CN102492700A - DNA sequence for coding delta15 fatty acid desaturase (FAD) of Myrmecia incisa and application thereof - Google Patents
DNA sequence for coding delta15 fatty acid desaturase (FAD) of Myrmecia incisa and application thereof Download PDFInfo
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Abstract
本发明涉及一种编码缺刻缘绿藻Δ15脂肪酸去饱和酶的DNA序列,所述的DNA序列包括:(a)SEQIDNO.10所述的核苷酸序列,或(b)与(a)所述的核苷酸序列互补的核苷酸序列。本发明还提供了含有上述核苷酸序列的重组表达载体和基因工程化的宿主细胞及其用途。本发明的优点在于:克隆了缺刻缘绿藻的脂肪酸去饱和酶基因并对其进行了功能鉴定,为阐明缺刻缘绿藻的长链多不饱和脂肪酸合成代谢途径奠定了基础,并为在生物体内进行遗传操作以实现ω3长链多不饱和脂肪酸的高效合成创造了条件。
The present invention relates to a DNA sequence encoding the Δ15 fatty acid desaturase of Chlorella nigrum, said DNA sequence comprising: (a) the nucleotide sequence described in SEQ ID NO.10, or (b) and (a) The nucleotide sequence complementary to the nucleotide sequence. The present invention also provides a recombinant expression vector containing the above nucleotide sequence, a genetically engineered host cell and its application. The present invention has the advantages of cloning the fatty acid desaturase gene of green algae with a nicked edge and identifying its function, laying the foundation for elucidating the synthesis and metabolism pathway of long-chain polyunsaturated fatty acids in green algae with a nicked edge In vivo genetic manipulation to achieve efficient synthesis of ω3 long-chain polyunsaturated fatty acids creates conditions.
Description
技术领域 technical field
本发明涉及一种DNA序列,具体地说,是一种编码缺刻缘绿藻Δ15脂肪酸去饱和酶的DNA序列及其应用。 The present invention relates to a DNA sequence, specifically, a DNA sequence encoding the Δ15 fatty acid desaturase of green algae nicked margin and its application.
背景技术 Background technique
ω3长链多不饱和脂肪酸(ω3 polyunsaturated fatty acid,ω3 PUFA)主要包括α-亚麻酸(α-linolenic acid,C18:3Δ9, 12, 15,ALA)、二十碳五烯酸(eicosapentenoic acid,C20:5Δ5, 8, 11, 14, 17,EPA)和二十二碳六烯酸(docosahexenoic acid,C20:6Δ4, 7, 11, 13, 16, 19,DHA)。它在人体中有多种生理学及药理学活性,可预防心脑血管疾病、抑制肿瘤生长等。例如,DHA和EPA参加到神经元细胞膜的卵磷脂中,使细胞膜的液态流动性变好,通透性增加;DHA对大脑神经细胞的分裂、增殖、神经传导、突触的生长和发育起着重要的作用,是大脑合成和智商开发的必需物质,尤其对婴儿的视力及神经发育非常关键。ω3 PUFA还可降低多核白细胞及肥大细胞膜磷脂中花生四烯酸(arachidonic acid,C20:4Δ5, 8, 11, 14,ArA)的含量,使过敏反应发生时其释放量减少,从而降低白三烯的生成,减少炎症。 ω3 long-chain polyunsaturated fatty acid (ω3 polyunsaturated fatty acid, ω3 PUFA) mainly includes α-linolenic acid (C18:3 Δ9, 12, 15 , ALA), eicosapentenoic acid (eicosapentenoic acid, C20:5 Δ5, 8, 11, 14, 17 , EPA) and docosahexenoic acid (C20:6 Δ4, 7, 11, 13, 16, 19 , DHA). It has a variety of physiological and pharmacological activities in the human body, and can prevent cardiovascular and cerebrovascular diseases and inhibit tumor growth. For example, DHA and EPA participate in the lecithin of the neuronal cell membrane, which improves the liquid fluidity and permeability of the cell membrane; DHA plays an important role in the division, proliferation, nerve conduction, synaptic growth and development of brain nerve cells. It plays an important role and is an essential substance for brain synthesis and IQ development, especially for the baby's vision and neurodevelopment. ω3 PUFA can also reduce the content of arachidonic acid (arachidonic acid, C20:4 Δ5, 8, 11, 14 , ArA) in the phospholipids of multinucleated leukocytes and mast cells, and reduce its release when allergic reactions occur, thereby reducing white three Oxygen production, reduces inflammation.
虽然ω3 PUFA对人体健康具有重要的作用,但是ω3 PUFA却是人类的必需脂肪酸,即人体自身并不能合成ω3 PUFA,而必须从食物中获得。 Although ω3 PUFA plays an important role in human health, ω3 PUFA is an essential fatty acid for humans, that is, the human body cannot synthesize ω3 PUFA itself, but must be obtained from food.
因海产品中ω3 PUFA的含量较高,因此,目前ω3 PUFA的商业来源主要是海产品,如市场上的鱼油。但鱼油存在腥味重、口感不佳、含胆固醇及芥酸等缺点,再加上海洋鱼类资源的不足,因而寻找合适的ω3 PUFA原料是营养学、卫生学、生物学等方面研究人员急待解决的问题。其中,植物中的ALA在合适的酶催化下,可转化为EPA和DHA,同样具有鱼油类似功能,且性质稳定、易获取、不含胆固醇和芥酸等特点,因而近来对植物ALA的研究特别重视与关注。缺刻缘绿藻(Myrmecia incisa)是一种单细胞绿藻,属于绿藻门、Trebouxiophyceae纲,细胞常聚集在一起形成类似非定形群体的细胞团。研究发现该藻含有ALA、EPA等ω3 PUFA,与其他微藻比较,该藻PUFA含量较高,有利于通过微藻生物反应器工业化生产PUFA,实现微藻产品的高值化。 Due to the high content of ω3 PUFA in seafood, the current commercial sources of ω3 PUFA are mainly seafood, such as fish oil on the market. However, fish oil has the disadvantages of heavy fishy smell, poor taste, cholesterol and erucic acid, and the lack of marine fish resources. Therefore, it is urgent for researchers in nutrition, hygiene, biology and other fields to find suitable ω3 PUFA raw materials. unresolved issues. Among them, ALA in plants can be converted into EPA and DHA under the catalysis of suitable enzymes, which also has similar functions to fish oil, and is stable in nature, easy to obtain, and free of cholesterol and erucic acid. Therefore, the recent research on plant ALA is particularly important. Attention and concern. Myrmecia incisa is a single-celled green alga belonging to the phylum Chlorophyta and the class Trebouxiophyceae. Cells often gather together to form cell clusters similar to amorphous groups. Studies have found that the algae contains ω3 PUFA such as ALA and EPA. Compared with other microalgae, the algae has a higher PUFA content, which is conducive to the industrial production of PUFA through microalgae bioreactors and the realization of high-value microalgae products.
在微藻的PUFA合成代谢途径中,微藻脂肪酸去饱和酶(fatty acid desaturase,FAD)是PUFA合成的关键酶类,而ω3脂肪酸去饱和酶(ω3 fatty acid desaturase,ω3 FAD)则是微藻FAD中的一种。在微藻中,ω3 FAD主要包括Δ15 FAD、Δ17 FAD等。其中Δ15 FAD可催化缺刻缘绿藻的亚油酸(linoleic acid,C18:2Δ9, 12,LA)Δ15位去饱和转化为ALA,Δ17 FAD可催化缺刻缘绿藻的ArA产生EPA,从而进入ω3 PUFA代谢途径。因此,克隆和鉴定微藻PUFA合成的关键酶类——ω3 FAD,对通过基因工程方法大规模生产ω3 PUFA意义重大。 In the PUFA synthesis pathway of microalgae, microalgal fatty acid desaturase (fatty acid desaturase, FAD) is the key enzyme for PUFA synthesis, and ω3 fatty acid desaturase (ω3 fatty acid desaturase, ω3 FAD) is the One of a kind in FAD. In microalgae, ω3 FAD mainly includes Δ15 FAD, Δ17 FAD and so on. Among them, Δ15 FAD can catalyze the desaturation of linoleic acid (linoleic acid, C18:2 Δ9, 12 , LA) into ALA at the Δ15 position of green algae, and Δ17 FAD can catalyze ArA of green algae to produce EPA, thereby entering ω3 PUFA metabolic pathways. Therefore, the cloning and identification of the key enzymes for PUFA synthesis in microalgae—ω3 FAD is of great significance for the large-scale production of ω3 PUFA through genetic engineering.
中国专利文献CN 200710300675.8,公告日2011年9月7日,公开了一种海洋微藻Δ5脂肪酸去饱和酶、其编码基因其应用,该发明提供的一种海洋微藻Δ5脂肪酸去饱和酶可有效地催化ETA(20:4Δ8,11,14,17)生成EPA(20:5Δ5,8,11,14,17);中国专利文献CN 200810115245.3,公告日2010年12月22日,公开了一种海洋微藻Δ6脂肪酸去饱和酶、其编码基因其应用,该发明提供的一种海洋微藻Δ6脂肪酸去饱和酶可有效地催化LA生成SDA(18:4Δ6,9,12,15)。但是关于编码缺刻缘绿藻Δ15 FAD的DNA序列及其应用目前还未见报道。 Chinese patent document CN 200710300675.8, announced on September 7, 2011, discloses a marine microalgae Δ5 fatty acid desaturase, its encoding gene and its application. The marine microalgae Δ5 fatty acid desaturase provided by the invention can effectively Catalyze ETA (20:4 Δ8,11,14,17 ) to generate EPA (20:5 Δ5,8,11,14,17 ); Chinese patent document CN 200810115245.3, announced on December 22, 2010, discloses a A marine microalgae Δ6 fatty acid desaturase, its coding gene and its application, the invention provides a marine microalgae Δ6 fatty acid desaturase that can effectively catalyze LA to generate SDA (18:4 Δ6,9,12,15 ). However, there is no report about the DNA sequence encoding Δ15 FAD of Chlorella nichei and its application.
发明内容 Contents of the invention
本发明的目的是针对现有技术中的不足,提供一种编码缺刻缘绿藻Δ15脂肪酸去饱和酶的DNA序列。 The object of the present invention is to provide a DNA sequence encoding the Δ15 fatty acid desaturase of green algae Δ15 to address the deficiencies in the prior art.
本发明的再一的目的是,提供一种重组表达载体。 Another object of the present invention is to provide a recombinant expression vector.
本发明的另一的目的是,提供一种基因工程化的宿主细胞。 Another object of the present invention is to provide a genetically engineered host cell.
本发明的另一的目的是,提供一种上述DNA序列、重组表达载体和宿主细胞的用途。 Another object of the present invention is to provide a use of the above-mentioned DNA sequence, recombinant expression vector and host cell.
为实现上述目的,本发明采取的技术方案是: For realizing above-mentioned object, the technical scheme that the present invention takes is:
所述的DNA序列包括: Described DNA sequence comprises:
(a)SEQ ID NO.10所述的核苷酸序列,或 (a) the nucleotide sequence set forth in SEQ ID NO.10, or
(b)与(a)所述的核苷酸序列互补的核苷酸序列。 (b) A nucleotide sequence complementary to the nucleotide sequence described in (a).
为实现上述第二个目的,本发明采取的技术方案是: For realizing above-mentioned second purpose, the technical scheme that the present invention takes is:
所述的载体是由上述核苷酸序列与质粒或病毒所构建的重组表达载体。 The vector is a recombinant expression vector constructed by the above nucleotide sequence and plasmid or virus.
所述的质粒是pYES2质粒。 The plasmid in question is the pYES2 plasmid.
为实现上述第三个目的,本发明采取的技术方案是: For realizing above-mentioned 3rd purpose, the technical scheme that the present invention takes is:
所述的宿主细胞选自于下列一种宿主细胞: The host cell is selected from one of the following host cells:
(a)用上述核苷酸序列转化或转导的宿主细胞及其后代细胞; (a) host cells transformed or transduced with the above nucleotide sequences and their progeny cells;
(b)用上述重组表达载体转化或转导的宿主细胞及其后代细胞。 (b) Host cells transformed or transduced with the above-mentioned recombinant expression vectors and their progeny cells.
所述的宿主细胞是细菌细胞、真菌细胞、植物细胞或动物细胞,或这些宿主细胞的后代。 The host cells are bacterial cells, fungal cells, plant cells or animal cells, or progeny of these host cells.
所述的宿主细胞是酵母细胞。 The host cell is a yeast cell.
为实现上述第四个目的,本发明采取的技术方案是: For realizing above-mentioned 4th object, the technical scheme that the present invention takes is:
所述的DNA序列、所述的重组表达载体或所述的宿主细胞在生产长链多不饱和脂肪酸中的应用。 The application of the DNA sequence, the recombinant expression vector or the host cell in the production of long-chain polyunsaturated fatty acids.
所述的长链多不饱和脂肪酸是ω3长链多不饱和脂肪酸。 The long-chain polyunsaturated fatty acid is ω3 long-chain polyunsaturated fatty acid.
所述的长链多不饱和脂肪酸是α-亚麻酸。 The long-chain polyunsaturated fatty acid is α-linolenic acid.
本发明优点在于: The present invention has the advantage that:
1、本发明克隆了缺刻缘绿藻的ω3 FAD基因并对其进行了功能鉴定,证实其可以编码Δ15 FAD酶,将LA催化成为ALA。 1. The present invention has cloned the ω3 FAD gene of Chlorella nicotii and carried out functional identification on it, confirming that it can encode Δ15 FAD enzyme, which can catalyze LA into ALA.
2、本发明为阐明缺刻缘绿藻的PUFA合成代谢途径奠定了基础。 2. The present invention lays the foundation for elucidating the PUFA synthesis and metabolism pathways of Chlorella notch margin.
3、本发明为提高油料作物合成PUFA的能力提供了理论基础,为在生物体内进行遗传操作以实现ω3 PUFA的高效合成创造了条件,如将该基因转入到油料作物中,能够有效地将LA去饱和为ALA,使这些油料作物具有合成ω3 PUFA的能力,以提高其品质。 3. The present invention provides a theoretical basis for improving the ability of oil crops to synthesize PUFAs, and creates conditions for the efficient synthesis of ω3 PUFAs by genetic manipulation in organisms. If the gene is transferred to oil crops, it can effectively Desaturation of LA to ALA endows these oil crops with the ability to synthesize ω3 PUFAs to improve their quality.
附图说明 Description of drawings
附图1是5′-和3′-末端RACE扩增和特异性目的条带的电泳图谱。
Accompanying
附图2是缺刻缘绿藻ω3 FAD基因全长结构示意图。
附图3是未添加底物组的酵母脂肪酸成分检测结果。 Accompanying drawing 3 is the detection result of the yeast fatty acid component without adding substrate group.
附图4是添加底物LA(C18:2Δ9, 12)组的酵母脂肪酸成分检测结果。 Figure 4 shows the detection results of the fatty acid components of yeast in the group added with the substrate LA (C18:2 Δ9, 12 ).
附图5是酵母脂肪酸成分的GC-MS图谱。 Accompanying drawing 5 is the GC-MS spectrum of yeast fatty acid composition.
具体实施方式 Detailed ways
下面结合附图对本发明提供的具体实施方式作详细说明。 The specific embodiments provided by the present invention will be described in detail below in conjunction with the accompanying drawings.
实施例 Example
1、材料 1. Materials
(1)缺刻缘绿藻(Myrmecia incisa Reisigl)H4301来自Culture collection of algae of Charles University of Prague。在温度为25℃、光照强度为115 μmol photons m-2 s-1、光/暗比为14 h/10 h的条件下培养,培养基为BG-11。 (1) Myrmecia incisa Reisigl H4301 was obtained from the Culture collection of algae of Charles University of Prague. The culture medium was BG-11 under the condition of temperature of 25°C, light intensity of 115 μmol photons m -2 s -1 , light/dark ratio of 14 h/10 h.
(2)pYES2质粒载体和酵母INVSc1菌株(His–、Leu–、Trp–及Ura–缺陷型)均购自Invitrogen公司。酵母用YPD培养基,28℃,200 rpm转速振荡培养。 (2) The pYES2 plasmid vector and the yeast INVSc1 strain (His – , Leu – , Trp – and Ura – deficient) were purchased from Invitrogen. Yeast was cultured in YPD medium at 28°C with shaking at 200 rpm.
2、方法 2. Method
(1)取100 mg新鲜的藻细胞置于预冷的研钵中,加入液氮充分研磨。 (1) Take 100 mg of fresh algae cells and place them in a pre-cooled mortar, add liquid nitrogen and grind them thoroughly.
(2)CTAB法提取基因组DNA和Trizol法抽提总RNA,-20℃保存备用。取1-5 μg RNA,用反转录试剂盒(TaKaRa公司)进行cDNA第一链合成,作为基因克隆的PCR反应模板。 (2) Genomic DNA was extracted by CTAB method and total RNA was extracted by Trizol method, and stored at -20°C for later use. Take 1-5 μg of RNA, and use a reverse transcription kit (TaKaRa Company) to synthesize the first strand of cDNA as a PCR reaction template for gene cloning.
(3)根据莱茵衣藻和普通小球藻ω3 FAD氨基酸序列(GenBank登录号分别为ABL09485和BAB78717)的保守区TMFWALF和HHDIGTH,设计简并引物序列:上游引物(SEQ ID NO.1):5’-ACCATGTTCTGGGC(C/T)CT(G/C)TT-3’,下游引物(SEQ ID NO.2):5’-TG(G/C)GTGCC(A/G)ATGTCGTGGTG-3’(在附加的序列表中,y表示C/T,s表示G/C,r表示A/G),用于缺刻缘绿藻ω3 FAD基因cDNA片段的克隆。然后应用下列反应体系和程序进行PCR扩增。25 μL的反应体系包含:10×PCR缓冲液 2.5 μL,dNTP(各10 mM)2 μL,引物各1.0 μL(10 μM),模板1.0 μL,Taq酶0.5 μL(TaKaRa公司),无RNase水17 μL。PCR反应程序为:94℃预变性2 min,然后30个循环包括94℃变性30 s,58℃退火30 s,72℃延伸1 min,最后72℃延伸10 min。将PCR产物胶回收纯化后,与pMD19T载体(Promega公司)连接后转入大肠杆菌DH5α感受态细胞,筛选阳性克隆,菌落PCR验证后,将阳性克隆菌液送至上海桑尼生物科技有限公司测序得到缺刻缘绿藻ω3 FAD基因片段的序列。 (3) According to the conserved regions TMFWALF and HHDIGTH of the amino acid sequences of Chlamydomonas reinhardtii and Chlorella vulgaris ω3 FAD (GenBank accession numbers are ABL09485 and BAB78717, respectively), degenerate primer sequences were designed: upstream primer (SEQ ID NO.1): 5 '-ACCATGTTCTGGGC(C/T)CT(G/C)TT-3', downstream primer (SEQ ID NO.2): 5'-TG(G/C)GTGCC(A/G)ATGTCGTGGTG-3' (in In the attached sequence list, y represents C/T, s represents G/C, r represents A/G), which is used for the cloning of the cDNA fragment of the ω3 FAD gene of Chlorella nickers. PCR amplification was then performed using the following reaction system and procedures. 25 μL reaction system contains: 10×PCR buffer 2.5 μL, 2 μL of dNTP (10 mM each), 1.0 μL of each primer (10 μM), 1.0 μL of template, 0.5 μL of Taq enzyme (TaKaRa Company), 17 μL of RNase-free water. The PCR reaction program was: pre-denaturation at 94°C for 2 min, followed by 30 cycles including denaturation at 94°C for 30 s, annealing at 58°C for 30 s, extension at 72°C for 1 min, and finally extension at 72°C for 10 min. After recovering and purifying the gel of the PCR product, it was connected with the pMD19T vector (Promega Company) and then transferred into E. coli DH5α competent cells to screen positive clones. After colony PCR verification, the positive clones were sent to Shanghai Sunny Biotechnology Co., Ltd. for sequencing Obtain the sequence of the ω3 FAD gene fragment of Chlorella notchi.
(4)根据获得的缺刻缘绿藻ω3 FAD基因cDNA片段序列设计基因特异性引物:GSP 1(SEQ ID NO.3):5’-ATGTGTGCGGTGGCTGATCCTCCAGC-3’, (4) Design gene-specific primers based on the obtained cDNA fragment sequence of the ω3 FAD gene of Chlorella nickers: GSP 1 (SEQ ID NO.3): 5'-ATGTGTGCGGTGGCTGATCCTCCAGC-3',
GSP 2(SEQ ID NO.4):5’-CTTCTCCAGCAACAAGACGCTCAACAAC-3’。根据SMARTTM RACE cDNA扩增试剂盒(Clontech公司)的使用说明分别建立5′-RACE和3′-RACE反转录体系,然后根据降落PCR原理进行扩增。25 μL的 5′-RACE反应体系包括:17 μL的PCR级水、2.5 μL的10×Advantage 2 PCR缓冲液、0.5 μL的dNTPs、0.5 μL GSP1、2.5 μL的10×UPM、1.5 μL的5′-RACE 模板即步骤(2)获得的cDNA第一链、0.5 μL的50×Advantage 2聚合酶混合液。3′-端的反应体系除0.5 μL的GSP 2和1.5 μL的3′-RACE cDNA外,其它的同5′-端反应体系。反应程序为:94℃变性30 s,72℃延伸150 s,5个循环;94℃变性30 s,70℃退火30 s,72℃延伸150 s,5个循环;94℃变性30 s,68℃退火30 s,72℃延伸150 s,30个循环;72℃延伸7 min。然后电泳检测、胶回收纯化、TA克隆并测序,序列拼接获得缺刻缘绿藻ω3 FAD基因的cDNA全长序列。
GSP 2 (SEQ ID NO. 4): 5'-CTTCTCCAGCAACAAGACGCTCAACAAC-3'. The 5′-RACE and 3′-RACE reverse transcription systems were respectively established according to the instructions of the SMART TM RACE cDNA Amplification Kit (Clontech Company), and then amplified according to the principle of touchdown PCR. 25 μL of 5′-RACE reaction system includes: 17 μL of PCR grade water, 2.5 μL of 10×
(5)根据步骤(4)获得的缺刻缘绿藻ω3 FAD基因的cDNA全长序列,分别在该基因的5′-UTR和3′-UTR设计引物:上游引物(SEQ ID NO.5):5’- AAACCCGGCAACAATGCA-3’,下游引物(SEQ ID NO.6):5’-AGAATCAGAACCCGAAGC-3’,克隆ω3 FAD基因的DNA全长序列。25 μL的PCR扩增反应体系包含2.5 μL的10×PCR缓冲液,2 μL的dNTP(各10 mM),1.5 μL的Mg2+(25 mM),各1.0 μL的引物(10 μM),1.0 μL模板,0.5 μL Taq酶(TaKaRa公司)及无RNase水15.5 μL。PCR反应程序为:94℃预变性5 min;然后35个循环包括94℃变性1 min,55℃退火1 min,72℃延伸2 min;最后72℃延伸10 min。以上PCR产物经回收纯化后,均作TA克隆,选择阳性克隆送至上海桑尼生物有限公司测序得到缺刻缘绿藻ω3 FAD基因的DNA全长序列。 (5) According to the full-length cDNA sequence of the ω3 FAD gene of Chlorella nickifolia obtained in step (4), design primers at the 5′-UTR and 3′-UTR of the gene: upstream primer (SEQ ID NO.5): 5'-AAACCCGGCAACAATGCA-3', downstream primer (SEQ ID NO.6): 5'-AGAATCAGAACCCGAAGC-3', clone the full-length DNA sequence of ω3 FAD gene. 25 μL of PCR amplification reaction system contains 2.5 μL of 10×PCR buffer, 2 μL of dNTP (10 mM each), 1.5 μL of Mg 2+ (25 mM), 1.0 μL of primers (10 μM), 1.0 μL template, 0.5 μL Taq enzyme (TaKaRa company) and 15.5 μL RNase-free water. The PCR reaction program was: pre-denaturation at 94°C for 5 min; then 35 cycles including denaturation at 94°C for 1 min, annealing at 55°C for 1 min, and extension at 72°C for 2 min; finally, extension at 72°C for 10 min. After the above PCR products were recovered and purified, they were all cloned by TA, and the positive clones were selected and sent to Shanghai Sunny Biological Co., Ltd. for sequencing to obtain the full-length DNA sequence of the ω3 FAD gene of Chlorella nickedlis.
(6)根据pYES2载体(Promega公司)和缺刻缘绿藻ω3 FAD基因的ORF序列设计引物:上游引物(SEQ ID NO.7):5’-cgGAATTCATGCAGGCCCCCACTATGT-3’,下游引物(SEQ ID NO.8):5’-gcTCTAGACTACACATCCGAGCCACTG-3’,其中,斜体GAATTC和斜体TCTAGA分别代表EcoRI和XbaI的酶切位点。以缺刻缘绿藻ω3 FAD cDNA为模板进行PCR扩增。反应体系如下:2.5 μL的10×PCR缓冲液,2 μL的dNTPs,1.5 μL的Mg2+(25 mM),1.0 μL模板,上下游引物各1 μL,16 μL的无RNase水,0.25 μL的Taq酶(5U/μL)。PCR反应条件为:95℃预变性5 min;36个循环包含94℃变性1 min、66℃退火1 min;72℃延伸2min,最后72℃延伸7 min。PCR产物经回收纯化后作TA克隆后,送阳性克隆至上海桑尼生物有限公司测序确保序列的准确性。 (6) Design primers according to the pYES2 vector (Promega Company) and the ORF sequence of the ω3 FAD gene of Chlorella nickers: upstream primer (SEQ ID NO.7): 5'-cg GAATTC ATGCAGGCCCCCACTATGT-3', downstream primer (SEQ ID NO. .8): 5'-gc TCTAGA CTACACATCCGAGCCACTG-3', wherein, italic GAATTC and italic TCTAGA represent the restriction sites of Eco RI and Xba I, respectively. PCR amplification was carried out using the ω3 FAD cDNA of Chlorella nicklis as a template. The reaction system is as follows: 2.5 μL of 10×PCR buffer, 2 μL of dNTPs, 1.5 μL of Mg 2+ (25 mM), 1.0 μL of template, 1 μL of upstream and downstream primers, 16 μL of RNase-free water, 0.25 μL of Taq enzyme (5U/μL). The PCR reaction conditions were: pre-denaturation at 95°C for 5 min; 36 cycles including denaturation at 94°C for 1 min and annealing at 66°C for 1 min; extension at 72°C for 2 min, and finally extension at 72°C for 7 min. After the PCR products were recovered and purified for TA cloning, the positive clones were sent to Shanghai Sunny Biological Co., Ltd. for sequencing to ensure the accuracy of the sequence.
(7)从大肠杆菌DH5α中抽提pMD19T-ω3 FAD质粒,用限制性内切酶EcoR和XbaI进行双酶切消化反应,同时对pYES2质粒也进行EcoR / XbaI双酶切反应。反应体系为:4 μL的10×M缓冲液,4 μL的0.1% BSA,DNA≤2 μg,EcoR及XbaI各1 μL,加无RNase水至20 μL。37℃消化反应4 h。割胶回收酶切后的目的片段,并用T4 DNA连接酶将酶切后的ω3 FAD基因片段与pYES2片段连接得到重组载体pY-ω3 FAD。连接反应体系为:2.5 μL的缓冲液,ω3 FAD基因DNA片段约0.3 pmol,载体pYES2的DNA消化片段约0.03 pmol,1 μL的T4 DNA连接酶,加无RNase水至25 μL。16℃连接过夜。连接后转化大肠杆菌DH5α感受态细胞,按照上述方法进行克隆、菌落PCR验证和测序。从大肠杆菌DH5α中抽提pY-ω3 FAD质粒,-20℃保存备用。 (7) Extract the pMD19T-ω3 FAD plasmid from Escherichia coli DH5α, and use the restriction endonuclease Eco R Perform double enzyme digestion with Xba I, and Eco R for pYES2 plasmid / Xba I double enzyme digestion reaction. The reaction system is: 4 μL of 10×M buffer, 4 μL of 0.1% BSA, DNA≤2 μg, Eco R and Xba I each 1 μL, add RNase-free water to 20 μL. The digestion reaction was carried out at 37°C for 4 h. The digested target fragment was recovered by tapping the rubber, and the digested ω3 FAD gene fragment was ligated with the pYES2 fragment with T 4 DNA ligase to obtain the recombinant vector pY-ω3 FAD. The ligation reaction system was: 2.5 μL of buffer, about 0.3 pmol of ω3 FAD gene DNA fragment, about 0.03 pmol of DNA digested fragment of vector pYES2, 1 μL of T4 DNA ligase, and RNase-free water to 25 μL. Ligation overnight at 16°C. After ligation, Escherichia coli DH5α competent cells were transformed, and cloning, colony PCR verification and sequencing were carried out according to the above method. The pY-ω3 FAD plasmid was extracted from Escherichia coli DH5α and stored at -20°C for future use.
(8)酵母感受态细胞的制备。将酵母接种于YPD培养基中,28℃复苏培养过夜,然后按1:100放大培养,以250 rpm转速振荡培养至细胞密度约为1×108细胞/mL(约4-5 h)。冰上冷却15 min使细胞停止生长,4℃条件下以5 000 rpm转速离心5 min收集酵母细胞,预冷无菌水洗涤细胞2次,同样条件下离心收集。20 mL预冷的1 M山梨醇洗涤细胞1次,然后溶于0.5 mL预冷的1 M山梨醇,调整细胞的浓度在1×1010细胞/mL。冰上保存细胞(或是4℃),便于电击使用。 (8) Preparation of yeast competent cells. The yeast was inoculated in YPD medium, revived at 28°C overnight, then scaled up at 1:100, and cultured with shaking at 250 rpm until the cell density was about 1×10 8 cells/mL (about 4-5 h). Cool on ice for 15 min to stop the cell growth, collect yeast cells by centrifugation at 5 000 rpm for 5 min at 4°C, wash the cells twice with pre-cooled sterile water, and collect by centrifugation under the same conditions. Wash the cells once with 20 mL of pre-cooled 1 M sorbitol, then dissolve in 0.5 mL of pre-cooled 1 M sorbitol, and adjust the cell concentration to 1×10 10 cells/mL. Store cells on ice (or 4°C) for electroporation.
(9)电穿孔仪(Bio-Rad)电击,将重组的载体pY-ω3 FAD转化酵母感受态细胞。取在冰上预冷的待转化的pY-ω3 FAD重组质粒DNA约5-10 μL (5-200 ng)与感受态细胞混匀,并与0.2 cm的电击杯一起冰上预冷,然后将DNA-细胞混合液转移到预冷的电击杯轻轻混匀,冰浴5 min后,选择程序Sc2电击一次,移走电击杯,立刻加入1 mL预冷的1M山梨醇,轻轻转移到新的YPD培养基中,28℃轻微振荡5h,将菌液涂布于含有1 M山梨醇的尿嘧啶缺陷合成培养基(SC-U)上,28℃倒置静置培养48-72 h,挑取菌落于液体SC-U培养基中培养。菌落PCR验证后,用含2%葡萄糖或2%棉籽糖的SC-U培养基保存菌种。 (9) The electroporator (Bio-Rad) was electroporated, and the recombinant vector pY-ω3 FAD was transformed into yeast competent cells. Take about 5-10 μL (5-200 ng) of the pY-ω3 FAD recombinant plasmid DNA to be transformed that was pre-cooled on ice and mix it with the competent cells, and pre-cool on ice with a 0.2 cm electric shock cup, and then put Transfer the DNA-cell mixture to a pre-cooled electric shock cup and mix gently. After 5 min of ice bath, select program Sc2 to shock once, remove the electric shock cup, immediately add 1 mL of pre-cooled 1M sorbitol, and gently transfer to a new In the YPD medium of YPD medium, shake slightly at 28°C for 5h, spread the bacterial solution on the uracil-deficient synthetic medium (SC-U) containing 1 M sorbitol, and culture it upside down at 28°C for 48-72h, pick Colonies were cultured in liquid SC-U medium. After colony PCR verification, the strains were preserved in SC-U medium containing 2% glucose or 2% raffinose.
(10)将保存的菌液接种YPD培养基中,28℃下以220 rpm转速振荡培养。然后离心收集菌液,重悬于2%半乳糖的YPD培养基中,分别加入底物LA(C18:2ω6)和ArA(C20:4ω6)至终浓度为0.005%(170 μM-180 μM),并加入表面活性剂1% Tergitol type NP-40,10℃下以150 rpm转速振荡培养72 h。离心收集酵母菌体,经去离子水洗涤3次后液氮冻存。
(10) Inoculate the preserved bacterial liquid into the YPD medium, shake and cultivate at 220 rpm at 28°C. Then the bacterial liquid was collected by centrifugation, resuspended in YPD medium with 2% galactose, and the substrates LA (C18:2ω6) and ArA (C20:4ω6) were added respectively to a final concentration of 0.005% (170 μM-180 μM). And add
(11)将液氮冻存的酵母冷冻干燥,然后进行脂肪酸甲酯化。称取约25 mg酵母粉末于酯化瓶中,加入2 ml含2%硫酸的甲醇溶液。充氮气后,于82℃水浴锅酯化反应1 h,便于将结合的脂肪酸分子充分解离并甲基化。酯化反应后,向上述酯化瓶中分别加入1 mL去离子水和1 mL正己烷,充分混匀,然后在5500 rpm下离心10 min。收集上清液至样品瓶中,氮气浓缩,4℃保存备用。 (11) Freeze-dry the yeast frozen in liquid nitrogen, and then perform fatty acid methylation. Weigh about 25 mg of yeast powder into an esterification bottle, and add 2 ml of methanol solution containing 2% sulfuric acid. After being filled with nitrogen, the esterification reaction was carried out in a water bath at 82°C for 1 h, so as to fully dissociate and methylate the combined fatty acid molecules. After the esterification reaction, add 1 mL of deionized water and 1 mL of n-hexane to the above-mentioned esterification bottle, mix well, and then centrifuge at 5500 rpm for 10 min. The supernatant was collected into a sample bottle, concentrated with nitrogen, and stored at 4°C for later use.
(12)采用Angilent 6890 plus型气相色谱仪进行脂肪酸组成分析,色谱柱为HP-5型毛细管柱(30 m×0.25 mm);升温程序为50℃保留1 min,25℃/min升温至200℃,然后3℃/min升温至230℃,最后保留18 min;分流比为50:1;氮气、氢气、空气的流速分别为30 mL/min、450 mL/min、40 mL/min。进样量为1 μL。 (12) Analyzing the composition of fatty acids with an Angilent 6890 plus gas chromatograph, the chromatographic column is a HP-5 capillary column (30 m×0.25 mm); the heating program is 50°C for 1 min, and the temperature is raised to 200°C at 25°C/min , and then heated up to 230°C at 3°C/min, and finally kept for 18 min; the split ratio was 50:1; the flow rates of nitrogen, hydrogen, and air were 30 mL/min, 450 mL/min, and 40 mL/min, respectively. The injection volume was 1 μL.
(13)GC-MS检测生成的产物。GC的色谱柱为HP-INNOWax Polyethylene Glyco(30 m×320 μm×0.25 μm),连接MS四级杆,150 C(最大值200 C)。升温程序50℃保持1 min,以10℃/min升到150℃后保持1 min,然后再以4℃/min升到230℃后再保持5 min,运行时间37 min。氦为载气体,初始值50℃,压力7.6522 psi,流速2.6891 mL/min,平均速率59.763 cm/s,滞留时间0.83664 min,流速2.6891 mL/min,运行时间37 min。MS采集参数选用EMV模式,跟踪检测的离子能为69.922 eV。 (13) GC-MS detection of the generated products. The chromatographic column of GC is HP-INNOWax Polyethylene Glyco (30 m×320 μm×0.25 μm), connected to MS quadrupole, 150 C (maximum 200 C). The heating program is 50°C for 1 min, 10°C/min to 150°C and then 1 min, then 4°C/min to 230°C and then 5 min, and the running time is 37 min. Helium is the carrier gas, the initial value is 50°C, the pressure is 7.6522 psi, the flow rate is 2.6891 mL/min, the average velocity is 59.763 cm/s, the residence time is 0.83664 min, the flow rate is 2.6891 mL/min, and the running time is 37 min. The EMV mode was selected as the MS acquisition parameter, and the ion energy tracked and detected was 69.922 eV.
3、结果 3. Results
(1)利用RACE方法扩增得到ω3 FAD基因的ORF序列,5′-和3′-末端RACE扩增和特异性目的条带的电泳图谱如图1所示。图中,M代表DL 2000分子量标准;A图为5’-末端产物,长度为650 bp;C 图为3’-末端产物,长度为1759 bp;B图为目的条带,长度为671 bp。经测序得到ω3 FAD基因的ORF序列如SEQ ID NO.9所示。克隆并测序得到DNA全长序列如SEQ ID NO.10所示。缺刻缘绿藻ω3 FAD基因全长结构如图2所示。 (1) The ORF sequence of the ω3 FAD gene was amplified by the RACE method. The 5′- and 3′-terminal RACE amplification and the electrophoretic pattern of the specific target band are shown in Figure 1. In the figure, M stands for DL 2000 molecular weight standard; A picture shows the 5'-end product, the length is 650 bp; C picture shows the 3'-end product, the length is 1759 bp; B picture shows the target band, the length is 671 bp. The ORF sequence of the ω3 FAD gene obtained by sequencing is shown in SEQ ID NO.9. The full-length DNA sequence obtained by cloning and sequencing is shown in SEQ ID NO.10. The full-length structure of the ω3 FAD gene of Chlorella notch margin is shown in Figure 2.
(2)选用pYES2载体通过限制性内切酶EcoR 和Xba I的基因操作,成功地构建了ω3 FAD基因的表达载体pY-ω3 FAD。将ω3 FAD基因组装在pYES2载体的GAL1启动子下游,应用半乳糖诱导基因过表达。 (2) Use the pYES2 vector to pass the restriction endonuclease Eco R Gene manipulation with Xba I successfully constructed the expression vector pY-ω3 FAD of ω3 FAD gene. The ω3 FAD gene was assembled downstream of the GAL1 promoter of the pYES2 vector, and galactose was used to induce gene overexpression.
(3)采用电穿孔仪电击的方法成功地将重组的表达载体pY-ω3 FAD导入酵母INVSc1中。由于酵母INVSc1是His–、Leu–、Trp–、Ura–缺陷型菌株,而pYES2载体上有编码尿嘧啶的URA3基因,因而转入pY-ω3 FAD质粒的酵母能够在尿嘧啶缺陷的合成培养基(SC-U)上生长,进而筛选获得转基因的酵母细胞。 (3) The recombinant expression vector pY-ω3 FAD was successfully introduced into yeast INVSc1 by electroporation. Since the yeast INVSc1 is a His – , Leu – , Trp – , Ura – deficient strain, and the pYES2 vector has the URA3 gene encoding uracil, the yeast transformed with the pY-ω3 FAD plasmid can grow in the uracil-deficient synthetic medium (SC-U), and then screened to obtain transgenic yeast cells.
(4)培养基中分别添加外源底物LA和ArA,经半乳糖诱导后,GC-MS检测酵母甲酯化的脂肪酸。未添加底物组的酵母脂肪酸成分检测结果如图3所示,图中箭头指示酵母自身合成的脂肪酸成分;添加底物LA(C18:2Δ9, 12)组的酵母脂肪酸成分检测结果如图4所示,图中粗箭头指示的是添加的外源脂肪酸底物,细箭头指示其产物。在图3和图4中,a代表野生型对照组,b代表转空载体对照组,c代表含有ω3 FAD的转基因酵母pY-ω3 FAD组。GC-MS图谱如图5所示。 (4) Exogenous substrates LA and ArA were added to the culture medium, and after induction by galactose, GC-MS was used to detect the methylated fatty acids of yeast. The detection results of the yeast fatty acid components in the group without substrate addition are shown in Figure 3, and the arrows in the figure indicate the fatty acid components synthesized by the yeast itself; the detection results of the yeast fatty acid components in the group with the addition of substrate LA (C18:2 Δ9, 12 ) are shown in Figure 4 As shown, the thick arrow in the figure indicates the added exogenous fatty acid substrate, and the thin arrow indicates its product. In Figure 3 and Figure 4, a represents the wild-type control group, b represents the empty vector control group, and c represents the transgenic yeast pY-ω3 FAD group containing ω3 FAD. The GC-MS spectrum is shown in Figure 5.
比较了转基因酵母在添加不同脂肪酸底物培养后,细胞中脂肪酸组分的含量(占总脂肪酸 %),结果如表1所示: The content of fatty acid components in cells (% of total fatty acids) after the transgenic yeast was cultured with different fatty acid substrates was compared, and the results are shown in Table 1:
表1 Table 1
从表1中可以看出,ω3 FAD基因表达产物在酵母中能将外源LA(C18:2ω6)去饱和为ALA(C18:3ω3),转化效率为27.77%,同时该基因编码的蛋白对ArA没有去饱和作用。这些结果表明,自缺刻缘绿藻中克隆到的ω3 FAD基因所编码的FAD对底物具有选择特异性,可只将LA(C18:2ω6)去饱和为ALA(C18:3ω3),因而该基因编码的去饱和酶属于ω3 FAD中的Δ15 FAD。 It can be seen from Table 1 that the expression product of ω3 FAD gene can desaturate exogenous LA (C18:2ω6) into ALA (C18:3ω3) in yeast, and the conversion efficiency is 27.77%. No desaturation. These results indicated that the FAD encoded by the ω3 FAD gene cloned from Chlorella nicki has selectivity for substrates and can only desaturate LA (C18:2ω6) to ALA (C18:3ω3), thus the gene The encoded desaturase belongs to the Δ15 FAD of the ω3 FAD.
以上所述仅是本发明的优选实施方式,应当指出,对于本技术领域的普通技术人员,在不脱离本发明方法的前提下,还可以做出若干改进和补充,这些改进和补充也应视为本发明的保护范围。 The above is only a preferred embodiment of the present invention, it should be pointed out that for those of ordinary skill in the art, without departing from the method of the present invention, some improvements and supplements can also be made, and these improvements and supplements should also be considered Be the protection scope of the present invention.
SEQUENCE LISTING SEQUENCE LISTING
<110> 上海海洋大学 <110> Shanghai Ocean University
新奥科技发展有限公司 ENN Technology Development Co., Ltd.
<120> 一种编码缺刻缘绿藻Δ15脂肪酸去饱和酶的DNA序列及其应用 <120> A DNA Sequence Encoding Δ15 Fatty Acid Desaturase of Chlorella nickifolia and Its Application
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<213> 缺刻缘绿藻(Myrmecia incisa) <213> Myrmecia incisa
<400> 9 <400> 9
atgcaggccc ccactatgtc tacgacaggt gcactgtatc tgggccgccc tgtggtgctg 60 atgcaggccc ccactatgtc tacgacaggt gcactgtatc tgggccgccc tgtggtgctg 60
cgcgctggac actcgcgccc cagagccaat gcgcttttgc agagcggtcg gaggcaagcg 120 cgcgctggac actcgcgccc cagagccaat gcgcttttgc agagcggtcg gaggcaagcg 120
ttgcacgtgg tgaacatcgc cgcagcccca ccggccccgc aacgtgcacc cgggcaggaa 180 ttgcacgtgg tgaacatcgc cgcagcccca ccggccccgc aacgtgcacc cgggcaggaa 180
gaaggcattc ctagaccagc ctatgtcgac gagactggtt atggacgtgc cgctccaccg 240 gaaggcattc ctagaccagc ctatgtcgac gagactggtt atggacgtgc cgctccaccg 240
cccttcacgc tagctgatat caaggcagca gtgcctgctc actgctggaa gaagagcacg 300 cccttcacgc tagctgatat caaggcagca gtgcctgctc actgctggaa gaagagcacg 300
tggcgctcga tggccttcct ggcccgcgat gtgggcgtgg tggcggcgct ggctgtggga 360 tggcgctcga tggccttcct ggcccgcgat gtgggcgtgg tggcggcgct ggctgtggga 360
gcctacactc tgaacgcctg gtgggcgtgg ccgctgtact gggtggcaca ggggacgatg 420 gcctacactc tgaacgcctg gtgggcgtgg ccgctgtact gggtggcaca ggggacgatg 420
ttctgggccc tctttgtggt cgggcatgac tgcggccatc agagcttctc cagcaacaag 480 ttctgggccc tctttgtggt cgggcatgac tgcggccatc agagcttctc cagcaacaag 480
acgctcaaca acctggtggg caacatcaca cactcgtcca tcctggtgcc ctaccacggc 540 acgctcaaca acctggtggg caacatcaca cactcgtcca tcctggtgcc ctaccacggc 540
tggaggatca gccaccgcac acatcatgcc aaccatggac atgtcgagaa cgatgagtcc 600 tggaggatca gccaccgcac acatcatgcc aaccatggac atgtcgagaa cgatgagtcc 600
tggcatcctg tcagcaagcg gatatacaac cagatggaat ccatggccaa gattggtcgg 660 tggcatcctg tcagcaagcg gatatacaac cagatggaat ccatggccaa gattggtcgg 660
ctggcgttcc cgctgccgct gtttgcctac cccttttacc tgtggcagcg gtcgcctggc 720 ctggcgttcc cgctgccgct gtttgcctac cccttttacc tgtggcagcg gtcgcctggc 720
aagacaggct cacactatga ccccaagtgc gacctttttg tgccgcagga agcccccatg 780 aagacaggct cacactatga ccccaagtgc gacctttttg tgccgcagga agcccccatg 780
atccgcacgt ccaacgcatt catgctgggc atgctcgcca tcctgggcgc atgcacatac 840 atccgcacgt ccaacgcatt catgctgggc atgctcgcca tcctgggcgc atgcacatac 840
gcgctgggcc cgctggccat gttcaacctg tacttcatcc catacgtcat caacgtggtc 900 gcgctgggcc cgctggccat gttcaacctg tacttcatcc catacgtcat caacgtggtc 900
tggctggacg ccgtcaccta cctgcatcac catgggccgc atgacgagaa cgagaagatc 960 tggctggacg ccgtcaccta cctgcatcac catgggccgc atgacgagaa cgagaagatc 960
ccctggtacc gtggcgagga gtggagctac ctgcgcggcg gcctgtccac catcgaccgc 1020 ccctggtacc gtggcgagga gtggagctac ctgcgcggcg gcctgtccac catcgaccgc 1020
gattttggca tcttcaacca catccaccac gacattggca cgcacgtgct gcaccacctg 1080 gattttggca tcttcaacca catccaccac gacattggca cgcacgtgct gcaccacctg 1080
ttcccccaga tcccgcacta ccacctggtg gaggcgaccg aggccgtcaa gccggtgttt 1140 ttcccccaga tcccgcacta ccacctggtg gaggcgaccg aggccgtcaa gccggtgttt 1140
ggcaactact accgcgagcc cgagccctcc ccgggcccca tcccgaccca tctgttcaag 1200 ggcaactact accgcgagcc cgagccctcc ccgggcccca tcccgaccca tctgttcaag 1200
cccctcatgc gcagctttgc gcaggaccac tatgtcgagg atgagggcga cattgtgtac 1260 cccctcatgc gcagctttgc gcaggacac tatgtcgagg atgagggcga cattgtgtac 1260
tataagactg accccaagct gaaccatctg gccagtggct cggatgtgta g 1311 tataagactg accccaagct gaaccatctg gccagtggct cggatgtgta g 1311
<210> 10 <210> 10
<211> 3443 <211> 3443
<212> DNA <212> DNA
<213> 缺刻缘绿藻(Myrmecia incisa) <213> Myrmecia incisa
<400> 10 <400> 10
actttcaaat tgaacagccc ccctggcgtg cactgccagc ctcaggttgc tgcgcttcct 60 actttcaaat tgaacagccc ccctggcgtg cactgccagc ctcaggttgc tgcgcttcct 60
gtgcctaaca aggacgtggg ttgtcccgac gtgcaaaccc ggcaacaatg caggccccca 120 gtgcctaaca aggacgtggg ttgtcccgac gtgcaaaccc ggcaacaatg caggccccca 120
ctatgtctac gacaggtgca ctgtatctgg gccgccctgt ggtgctgcgc gctggacact 180 ctatgtctac gacaggtgca ctgtatctgg gccgccctgt ggtgctgcgc gctggacact 180
cgcgccccag agccaatgcg cttttgcaga gcggtcggag gcaagcgttg cacgtgtgaa 240 cgcgccccag agccaatgcg cttttgcaga gcggtcggag gcaagcgttg cacgtgtgaa 240
catcgccgca gccccctaga ccagcctatg tcgacgaggt gagagctgaa ggcgctgaag 300 catcgccgca gccccctaga ccagcctatg tcgacgaggt gagagctgaa ggcgctgaag 300
gacagcacgc tgttaatgcg tcgtaccact gcaaggagca cttggaggtg gtgtcgacgt 360 gacagcacgc tgttaatgcg tcgtaccact gcaaggagca cttggaggtg gtgtcgacgt 360
gacgttcagc aagcctcaac ctggctctgc gctgtcccaa gctgtttgct gggctcaagc 420 gacgttcagc aagcctcaac ctggctctgc gctgtcccaa gctgtttgct gggctcaagc 420
gtggcggcgg gcggatcata tggggctatg ttgactgctc ttggttggca acccctaatt 480 gtggcggcgg gcggatcata tggggctatg ttgactgctc ttggttggca acccctaatt 480
tgcactggca ctgatctacg acgcacctgc aggctgacta cagttgggct gcacaccgat 540 tgcactggca ctgatctacg acgcacctgc aggctgacta cagttgggct gcacaccgat 540
ctaacatcgg tgcataagtc agtgctagtg cttgcagaca tcgcttgctg aaacatgctt 600 ctaacatcgg tgcataagtc agtgctagtg cttgcagaca tcgcttgctg aaacatgctt 600
tttgttggct gctgtcagac tggttatgga cgtgccgctc caccgccctt cacgctagct 660 tttgttggct gctgtcagac tggttatgga cgtgccgctc caccgccctt cacgctagct 660
gatatcaagg cagcagtgcc tgctcactgc tggaagaaga gcacgtggcg ctcgatggcc 720 gatatcaagg cagcagtgcc tgctcactgc tggaagaaga gcacgtggcg ctcgatggcc 720
ttcctggccc gcgatgtggg cgtggtggcg gcgctggctg tgggagccta cactctgaac 780 ttcctggccc gcgatgtggg cgtggtggcg gcgctggctg tgggagccta cactctgaac 780
gcctggtgag cactttcata gcacaccctt ccagagtgct tttgacttga gctggggtca 840 gcctggtgag cactttcata gcacaccctt ccagagtgct tttgacttga gctggggtca 840
aaggccacca catggaggtc ctcctggtta tgaaccacaa acagccctcc agttgcatgc 900 aaggccacca catggaggtc ctcctggtta tgaaccacaa acagccctcc agttgcatgc 900
tgccaaggcg tcacgcaggc atgccgcttt tgcttgatgc agggtgcaca gctgcagctc 960 tgccaaggcg tcacgcaggc atgccgcttt tgcttgatgc agggtgcaca gctgcagctc 960
tcggtgctgt tctgactgta tgctgggtgg cacaggtggg cgtggccgct gtactgggtg 1020 tcggtgctgt tctgactgta tgctgggtgg cacaggtggg cgtggccgct gtactgggtg 1020
gcacagggga cgatgttctg ggccctcttt gtggtcgggc atgactggta aggccagata 1080 gcacaggggga cgatgttctg ggccctcttt gtggtcgggc atgactggta aggccagata 1080
tatgcagctt tggaggcgat tgtcacatgc ctttgataag cgggcgtctg gaggcttggc 1140 tatgcagctt tggaggcgat tgtcacatgc ctttgataag cgggcgtctg gaggcttggc 1140
ggtagctgag ccgtactgac acgccctgtt gttgtatgca gcggccatca gagcttctcc 1200 ggtagctgag ccgtactgac acgccctgtt gttgtatgca gcggccatca gagcttctcc 1200
agcaacaaga cgctcaacaa cctggtgggc aacatcacac actcgtccat cctggtgccc 1260 agcaacaaga cgctcaacaa cctggtgggc aacatcacac actcgtccat cctggtgccc 1260
taccacggct ggaggatcag ccaccgcaca catcatgcca accatggaca tgtcgagaac 1320 taccacggct ggaggatcag ccaccgcaca catcatgcca accatggaca tgtcgagaac 1320
gatgagtcct ggcatcctgt cagcaagcgg atatacaacc agatggtgcg cagcgcttcc 1380 gatgagtcct ggcatcctgt cagcaagcgg atatacaacc agatggtgcg cagcgcttcc 1380
gcagtgaaac tagcagctgg gttccttggc attacctaag catgcctgca caatgtttcg 1440 gcagtgaaac tagcagctgg gttccttggc attacctaag catgcctgca caatgtttcg 1440
atgacactgc tgctcgctgg agcggtagct agtgctgcgg atgagtgaag aagctgcggt 1500 atgacactgc tgctcgctgg agcggtagct agtgctgcgg atgagtgaag aagctgcggt 1500
gctctgcagg aatccatggc caagattggt cggctggcgt tcccgctgcc gctgtttgcc 1560 gctctgcagg aatccatggc caagattggt cggctggcgt tcccgctgcc gctgtttgcc 1560
tacccctttt acctgtggca gcggtcgcct ggcaagacag gctcacacta tgaccccaag 1620 tacccctttt acctgtggca gcggtcgcct ggcaagacag gctcacacta tgaccccaag 1620
tgcgaccttt ttgtgccgca ggaagccccc atggtgaggc caggctcaat cttgtgattg 1680 tgcgaccttt ttgtgccgca ggaagccccc atggtgaggc caggctcaat cttgtgattg 1680
tgcagctgcc aggatgtgga ttgccttggt gggctgttgt tgcccaagtg gctttgttga 1740 tgcagctgcc aggatgtgga ttgccttggt gggctgttgt tgcccaagtg gctttgttga 1740
ttgcttagta ccttgtccat gccccatgcg tagctggcca ggtgtccttc tgttggcaat 1800 ttgcttagta ccttgtccat gccccatgcg tagctggcca ggtgtccttc tgttggcaat 1800
gccccagctc tttccacaga gtgatgccct gatgtctgtc atgctgcatg cagatccgca 1860 gccccagctc tttccacaga gtgatgccct gatgtctgtc atgctgcatg cagatccgca 1860
cgtccaacgc attcatgctg ggcatgctcg ccatcctggg cgcatgcaca tacgcgctgg 1920 cgtccaacgc attcatgctg ggcatgctcg ccatcctggg cgcatgcaca tacgcgctgg 1920
gcccgctggc catgttcaac ctgtacttca tcccatacgt catcaacgtg gtctggctgg 1980 gcccgctggc catgttcaac ctgtacttca tcccatacgt catcaacgtg gtctggctgg 1980
acgccgtcac ctacctgcat caccatgggc cgcatgacga gaacgagaag atcccctggt 2040 acgccgtcac ctacctgcat caccatgggc cgcatgacga gaacgagaag atcccctggt 2040
accgtggcga ggtgaggcga tggtgctacc ctttgaaata tgttggactt gctactggga 2100 accgtggcga ggtgaggcga tggtgctacc ctttgaaata tgttggactt gctactggga 2100
tcttaacaac attcttgtat ggacggctgc tgtctgcaca acatcttggc gcagtgccat 2160 tcttaacaac attcttgtat ggacggctgc tgtctgcaca acatcttggc gcagtgccat 2160
ttgctgcagc atcatgtcaa gctgacatgt tgggacctct gcgaattggg ccctaagccg 2220 ttgctgcagc atcatgtcaa gctgacatgt tgggacctct gcgaattggg ccctaagccg 2220
tagtcgtctc gtggcaggag tggagctacc tgcgcggcgg cctgtccacc atcgaccgcg 2280 tagtcgtctc gtggcaggag tggagctacc tgcgcggcgg cctgtccacc atcgaccgcg 2280
attttggcat cttcaaccac atccaccacg acattggcac gcacgtgctg caccacctgt 2340 attttggcat cttcaaccac atccaccacg attggcac gcacgtgctg caccacctgt 2340
tcccccagat cccgcactac cacctggtgg aggcgaccga ggccgtcaag ccggtgtttg 2400 tccccccagat cccgcactac cacctggtgg aggcgaccga ggccgtcaag ccggtgtttg 2400
gcaactacta ccgcgagccc gagccctccc cgggccccat cccgacccat ctgttcaagc 2460 gcaactacta ccgcgagccc gagccctccc cgggccccat cccgacccat ctgttcaagc 2460
ccctcatgcg cagctttgcg caggaccact atgtcgagga tgagggcgac attgtgtact 2520 ccctcatgcg cagctttgcg caggaccact atgtcgagga tgagggcgac attgtgtact 2520
ataagactga ccccaagctg aaccatctgg ccagtggctc ggatgtgtag acggccccag 2580 ataagactga ccccaagctg aaccatctgg ccagtggctc ggatgtgtag acggccccag 2580
cgcatgagcc caggtgcaag gcccgcaatg gctgggtcag cacatacacg ggcagggcgc 2640 cgcatgagcc caggtgcaag gcccgcaatg gctgggtcag cacataacg ggcagggcgc 2640
ccattcctgt ttgtcactgg gtcttgcgcg gataacaaaa catggcttgg aagcttgggg 2700 ccattcctgt ttgtcactgg gtcttgcgcg gataacaaaa catggcttgg aagcttgggg 2700
tcttcacggg gcgtgctgct ttagggttct atggcgcagg tcgccttggc caatagttgg 2760 tcttcacggg gcgtgctgct ttagggttct atggcgcagg tcgccttggc caatagttgg 2760
agcagggcag gagctgtgtc ttgcggcttt accaaagagc agtgcagcag catgtgctgt 2820 agcagggcag gagctgtgtc ttgcggcttt accaaagagc agtgcagcag catgtgctgt 2820
cagcataggg taagggcggg cgtgctacca ataatgtgtt gcgctgccag tcgctgacat 2880 cagcataggg taagggcggg cgtgctacca ataatgtgtt gcgctgccag tcgctgacat 2880
gtatcgggct gctgcacgag agtgcacagg tgtttgctgt ctctatgcca ggcagctttg 2940 gtatcgggct gctgcacgag agtgcacagg tgtttgctgt ctctatgcca ggcagctttg 2940
tggttgcata gcgtagtccc aaacagtgca tgcaaccaat agctgcccag cgttgacttg 3000 tggttgcata gcgtagtccc aaacagtgca tgcaaccaat agctgcccag cgttgacttg 3000
tctggaagtg ctttcgggtt ctgattctga tcctgtcact gtcactgttg cagtcttctt 3060 tctggaagtg ctttcgggtt ctgattctga tcctgtcact gtcactgttg cagtcttctt 3060
agtctgctac ccagagacac agtgcagttt caagtgttca cccttaggta ttctttctag 3120 agtctgctac ccagagacac agtgcagttt caagtgttca cccttagta ttctttctag 3120
cggcatctta gtggcggcct tggctaagcg gttgtgtcat tcaggtgttg tgtcgtggca 3180 cggcatctta gtggcggcct tggctaagcg gttgtgtcat tcaggtgttg tgtcgtggca 3180
caccaggcat gtctggcggg gttggctccc aacaaatgat gttctgtcaa ggtgttgatt 3240 caccaggcat gtctggcggg gttggctccc aacaaatgat gttctgtcaa ggtgttgatt 3240
ctttacgcta ttctttcggc ctctttaggt catgtctgat tggactgtga cagtgttagt 3300 ctttacgcta ttctttcggc ctctttaggt catgtctgat tggactgtga cagtgttagt 3300
ccagagttat gtacatcatt cgctctgccg gttcacatgc taagctggtg atctaggtct 3360 ccagagttat gtacatcatt cgctctgccg gttcacatgc taagctggtg atctaggtct 3360
agcatcaaag cgttactggt gcgacttggt agacaagaac agcatctcgc tttgtgtcat 3420 agcatcaaag cgttactggt gcgacttggt agacaagaac agcatctcgc tttgtgtcat 3420
ttgtaacatc agaacgcctc cgt 3443 ttgtaacatc agaacgcctc cgt 3443
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CN114990144A (en) * | 2022-05-13 | 2022-09-02 | 华南农业大学 | A nickase-mediated DNA assembly vector guided by a specific nucleotide sequence and its application |
Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2005047480A2 (en) * | 2003-11-12 | 2005-05-26 | E.I. Dupont De Nemours And Company | Delta-15 desaturases suitable for altering levels of polyunsaturated fatty acids in oleaginous plants and yeast |
CN101210234A (en) * | 2006-12-27 | 2008-07-02 | 中国海洋大学 | A kind of marine microalgae Δ5 fatty acid desaturase and its application |
CN101289659A (en) * | 2008-06-19 | 2008-10-22 | 中国海洋大学 | A kind of marine microalgae delta6 fatty acid desaturase and its application |
-
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- 2011-11-25 CN CN2011103791769A patent/CN102492700A/en active Pending
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2005047480A2 (en) * | 2003-11-12 | 2005-05-26 | E.I. Dupont De Nemours And Company | Delta-15 desaturases suitable for altering levels of polyunsaturated fatty acids in oleaginous plants and yeast |
CN101210234A (en) * | 2006-12-27 | 2008-07-02 | 中国海洋大学 | A kind of marine microalgae Δ5 fatty acid desaturase and its application |
CN101289659A (en) * | 2008-06-19 | 2008-10-22 | 中国海洋大学 | A kind of marine microalgae delta6 fatty acid desaturase and its application |
Non-Patent Citations (3)
Title |
---|
《水产学报》 20100930 李春阳 等 缺刻缘绿藻omega3脂肪酸去饱和酶基因的特性及在氮饥饿过程中相对转录量的分析 第1343-1353页 1-9 第34卷, 第9期 * |
DU,D.等: "ACD03846.1", 《GENBANK》, 10 May 2008 (2008-05-10), pages 1 * |
李春阳 等: "缺刻缘绿藻ω3脂肪酸去饱和酶基因的特性及在氮饥饿过程中相对转录量的分析", 《水产学报》, vol. 34, no. 9, 30 September 2010 (2010-09-30), pages 1343 - 1353 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN114990144A (en) * | 2022-05-13 | 2022-09-02 | 华南农业大学 | A nickase-mediated DNA assembly vector guided by a specific nucleotide sequence and its application |
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