而紧迫的任务。Lung cancer is currently the malignant tumor with the highest morbidity and mortality worldwide. In the past 20 years, due to vigorous promotion of smoking cessation, the incidence of male lung cancer in Europe and the United States has begun to decline, but the incidence of female lung cancer has continued to rise. my country is a big country in the production and sales of cigarettes. Regardless of male or female, the incidence of lung cancer continues to rise, especially in females. Clinical studies have shown that the cure rate of carcinoma in situ is close to 100%, and the 5-year survival rate of patients with stage I lung cancer is 60% to 90%, while the 5-year survival rate of patients with stage IIIb and IV is only 5% to 20%. Early diagnosis and early treatment are the key to reducing the mortality rate of lung cancer and prolonging the survival period. However, due to the lack of ideal early diagnosis methods, the early diagnosis rate of lung cancer is only about 14%. Therefore, how to improve the level of early diagnosis of lung cancer has become a serious and urgent task for lung cancer prevention and treatment workers.
血清中的肿瘤抗原等标志物能诱导机体产生自身抗体,在肿瘤发生还未能被临床检查手段检测到的早期,机体免疫系统就可监测到低水平表达的肿瘤抗原的存在,并引发免疫反应,产生大量的抗体,起到有效的生物信号放大作用。Markers such as tumor antigens in the serum can induce the body to produce autoantibodies. In the early stage of tumor occurrence that has not been detected by clinical examination methods, the body's immune system can monitor the existence of tumor antigens expressed at low levels and trigger an immune response , produce a large number of antibodies, and play an effective biological signal amplification role.
对比临床常用的肿瘤标记物蛋白,自身抗体的检测在肿瘤诊断中占极大的优势。第一,可以对肿瘤进行早期诊断,便于早期治疗,提高治愈率。多项研究表明在影像学检查确诊实体癌数月至数年前即可检测到自身抗体的存在,甚至在肿瘤确诊前2-10年就可检测到血清中有针对肿瘤抗原的抗体。第二,自身抗体比相应肿瘤抗原滴度高,针对单一抗原的自身抗体通过免疫反应大量扩增,在血清中大量白蛋白存在干扰的情况下,较其它标志物更易检测到。因此分析肿瘤患者免疫系统的改变,而不是肿瘤蛋白本身成为一个非常重要的研究途径。第三,标本易获得,检测结果相对稳定。肿瘤抗原一旦被分泌入血,可能很快地被降解或清除,而自身抗体不像其它多肽一样易受蛋白酶水解作用,可在相当长一段时间内在血清中稳定、持续存在,并且自身抗体的半衰期很长,大约是7天,每小时的波动很小,理化性质稳定,在-80C长期保存对其活性几乎无影响。第四,其操作所用的试剂和技术简便易行,重复性好,通过常规的酶联免疫吸附试验(ELISA)或酶联免疫分析(EIA)就可以检测。Compared with the commonly used clinical tumor marker proteins, the detection of autoantibodies has a great advantage in tumor diagnosis. First, tumors can be diagnosed early, which facilitates early treatment and improves the cure rate. Many studies have shown that the presence of autoantibodies can be detected months to years before the diagnosis of solid cancer by imaging examinations, and antibodies against tumor antigens can be detected in serum even 2-10 years before the diagnosis of tumors. Second, the titer of autoantibodies is higher than that of the corresponding tumor antigen, and autoantibodies against a single antigen are greatly amplified through immune reactions, and are easier to detect than other markers when there is interference from a large amount of albumin in serum. Therefore, analyzing changes in the immune system of cancer patients, rather than tumor proteins themselves, has become a very important research avenue. Third, the samples are easy to obtain and the test results are relatively stable. Once a tumor antigen is secreted into the blood, it may be degraded or cleared quickly, while autoantibodies are not susceptible to protease hydrolysis like other polypeptides, and can be stable and persistent in serum for a long period of time, and the half-life of autoantibodies It is very long, about 7 days, with little fluctuation per hour, stable physical and chemical properties, and long-term storage at -80C has little effect on its activity. Fourth, the reagents and techniques used in its operation are simple and easy, with good repeatability, and can be detected by conventional enzyme-linked immunosorbent assay (ELISA) or enzyme-linked immunoassay (EIA).
肿瘤发生是一个多基因、多步骤的癌变过程,尽管肿瘤自身抗体是肿瘤诊断的理想候选指标,仅靠一个指标进行诊断,常常会导致假阳性和假阴性,所以,单个肿瘤自身抗体检测必然存在一些局限性,影响肺癌的临床诊断。其一,在特定肿瘤中,单一的肿瘤自身抗体的阳性率通常只有10%,在最理想的肿瘤群体中也仅为20-30%;其二,肿瘤发病中的很多生物途径为多种疾病(包括肿瘤以及其他自身免疫性疾病)所共有,一般情况下,同种肿瘤可异常地产生一种或多种肿瘤自身抗体,而不同肿瘤或同种肿瘤的不同组织类型既可检出共同的肿瘤抗体,也可检出不同的肿瘤抗体。Tumor occurrence is a multi-gene, multi-step cancer process. Although tumor autoantibodies are ideal candidate indicators for tumor diagnosis, relying on only one indicator for diagnosis often leads to false positives and false negatives. Therefore, there must be a single tumor autoantibody detection Some limitations affect the clinical diagnosis of lung cancer. First, in a specific tumor, the positive rate of a single tumor autoantibody is usually only 10%, and in the most ideal tumor population, it is only 20-30%; (including tumors and other autoimmune diseases), in general, the same tumor can abnormally produce one or more tumor autoantibodies, and different tumors or different tissue types of the same tumor can detect common autoantibodies Tumor antibodies, different tumor antibodies can also be detected.
近年来的研究倾向于针对联合抗体谱进行癌症检测。Chapman等运用ELISA对肺癌(包括非小细胞肺癌和小细胞肺癌)患者与正常对照人群血清中针对7种肿瘤抗原(p53、c-myc、HER2、NY-ESO-1、CAGE、MUC1和GBU4-5)的血清抗体进行检测,结果显示单一抗体检出阳性率在5%-36%之间,诊断的特异性达到96%-100%,而7种抗体联合检测的敏感性可达76%,特异性为92%。这充分说明肿瘤标志物的单项检测,特异性较高,但敏感性和准确性较低;联合检测后,虽然特异性有所降低,但敏感性和准确性均有很大的提高。Recent studies have tended to target combined antibody profiles for cancer detection. Chapman et al. used ELISA to detect seven tumor antigens (p53, c-myc, HER2, NY-ESO-1, CAGE, MUC1 and GBU4- 5) Serum antibodies were detected, and the results showed that the positive rate of a single antibody was between 5% and 36%, and the diagnostic specificity reached 96% to 100%, while the sensitivity of the combined detection of 7 antibodies could reach 76%. The specificity was 92%. This fully shows that the single detection of tumor markers has high specificity, but low sensitivity and accuracy; after joint detection, although the specificity has decreased, the sensitivity and accuracy have greatly improved.
因此联合检测多种肿瘤相关的自身抗体,形成肿瘤本身独有的自身抗体“指纹图谱”,将诊断及预后的特异性和敏感性提高到单一个体所无法达到的水平,由于这些自身抗体通常在临床症状前出现,因而具有重要的诊断和预后判断价值。Therefore, the joint detection of various tumor-related autoantibodies forms a unique autoantibody "fingerprint" of the tumor itself, which improves the specificity and sensitivity of diagnosis and prognosis to a level that cannot be achieved by a single individual. Appears before clinical symptoms, so it has important diagnostic and prognostic value.
发明内容Contents of the invention
本发明提供了一种用于检测肺癌自身抗体的液相芯片试剂盒,实现了血清中多种抗体的联合检测,对肺癌的检测准确性高。The invention provides a liquid-phase chip kit for detecting lung cancer autoantibodies, which realizes joint detection of multiple antibodies in serum and has high detection accuracy for lung cancer.
一种用于检测肺癌自身抗体的液相芯片试剂盒,包括偶联抗原蛋白的微球、生物素标记的二抗、链霉亲和素-藻红蛋白、反应缓冲液和稀释缓冲液,抗原蛋白为p62、NY-ESO-1、p53和CAGE,其中,偶联不同抗原蛋白的微球具有不同的颜色编码;二抗为生物素标记的抗人免疫球蛋白G。A liquid chip kit for the detection of lung cancer autoantibodies, including microspheres coupled to antigenic proteins, biotin-labeled secondary antibodies, streptavidin-phycoerythrin, reaction buffer and dilution buffer, antigen The proteins are p62, NY-ESO-1, p53 and CAGE, and the microspheres coupled with different antigen proteins have different color codes; the secondary antibody is biotin-labeled anti-human immunoglobulin G.
CAGE:肿瘤相关基因,属于癌-睾丸(cancer-testis CT)抗原家族成员,是2002年Cho等人采用重组克隆表达抗原的血清学分析技术,筛查睾丸组织cDNA文库时发现的一个新的癌-睾丸抗原编码基因。CAGE: Tumor-associated gene, a member of the cancer-testis CT antigen family, is a new cancer discovered by Cho et al. in 2002 when they screened the cDNA library of testis tissue by using the serological analysis technology of recombinant cloning and expressing antigens. - Genes encoding testis antigens.
p62:核孔蛋白,是相对分子质量约为62×103的1个肿瘤相关抗原,属于胰岛素样生长因子2(IGF2)mRNA结合蛋白家族的一员,又称MP2/IGF2BP2。p62: nucleoporin, a tumor-associated antigen with a relative molecular mass of about 62×103, and a member of the insulin-like growth factor 2 (IGF2) mRNA-binding protein family, also known as MP2/IGF2BP2.
NY-ESO-1:是1997年chen等利用SEREX技术从食管癌cDNA文库中筛选得到的肿瘤抗原,属CTA(cancer-testis antigen)家族,该家族成员只在睾丸组织和一些肿瘤组织中表达。NY-ESO-1: It is a tumor antigen screened from esophageal cancer cDNA library by Chen et al. using SEREX technology in 1997. It belongs to the CTA (cancer-testis antigen) family. Members of this family are only expressed in testis tissue and some tumor tissues.
p53:p53基因是一种抗癌基因,定位于人类染色体17p13.1,编码393个氨基酸组成的分子量为53kD的核内磷酸化蛋白,被称为p53蛋白。p53: The p53 gene is an anti-cancer gene, located on human chromosome 17p13.1, encoding a nuclear phosphorylated protein with a molecular weight of 53kD consisting of 393 amino acids, called p53 protein.
本发明以抗原蛋白p62、NY-ESO-1、p53和CAGE产生的自身抗体作为检测对象,在本发明的液相芯片试剂盒中,抗原蛋白和二抗均能够特异的与相应的肺癌血清中的抗体(p62抗体、NY-ESO-1抗体、p53抗体或CAGE抗体)结合,而链霉亲和素-藻红蛋白能够与生物素高度特异性的结合,因此,最终可以形成针对肺癌血清抗体的“微球-抗原蛋白+血清抗体+二抗+链霉亲和素-藻红蛋白”复合物,通过仪器检测,根据微球色彩不同确定反应类型,以绿色激光激发藻红蛋白,测定微球上结合的报告荧光分子的数量,用于间接确定微球上结合的肺癌血清抗体的含量。In the present invention, the autoantibodies produced by antigenic proteins p62, NY-ESO-1, p53 and CAGE are used as detection objects. In the liquid phase chip kit of the present invention, both the antigenic proteins and the secondary antibodies can be specifically compared with the corresponding lung cancer serum. Antibodies (p62 antibody, NY-ESO-1 antibody, p53 antibody or CAGE antibody), and streptavidin-phycoerythrin can bind to biotin with high specificity, so serum antibodies against lung cancer can be finally formed The complex of "microsphere-antigen protein + serum antibody + secondary antibody + streptavidin-phycoerythrin" is detected by the instrument, and the reaction type is determined according to the color of the microsphere, and the phycoerythrin is excited by a green laser to measure the microsphere The number of reporter fluorescent molecules bound on the ball is used to indirectly determine the content of lung cancer serum antibody bound on the microsphere.
所述的反应缓冲液可以为1%PBSB。The reaction buffer can be 1% PBSB.
所述稀释缓冲液可以为1%PBSB。The dilution buffer can be 1% PBSB.
所述抗原蛋白为p62、NY-ESO-1、p53和CAGE。The antigen proteins are p62, NY-ESO-1, p53 and CAGE.
所述抗原蛋白可通过HaloTagTM可互换标记技术与微球进行连接。The antigenic protein can be connected with microspheres through HaloTag TM interchangeable labeling technology.
p62蛋白的氨基酸序列如SEQ ID NO.5所示;编码p62蛋白的基因序列如SEQ ID NO.1所示;NY-ESO-1蛋白的氨基酸序列如SEQ ID NO.6所示,编码NY-ESO-1蛋白的基因序列如SEQ ID NO.2所示;p53蛋白的氨基酸序列如SEQ ID NO.7所示,编码p53蛋白的基因序列如SEQ ID NO.3所示;CAGE蛋白的氨基酸序列如SEQ ID NO.8所示;,编码CAGE蛋白的基因序列如SEQ ID NO.4所示。The amino acid sequence of p62 protein is shown in SEQ ID NO.5; the gene sequence encoding p62 protein is shown in SEQ ID NO.1; the amino acid sequence of NY-ESO-1 protein is shown in SEQ ID NO.6, encoding NY- The gene sequence of ESO-1 protein is shown in SEQ ID NO.2; the amino acid sequence of p53 protein is shown in SEQ ID NO.7, and the gene sequence encoding p53 protein is shown in SEQ ID NO.3; the amino acid sequence of CAGE protein As shown in SEQ ID NO.8; The gene sequence encoding CAGE protein is shown in SEQ ID NO.4.
优选的,所述二抗为羊抗人免疫球蛋白G,实验发现鼠源抗体会产生交叉反应,而羊源的抗体则能够克服该缺陷。Preferably, the secondary antibody is goat anti-human immunoglobulin G. Experiments have found that murine antibodies can produce cross-reactions, while goat-derived antibodies can overcome this defect.
所述微球可采用常规的液相芯片用的微球即可。The microspheres can be conventional microspheres used in liquid phase chips.
制备偶联抗原蛋白的微球时,抗原蛋白的加入量为5~10μg/6.25×106个微球,优选为6.25μg/6.25×106个微球。When preparing microspheres coupled with antigenic protein, the amount of antigenic protein added is 5-10 μg/6.25×10 6 microspheres, preferably 6.25 μg/6.25×10 6 microspheres.
每种偶联抗原蛋白的微球的浓度为1.2~1.8×104个/μl,优选为1.2×104个/μl。The concentration of each antigen protein-coupled microsphere is 1.2-1.8×10 4 /μl, preferably 1.2×10 4 /μl.
生物素标记的二抗的浓度为0.1~0.125μg/ml,优选为0.1μg/ml。The concentration of the biotin-labeled secondary antibody is 0.1-0.125 μg/ml, preferably 0.1 μg/ml.
与现有技术相比,本发明的有益效果为:Compared with prior art, the beneficial effect of the present invention is:
本发明用于检测肺癌自身抗体的液相芯片试剂盒,实现了对血清中四种抗体的联合检测,且以血清中的p62抗体、NY-ESO-1抗体、p53抗体和CAGE抗体为标志,检测准确性高,为肺癌的诊断和预后提供了新的工具和思路。The liquid phase chip kit for detecting lung cancer autoantibodies of the present invention realizes the joint detection of four antibodies in serum, and is marked by p62 antibody, NY-ESO-1 antibody, p53 antibody and CAGE antibody in serum, The detection accuracy is high, which provides new tools and ideas for the diagnosis and prognosis of lung cancer.
本发明用于检测肺癌自身抗体的液相芯片试剂盒基于液相芯片的技术平台,能够高通量的对微量样本进行快速的检测,液相环境更有利于保持蛋白质的天然构象,也更有利于反应进行,灵敏度高,信噪比好。The liquid phase chip kit for detecting lung cancer autoantibodies of the present invention is based on the technical platform of the liquid phase chip, which can quickly detect micro samples with high throughput, and the liquid phase environment is more conducive to maintaining the natural conformation of the protein, and is more efficient Facilitate the reaction, high sensitivity, good signal-to-noise ratio.
附图说明Description of drawings
图1为肺癌患者以及健康对照中的单分子自身抗体的分布;Figure 1 is the distribution of monomolecular autoantibodies in lung cancer patients and healthy controls;
图2为3种生物统计学算法(CCP,DLDA,BCCP)分析本发明液相芯片试剂盒检测的准确性。Fig. 2 shows the detection accuracy of the liquid phase chip kit of the present invention analyzed by three biostatistical algorithms (CCP, DLDA, BCCP).
具体实施方式Detailed ways
下面结合具体实施例对本发明作进一步阐释。The present invention will be further explained below in conjunction with specific examples.
实施例1液相芯片试剂盒的制备The preparation of embodiment 1 liquid phase chip kit
试剂和溶液Reagents and Solutions
(1)0.1M NaH2PO4,pH6.2:称量3.5814g NaH2PO4于90mL ddH2O中,NaOH调节pH至6.2后,定容至100mL,0.22um滤膜过滤;(1) 0.1M NaH 2 PO 4 , pH6.2: Weigh 3.5814g NaH 2 PO 4 in 90mL ddH 2 O, adjust the pH to 6.2 with NaOH, dilute to 100mL, and filter through a 0.22um filter;
(2)0.05M MES,pH5.0:称量0.976g MES于90mL ddH2O中,NaOH调节pH至5.0后,定容至100mL,0.22um滤膜过滤;(2) 0.05M MES, pH5.0: Weigh 0.976g MES into 90mL ddH 2 O, adjust the pH to 5.0 with NaOH, dilute to 100mL, filter with 0.22um membrane;
(3)0.1M MES(2-(N-吗啉代)乙磺酸),pH6.0:称量1.952g MES于90mL ddH2O中,NaOH调节pH至6.0后,定容至100mL,0.22um滤膜过滤;(3) 0.1M MES (2-(N-morpholino)ethanesulfonic acid), pH6.0: Weigh 1.952g MES in 90mL ddH 2 O, adjust the pH to 6.0 with NaOH, then dilute to 100mL, 0.22 um membrane filtration;
(4)0.1M MES,pH4.5:称量1.952g MES于90mL ddH2O中,NaOH调节pH至4.5后,定容至100mL,0.22um滤膜过滤;(4) 0.1M MES, pH4.5: Weigh 1.952g MES into 90mL ddH 2 O, adjust the pH to 4.5 with NaOH, dilute to 100mL, and filter through a 0.22um membrane;
(5)PBS:NaCl,137mM;KCl,2.7mM;Na2HPO4,8.1mM;KH2PO4,1.5mM;pH7.2-7.4,0.22um滤膜过滤;(5) PBS: NaCl, 137mM; KCl, 2.7mM; Na 2 HPO 4 , 8.1mM; KH 2 PO 4 , 1.5mM; pH7.2-7.4, 0.22um membrane filtration;
(6)1%PBSB:0.1%PBS中含0.02%Proclin300,0.22um滤膜过滤;(6) 1%PBSB: 0.1%PBS containing 0.02%Proclin300, 0.22um membrane filtration;
(7)0.1%PBST:0.1%PBS中含0.1%tween-20,0.22um滤膜过滤;(7) 0.1%PBST: 0.1%PBS contains 0.1%tween-20, filtered by 0.22um filter membrane;
(8)1-乙基-(3-二甲基氨基丙基)碳酰二亚胺盐酸盐(EDC);(8) 1-ethyl-(3-dimethylaminopropyl)carbodiimide hydrochloride (EDC);
(9)N-羟基硫代琥珀酰亚胺(S-NHS)。(9) N-hydroxysulfosuccinimide (S-NHS).
1、用于检测自身抗体的液相芯片试剂盒,包括有:1. Liquid phase chip kit for detecting autoantibodies, including:
1)偶联有Halo amine(O2)ligand的55#、47#、27#、33#微球;1) 55#, 47#, 27#, 33# microspheres coupled with Halo amine (O2) ligand;
2)含Halo Tag的融合蛋白:p62、NY-ESO-1、p53、CAGE;2) Fusion proteins containing Halo Tag: p62, NY-ESO-1, p53, CAGE;
3)链霉亲和素-藻红蛋白;3) streptavidin-phycoerythrin;
4)羊抗人IgG-生物素:浓度为0.1μg/ml;4) Goat anti-human IgG-biotin: the concentration is 0.1 μg/ml;
5)反应缓冲液:1%PBSB;5) Reaction buffer: 1% PBSB;
6)稀释缓冲液:1%PBSB;6) Dilution buffer: 1% PBSB;
7)封口膜;7) Parafilm;
8)96孔板。8) 96-well plate.
制备上述液相芯片试剂盒,包括如下步骤:The preparation of the liquid phase chip kit includes the following steps:
1、重组蛋白诱导表达与纯化1. Induced expression and purification of recombinant protein
试剂和溶液:Reagents and solutions:
KRX重组菌(分别含有如SEQ ID NO.1~4所示的基因,-80℃保存)KRX recombinant bacteria (respectively containing the genes shown in SEQ ID NO.1-4, stored at -80°C)
酵母粉(OXOID)Yeast powder (OXOID)
蛋白胨(OXOID)Peptone (OXOID)
Halo tag protein purfication resins(Promega)Halo tag protein purification resins (Promega)
Protease inhibitor(Roche)Protease inhibitor (Roche)
Lysozyme(TOPBIO)Lysozyme (TOPBIO)
DNase IDNase I
TEV protease(Promega)TEV protease (Promega)
His link树脂(Promega)His link resin (Promega)
纯化柱(BIO-RAD)Purification column (BIO-RAD)
CA-630(Sigma)CA-630 (Sigma)
LB培养基(10.0g蛋白胨,5.0g酵母粉,5.0gNaCl,调PH至7.0~7.5定容至1L,120°高压灭菌20min)LB medium (10.0g peptone, 5.0g yeast powder, 5.0gNaCl, adjust the pH to 7.0-7.5 and set the volume to 1L, autoclave at 120° for 20min)
缓冲液1(50mM Hepes,PH7.5,150mM NaCl,1mM DTT)Buffer 1 (50mM Hepes, pH7.5, 150mM NaCl, 1mM DTT)
缓冲液2(50mM Hepes,PH7.5,150mM NaCl,1mM DTT,0.5mMEDTA,0.05%CA630)Buffer 2 (50mM Hepes, pH7.5, 150mM NaCl, 1mM DTT, 0.5mM EDTA, 0.05%CA630)
实验步骤:Experimental steps:
一、重组菌大量诱导表达1. Large-scale induced expression of recombinant bacteria
1、过夜扩增1. Overnight amplification
从-80度冰箱拿出保存的KRX重组菌,加入到10ml含有0.2%葡萄糖的氨苄抗性LB培养基中,37℃275rpm过夜扩增。Take out the preserved KRX recombinant bacteria from the -80°C refrigerator, add it to 10ml of ampicillin-resistant LB medium containing 0.2% glucose, and amplify overnight at 37°C and 275rpm.
2、扩大培养2. Expand training
将过夜的菌体按照1:100加入到1L含有氨苄抗性的LB培养基中37℃275rpm培养至OD=0.4-0,5,培养基中加入终浓度为0.05%的葡萄糖和鼠李糖,25℃225rpm培养过夜。Add the overnight bacterial cells to 1L ampicillin-resistant LB medium at a ratio of 1:100 and culture at 275rpm at 37°C to OD=0.4-0,5, and add glucose and rhamnose at a final concentration of 0.05% to the medium. Cultivate overnight at 25°C and 225rpm.
3、5000g离心15min收集菌体,100ml/管,做好标记置于-80°保存。3. Centrifuge at 5000g for 15 minutes to collect bacteria, 100ml/tube, mark and store at -80°.
二、KRX重组菌细胞裂解2. Cell lysis of KRX recombinant bacteria
1、取1管-80°冻存的KRX重组菌,加入15ml缓冲液1重悬后分别加入100ul Protease inhibitor、10ul Lysozyme(100mg/ml)、10ul DNase I(5mg/ml)、100ul1%CA-630;重悬菌体,混匀后冰浴放置30min。1. Take 1 tube of KRX recombinant bacteria frozen at -80°, add 15ml buffer 1 to resuspend, then add 100ul Protease inhibitor, 10ul Lysozyme (100mg/ml), 10ul DNase I (5mg/ml), 100ul1%CA- 630; resuspend the bacteria, mix well and place in ice bath for 30min.
2、超声破碎菌体(超5s,停10s,85%功率,3min),冰上放置10min。2. Ultrasonic disrupt the bacteria (over 5s, stop for 10s, 85% power, 3min), place on ice for 10min.
3、12000g,4°离心30min,取上清,取100ul上清到1.5ml离心管中(其中50ul标记为S,另外50ul+10ul1:100稀释的TEV酶标记为S-TEV)。3. Centrifuge at 12000g at 4° for 30min, take the supernatant, and put 100ul of the supernatant into a 1.5ml centrifuge tube (50ul of which is marked as S, and the other 50ul+10ul of 1:100 diluted TEV enzyme is marked as S-TEV).
4、离心同时清洗Halo link:分别取1管2ml的Halo link beads,3300rpm离心5min弃上清,加入2ml洗涤缓冲液到beads中混匀后3300rpm离心5min弃上清,重复洗涤2次。4. Centrifuge and wash Halo link at the same time: take 1 tube of 2ml Halo link beads, centrifuge at 3300rpm for 5min, discard the supernatant, add 2ml washing buffer to the beads, mix well, centrifuge at 3300rpm for 5min, discard the supernatant, and repeat washing twice.
5、将清洗完毕的Halo link加入到离心的菌液上清中,室温混匀孵育结合2小时。5. Add the washed Halo link to the supernatant of the centrifuged bacterial liquid, mix and incubate at room temperature for 2 hours.
6、将上述混合液加入到纯化柱中重力过柱,收集滤液100ul(FT);然后加入洗涤缓冲液10ml,重悬后室温混匀孵育10min,后弃滤液,重复洗涤4次。6. Add the above mixture to the purification column and pass through the column by gravity, collect the filtrate 100ul (FT); then add 10ml of washing buffer, resuspend, mix and incubate at room temperature for 10min, discard the filtrate, and repeat washing 4 times.
7、关闭纯化柱,加入3ml的洗涤缓冲液,放1ml后关闭加入5ul TEV酶后封闭纯化柱,37°反应1h。7. Close the purification column, add 3ml of washing buffer, put 1ml, close the purification column after adding 5ul TEV enzyme, and react at 37° for 1h.
8、过柱收集滤液(E1-1),加入2ml纯化缓冲液到柱子中,封柱混匀10min,过滤收集滤液标记为(E1-2),后加入10ul His link树脂到混合均匀的E1-1和E1-2中,室温孵育1h,1000g离心收集上清标记为E2。8. Collect the filtrate (E1-1) through the column, add 2ml of purification buffer to the column, seal the column and mix for 10min, filter and collect the filtrate as (E1-2), then add 10ul His link resin to the well-mixed E1- 1 and E1-2, incubate at room temperature for 1 h, centrifuge at 1000 g to collect the supernatant and mark it as E2.
2、蛋白与微球偶联2. Coupling of proteins and microspheres
将纯化的p62、NY-ESO-1、p53、CAGE重组蛋白分别与55#、47#、27#、33#微球偶联。The purified p62, NY-ESO-1, p53, and CAGE recombinant proteins were coupled to 55#, 47#, 27#, and 33# microspheres, respectively.
试剂和溶液:Reagents and solutions:
(1)0.1M NaH2PO4,pH6.2:称量3.5814g NaH2PO4于90mL ddH2O中,NaOH调节pH至6.2后,定容至100mL,0.22um滤膜过滤;(1) 0.1M NaH 2 PO 4 , pH6.2: Weigh 3.5814g NaH 2 PO 4 in 90mL ddH 2 O, adjust the pH to 6.2 with NaOH, dilute to 100mL, and filter through a 0.22um filter;
(2)0.05M MES,pH5.0:称量0.976g MES于90mL ddH2O中,NaOH调节pH至5.0后,定容至100mL,0.22um滤膜过滤;(2) 0.05M MES, pH5.0: Weigh 0.976g MES into 90mL ddH 2 O, adjust the pH to 5.0 with NaOH, dilute to 100mL, filter with 0.22um membrane;
(3)0.1M MES(2-(N-吗啉代)乙磺酸),pH6.0:称量1.952g MES于90mL ddH2O中,NaOH调节pH至6.0后,定容至100mL,0.22um滤膜过滤;(3) 0.1M MES (2-(N-morpholino)ethanesulfonic acid), pH6.0: Weigh 1.952g MES in 90mL ddH 2 O, adjust the pH to 6.0 with NaOH, then dilute to 100mL, 0.22 um membrane filtration;
(4)0.1M MES,pH4.5:称量1.952g MES于90mL ddH2O中,NaOH调节pH至4.5后,定容至100mL,0.22um滤膜过滤;(4) 0.1M MES, pH4.5: Weigh 1.952g MES into 90mL ddH 2 O, adjust the pH to 4.5 with NaOH, dilute to 100mL, and filter through a 0.22um membrane;
(5)PBS:NaCl,137mM;KCl,2.7mM;Na2HPO4,8.1mM;KH2PO4,1.5mM;pH7.2-7.4,0.22um滤膜过滤;(5) PBS: NaCl, 137mM; KCl, 2.7mM; Na 2 HPO 4 , 8.1mM; KH 2 PO 4 , 1.5mM; pH7.2-7.4, 0.22um membrane filtration;
(6)1%PBSB:0.1%PBS中含0.02%Proclin300,0.22um滤膜过滤;(6) 1%PBSB: 0.1%PBS containing 0.02%Proclin300, 0.22um membrane filtration;
(7)0.1%PBST:0.1%PBS中含0.1%tween-20,0.22um滤膜过滤;(7) 0.1%PBST: 0.1%PBS contains 0.1%tween-20, filtered by 0.22um filter membrane;
(8)1-乙基-(3-二甲基氨基丙基)碳二亚胺(EDC)(8) 1-ethyl-(3-dimethylaminopropyl) carbodiimide (EDC)
(9)N-羟基硫代琥珀酰亚胺(S-NHS)。(9) N-hydroxysulfosuccinimide (S-NHS).
实验步骤:Experimental steps:
(1)取出微球原液,涡旋20s,超声20s,取50ul(约6.25×106个微球)于Axygen EP管中(标记微球型号和名称),14000x g,4mins;(1) Take out the microsphere stock solution, vortex for 20s, sonicate for 20s, take 50ul (about 6.25× 106 microspheres) into an Axygen EP tube (mark the microsphere model and name), 14000x g, 4mins;
(2)14000g,RT(室温),4min;(2) 14000g, RT (room temperature), 4min;
(3)小心吸去上清,为减少损失可残留少量上清;(3) Carefully suck off the supernatant, and a small amount of supernatant can be left to reduce loss;
(4)加入100ul dH2O,分别涡旋和超声约20s;(4) Add 100ul dH 2 O, vortex and sonicate for about 20s;
(5)14000g,RT,4min;(5) 14000g, RT, 4min;
(6)小心吸去上清,为减少损失可残留少量上清,加入80ul0.1MNaH2PO4,pH6.2,分别涡旋和超声约20s;(6) Carefully suck off the supernatant. In order to reduce the loss, a small amount of supernatant can be left, add 80ul 0.1M NaH 2 PO 4 , pH 6.2, vortex and sonicate for about 20s;
(7)迅速加入10ul S-NHS(ddH2O溶解至50mg/mL),涡旋混匀;(7) Quickly add 10ul S-NHS (ddH 2 O dissolved to 50mg/mL), vortex and mix;
(8)迅速加入10ul EDC(ddH2O溶解至50mg/mL),分别涡旋和超声约20s;(8) Quickly add 10ul EDC (ddH 2 O dissolved to 50mg/mL), vortex and sonicate for about 20s respectively;
(9)RT,避光旋转孵育20min(每隔10min涡旋一次);(9) RT, incubate in the dark for 20 minutes (vortex every 10 minutes);
(10)14000g,RT,4min;(10) 14000g, RT, 4min;
(11)小心吸去上清,加入0.05M MES,pH5.0至125μL,分别涡旋和超声约20s;(11) Carefully suck off the supernatant, add 0.05M MES, pH 5.0 to 125μL, vortex and sonicate for about 20s;
(12)14000g,RT,4min;(12) 14000g, RT, 4min;
(13)小心吸去上清,重复上述洗涤步骤一次;(13) Carefully suck off the supernatant, and repeat the above washing steps once;
(14)小心吸去上清,用12.5ul 0.05M MES,pH5.0重悬微球,分别涡旋和超声约20s;(14) Carefully suck off the supernatant, resuspend the microspheres with 12.5ul 0.05M MES, pH 5.0, vortex and sonicate for about 20s;
(15)加6.25ug实施步骤1纯化得到的蛋白于上述微球中,至终体积为250ul 0.05M MES,pH5.0,分别涡旋约20s;(15) Add 6.25ug of the protein purified in Step 1 to the above-mentioned microspheres to a final volume of 250ul 0.05M MES, pH 5.0, and vortex for about 20s;
(16)RT,避光旋转孵育2h;(16) RT, incubate for 2 hours in the dark;
(17)14000g,RT,4min;(17) 14000g, RT, 4min;
(18)小心吸去上清,加入1mL0.01%PBST,分别涡旋和超声约20s;(18) Carefully suck off the supernatant, add 1mL0.01%PBST, vortex and sonicate for about 20s;
(19)14000g,RT,4min;(19) 14000g, RT, 4min;
(20)小心吸去上清,重复上述洗涤步骤一次;(20) Carefully suck off the supernatant, and repeat the above washing steps once;
(21)加入1mL1%PBSB,分别涡旋和超声约20s;(21) Add 1mL1%PBSB, vortex and sonicate for about 20s;
(22)RT,避光旋转孵育30min,封闭微球表面残余的活化羧基位点;(22) RT, incubate in the dark for 30 minutes, and block the remaining activated carboxyl sites on the surface of the microspheres;
(23)14000g,RT,4min;(23) 14000g, RT, 4min;
(24)小心吸去上清,加入1mL1%PBSB,分别涡旋和超声约20s;(24) Carefully suck off the supernatant, add 1mL1%PBSB, vortex and sonicate for about 20s;
(25)小心吸去上清,加入1%PBSB至终体积为37ul,分别涡旋和超声约20s;(25) Carefully suck off the supernatant, add 1% PBSB to a final volume of 37ul, vortex and sonicate for about 20s;
(26)取2ul于38ul1%PBSB中,涡旋20s,超声20s后,血球计数板计数,最终浓度(个/mL)。(26) Take 2 ul in 38 ul of 1% PBSB, vortex for 20 s, and after ultrasonication for 20 s, count on a hemocytometer, the final concentration (unit/mL).
(27)在Axygen离心管上标记微球浓度(1.2×104个/μl)、偶联时间,然后放置4度避光保存。(27) Mark the microsphere concentration (1.2×10 4 /μl) and coupling time on the Axygen centrifuge tube, and then store it at 4 degrees in the dark.
实施例2肺癌检测试验Example 2 Lung cancer detection test
1、检测方法1. Detection method
(1)使用前先取出所有试剂,放置平衡至室温;(1) Take out all the reagents before use, and let them equilibrate to room temperature;
(2)-80℃取出患者(患肺癌)和健康人的血清,分别放置在冰上融化后,涡旋混匀,取V型96孔血凝板(96孔板)将血清稀释200倍,枪头上下混匀,尽量不产生气泡;(2) Take out the serum of patients (suffering from lung cancer) and healthy people at -80°C, put them on ice to melt, vortex and mix well, take V-type 96-well hemagglutination plate (96-well plate) and dilute the serum by 200 times, Mix the tip of the pipette up and down, try not to generate air bubbles;
(3)取实施例1中的4种偶连抗原蛋白的微球,涡旋混匀20s,超声20s,按每孔2500个取适量于1000ul1%PBSB中,涡旋混匀20s,超声20s,终体积为10ul/孔;(3) Take the four kinds of microspheres coupled with antigenic protein in Example 1, vortex and mix for 20 s, sonicate for 20 s, take an appropriate amount according to 2500 microspheres per well, and put it in 1000 ul1% PBSB, vortex and mix for 20 s, sonicate for 20 s, The final volume is 10ul/well;
(5)打开洗板机---Prime----rinse(channel2)----Prime---放置96孔板---Run5:MAGX3;(5) Turn on the plate washer---Prime----rinse (channel2)----Prime---place the 96-well plate---Run5: MAGX3;
(6)立即加入稀释200倍的血清,30ul/孔;(6) Immediately add serum diluted 200 times, 30ul/well;
(7)用铝箔纸包好96孔板,室温,震荡孵育反应60min;(7) Wrap the 96-well plate with aluminum foil, and incubate with shaking for 60 minutes at room temperature;
(8)0.1%PBST洗三次,Run5:MAGX3;(8) Wash three times with 0.1% PBST, Run5: MAGX3;
(9)1%PBSB稀释羊抗人IgG-生物素(1:5000)和SAPE(1:500),50ul/孔;(9) Dilute goat anti-human IgG-biotin (1:5000) and SAPE (1:500) in 1% PBSB, 50ul/well;
(10)用铝箔纸包好96孔板,室温,震荡孵育反应60min;(10) Wrap the 96-well plate with aluminum foil, and incubate with shaking for 60 minutes at room temperature;
(11)1%PBST洗三次,Run5:MAGX3;(11) Wash three times with 1% PBST, Run5: MAGX3;
(12)100ul/孔1%PBSB重悬微球,室温,震荡3-5min;(12) 100ul/well 1%PBSB resuspended microspheres, room temperature, shaking for 3-5min;
(13)于Luminex系列液相芯片分析仪上读取结果,仪器可自动绘制标准曲线,并计算出待测样本的测值。(13) Read the results on the Luminex series liquid chip analyzer, the instrument can automatically draw the standard curve, and calculate the measured value of the sample to be tested.
2、结果分析2. Result analysis
图1显示了48个早期肺癌以及48个健康对照中的单分子自身抗体的分布。Figure 1 shows the distribution of monomolecular autoantibodies in 48 early-stage lung cancers and 48 healthy controls.
利用3种生物统计学常用的算法(CCP,DLDA,BCCP)分析,发现通过检测自身产生中的p62抗体、NY-ESO-1抗体、p53抗体和CAGE抗体,准确率可达72%。Using 3 commonly used biostatistical algorithms (CCP, DLDA, BCCP) to analyze, it is found that the accuracy rate can reach 72% by detecting the p62 antibody, NY-ESO-1 antibody, p53 antibody and CAGE antibody produced by itself.
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