CN102747139B - Detection kit for Bacillus cereus, Enterobacter sakazakii and staphylococcus aureus, and detection method thereof - Google Patents
Detection kit for Bacillus cereus, Enterobacter sakazakii and staphylococcus aureus, and detection method thereof Download PDFInfo
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Abstract
本发明适用于微生物技术领域,提供了一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒及检测方法。该试剂盒包括DNA提取液、PCR反应液。本发明蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒及检测方法能同时检测蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,与传统的培养法相比具有快速、灵敏、安全等优点,可应用于蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的检测。
The invention is applicable to the technical field of microorganisms, and provides a detection kit and a detection method for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus. The kit includes DNA extraction solution and PCR reaction solution. The detection kit and detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus of the present invention can detect Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus at the same time, and compared with the traditional culture method, it has rapid and sensitive , safety and other advantages, can be applied to the detection of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
Description
技术领域 technical field
本发明属于微生物技术领域,尤其涉及一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒及检测方法。The invention belongs to the technical field of microorganisms, and in particular relates to a detection kit and a detection method for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
背景技术 Background technique
蜡样芽胞杆菌是一种杆状、产生芽孢的革兰氏阳性细菌,由于蜡样芽胞杆菌自然界分布甚广,常存在于土壤、飞尘、腐草和空气中,极易在食品加工、运输、存储、销售过程中,通过苍蝇、蟑螂等昆虫和不卫生的用具和手污染。在临床上可导致脓肿、脑膜炎、骨髓炎、心内膜炎等报道,但最常见的是导致不同类型的食物中毒:腹泻型和呕吐型。阪崎肠杆菌(又称阪崎氏肠杆菌)是肠杆菌科的一种,1980年由黄色阴沟肠杆菌更名为阪崎肠杆菌。阪崎肠杆菌能引起严重的新生儿脑膜炎、小肠结肠炎和茵血症,死亡率高达50%以上。金黄色葡萄球菌是人类的一种重要病原菌,隶属于葡萄球菌属,有“嗜肉菌″的别称,是革兰氏阳性菌的代表。金黄色葡萄球菌致病力强弱主要取决于其产生的侵袭性酶和毒素,可引起局部化脓感染,也可引起肺炎、伪膜性肠炎、心包炎等,甚至败血症、脓毒症等全身感染,中毒症状严重,主要表现为呕吐、发热、腹泻。Bacillus cereus is a rod-shaped, spore-producing Gram-positive bacterium. Because Bacillus cereus is widely distributed in nature, it often exists in soil, fly ash, rotten grass and air, and is very easy to be used in food processing and transportation. , storage, sales process, through flies, cockroaches and other insects and unhygienic utensils and hand pollution. It can lead to abscess, meningitis, osteomyelitis, endocarditis, etc. in clinical reports, but most commonly it causes different types of food poisoning: diarrhea type and vomiting type. Enterobacter sakazakii (also known as Enterobacter sakazakii) is a type of Enterobacteriaceae, which was renamed Enterobacter sakazakii from Enterobacter cloacae in 1980. Enterobacter sakazakii can cause severe neonatal meningitis, enterocolitis and bacteremia, and the mortality rate is as high as 50%. Staphylococcus aureus is an important pathogenic bacterium of humans, which belongs to the genus Staphylococcus, has another name of "fleshophilus", and is a representative of Gram-positive bacteria. The pathogenicity of Staphylococcus aureus mainly depends on the invasive enzymes and toxins it produces, which can cause local suppurative infection, pneumonia, pseudomembranous enteritis, pericarditis, etc., and even systemic infection such as sepsis and sepsis , The symptoms of poisoning are severe, mainly manifested as vomiting, fever, and diarrhea.
国际上通用的金黄色葡萄球菌采用培养检测如下:The internationally accepted Staphylococcus aureus is cultured and detected as follows:
(1)样品处理:无菌取25g或25mL食品样品,放入225mL灭菌生理盐水中均质,制成10-1稀释液。(1) Sample treatment: Aseptically take 25g or 25mL food samples, put them into 225mL sterilized normal saline for homogenization, and make a 10-1 dilution.
(2)增菌培养:将10-1稀释液接入7.5%NaCl肉汤或胰蛋白胨肉汤中,37℃培养24小时。(2) Bacterial enrichment culture: Add the 10-1 dilution into 7.5% NaCl broth or tryptone broth, and incubate at 37°C for 24 hours.
(3)分离培养:将上述稀释液或培养液分别划线血平板和Baird-Parker平板,置37℃培养24~48小时。金黄色葡萄球菌在血平板上呈金黄或白色菌落,大而凸起,表面光滑,周围有溶血圈。在Baird-Parker平板上菌落为圆形,直径2~3mm,颜色灰或黑色,周围有一浑浊带。(3) Separation and culture: Streak the blood plate and Baird-Parker plate with the above dilution or culture solution, respectively, and culture at 37°C for 24-48 hours. Staphylococcus aureus is a golden or white colony on the blood plate, which is large and raised, with a smooth surface and a hemolytic ring around it. On the Baird-Parker plate, the colony is round, 2-3mm in diameter, gray or black in color, surrounded by a turbid zone.
(4)染色观察:从平板上挑取可疑性菌落进行革兰氏染色,金黄色葡萄球菌为革兰氏阳性,显微镜下呈葡萄状排列无芽胞、荚膜,直径0.5~1μm。(4) Staining observation: Pick suspicious colonies from the plate for Gram staining. Staphylococcus aureus is Gram-positive, arranged in a grape shape under the microscope without spores and capsules, with a diameter of 0.5-1 μm.
(5)血浆凝固酶试验:吸取0.5mL兔血浆与0.5mL金黄色葡萄球菌肉浸液肉汤24小时培养物充分混匀,置36±1℃培养,每隔半小时观察一次,连续观察6小时,出现凝固,即将小试管倾斜或倒置时,内容物不流动,判为阳性。同时做阴阳性对照。(5) Plasma coagulase test: Take 0.5mL of rabbit plasma and 0.5mL of Staphylococcus aureus meat infusion broth for 24 hours and mix well, culture at 36±1°C, observe once every half hour, and observe continuously for 6 Hours, coagulation occurs, that is, when the small test tube is tilted or inverted, the content does not flow, and it is judged positive. At the same time do negative and positive controls.
(6)耐热核酸酶试验(6) Thermostable nuclease test
将24小时肉汤培养物沸水浴处理15min,用接种环划线刺种于甲苯胺兰-DNA平板,36±1℃培养24小时,在刺种线周围出现淡粉色者为阳性。本试验金黄色葡萄球菌为阳性。Treat the 24-hour broth culture in a boiling water bath for 15 minutes, inoculate it on a toluidine blue-DNA plate with an inoculation loop, and incubate at 36±1°C for 24 hours. If a light pink color appears around the inoculation line, it is positive. Staphylococcus aureus was positive in this test.
阪崎肠杆菌采用培养法检测如下:Enterobacter sakazakii was detected by culture method as follows:
(1)前增菌和增菌(1) Pre-enrichment and enrichment
取检样100g(mL)加入已预热至44℃装有900mL缓冲蛋白胨水的锥形瓶中,用手缓缓地摇动至充分溶解,36℃±1℃培养18h±2h。移取1mL转种于10mL ST-Vm肉汤,44℃±0.5℃培养24h±2h。Take 100g (mL) of the test sample and add it to a Erlenmeyer flask filled with 900mL buffered peptone water preheated to 44°C, shake slowly by hand until fully dissolved, and incubate at 36°C±1°C for 18h±2h. Transfer 1mL to 10mL ST-Vm broth and incubate at 44°C±0.5°C for 24h±2h.
(2)分离(2) Separation
轻轻混匀mLST-Vm肉汤培养物,各取增菌培养物1环,分别划线接种于两个阪崎肠杆菌显色培养基平板,36℃±1℃培养24h±2h。挑取1个~5个可疑菌落,划线接种于TSA平板。25℃±1℃培养48h±4h。Gently mix the mLST-Vm broth culture, take 1 ring of the enrichment culture, streak inoculate on two Enterobacter sakazakii chromogenic medium plates, and incubate at 36°C±1°C for 24h±2h. Pick 1 to 5 suspicious colonies and inoculate them on TSA plates. Incubate at 25°C±1°C for 48h±4h.
(3)鉴定(3) Identification
自TSA平板上直接挑取黄色可疑菌落,进行生化鉴定。可选择生化鉴定试剂盒或全自动微生物生化鉴定系统。Pick yellow suspicious colonies directly from the TSA plate for biochemical identification. You can choose biochemical identification kit or automatic microbial biochemical identification system.
(4)结果与报告(4) Results and reports
综合菌落形态和生化特征,报告每100g(mL)样品中检出或未检出阪崎肠杆菌。Based on the colony morphology and biochemical characteristics, it is reported that Enterobacter sakazakii was detected or not detected in every 100g (mL) sample.
根据上述通用方法,同时检测样品中蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌这三种细菌的周期长(至少48小时)、操作烦琐、灵敏度低、易污染、程序复杂和所需试剂(生化试验试剂和血清)繁多等缺点已远远不能满足快速检测蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的要求。According to the above general method, the simultaneous detection of the three bacteria Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the sample has a long period (at least 48 hours), cumbersome operation, low sensitivity, easy contamination, complicated procedures and required The shortcomings of various reagents (biochemical test reagents and serum) are far from being able to meet the requirements of rapid detection of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
发明内容 Contents of the invention
有鉴于此,本发明提供一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒,解决现有技术中同时检测蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌灵敏的低,周期长等技术问题,以及蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的检测方法。In view of this, the present invention provides a detection kit for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, which solves the problem of simultaneous detection of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the prior art. Low, long cycle and other technical problems, as well as detection methods for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
本发明是这样实现的,The present invention is achieved like this,
一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒,包括DNA提取液、PCR反应液,所述PCR反应液包括第一反应液、第二反应液及石蜡,所述第一反应液中包括蜡样芽孢杆菌正向引物、蜡样芽孢杆菌反向引物、蜡样芽孢杆菌探针、阪崎肠杆菌第一引物、阪崎肠杆菌第二引物、阪崎肠杆菌探针、金黄色葡萄球菌第一引物、金黄色葡萄球菌第二引物、金黄色葡萄球菌探针,所述蜡样芽孢杆菌正向引物序列如SEQ ID NO:1所示,蜡样芽孢杆菌反向引物序列如SEQ ID NO:2所示,蜡样芽孢杆菌探针序列如SEQ ID NO:3所示,阪崎肠杆菌第一引物序列如SEQ ID NO:4所示,阪崎肠杆菌第二引物序列如SEQ ID NO:5所示,阪崎肠杆菌探针序列如SEQ ID NO:6所示,金黄色葡萄球菌第一引物序列如SEQ ID NO:7所示,金黄色葡萄球菌第二引物序列如SEQ ID NO:8所示,金黄色葡萄球菌探针序列如SEQ ID NO:9。A detection kit for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, comprising a DNA extraction solution and a PCR reaction solution, the PCR reaction solution including a first reaction solution, a second reaction solution and paraffin, the first One reaction solution includes Bacillus cereus forward primer, Bacillus cereus reverse primer, Bacillus cereus probe, Enterobacter sakazakii first primer, Enterobacter sakazakii second primer, Enterobacter sakazakii probe , Staphylococcus aureus first primer, Staphylococcus aureus second primer, Staphylococcus aureus probe, described Bacillus cereus forward primer sequence as shown in SEQ ID NO: 1, Bacillus cereus reverse primer The sequence is shown in SEQ ID NO: 2, the probe sequence of Bacillus cereus is shown in SEQ ID NO: 3, the sequence of the first primer of Enterobacter sakazakii is shown in SEQ ID NO: 4, the second primer of Enterobacter sakazakii The sequence is shown in SEQ ID NO: 5, the probe sequence of Enterobacter sakazakii is shown in SEQ ID NO: 6, the first primer sequence of Staphylococcus aureus is shown in SEQ ID NO: 7, the second primer of Staphylococcus aureus The sequence is shown in SEQ ID NO: 8, and the probe sequence of Staphylococcus aureus is shown in SEQ ID NO: 9.
本发明进一步提供一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法,包括如下步骤:The present invention further provides a detection method for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, comprising the following steps:
提供蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Provide DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
进行荧光定量PCR检测,该荧光定量PCR检测步骤中使用前述的蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒。Fluorescent quantitative PCR detection is performed, and the aforementioned detection kits for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus are used in the detection step of fluorescent quantitative PCR.
本发明蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒及检测方法能同时检测蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,不用对待测样品进行长时间的增菌培养,同时加入有检测引物和探针,与传统的培养法相比具有快速、灵敏、安全等优点,可应用于蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的检测。The detection kit and detection method for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus of the present invention can detect Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus at the same time, without long-term enrichment of the samples to be tested Cultivation, adding detection primers and probes at the same time, has the advantages of rapidity, sensitivity and safety compared with traditional culture methods, and can be applied to the detection of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
附图说明 Description of drawings
图1是本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒中阳性对照PCR扩增图;Fig. 1 is the positive control PCR amplification figure in the detection kit of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention;
图2是本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒阴性对照PCR扩增图;Fig. 2 is the negative control PCR amplification figure of the Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus detection kits of the embodiment of the present invention;
图3是本发明实施例一蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试方法中阳性样本PCR扩增图;Fig. 3 is the positive sample PCR amplification figure in the detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention;
图4是本发明实施例一蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试方法中阴性样本PCR扩增图;Fig. 4 is the negative sample PCR amplification figure in the detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention;
图5是蜡杨芽孢杆菌培养法检测流程图。Fig. 5 is a flow chart of the detection method of Bacillus cereus culture.
具体实施方式 Detailed ways
为了使本发明的目的、技术方案及优点更加清楚明白,以下结合附图及实施例,对本发明进行进一步详细说明。应当理解,此处所描述的具体实施例仅仅用以解释本发明,并不用于限定本发明。In order to make the object, technical solution and advantages of the present invention clearer, the present invention will be further described in detail below in conjunction with the accompanying drawings and embodiments. It should be understood that the specific embodiments described here are only used to explain the present invention, not to limit the present invention.
实时荧光定量PCR在基础科学研究、临床诊断、疾病研究及药物研发等领域都有广泛应用。其基本原理为:在PCR反应体系中引入一种荧光化学物质,随着PCR反应的进行,PCR反应产物不断积累,荧光信号强度也等比例增加。每经过一个循环,收集一个荧光信号强度,这样就可以通过荧光强度变化监测产物量的变化,得到一条荧光扩增曲线图,PCR产物量的对数值与起始模板量之间存在线性关系,可进行定量分析。Real-time fluorescent quantitative PCR is widely used in basic scientific research, clinical diagnosis, disease research and drug development and other fields. The basic principle is: a fluorescent chemical substance is introduced into the PCR reaction system, and as the PCR reaction progresses, the PCR reaction product accumulates continuously, and the fluorescence signal intensity also increases proportionally. After each cycle, a fluorescence signal intensity is collected, so that the change of the product amount can be monitored through the change of the fluorescence intensity, and a fluorescence amplification curve is obtained. There is a linear relationship between the logarithmic value of the PCR product amount and the amount of the initial template, which can be Perform quantitative analysis.
本发明实施例提供一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒,包括DNA提取液、PCR反应液,所述PCR反应液包括第一反应液、第二反应液及石蜡,所述第一反应液中包括蜡样芽孢杆菌正向引物、蜡样芽孢杆菌反向引物、蜡样芽孢杆菌探针、阪崎肠杆菌第一引物、阪崎肠杆菌第二引物、阪崎肠杆菌探针、金黄色葡萄球菌第一引物、金黄色葡萄球菌第二引物、金黄色葡萄球菌探针,所述蜡样芽孢杆菌正向引物序列如SEQ ID NO:1所示,蜡样芽孢杆菌反向引物序列如SEQ ID NO:2所示,蜡样芽孢杆菌探针序列如SEQ ID NO:3所示,阪崎肠杆菌第一引物序列如SEQ ID NO:4所示,阪崎肠杆菌第二引物序列如SEQ ID NO:5所示,阪崎肠杆菌探针序列如SEQ ID NO:6所示,金黄色葡萄球菌第一引物序列如SEQID NO:7所示,金黄色葡萄球菌第二引物序列如SEQ ID NO:8所示,金黄色葡萄球菌探针序列如SEQ ID NO:9。An embodiment of the present invention provides a detection kit for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, comprising a DNA extraction solution, a PCR reaction solution, and the PCR reaction solution includes a first reaction solution, a second reaction solution and Paraffin, the first reaction solution includes Bacillus cereus forward primer, Bacillus cereus reverse primer, Bacillus cereus probe, Enterobacter sakazakii first primer, Enterobacter sakazakii second primer, Sakazakii Enterobacter aureus probe, Staphylococcus aureus first primer, Staphylococcus aureus second primer, Staphylococcus aureus probe, the Bacillus cereus forward primer sequence is shown in SEQ ID NO: 1, wax sample The reverse primer sequence for Bacillus is shown in SEQ ID NO: 2, the probe sequence for Bacillus cereus is shown in SEQ ID NO: 3, the first primer sequence for Enterobacter sakazakii is shown in SEQ ID NO: 4, Sakazaki The sequence of the second primer for Enterobacter sakazakii is shown in SEQ ID NO: 5, the sequence of the probe for Enterobacter sakazakii is shown in SEQ ID NO: 6, and the sequence of the first primer for Staphylococcus aureus is shown in SEQ ID NO: 7. The coccus second primer sequence is shown in SEQ ID NO: 8, and the Staphylococcus aureus probe sequence is shown in SEQ ID NO: 9.
具体地,本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒,其中包括DNA提取液、PCR反应液,可以同时进行蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的检测;该试剂盒中还包括蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌阴性对照、阳性对照。试剂盒的规格:Specifically, the detection kits for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus according to the embodiment of the present invention include DNA extraction solution and PCR reaction solution, which can simultaneously detect Bacillus cereus, Enterobacter sakazakii and aureus Staphylococcus detection; the kit also includes Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus negative control, positive control. Specifications of the kit:
阴性对照的规格为1管,40μl/管,阳性对照的规格为1管,40μl/管,DNA提取液为5ml/管(共1管),PCR反应液为8管/条×6条,20μl/管。The specification of the negative control is 1 tube, 40μl/tube, the specification of the positive control is 1 tube, 40μl/tube, the DNA extraction solution is 5ml/tube (1 tube in total), and the PCR reaction solution is 8 tubes/strip x 6 strips, 20μl /Tube.
该阴性对照为不含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌基因的Tris-EDTA缓冲液(0.01M pH8.0)。The negative control is Tris-EDTA buffer (0.01M pH8.0) that does not contain Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus genes.
该阳性对照为使用蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌和DNA提取制备的阳性模板对照品,使用Tris-EDTA缓冲液(0.01MpH8.0)稀释后冷冻保存。该阴性和阳性对照用于检测时的自我检验,防止检出误差的出现。请参阅图1和图2,图1显示试剂盒中阳性对照的PCR扩增图谱,图2显示试剂盒中阴性对照的PCR扩增图谱。The positive control is a positive template control prepared by using Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus and DNA extraction, which is diluted with Tris-EDTA buffer (0.01MpH8.0) and stored frozen. The negative and positive controls are used for self-inspection during detection to prevent detection errors. Please refer to Figure 1 and Figure 2, Figure 1 shows the PCR amplification pattern of the positive control in the kit, and Figure 2 shows the PCR amplification pattern of the negative control in the kit.
具体地,该DNA提取液(用于提取DNA)具体成分为:Tris—EDTA缓冲液(0.01M pH8.0),含0.01%NP-40。Specifically, the specific components of the DNA extraction solution (for extracting DNA) are: Tris-EDTA buffer solution (0.01M pH8.0), containing 0.01% NP-40.
具体地,该PCR反应液包括第一反应、第二反应液及石蜡,该第一反应液和第二反应液通过石蜡实现分隔,在PCR反应过程中,由于温度在95℃,石蜡融化,第一反应液和第二反应液混合,PCR反应得以进行,该石蜡的具体内容见专利(200910190112.7)。该PCR反应试剂存放于普通离心管中,该第一反应液位于下端,石蜡位于中间,该第二反应液位于石蜡上面。Specifically, the PCR reaction solution includes the first reaction solution, the second reaction solution and paraffin, and the first reaction solution and the second reaction solution are separated by the paraffin wax. During the PCR reaction, since the paraffin wax melts at a temperature of 95° C., the second The first reaction liquid and the second reaction liquid are mixed, and the PCR reaction can be carried out. For the specific content of the paraffin, please refer to the patent (200910190112.7). The PCR reaction reagent is stored in a common centrifuge tube, the first reaction solution is located at the lower end, the paraffin is located in the middle, and the second reaction solution is located on the paraffin.
具体地,该第一反应液包括缓冲液,氯化镁,dNTPs,蜡样芽孢杆菌正向引物、蜡样芽孢杆菌反向引物、蜡样芽孢杆菌探针、阪崎肠杆菌第一引物、阪崎肠杆菌第二引物、阪崎肠杆菌探针、金黄色葡萄球菌第一引物、金黄色葡萄球菌第二引物、金黄色葡萄球菌探针,以及,灭菌超纯水,第一反应液的总体积为18微升/管。Specifically, the first reaction solution includes buffer, magnesium chloride, dNTPs, Bacillus cereus forward primer, Bacillus cereus reverse primer, Bacillus cereus probe, Enterobacter sakazakii first primer, Enterobacter sakazakii Bacillus second primer, Enterobacter sakazakii probe, Staphylococcus aureus first primer, Staphylococcus aureus second primer, Staphylococcus aureus probe, and, sterilized ultrapure water, the total volume of the first reaction solution 18 μl/tube.
该缓冲液为10×Buffer,该缓冲液(宝生物工程(大连)有限公司)中不含有镁离子。该缓冲液的体积为2~4微升/管;The buffer is 10×Buffer, and the buffer (Bao Bioengineering (Dalian) Co., Ltd.) does not contain magnesium ions. The volume of the buffer is 2-4 microliters/tube;
该该氯化镁的浓度为25mM,该氯化镁的体积为2~4微升/管;The concentration of the magnesium chloride is 25mM, and the volume of the magnesium chloride is 2-4 microliters/tube;
该dNTPs的浓度2.5mM,体积为2~4微升/管;The concentration of the dNTPs is 2.5mM, and the volume is 2-4 microliters/tube;
该蜡样芽孢杆菌正向引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该蜡样芽孢杆菌正向引物的核苷酸序列如SEQID NO:1所示,具体为:5’-AAATCAA ACAAATTGTT GCGC-3’-;The concentration of the Bacillus cereus forward primer is 50 μM, and the volume is 0.1-0.2 μl/tube, such as 0.15 μl/tube. The nucleotide sequence of the Bacillus cereus forward primer is shown in SEQ ID NO: 1 , specifically: 5'-AAATCAA ACAAATTGTT GCGC-3'-;
该蜡样芽孢杆菌反向引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该蜡样芽孢杆菌反向引物的核苷酸序列如SEQID NO:2所示,具体为:The concentration of the Bacillus cereus reverse primer is 50 μM, and the volume is 0.1-0.2 μl/tube, such as 0.15 μl/tube. The nucleotide sequence of the Bacillus cereus reverse primer is shown in SEQ ID NO: 2 ,Specifically:
5’-CCATATTAGTGAAAGCCGCACT-3’;5'-CCATATTAGTGAAAGCCGCACT-3';
该蜡样芽孢杆菌探针的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该蜡样芽孢杆菌探针的核苷酸序列如SEQ ID NO:3所示,具体为:5’-(FAM)TAGTT TGTTTAACAA CGCGCG(DABCYL)-3’;The concentration of the Bacillus cereus probe is 50 μM, and the volume is 0.1-0.2 μl/tube, such as 0.15 μl/tube. The nucleotide sequence of the Bacillus cereus probe is shown in SEQ ID NO: 3, Specifically: 5'-(FAM)TAGTT TGTTTAACAA CGCGCG(DABCYL)-3';
该阪崎肠杆菌第一引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该阪崎肠杆菌第一引物的核苷酸序列如SEQ IDNO:4所示,具体为:5’-AGCTTCCG CAGTGAAACG TCACG-3’;The concentration of the first primer of Enterobacter sakazakii is 50 μM, and the volume is 0.1-0.2 microliter/tube, such as 0.15 microliter/tube. The nucleotide sequence of the first primer of Enterobacter sakazakii is shown in SEQ ID NO: 4 , specifically: 5'-AGCTTCCG CAGTGAAACG TCACG-3';
该阪崎肠杆菌第二引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该阪崎肠杆菌第二引物的核苷酸序列如SEQ IDNO:5所示,具体为:5’-GCACTGCAAAGTGACGCCTTCG-3’;The concentration of the second primer of Enterobacter sakazakii is 50 μM, and the volume is 0.1-0.2 microliter/tube, such as 0.15 microliter/tube. The nucleotide sequence of the second primer of Enterobacter sakazakii is shown in SEQ ID NO: 5 , specifically: 5'-GCACTGCAAAGTGACGCCTTCG-3';
该阪崎肠杆菌探针的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该阪崎肠杆菌探针的核苷酸序列如SEQ ID NO:6所示,具体为:The concentration of the Enterobacter sakazakii probe is 50 μM, and the volume is 0.1-0.2 microliter/tube, such as 0.15 microliter/tube. The nucleotide sequence of the Enterobacter sakazakii probe is shown in SEQ ID NO: 6, Specifically:
5’-(HEX)CTGGCTC GCGAAAACGC ACGC(DABCYL)-3’;5'-(HEX)CTGGCTC GCGAAAACGC ACGC(DABCYL)-3';
该金黄色葡萄球菌第一引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该金黄色葡萄球菌第一引物的核苷酸序列如SEQ ID NO:7所示,具体为:5’-ATACACCT GAAACAAAGCATCC-3’-;The concentration of the first primer for Staphylococcus aureus is 50 μM, and the volume is 0.1-0.2 microliters/tube, such as 0.15 microliters/tube. The nucleotide sequence of the first primer for Staphylococcus aureus is shown in SEQ ID NO: 7. Specifically, it is: 5'-ATACACCT GAAACAAAGCATCC-3'-;
该金黄色葡萄球菌第二引物的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该金黄色葡萄球菌第二引物的核苷酸序列如SEQ ID NO:8所示,具体为:The concentration of the second primer for Staphylococcus aureus is 50 μM, and the volume is 0.1-0.2 microliter/tube, such as 0.15 microliter/tube. The nucleotide sequence of the second primer for Staphylococcus aureus is shown in SEQ ID NO: 8. show, specifically:
5’-AAGTCCTGGTATAAAGAGATGTGG-3’;5'-AAGTCCTGGTATAAAGAGATGTGG-3';
该金黄色葡萄球菌探针的浓度为50μM,体积为0.1~0.2微升/管,例如0.15微升/管,该金黄色葡萄球菌探针的核苷酸序列如SEQ IDNO:9所示,具体为:5’-(ROX)GGTGTAGAG AAATATGGTC CTGA(DABCYL)-3’;The concentration of the Staphylococcus aureus probe is 50 μM, and the volume is 0.1-0.2 microliters/tube, such as 0.15 microliters/tube. The nucleotide sequence of the Staphylococcus aureus probe is shown in SEQ ID NO: 9, specifically For: 5'-(ROX)GGTGTAGAG AAATATGGTC CTGA(DABCYL)-3';
该灭菌超纯水的量为4.2~11.1微升/管,实现第一反应液的体积为18微升/管。The amount of the sterilized ultrapure water is 4.2-11.1 microliters/tube, and the volume of the first reaction solution is 18 microliters/tube.
具体地,该第二反应液包括Taq酶、显色剂及灭菌超纯水,该第二反应液的总体积为2微升/管。Specifically, the second reaction solution includes Taq enzyme, chromogen and sterilized ultrapure water, and the total volume of the second reaction solution is 2 microliters/tube.
该Taq酶的体积为0.15-0.3微升/管,显色剂的体积为0.01-0.02微升/管,该显色剂例如,溴酚兰。该灭菌超纯水的量为1.68~1.84微升/管,使第二反应液的体积满足2微升/管。The volume of the Taq enzyme is 0.15-0.3 microliter/tube, the volume of the chromogenic reagent is 0.01-0.02 microliter/tube, and the chromogenic reagent is, for example, bromophenol blue. The amount of the sterilized ultrapure water is 1.68-1.84 microliters/tube, so that the volume of the second reaction solution satisfies 2 microliters/tube.
具体地,该石蜡的体积为20微升/管。Specifically, the volume of the paraffin is 20 microliters/tube.
本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒能同时检测蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,与传统的培养法相比具有快速、灵敏、安全等优点,可应用于蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的检测。The detection kit for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention can detect Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus at the same time. Safety and other advantages, can be applied to the detection of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
本发明实施例进一步提供一种蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法,包括如下步骤:The embodiment of the present invention further provides a detection method for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, comprising the following steps:
步骤S01,增菌培养和标本处理:Step S01, enrichment culture and specimen processing:
提供蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Provide DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
步骤S02,实时荧光PCR:Step S02, real-time fluorescent PCR:
进行实时荧光定量PCR检测,该荧光定量PCR检测步骤中使用上述的蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试剂盒。Perform real-time fluorescent quantitative PCR detection, and use the above-mentioned Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus detection kits in the fluorescent quantitative PCR detection step.
具体地,步骤S01在无菌条件下操作。Specifically, step S01 is performed under sterile conditions.
具体地,步骤S01中,采集样本,该样本中可能含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,也可能不含有,需要本发明实施例的检测方法进行检测确定。因此,本步骤S01中,蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品中可能含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA,也可能不含有。Specifically, in step S01, a sample is collected, and the sample may or may not contain Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, which needs to be determined by the detection method of the embodiment of the present invention. Therefore, in this step S01, the DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus may or may not contain the DNA of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus.
将采集后的标本放置37℃恒温室内进行3小时增菌培养;然后在进行如下DNA裂解处理:Place the collected specimens in a constant temperature room at 37°C for 3 hours of enrichment culture; then perform the following DNA lysis treatment:
取1ml增菌液加入DNA提取液50μL,反复抽吸3次充分混匀标本。Take 1ml of the enrichment solution and add 50μL of the DNA extraction solution, and repeatedly aspirate 3 times to fully mix the specimen.
具体地,步骤S02中,取步骤S01中所得到的上清液,进行荧光定量PCR分析,本步骤中所使用的荧光定量PCR设备没有限制,ABI系列、Bio-Rad系列(ICycler/MJ Opticon 2)、Stratagene MX系列、Roche LightCycler、Cepheid SmartCycler、Corbett Rotor-Gene、杭州博日系列。Specifically, in step S02, the supernatant obtained in step S01 is taken for fluorescent quantitative PCR analysis. The fluorescent quantitative PCR equipment used in this step is not limited, ABI series, Bio-Rad series (ICycler/MJ Opticon 2 ), Stratagene MX series, Roche LightCycler, Cepheid SmartCycler, Corbett Rotor-Gene, Hangzhou Bioer series.
步骤S02中PCR反应的条件为:The conditions of the PCR reaction in step S02 are:
50-55℃:2-5min;50-55℃: 2-5min;
94-95℃:2-3min;94-95°C: 2-3min;
94-95℃:5-10S,55-60℃:40-80S;(40循环)。94-95°C: 5-10S, 55-60°C: 40-80S; (40 cycles).
本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法中,每次检测都设置试剂盒中的阳性对照和阴性对照,以防止检测过程中污染的出现。In the detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention, a positive control and a negative control in the kit are provided for each detection to prevent contamination during the detection process.
以下结合具体实施例对上述蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法进行详细说明。The above detection methods for Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus will be described in detail below in conjunction with specific examples.
实施例一Embodiment one
本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法包括如下步骤:The detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention comprises the following steps:
1、采集蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的样本,该样本数为20个,其中一些样本中含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,一些样本没有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌。将采集后的标本放置37℃恒温室内进行3小时增菌培养;然后在进行如下DNA裂解处理:1. Collect samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, the number of samples is 20, some samples contain Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, some samples do not Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus. Place the collected specimens in a constant temperature room at 37°C for 3 hours of enrichment culture; then perform the following DNA lysis treatment:
取1ml增菌液加入DNA提取液50μL,反复抽吸3次充分混匀标本,得到蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Take 1ml of the enrichment solution and add 50μL of the DNA extraction solution, pump repeatedly 3 times to fully mix the specimen, and obtain the DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
2、取上述PCR反应液,该PCR反应液中各个组分为:2. Take the above PCR reaction solution, each component in the PCR reaction solution is:
在如下条件下进行实施荧光定量PCR反应,并进行检测:The fluorescent quantitative PCR reaction was carried out and detected under the following conditions:
50-55℃:2-5min;50-55℃: 2-5min;
94-95℃:2-3min;94-95°C: 2-3min;
94-95℃:5-10S,55-60℃:40-80S;(40循环)。94-95°C: 5-10S, 55-60°C: 40-80S; (40 cycles).
实施例二Embodiment two
本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法包括如下步骤:The detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention comprises the following steps:
1、采集蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的样本,该样本数为20个,其中一些样本中含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,一些样本没有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌。将采集后的标本放置37℃恒温室内进行3小时增菌培养;然后在进行如下DNA裂解处理:1. Collect samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, the number of samples is 20, some samples contain Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, some samples do not Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus. Place the collected specimens in a constant temperature room at 37°C for 3 hours of enrichment culture; then perform the following DNA lysis treatment:
取1ml增菌液加入DNA提取液50μL,反复抽吸3次充分混匀标本,得到蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Take 1ml of the enrichment solution and add 50μL of the DNA extraction solution, pump repeatedly 3 times to fully mix the specimen, and obtain the DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
2、取上述PCR反应液,该PCR反应液中各个组分为:2. Take the above PCR reaction solution, each component in the PCR reaction solution is:
在如下条件下进行实施荧光定量PCR反应,并进行检测:The fluorescent quantitative PCR reaction was carried out and detected under the following conditions:
50-55℃:2-5min;50-55℃: 2-5min;
94-95℃:2-3min;94-95°C: 2-3min;
94-95℃:5-10S,55-60℃:40-80S;(40循环)。94-95°C: 5-10S, 55-60°C: 40-80S; (40 cycles).
实施例三Embodiment three
本发明实施例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法包括如下步骤:The detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention comprises the following steps:
1、采集蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的样本,该样本数为20个,其中一些样本中含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌,一些样本没有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌。将采集后的标本放置37℃恒温室内进行3小时增菌培养;然后在进行如下DNA裂解处理:1. Collect samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, the number of samples is 20, some samples contain Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus, some samples do not Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus. Place the collected specimens in a constant temperature room at 37°C for 3 hours of enrichment culture; then perform the following DNA lysis treatment:
取1ml增菌液加入DNA提取液50μL,反复抽吸3次充分混匀标本,得到蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Take 1ml of the enrichment solution and add 50μL of the DNA extraction solution, pump repeatedly 3 times to fully mix the specimen, and obtain the DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
2、取上述PCR反应液,该PCR反应液中各个组分为:2. Take the above PCR reaction solution, each component in the PCR reaction solution is:
在如下条件下进行实施荧光定量PCR反应,并进行检测:The fluorescent quantitative PCR reaction was carried out and detected under the following conditions:
50-55℃:2-5min;50-55℃: 2-5min;
94-95℃:2-3min;94-95°C: 2-3min;
94-95℃:5-10S,55-60℃:40-80S;(40循环)。94-95°C: 5-10S, 55-60°C: 40-80S; (40 cycles).
对比例comparative example
本对比例蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法包括如下步骤:The detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in this comparative example comprises the following steps:
1、采集含有蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的样本,该对比例的样本和实施例一的样本一致,将采集后的标本放置37℃恒温室内进行3小时增菌培养;然后在进行如下DNA裂解处理:1. Collect samples containing Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus. The samples in this comparative example are consistent with the samples in Example 1. Place the collected samples in a constant temperature room at 37°C for 3 hours of enrichment culture ; Then carry out the following DNA cleavage process:
取1ml增菌液加入DNA提取液50μL,反复抽吸3次充分混匀标本,得到蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌的DNA样品;Take 1ml of the enrichment solution and add 50μL of the DNA extraction solution, pump repeatedly 3 times to fully mix the specimen, and obtain the DNA samples of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus;
2、按照前面背景技术所讲的国际通用方法进行检测。2. Perform detection according to the international common method mentioned in the previous background technology.
请参阅下表,下表显示应用实施例一和对比例的方法检测20例样本的结果:Please refer to the following table, the following table shows the results of the method of application embodiment one and comparative example to detect 20 examples of samples:
从该表中可以看出,本发明实施例一的方法和对比例的方法接侧结果一致。It can be seen from the table that the method of the first embodiment of the present invention and the method of the comparative example have consistent results.
请参阅图3、图4,图3是本发明实施例一蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试方法中阳性样本PCR扩增图;图4是本发明实施例一蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测试方法中阴性样本PCR扩增图将图3和图1、图4和图2对比后可知,本发明实施例一的蜡样芽孢杆菌、阪崎肠杆菌及金黄色葡萄球菌检测方法,能够检测出样本中阳性样本和阴性样本,检测结果正确。Please refer to Fig. 3, Fig. 4, Fig. 3 is the positive sample PCR amplification figure in the detection method of Bacillus cereus, Enterobacter sakazakii and Staphylococcus aureus in the embodiment of the present invention; After comparing Fig. 3 with Fig. 1, Fig. 4 and Fig. 2, it can be known that Bacillus cereus, Bacillus cereus, The detection method of Enterobacter sakazakii and Staphylococcus aureus can detect positive samples and negative samples in the samples, and the detection results are correct.
以上所述仅为本发明的较佳实施例而已,并不用以限制本发明,凡在本发明的精神和原则之内所作的任何修改、等同替换和改进等,均应包含在本发明的保护范围之内。The above descriptions are only preferred embodiments of the present invention, and are not intended to limit the present invention. Any modifications, equivalent replacements and improvements made within the spirit and principles of the present invention should be included in the protection of the present invention. within range.
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