CN101665801B - Method for enhancing reverse resistance of microorganisms - Google Patents
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本申请是申请号为200510068113.6、申请日为2005年04月26日、发明创造名称为“一种调控微生物代谢及提高微生物抗逆性的方法”的分案申请。 This application is a divisional application with the application number 200510068113.6, the application date is April 26, 2005, and the invention name is "A Method for Regulating Microbial Metabolism and Improving Microbial Stress Resistance". the
技术领域technical field
本发明涉及生物技术领域中一种调控微生物代谢及提高微生物抗逆性的方法。The invention relates to a method for regulating microbial metabolism and improving microbial stress resistance in the field of biotechnology.
背景技术Background technique
聚羟基脂肪酸酯(Polyhydroxyalkanoate或PHA)是许多种类的细菌都能合成的一种细胞内聚酯,在生物体内主要是作为细胞内碳源和能源的贮藏性物质而存在的(Lemoigne M.Products of dehydration and of polymerization of -hydroxybutyricacid.Bull.Soc.Chem.Biol.,1926,8:770-782)。PHA的结构通式如:Polyhydroxyalkanoate (Polyhydroxyalkanoate or PHA) is a kind of intracellular polyester that can be synthesized by many types of bacteria. It exists mainly as a storage material of intracellular carbon source and energy in organisms (Lemoigne M.Products of dehydration and of polymerization of -hydroxybutyric acid. Bull. Soc. Chem. Biol., 1926, 8: 770-782). The general structural formula of PHA is as follows:
(式I)(Formula I)
其中n可以为1、2、3或4,n=1时表示3-羟基脂肪酸酯;m为聚合度;R为可变的侧链基团,如饱和或不饱和、直链或含侧链及取代基的不同链长的烷基。Where n can be 1, 2, 3 or 4, when n=1, it means 3-hydroxy fatty acid ester; m is the degree of polymerization; R is a variable side chain group, such as saturated or unsaturated, straight chain or side chain Alkyl chains of different chain lengths and substituents.
根据PHA侧链的长短不同,可将PHA分为三种类型:According to the length of the PHA side chain, PHA can be divided into three types:
(1)短链PHA(short-chain-length PHA,scl PHA),如聚羟基丁酸酯(polyhydroxybutyrate,PHB)、羟基丁酸酯与羟基戊酸酯的共聚物[poly(hydroxybutyrate-co-hydroxyvalerate),PHBV],单体含3-5个碳原子。(1) Short-chain PHA (short-chain-length PHA, scl PHA), such as polyhydroxybutyrate (polyhydroxybutyrate, PHB), a copolymer of hydroxybutyrate and hydroxyvalerate [poly(hydroxybutyrate-co-hydroxyvalerate ), PHBV], the monomer contains 3-5 carbon atoms.
(2)中长链PHA(medium-chain-length PHA,mcl PHA),如聚羟基己酸酯(PHHx)、聚羟基辛酸酯(PHO),单体含6个以上碳原子。mcl PHA中可以含有多种功能基团,如双键(Huigberts GNM,Eggink G,Waard P,Huisman GW and Witholt B.Pseudomonas putitaKT2442cultivated on glucose accumulates poly-β-hydroxyalkanoates consistingof saturated and unsaturated momnomers.Appl Envron.Microbiol.,1992,58:536-544)、叁键、卤素(Doi Y and Abe C.Biosynthesis and characterization ofa new bacterial copolyester of 3-hydroxyalkanoates and3-hydroxy-w-chloroalkanoates.Macromolecules,1990,23:2705-3707)、酚(FritzscheK,Lenz RW and Fuller RC.An unusual bacterial polyesters with a phenyl pendantgroup.Macromol Chem,1990,191:1957-1968)和氰(Schulz C,Wolk S,Lenz RW andFuller RC.Growth and polyester production by Pseudomonas oleovorans on branchedoctanoic acid substrates.Macromolecules.1995,27:6358-6362)等。mcl PHA大多是两种以上单体的随机共聚物。(2) Medium-chain-length PHA (mcl PHA), such as polyhydroxyhexanoate (PHHx) and polyhydroxyoctanoate (PHO), the monomer contains more than 6 carbon atoms. Multiple functional groups can be contained in mcl PHA, such as double bonds (Huigberts GNM, Eggink G, Waard P, Huisman GW and Witholt B. Pseudomonas putitaKT2442cultivated on glucose accumulates poly-β-hydroxyalkanoates consisting of saturated and unsaturated. ., 1992, 58: 536-544), triple bond, halogen (Doi Y and Abe C. Biosynthesis and characterization ofa new bacterial copolyester of 3-hydroxyalkanoates and 3-hydroxy-w-chloroalkanoates. Macromolecules, 1990, 23: 2705-3707 ), phenol (FritzscheK, Lenz RW and Fuller RC. An unusual bacterial polyesters with a phenyl pendant group. Macromol Chem, 1990, 191: 1957-1968) and cyanide (Schulz C, Wolk S, Lenz RW and Fuller RC. Growth and tionpolyester produce by Pseudomonas oleovorans on branchedoctanoic acid substrates. Macromolecules.1995, 27:6358-6362) and so on. Most mcl PHAs are random copolymers of two or more monomers.
(3)含短链与中长链单体的PHA,多是两种或两种以上单体的随机共聚物(LageveenRG,Huisman GW,Preusting H,Ketelaar H,Eggink G and Witholt B.Formation of Polyesters by Pseudomonas oleovorans:Effect of Substrates on formation andcomposition of poly-(R)-3-hydroxyalkanoates and poly-(R)-3-hydroxyalkenoates.Appl.En viron.Microbiol,1988,54:2924-2932)。(3) PHAs containing short-chain and medium-long-chain monomers are mostly random copolymers of two or more monomers (LageveenRG, Huisman GW, Preusting H, Ketelaar H, Eggink G and Witholt B. Formation of Polyesters by Pseudomonas oleovorans: Effect of Substrates on formation and composition of poly-(R)-3-hydroxyalkanoates and poly-(R)-3-hydroxyalkenoates. Appl. En viron. Microbiol, 1988, 54: 2924-2932).
PHA对于细菌适应外界环境的变化及生存具有重要的意义。以PHB为例,有些细菌胞内的PHB可以减缓细胞内重要成分-RNA和蛋白质在饥饿条件下的降解,从而可以增加细菌对生存逆境的抵抗能力。另外在某些芽孢杆菌属中,尽管孢子的形成并不必需PHB,但PHB可以作为孢子形成时的能源和碳源从而增加这些菌的生存机会。此外,PHB还可以为某些固氮菌属的包囊形成提供必要的碳源和能源。对Rhizobium sp.ORS 571的固氮与PHB的形成及降解的研究表明,当节结中的氧浓度增加时,PHB可以通过自己的降解保护固氮酶不受损伤(Anderson AJ and Dawes EA.Occurense,Metabolism,Metabolic Role,and Industrial Use of Bacterial Polyhydroxyalkanoates.Microb.Rev.,1990,54:450-472)。PHA is of great significance for bacteria to adapt to changes in the external environment and survive. Taking PHB as an example, PHB in some bacterial cells can slow down the degradation of important intracellular components-RNA and protein under starvation conditions, thereby increasing the resistance of bacteria to survival adversity. In addition, in some Bacillus species, although PHB is not required for spore formation, PHB can be used as an energy and carbon source during spore formation to increase the chances of survival of these bacteria. In addition, PHB can also provide the necessary carbon and energy sources for the cyst formation of certain nitrogen-fixing bacteria. Studies on the nitrogen fixation of Rhizobium sp.ORS 571 and the formation and degradation of PHB have shown that when the oxygen concentration in nodules increases, PHB can protect nitrogenase from damage through its own degradation (Anderson AJ and Dawes EA.Occurense, Metabolism , Metabolic Role, and Industrial Use of Bacterial Polyhydroxyalkanoates. Microb. Rev., 1990, 54: 450-472).
PHA还可以作为环境的标记。在对河湾沉积物中的微生物进行的研究表明,通过比较其中磷脂和PHA的合成比例,可以监测外界因素对沉积物的影响程度。而且许多可合成PHA的细菌都是在活性污泥、及富含碳源有机物的环境中被筛选出来的。在对一些被原油污染严重的地方分离的嗜冷海洋微生物进行的研究表明,其中的大多数微生物都可以在限氮的条件下在胞内积累PHA(Alvarez HM,Pucci OH and Steinbüchel A.Lipid storagecompounds in marine bacteria.Appl.Microbiol.Biotechnol.,1997,47:132-139)。这说明在这些碳源较丰富的环境中大多数细菌都具备将过量的碳源转化为PHA储存起来的能力。PHA can also serve as a marker for the environment. Studies on microorganisms in river bay sediments have shown that by comparing the synthesis ratios of phospholipids and PHA, the degree of influence of external factors on sediments can be monitored. Moreover, many bacteria that can synthesize PHA are screened out in activated sludge and an environment rich in carbon source organic matter. Studies on psychrophilic marine microorganisms isolated from places severely polluted by crude oil have shown that most of them can accumulate PHA in cells under nitrogen-limited conditions (Alvarez HM, Pucci OH and Steinbüchel A. Lipid storage compounds in marine bacteria. Appl. Microbiol. Biotechnol., 1997, 47: 132-139). This shows that most bacteria in these carbon-rich environments have the ability to convert excess carbon sources into PHA for storage.
PHB是细菌胞内的碳源和能源的储备物。但近来发现它也存在于原核生物和真核生物的膜中。在原核生物中,它存在于其原生质膜中;而在真核生物中,则以在线粒体和微体膜中的比例为最多。相比于胞内的高分子量的聚合物,存在于膜上的PHB分子较小,只有100-200个单体。对这种小分子量PHB的研究表明,它可能起着膜上的离子通道的作用。最近,在人的血细胞中也发现较多量的这种小分子PHB。这对于利用PHB来包裹药物进行定向定量释放以及PHA在医疗方面的应用提供了理论上的依据。PHB is a carbon source and energy reserve in bacterial cells. But it has recently been found to be present in the membranes of prokaryotes and eukaryotes as well. In prokaryotes, it exists in the plasma membrane; in eukaryotes, the ratio is the largest in mitochondria and microsomal membranes. Compared with the high-molecular-weight polymers in the cell, the PHB molecules present on the membrane are small, only 100-200 monomers. Studies of this small molecular weight PHB suggest that it may function as an ion channel in the membrane. Recently, a relatively large amount of this small molecule PHB has also been found in human blood cells. This provides a theoretical basis for the use of PHB to encapsulate drugs for directional quantitative release and the application of PHA in medical treatment.
PHA作为一种生态型的生物高分子材料,不仅可以在塑料工业中得以推广和应用,成为新型的生物可降解塑料,而且由于它的一些特殊性质,如生物相容性、光学活性、压电性、气体相隔性等和其它许多尚未发现的性质,从而有可能在某些高附加值领域得以应用。对PHA的研究已经成为一个基础理论与实践应用结合得非常紧密的应用领域。As an ecological biopolymer material, PHA can not only be promoted and applied in the plastics industry, and become a new type of biodegradable plastic, but also because of its special properties, such as biocompatibility, optical activity, piezoelectric properties, gas barrier properties, etc., and many other properties that have not yet been discovered, which may be applied in some high value-added fields. The research on PHA has become an application field in which basic theory and practical application are closely combined.
不同类型PHA在细菌内的合成途迳是不同的,目前已知的合成途径主要有三条(Anderson AJ and Dawes EA.Occurense,Metabolism,Metabolic Role,and IndustrialUse of Bacterial Polyhydroxyalkanoates.Microb.Rev.,1990,54:450-472;Lee SY.Bacterial Polyhydroxyalkanoates.Biotech.Bioeng.1996,49:1-14):The synthesis pathways of different types of PHA in bacteria are different. Currently, there are three known synthesis pathways (Anderson AJ and Dawes EA. Occurense, Metabolism, Metabolic Role, and Industrial Use of Bacterial Polyhydroxyalkanoates. Microb. Rev., 1990, 54: 450-472; Lee SY. Bacterial Polyhydroxyalkanoates. Biotech. Bioeng. 1996, 49: 1-14):
1.以Wautersia eu tropha(以前叫Ralstonia eutropha,也叫Alcaligeneseutrophus)为代表的由乙酰辅酶A直接合成PHB途径:它的PHB合成酶系统由pha合成 操纵子phbCAB(SEQ ID NO:1)基因编码,包含三种酶:β-酮基硫解酶(β-ketothiolase)、NADPH依赖的乙酰乙酰辅酶A还原酶(acetoacyl-CoA reductase)和PHB合成酶(PHBsynthase);上述三种酶分别由phbA、phbB和phbC基因编码,且位于同一个操纵子上。细胞内的代谢中产物乙酰辅酶A在β-酮基硫解酶(β-ketothiolase,PhaA)的催化作用下形成乙酰乙酰辅酶A,然后在NADPH依赖的还原酶(PhaB)的作用下还原为(R)-羟基丁酰辅酶A,(R)-羟基丁酰辅酶A在PHB合成酶的作用下聚合成PHB。这个过程需要消耗NADPH,产生NADP。1. Take Wautersia eutropha (formerly called Ralstonia eutropha, also called Alcaligeneseutrophus) as a representative to directly synthesize PHB pathway by acetyl-CoA: its PHB synthetase system is encoded by pha synthesis operon phbCAB (SEQ ID NO: 1) gene, Contains three enzymes: β-ketothiolase (β-ketothiolase), NADPH-dependent acetoacetyl-CoA reductase (acetoacyl-CoA reductase) and PHB synthase (PHBsynthase); It is encoded by the phbC gene and is located on the same operon. The intracellular metabolic product acetyl-CoA is catalyzed by β-ketothiolase (PhaA) to form acetoacetyl-CoA, and then reduced to ( R)-hydroxybutyryl-CoA, (R)-hydroxybutyryl-CoA is polymerized into PHB under the action of PHB synthetase. This process needs to consume NADPH and produce NADP.
2.以Pseudomonas aeruginosa为代表的脂肪酸从头合成途径:从这条途径合成PHA需要两个酶的催化:phaG编码的3-羟酰基-酰基转移蛋白辅酶A转运酶(3-Hydroxyacyl-ACP-CoA transferase)和phaC编码的PHA合酶。脂肪酸从头合成途径的中间产物3-羟酰基-酰基转移蛋白由3-羟酰基-酰基转移蛋白辅酶A转运酶(PhaG)催化形成PHA的前体3-羟基酯酰辅酶A,再由PHA合酶聚合成PHA。同样的途径有恶臭假单胞菌(Pseudomonas putita)的合成途径,恶臭假单胞菌(Pseudomonas putita)的PhaG的编码基因的Genbank检索号是AF052507。2. Fatty acid de novo synthesis pathway represented by Pseudomonas aeruginosa: the synthesis of PHA from this pathway requires the catalysis of two enzymes: 3-hydroxyacyl-acyl transfer protein coenzyme A transferase (3-Hydroxyacyl-ACP-CoA transferase) encoded by phaG ) and PHA synthase encoded by phaC. The intermediate product 3-hydroxyacyl-acyl transfer protein in the fatty acid de novo synthesis pathway is catalyzed by 3-hydroxyacyl-acyl transfer protein coenzyme A transferase (PhaG) to form the precursor 3-hydroxyacyl-CoA of PHA, which is then catalyzed by PHA synthase polymerized into PHA. The same pathway has the synthetic pathway of Pseudomonas putita, and the Genbank accession number of the gene encoding PhaG of Pseudomonas putita is AF052507.
3.以Pseudomonas oleovorans为代表的β-氧化途径:从这条途径合成PHA需要两个酶的作用:phaJ编码的(R)-烯酰基-水合酶((R)-enoyl-CoA hydratase)和phaC编码的PHA合酶。脂肪酸β-氧化的中间产物烯酰基-酰基转移蛋白由(R)-烯酰基-水合酶(PhaJ)催化形成PHA的前体3-羟基酯酰辅酶A,再由PHA聚合酶聚合成PHA。同样的途径有嗜水气单胞菌(Aeromonas hydrophila)的合成途径,嗜水气单胞菌(Aeromonas hydrophila)的PHA合成酶操纵子(PHA synthase operon)编码基因的Genbank检索号是AY093685,包括PhaJ和PhaC的编码基因。3. The β-oxidation pathway represented by Pseudomonas oleovorans: the synthesis of PHA from this pathway requires the action of two enzymes: (R)-enoyl-hydratase ((R)-enoyl-CoA hydratase) encoded by phaJ and phaC Encoded PHA synthase. The intermediate product of fatty acid β-oxidation, enoyl-acyl transfer protein, is catalyzed by (R)-enoyl-hydratase (PhaJ) to form the precursor of PHA, 3-hydroxyacyl-CoA, which is then polymerized into PHA by PHA polymerase. The same pathway has the synthetic pathway of Aeromonas hydrophila (Aeromonas hydrophila), and the Genbank accession number of the PHA synthase operon (PHA synthase operon) encoding gene of Aeromonas hydrophila is AY093685, including PhaJ and the gene encoding PhaC.
用13C-NMR对Pseudomonas putida的脂肪酸合成的研究表明脂肪酸的从头合成和β-氧化与PHA合成是独立进行的(Huijberts GN,De Rijk TC,De Waard P and Eggink G..13 C nuclear magnetic resonance studies of Pseudomonas putidas fatty acidsmetabolic routes involved iThe study of fatty acid synthesis in Pseudomonas putida by 13 C-NMR showed that de novo fatty acid synthesis and β-oxidation are independent of PHA synthesis (Huijberts GN, De Rijk TC, De Waard P and Eggink G..13 C nuclear magnetic resonance studies of Pseudomonas putidas fatty acids metabolic routes involved i
在PHA的代谢途径中,既有能量的代谢(NAD/NADH,NADP/NADPH等),也有物质的代谢(乙酰辅酶A,脂肪酸等),因此PHA的代谢过程,实际上也是一个细胞内能量和物质的改变过程。由于PHA可以广泛的存在于各种细胞中,这也为将PHA合成机制作为调 节手段在各种不同的微生物中调节其能量和物质水平,进而影响代谢产物提供了基础。In the metabolic pathway of PHA, there are both energy metabolism (NAD/NADH, NADP/NADPH, etc.) The process of changing matter. Since PHA can widely exist in various cells, this also provides a basis for using the PHA synthesis mechanism as a regulatory means to regulate its energy and material levels in various microorganisms, thereby affecting metabolites.
发明内容Contents of the invention
本发明的一个目的是提供一种调控微生物代谢的方法。One object of the present invention is to provide a method for regulating the metabolism of microorganisms.
本发明所提供的调控微生物代谢的方法,是在微生物中合成聚羟基脂肪酸酯;所述聚羟基脂肪酸酯的合成是通过在所述微生物中引入聚羟基脂肪酸酯合成途径的相关基因而实现的。The method for regulating microbial metabolism provided by the present invention is to synthesize polyhydroxyalkanoate in microorganisms; the synthesis of said polyhydroxyalkanoate is achieved by introducing related genes of polyhydroxyalkanoate synthesis pathway in said microorganism Achieved.
所述代谢包括能量和物质代谢。The metabolism includes energy and substance metabolism.
所述聚羟基脂肪酸酯合成途径的相关基因选自下述1),2)和3)中的任意一种:The relevant genes of the polyhydroxyalkanoate synthesis pathway are selected from any one of the following 1), 2) and 3):
1)phbCAB基因,2)phaG和phaC基因,3)phaJ和phaC基因。1) phbCAB gene, 2) phaG and phaC genes, 3) phaJ and phaC genes.
所述phbCAB基因优选为具有序列表中SEQ ID NO:1的DNA序列;所述PhaG基因优选为AF052507,所述phaC基因优选为来自于AY093685,所述phaJ基因优选为来自于AY093685。The phbCAB gene preferably has the DNA sequence of SEQ ID NO: 1 in the sequence listing; the PhaG gene is preferably AF052507, the phaC gene is preferably from AY093685, and the phaJ gene is preferably from AY093685.
PHA合成途径的相关基因可以通过本领域的常规手段导入宿主微生物中,例如,可以利用表达载体如质粒、粘粒、噬菌体等,通过转化、转导、接合等手段导入宿主微生物中;也可以利用原生质体融合等手段来实现。The relevant genes of the PHA synthesis pathway can be introduced into host microorganisms by conventional means in the art, for example, expression vectors such as plasmids, cosmids, phages, etc. can be utilized to be introduced into host microorganisms by means of transformation, transduction, conjugation, etc.; Protoplast fusion and other means to achieve.
所述调控微生物代谢为调控微生物对发酵产物的生产能力。The regulation of microbial metabolism is the regulation of the ability of microorganisms to produce fermentation products.
所述微生物为细菌,古细菌和真菌;所述发酵产物包括有机酸,醇类,抗生素,氨基酸和维生素。The microorganisms are bacteria, archaea and fungi; the fermentation products include organic acids, alcohols, antibiotics, amino acids and vitamins.
其中,所述微生物可为兽疫链球菌(Streptococcus zooepidemicus),优选为兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920,所述发酵产物为乳酸和透明质酸;Wherein, the microorganism can be Streptococcus zooepidemicus (Streptococcus zooepidemicus), preferably Streptococcus zooepidemicus (Streptococcus zooepidemicus) ATCC 39920, and the fermentation product is lactic acid and hyaluronic acid;
所述微生物可为光滑球拟酵母(Torulopsis glabrata),优选为光滑球拟酵母(Torulopsis glabrata)CCTCCM202019,所述发酵产物为丙酮酸;The microorganism can be Torulopsis glabrata, preferably Torulopsis glabrata CCTCCM202019, and the fermentation product is pyruvate;
所述微生物可为酿酒酵母(Saccharomyces cerevisiae),优选为酿酒酵母(Saccharomyces cerevisiae)IFFI 01338,所述发酵产物为麦角固醇;The microorganism can be Saccharomyces cerevisiae, preferably Saccharomyces cerevisiae IFFI 01338, and the fermentation product is ergosterol;
所述微生物可为枯草芽孢杆菌(Bacillus subtilis),优选为枯草芽孢杆菌(Bacillus subtilis)ATCC 19162,所述发酵产物为肌苷;The microorganism can be Bacillus subtilis (Bacillus subtilis), preferably Bacillus subtilis (Bacillus subtilis) ATCC 19162, and the fermentation product is inosine;
所述微生物可为嗜碱芽孢杆菌(Bacillus alcalophilus),优选为嗜碱芽孢杆菌(Bacillus alcalophilus)Ya-B,所述发酵产物为弹性蛋白酶;The microorganism can be Bacillus alcalophilus, preferably Bacillus alcalophilus Ya-B, and the fermentation product is elastase;
所述微生物可为红酵母(Rhodotorula glutinis),优选为红酵母(Rhodotorulaglutinis)NCIM 3353,所述发酵产物为类胡萝卜素;The microorganism can be Rhodotorula glutinis, preferably Rhodotorula glutinis NCIM 3353, and the fermentation product is carotenoid;
所述微生物可为谷氨酸棒杆菌(Corynebacterium glutamicum),优选为谷氨酸棒杆菌(Corynebacterium glutamicum)ATCC 13032,所述发酵产物为谷氨酰胺;The microorganism can be Corynebacterium glutamicum (Corynebacterium glutamicum), preferably Corynebacterium glutamicum (Corynebacterium glutamicum) ATCC 13032, and the fermentation product is glutamine;
所述微生物可为乳酸发酵短杆菌(Brevibacterium lactofermentum),优选为乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269,所述发酵产物为赖氨 酸;The microorganism may be Brevibacterium lactofermentum, preferably Brevibacterium lactofermentum ATCC 31269, and the fermentation product is lysine;
所述微生物可为大肠杆菌(Escherichia.coli),优选为大肠杆菌(Escherichia.coli)ATCC 31882,所述发酵产物为苯丙氨酸;The microorganism can be Escherichia coli (Escherichia.coli), preferably Escherichia coli (Escherichia.coli) ATCC 31882, and the fermentation product is phenylalanine;
所述微生物可为荧光假单胞菌(Pseudomonas fluorescens),优选为荧光假单胞菌(Pseudomonas fluorescens)AS 1.55,所述发酵产物为葡萄糖酸;The microorganism can be Pseudomonas fluorescens (Pseudomonas fluorescens), preferably Pseudomonas fluorescens AS 1.55, and the fermentation product is gluconic acid;
所述微生物可为枯草芽孢杆菌(Bacillus subtilis),优选为枯草芽孢杆菌(Bacillus subtilis)ATCC 21556,所述发酵产物为α-淀粉酶;The microorganism can be Bacillus subtilis (Bacillus subtilis), preferably Bacillus subtilis ATCC 21556, and the fermentation product is α-amylase;
所述微生物可为酿酒酵母(Saccharomyces cerevisiae),优选为酿酒酵母(Saccharomyces cerevisiae)ACCC 2063,所述发酵产物为乙醇;The microorganism can be Saccharomyces cerevisiae, preferably Saccharomyces cerevisiae ACCC 2063, and the fermentation product is ethanol;
所述微生物可为克鲁斯假丝酵母(Candida krusei),优选为克鲁斯假丝酵母(Candida krusei)ACCC 2196,所述发酵产物为甘油;The microorganism can be Candida krusei (Candida krusei), preferably Candida krusei (Candida krusei) ACCC 2196, and the fermentation product is glycerol;
所述微生物可为热带假丝酵母(Candida tropicalis),优选为热带假丝酵母(Candida tropicalis)UH22248,所述发酵产物为十二碳二元酸;The microorganism can be Candida tropicalis (Candida tropicalis), preferably Candida tropicalis (Candida tropicalis) UH22248, and the fermentation product is dodecanedioic acid;
所述微生物可为热带假丝酵母(Candida tropicalis),优选为热带假丝酵母(Candida tropicalis)T25-14,所述发酵产物为十五碳二元酸;The microorganism may be Candida tropicalis, preferably Candida tropicalis T 25-14 , and the fermentation product is pentadecanedioic acid;
所述微生物可为枯草芽孢杆菌(Bacillus subtilis),优选为枯草芽孢杆菌(Bacillus subtilis)ATCC 19220,所述发酵产物为鸟苷;The microorganism can be Bacillus subtilis (Bacillus subtilis), preferably Bacillus subtilis ATCC 19220, and the fermentation product is guanosine;
所述微生物可为酿酒酵母(Saccharomyces cerevisiae),优选为酿酒酵母(Saccharomyces cerevisiae)KY6186,所述发酵产物为谷胱甘肽;The microorganism can be Saccharomyces cerevisiae, preferably Saccharomyces cerevisiae KY6186, and the fermentation product is glutathione;
所述微生物可为球拟酵母(ToruLopsis sp),优选为球拟酵母(ToruLopsis sp)B845,所述发酵产物为赤藓糖醇;The microorganism can be ToruLopsis sp, preferably ToruLopsis sp B845, and the fermentation product is erythritol;
所述微生物可为短小芽孢杆菌(Bacilluspumilus),优选为短小芽孢杆菌(Bacilluspumilus)ATCC 31095,所述发酵产物为D-核糖;The microorganism can be bacillus pumilus (Bacillus pumilus), preferably bacillus pumilus (Bacillus pumilus) ATCC 31095, and the fermentation product is D-ribose;
所述微生物可为丁酸梭芽孢杆菌(Clostridium butyricum),优选为丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260,所述发酵产物为1,3-丙二醇;The microorganism can be Clostridium butyricum (Clostridium butyricum), preferably Clostridium butyricum (Clostridium butyricum) ATCC 8260, and the fermentation product is 1,3-propanediol;
所述微生物可为荧光假单胞菌(Pseudomonas fluorescens),优选为荧光假单胞菌(Pseudomonas fluorescens)AS 1.55,所述发酵产物为葡萄糖酸;The microorganism can be Pseudomonas fluorescens (Pseudomonas fluorescens), preferably Pseudomonas fluorescens AS 1.55, and the fermentation product is gluconic acid;
所述微生物可为枯草芽孢杆菌(Bacillus subtilis),优选为枯草芽孢杆菌(Bacillus subtilis)ATCC 19162,所述发酵产物为肌苷;The microorganism can be Bacillus subtilis (Bacillus subtilis), preferably Bacillus subtilis (Bacillus subtilis) ATCC 19162, and the fermentation product is inosine;
所述微生物可为运动发酵单胞菌(Zymomonas mobilis),优选为运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286,所述发酵产物为乙醇。The microorganism can be Zymomonas mobilis (Zymomonas mobilis), preferably Zymomonas mobilis NRRL B-4286, and the fermentation product is ethanol.
本发明的另一个目的是提供一种提高微生物抗逆性的方法。Another object of the present invention is to provide a method for improving the stress resistance of microorganisms.
本发明所提供的提高微生物抗逆性的方法,是在微生物中合成聚羟基脂肪酸酯;所述聚羟基脂肪酸酯的合成是通过在所述微生物中引入聚羟基脂肪酸酯合成途径的相关基 因而实现的。The method for improving the stress resistance of microorganisms provided by the present invention is to synthesize polyhydroxyalkanoate in microorganisms; the synthesis of said polyhydroxyalkanoate is by introducing the relevant pathway of polyhydroxyalkanoate synthesis in said microorganisms genetically accomplished.
所述聚羟基脂肪酸酯合成途径的相关基因选自下述1),2)和3)中的任意一种:1)phbCAB基因,2)phaG和phaC基因,3)phaJ和phaC基因。The relevant genes of the polyhydroxyalkanoate synthesis pathway are selected from any one of the following 1), 2) and 3): 1) phbCAB gene, 2) phaG and phaC genes, 3) phaJ and phaC genes.
所述phbCAB基因优选为具有序列表中SEQ ID NO:1的DNA序列;所述PhaG基因优选为AF052507,所述phaC基因优选为来自于AY093685,所述phaJ基因优选为来自于AY093685。The phbCAB gene preferably has the DNA sequence of SEQ ID NO: 1 in the sequence listing; the PhaG gene is preferably AF052507, the phaC gene is preferably from AY093685, and the phaJ gene is preferably from AY093685.
其中,所述方法中,所述微生物可为酿酒酵母(Saccharomyces cerevisiae),优选为酿酒酵母(Saccharomyces cerevisiae)ACCC 2063,所述逆境胁迫为冷胁迫或热胁迫;Wherein, in the method, the microorganism can be Saccharomyces cerevisiae, preferably Saccharomyces cerevisiae ACCC 2063, and the adversity stress is cold stress or heat stress;
所述微生物可为大肠杆菌(Escherichia coli),优选为大肠杆菌(Escherichiacoli)JM109,所述逆境胁迫为重金属离子胁迫;所述重金属离子可为Hg2+;The microorganism can be Escherichia coli (Escherichia coli), preferably Escherichia coli (Escherichia coli) JM109, and the adversity stress is heavy metal ion stress; the heavy metal ion can be Hg 2+ ;
所述微生物为运动发酵单胞菌(Zymomonas mobilis),优选为运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286,所述逆境胁迫为低pH胁迫或高渗透压胁迫;The microorganism is Zymomonas mobilis (Zymomonas mobilis), preferably Zymomonas mobilis NRRL B-4286, and the adversity stress is low pH stress or high osmotic pressure stress;
所述微生物可为嗜酸乳杆菌(Lactobacillus acidophilus),优选为嗜酸乳杆菌(Lactobacillus acidophilus)ATCC 53671,所述逆境胁迫为低pH胁迫;The microorganism can be Lactobacillus acidophilus (Lactobacillus acidophilus), preferably Lactobacillus acidophilus (Lactobacillus acidophilus) ATCC 53671, and the adversity stress is low pH stress;
所述微生物可为芽孢杆菌,优选为苏云金芽孢杆菌(Bacillus thuringiensis),尤其优选为苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068;The microorganism can be bacillus, preferably Bacillus thuringiensis (Bacillus thuringiensis), especially preferably Bacillus thuringiensis (Bacillus thuringiensis) ACCC 10068;
所述微生物可为芽孢杆菌,优选为芽孢杆菌(Bacillus sp)L-23;所述逆境胁迫为原油胁迫。The microorganism can be a bacillus, preferably a bacillus (Bacillus sp) L-23; the adversity stress is crude oil stress.
本发明通过引入PHA合成基因,使微生物本身的代谢得到调控,提高了对逆境胁迫的抗性。In the invention, the metabolism of the microorganism itself is regulated by introducing the PHA synthesis gene, and the resistance to adversity stress is improved.
所述PHA合成机制包括以Wautersia eutropha,Rhodospirillum rubrum为代表的由乙酰辅酶A直接合成PHB途径;以Pseudomonas aeruginasa为代表的脂肪酸从头合成途径,以Pseudomonas oleovorans为代表的脂肪酸β-氧化途径等。The PHA synthesis mechanism includes the PHB pathway directly synthesized by acetyl-CoA represented by Wautersia eutropha and Rhodospirillum rubrum; the de novo synthesis pathway of fatty acid represented by Pseudomonas aeruginasa, the fatty acid β-oxidation pathway represented by Pseudomonas oleovorans, etc.
在本发明的调控微生物代谢及提高微生物抗逆性的方法中,可将PHA合成的相关基因克隆到针对于目的菌的质粒载体上,将构建的质粒导入到目的菌中获得重组菌,发酵重组菌获得所需的产物或提高抗逆性。PHA合成的相关基因可以在质粒上或染色体上。In the method for regulating microbial metabolism and improving microbial stress resistance of the present invention, the related gene of PHA synthesis can be cloned into the plasmid vector for the target bacteria, and the constructed plasmid can be introduced into the target bacteria to obtain recombinant bacteria, and fermented and recombined Bacteria to obtain desired products or improve stress resistance. The genes related to PHA synthesis can be on the plasmid or on the chromosome.
为提高转化效率,将重组质粒表达载体导入目的菌中的方法优选为电转化法,但也可以采用其它生物工程领域中常用的方法,包括热激法、原生质体转化法和接合转化法。In order to improve the transformation efficiency, the method of introducing the recombinant plasmid expression vector into the target bacteria is preferably the electroporation method, but other commonly used methods in the field of bioengineering can also be used, including heat shock method, protoplast transformation method and conjugation transformation method.
本发明通过在微生物重组生产菌中引入PHA合成途径,调节了细胞内的NAD(P)/NAD(P)H代谢以及乙酰辅酶A,丙酮酸等中间代谢产物的流向,为所需的发酵产物提供可调节的合成环境,同时PHA的积累能提高重组生产菌对恶劣环境的耐受力,特别是产物的反馈抑制,也有利于提高发酵产量的提高。The present invention adjusts the intracellular NAD(P)/NAD(P)H metabolism and the flow direction of intermediate metabolites such as acetyl-CoA and pyruvate by introducing the PHA synthesis pathway into the microbial recombinant production bacteria to obtain the desired fermentation product An adjustable synthetic environment is provided, and the accumulation of PHA can improve the tolerance of the recombinant production bacteria to harsh environments, especially the feedback inhibition of the product, which is also conducive to improving the fermentation yield.
本发明利用PHA合成路径调节微生物代谢,提高微生物发酵产物的生产效率,进一步 提高微生物抗逆性。本发明提供的方法是构建含有PHA合成相关基因的质粒,在导入相应菌株中进行表达。所述的菌株可以为各种微生物生产菌。将本发明的方法应用到各种微生物生产菌中,可以有效的影响生产菌的代谢途径,增加菌的抗逆性,提高包括透明质酸、丙酮酸、麦角固醇、啤酒、肌苷、弹性蛋白酶、类胡萝卜素、谷氨酰胺、赖氨酸、苯丙氨酸、葡萄糖酸、淀粉酶、酒精、甘油、十二碳二元酸、十五碳二元酸、苏云金杆菌粉剂、鸟苷、谷胱甘肽、赤藓糖醇、D-核糖,1,3-丙二醇等生物工程产品的生产效率。The present invention uses the PHA synthesis pathway to regulate microbial metabolism, improve the production efficiency of microbial fermentation products, and further improve the stress resistance of microorganisms. The method provided by the invention is to construct a plasmid containing a gene related to PHA synthesis, and introduce it into a corresponding bacterial strain for expression. The bacterial strains can be various microbial producers. Applying the method of the present invention to various microbial production bacteria can effectively affect the metabolic pathways of the production bacteria, increase the stress resistance of the bacteria, and improve Protease, Carotenoids, Glutamine, Lysine, Phenylalanine, Gluconic Acid, Amylase, Alcohol, Glycerin, Dodecanedioic Acid, Pentadecanedioic Acid, Bacillus thuringiensis Powder, Guanosine, Production efficiency of glutathione, erythritol, D-ribose, 1,3-propanediol and other bioengineered products.
在不偏离本发明的精神和范围的情况下,本领域的普通技术人员可以在形式和细节上对其做出各种改变和改进,这些均在本发明的保护范围之内,如利用根据密码子简并原则或碱基互补原则所获得的与本发明的聚羟基脂肪酸酯合成途径的相关基因功能基本相同的核酸分子,对于聚羟基脂肪酸酯合成途径的相关酶,在其不起主要作用的位点进行氨基酸插入和/或缺失和/或替换所得到的功能基本相同的蛋白质或多肽的编码基因,来实现本发明的目的,均被认为落入了本发明的保护范围。Without departing from the spirit and scope of the present invention, those skilled in the art can make various changes and improvements in form and details, and these are all within the protection scope of the present invention, such as using The nucleic acid molecules obtained by the principle of sub-degeneracy or the principle of base complementarity are basically the same as the related gene functions of the polyhydroxyalkanoate synthesis pathway of the present invention. Amino acid insertions and/or deletions and/or substitutions at the sites of action can result in genes encoding proteins or polypeptides with substantially the same function to achieve the purpose of the present invention and are considered to fall within the protection scope of the present invention.
具体实施方式Detailed ways
下述实施例中的实验方法,如无特别说明,均为常规方法。The experimental methods in the following examples are conventional methods unless otherwise specified.
下述实施例中的百分含量如无特别说明,均为质量百分含量。The percentages in the following examples are all mass percentages unless otherwise specified.
本发明中所使用的术语“PHA”是指由微生物合成的聚羟基脂肪酸酯,其结构通式如式(I)所示,包括的PHA分子式例如聚羟基丁酸(PHB)、3-羟基丁酸和3-羟基戊酸的共聚物PHBV、3-羟基丁酸和3-羟基己酸的共聚物PHBHHx以及中长链单体如3-羟基己酸HHx到3-羟基十二酸3-HDD的单聚物或共聚物,。The term "PHA" used in the present invention refers to polyhydroxyalkanoate synthesized by microorganisms, its structural general formula is shown in formula (I), and the PHA molecular formula included is such as polyhydroxybutyric acid (PHB), 3-hydroxy Copolymers of butyric acid and 3-hydroxyvaleric acid PHBV, copolymers of 3-hydroxybutyric acid and 3-hydroxyhexanoic acid PHBHHx and medium- and long-chain monomers such as 3-hydroxyhexanoic acid HHx to 3-hydroxydodecanoic acid 3- Monopolymer or copolymer of HDD,.
本发明中所使用的术语“PHA合成途径的相关基因”是指,在PHA合成途径中,参与了PHA整个合成过程的各种相关合成酶和调控蛋白所对应的基因;例如PHA合酶基因phaC,3-羟酰基-酰基转移蛋白辅酶A转运酶基因phaG,(R)-烯酰基-水合酶基因phaJ基因等。The term "related genes of the PHA synthesis pathway" used in the present invention refers to, in the PHA synthesis pathway, the genes corresponding to various related synthetases and regulatory proteins that have participated in the entire synthesis process of PHA; for example, the PHA synthase gene phaC , 3-hydroxyacyl-acyl transfer protein coenzyme A transferase gene phaG, (R)-enoyl-hydratase gene phaJ gene, etc.
本发明中所使用的术语“抗逆性”是指微生物在偏离其最佳生长条件下的环境中的生存能力,比如较高或较低的温度,较高或较低的pH,较高或较低的渗透压,较高的反馈抑制,有毒物质的存在等。The term "stress resistance" used in the present invention refers to the ability of microorganisms to survive in an environment that deviates from its optimal growth conditions, such as higher or lower temperature, higher or lower pH, higher or lower Lower osmotic pressure, higher feedback inhibition, presence of toxic substances, etc.
本发明中所使用的术语“微生物”包括细菌、古细菌、真菌(例如酵母)等。The term "microorganism" used in the present invention includes bacteria, archaea, fungi (such as yeast) and the like.
本发明中所使用的术语“发酵产物”是指一切通过微生物发酵或转化而得到的产品,比如有机酸、酒精、其他醇类、抗生素、氨基酸、维生素等。The term "fermentation product" used in the present invention refers to all products obtained through microbial fermentation or transformation, such as organic acids, alcohols, other alcohols, antibiotics, amino acids, vitamins, etc.
实施例1、在兽疫链球菌中表达Wautersia eutropha的phbCAB基因影响乳酸及透明质酸产量Embodiment 1, expressing the phbCAB gene of Wautersia eutropha in Streptococcus zooepidemicus affects the production of lactic acid and hyaluronic acid
菌种:兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920Bacteria: Streptococcus zooepidemicus ATCC 39920
1)在标准的聚合酶链式反应条件下,以pBHR68质粒(Spiekermann P,Rehm BHA,Kalscheuer R,Baumeister D,Steinbüchel A.A sensitive,viable- colony stainingmethod using Nile red for direct screening of bacteria that accumulatepolyhydroxyalka1) Under standard polymerase chain reaction conditions, pBHR68 plasmid (Spiekermann P, Rehm BHA, Kalscheuer R, Baumeister D, Steinbüchel A.A sensitive, viable- colony staining method using Nile red for direct screening of bacteria that accumulatepolyhydroxyalka
2)制备兽疫链球菌的感受态细胞,并将质粒pEUHBNOI用电转化方法转入兽疫链球菌中。2) Prepare competent cells of Streptococcus zooepidemicus, and transfer the plasmid pEUHBNOI into Streptococcus zooepidemicus by electroporation.
感受态细胞的制备:Preparation of Competent Cells:
将兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920在含有THYB(Todd-Hewitt broth)(从OXOID购买)36.4g/L和酵母浸出物0.5%的培养基中培养12h;然后将其接种到50mL新鲜的THYB培养基中,接种后D530不超过0.05,培养到OD530=0.25即可;并在培养结束前半小时加入透明质酸酶0.4mg/mL;Cultivate Streptococcus zooepidemicus (Streptococcus zooepidemicus) ATCC 39920 in a medium containing THYB (Todd-Hewitt broth) (purchased from OXOID) 36.4g/L and yeast extract 0.5% for 12h; then inoculate it into 50mL fresh THYB In the medium, the D530 after inoculation should not exceed 0.05, and it is enough to cultivate until OD530=0.25; and add hyaluronidase 0.4 mg/mL half an hour before the end of the culture;
4℃,8000g,离心10分钟,弃上清,用20mL 0.5mmol/L蔗糖溶液重悬细胞;4°C, 8000g, centrifuge for 10 minutes, discard the supernatant, and resuspend the cells with 20mL 0.5mmol/L sucrose solution;
4℃,8000g,离心10分钟,弃上清,用1mL 0.5mmol/L蔗糖溶液重悬细胞,再离心,弃上清;将细胞重悬在250μL含有10%甘油的0.5mmol/L蔗糖溶液中,按使用体积分装到Eppendorf管中;迅速置于-80℃保存。4°C, 8000g, centrifuge for 10 minutes, discard the supernatant, resuspend the cells with 1mL 0.5mmol/L sucrose solution, centrifuge again, discard the supernatant; resuspend the cells in 250μL 0.5mmol/L sucrose solution containing 10% glycerol , according to the volume used, packed into Eppendorf tubes; quickly stored at -80 ℃.
兽疫链球菌的电转化Electroporation of Streptococcus zooepidemicus
在200μL感受态细胞中加入500-5000ng质粒pEUHBNOI,冰浴10分钟;将混合体系转移到2mm电激杯中电激,电压设为2.5kv;Add 500-5000ng of plasmid pEUHBNOI to 200μL of competent cells, and ice-bath for 10 minutes; transfer the mixed system to a 2mm electric shock cup for electric shock, and set the voltage to 2.5kv;
用1mL冰冷的THYB将混合体系转移到10mLTHYB中,冰浴30-60分钟;然后37℃静置培养1小时;接着在14℃,6000g,离心10分钟,菌体用1mL THYB重悬并涂于抗性平板上进行转化子的筛选,得到重组兽疫链球菌(含有pEUHBNOI的兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920)。Use 1mL of ice-cold THYB to transfer the mixed system to 10mL of THYB, ice-bath for 30-60 minutes; then culture at 37°C for 1 hour; then at 14°C, 6000g, centrifuge for 10 minutes, resuspend the bacteria in 1mL of THYB and spread on Transformants were screened on the resistance plate to obtain recombinant Streptococcus zooepidemicus (Streptococcus zooepidemicus ATCC 39920 containing pEUHBNOI).
3)重组兽疫链球菌的发酵3) Fermentation of recombinant Streptococcus zooepidemicus
种子培养基成分为蔗糖:20g/L,酵母粉:10g/L,牛肉膏:10g/L,MgSO4·7H2O:2g/L,MnSO4·4H2O:0.1g/L,KH2PO4:2g/L,微量元素液:1mL/l,种子缓冲液:40mL/l。 发酵培养基成分为酵母粉:20g/L,Na2HPO4·12H2O:6.2g/L,MgSO4·7H2O:2g/L,K2SO41.3g/L,FeSO4·7H2O:5mg/L,微量元素液:2.5mL/l,蔗糖:70g/L。其中微量元素液含CaCl2:2g/L,MnSO4·4H2O:24mg/L,ZnCl2:46mg/L,CuSO4·5H2O:19mg/L;种子缓冲液含Na2HPO4·12H2O:36.76g/L,NaH2PO4·12H2O:15.98g/L,NaHCO3:12.5g/L。The composition of the seed medium is sucrose: 20g/L, yeast powder: 10g/L, beef extract: 10g/L, MgSO 4 7H 2 O: 2g/L, MnSO 4 4H 2 O: 0.1g/L, KH 2 PO 4 : 2g/L, trace element solution: 1mL/l, seed buffer: 40mL/l. The components of the fermentation medium are yeast powder: 20g/L, Na 2 HPO 4 12H 2 O: 6.2g/L, MgSO 4 7H 2 O: 2g/L, K 2 SO 4 1.3g/L, FeSO 4 7H 2 O: 5mg/L, trace element solution: 2.5mL/l, sucrose: 70g/L. The trace element solution contains CaCl 2 : 2g/L, MnSO 4 4H 2 O: 24mg/L, ZnCl 2 : 46mg/L, CuSO 4 5H 2 O: 19mg/L; the seed buffer contains Na 2 HPO 4 . 12H 2 O: 36.76 g/L, NaH 2 PO 4 ·12H 2 O: 15.98 g/L, NaHCO 3 : 12.5 g/L.
用接种环分别挑取平板上的兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920和重组菌菌种,分别接入装有150mL种子培养基的500mL三角瓶中,于200rpm的摇床上培养14-16小时,培养温度设为37℃;然后按10%(体积比)的接种量将种子接入发酵罐(7.5升发酵罐(NBS Bioflo 3000,NJ,USA)中装液量3升)中。发酵罐控制温度37℃,pH值7.0,通气量5L/min。初始搅拌速度200rpm,当溶氧降到0时升高转速到500rpm,溶氧再次降到0时转速调为650rpm,并维持到发酵结束,兽疫链球菌(Streptococcus zooepidemicus)ATCC 39920发酵14小时,重组菌发酵16小时。分别测定发酵培养基中的透明质酸和乳酸的含量。结果表明兽疫链球菌(Streptococcuszooepidemicus)ATCC 39920发酵14小时的透明质酸(Hyaluronic acid,HA)和乳酸产量分别为5.4g/L和65g/L。重组菌发酵14小时的透明质酸和乳酸产量为5.6g/L和38g/L,乳酸产量下降42%;16小时的产量为7.3g/L和41g/L,透明质酸产量上升34%,乳酸产量下降37%。乳酸合成是兽疫链球菌在缺氧条件下主要的获取细胞内氧化力(NAD)的途径,因此细菌在发酵过程中产生大量的乳酸。而引入PHB合成途径为细胞提供了一条外源的NAD再生途径,从而可以降低乳酸途径的压力,使乳酸合成大大减少,乳酸的大量减少,使更多的的碳源能够流向别的代谢途径,从而使透明质酸产量也得到一定提高。Pick up Streptococcus zooepidemicus (Streptococcus zooepidemicus) ATCC 39920 and recombinant strains on the plate with an inoculation loop, insert them into 500mL Erlenmeyer flasks with 150mL seed medium respectively, and cultivate them on a shaker at 200rpm for 14-16 hours. The culture temperature was set at 37° C.; then the seeds were inserted into a fermenter (3 liters of liquid in a 7.5 liter fermenter (NBS Bioflo 3000, NJ, USA)) at an inoculum size of 10% (volume ratio). The temperature of the fermenter is controlled at 37°C, the pH value is 7.0, and the ventilation rate is 5L/min. The initial stirring speed is 200rpm. When the dissolved oxygen drops to 0, the speed is increased to 500rpm. When the dissolved oxygen drops to 0 again, the speed is adjusted to 650rpm, and maintained until the end of fermentation. Streptococcus zooepidemicus ATCC 39920 is fermented for 14 hours, and the Bacteria fermented for 16 hours. The contents of hyaluronic acid and lactic acid in the fermentation medium were determined respectively. The results showed that the hyaluronic acid (Hyaluronic acid, HA) and lactic acid yields of Streptococcus zooepidemicus (Streptococcus zooepidemicus) ATCC 39920 fermented for 14 hours were 5.4g/L and 65g/L, respectively. The 14-hour hyaluronic acid and lactic acid production of the recombinant bacteria were 5.6g/L and 38g/L, and the lactic acid production decreased by 42%; the 16-hour production was 7.3g/L and 41g/L, and the hyaluronic acid production increased by 34%. Lactic acid production decreased by 37%. Lactic acid synthesis is the main way for Streptococcus zooepidemicus to obtain intracellular oxidative power (NAD) under hypoxic conditions, so the bacteria produce a large amount of lactic acid during fermentation. The introduction of the PHB synthesis pathway provides cells with an exogenous NAD regeneration pathway, which can reduce the pressure on the lactic acid pathway, greatly reduce the lactic acid synthesis, and greatly reduce the lactic acid, so that more carbon sources can flow to other metabolic pathways. Thus, the production of hyaluronic acid is also improved to a certain extent.
其中,透明质酸含量测定采用Bitter-Muir氏法(Bitter T.,Muri HM.A modifieduronic acid carbazol reaction.Anal.Biochem.1962,4:330-334),发酵液的测量样品制备方法如下:a)取1mL发酵液准确稀释到4mL,6000转离心10分钟;b)取1mL上清加入到4mL无水乙醇中,振荡,6000转离心5分钟;c)弃去上清,加入2mL 0.2mmol/LNaCl,放置,间或振荡,直至最终溶解;d)加入4mL无水乙醇,振荡,6000转离心5分钟;e)弃去上清,沉淀用2mL去离子水溶解作为HA测定的样品。乳酸盐浓度的测定:采用HPLC(SpectroSYSTEM P2000,Thermo Separation Products,USA)法。折光检测器,离子交换柱Aminex HPX-87H,300mm×7.8mm,流动相为0.005mmol/L硫酸溶液,流速0.50mL/min。检测前,取0.2mL发酵样品,准确稀释到4mL,10000rpm/min离心5分钟,去上清,0.45μm滤膜过滤后作为色谱的样品。Wherein, hyaluronic acid content assay adopts Bitter-Muir's method (Bitter T., Muri HM.A modifieduronic acid carbazol reaction.Anal.Biochem.1962,4:330-334), the measurement sample preparation method of fermented liquid is as follows: a ) Dilute 1mL of fermentation broth to 4mL accurately, and centrifuge at 6000rpm for 10 minutes; b) Take 1mL of supernatant and add it to 4mL absolute ethanol, shake, and centrifuge at 6000rpm for 5 minutes; c) Discard the supernatant, add 2mL of 0.2mmol/ LNaCl, place, shake occasionally, until finally dissolved; d) Add 4 mL of absolute ethanol, shake, 6000 rpm centrifugation for 5 minutes; e) Discard the supernatant, and dissolve the precipitate with 2 mL of deionized water as a sample for HA determination. Determination of lactate concentration: adopt HPLC (SpectroSYSTEM P2000, Thermo Separation Products, USA) method. Refractive detector, ion exchange column Aminex HPX-87H, 300mm×7.8mm, mobile phase is 0.005mmol/L sulfuric acid solution, flow rate 0.50mL/min. Before testing, take 0.2mL fermentation sample, accurately dilute to 4mL, centrifuge at 10000rpm/min for 5 minutes, remove the supernatant, and filter it with a 0.45μm filter membrane as a chromatographic sample.
实施例2、在光滑球拟酵母中表达phbCAB基因影响丙酮酸产量Example 2, expression of phbCAB gene in Torulopsis glabrata affects pyruvate production
菌种:光滑球拟酵母(Torulopsis glabrata)CCTCCM202019Strain: Torulopsis glabrata CCTCCM202019
培养基:斜面和种子培养基(L):葡萄糖20g/L,蛋白胨10g/L,KH2PO4 1g/L,MgSO4·7H2O 0.15g/L,琼脂20g/L(斜面用),pH 5.5。Medium: slant and seed medium (L): glucose 20g/L, peptone 10g/L, KH 2 PO 4 1g/L, MgSO 4 7H2O 0.15g/L, agar 20g/L (for slant), pH 5.5 .
发酵培养基:葡萄糖80g/L,蛋白胨15g/L(含氮量12%),KH2PO4 5g/L,KCl 5g/L,MgSO4·7H2O 0.18g/L,烟酸4mg/L,盐酸硫胺素20μg/L,盐酸吡哆醇100μg/L,生物素10μg/L,核黄素50μg/L,pH5.0。Fermentation medium: glucose 80g/L, peptone 15g/L (nitrogen content 12%), KH 2 PO 4 5g/L, KCl 5g/L, MgSO 4 7H2O 0.18g/L, niacin 4mg/L, hydrochloric acid Thiamine 20 μg/L, pyridoxine hydrochloride 100 μg/L, biotin 10 μg/L, riboflavin 50 μg/L, pH 5.0.
将质粒pBHR68用BamHI和EcoRI酶切处理后,将获得的5.2kb的片段插入到质粒pPIC9K(购于Invitrogen公司)的BamHI和EcoRI的识别位点间,获得质粒pPICHB。这个质粒以电转化的方法转入到光滑球拟酵母(Torulopsis glabrata)CCTCCM202019中获得重组菌(含有pPICHB的光滑球拟酵母(Torulopsis glabrata)CCTCCM202019)进行发酵实验。After plasmid pBHR68 was digested with BamHI and EcoRI, the obtained 5.2 kb fragment was inserted between the BamHI and EcoRI recognition sites of plasmid pPIC9K (purchased from Invitrogen) to obtain plasmid pPICHB. This plasmid was transferred into Torulopsis glabrata CCTCCM202019 by electroporation to obtain a recombinant strain (Torulopsis glabrata CCTCCM202019 containing pPICHB) for fermentation experiments.
分别取斜面培养的光滑球拟酵母(Torulopsis glabrata)CCTCCM202019和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、200rpm下培养12小时后,以10%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,温度30℃,通气量2L/min,搅拌转速700rpm,用5mol/L KOH控制pH为5.0。当残糖降至4%时,按一定速率流加400g/L的葡萄糖液进行流加培养,发酵时间48小时。Torulopsis glabrata (Torulopsis glabrata) CCTCCM202019 and recombinant bacteria were inoculated into the seed medium (50mL/500mL Erlenmeyer flask) cultured on a slant, respectively, and cultured at 30°C and 200rpm for 12 hours. ) inoculum size into the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, a temperature of 30°C, an aeration rate of 2L/min, a stirring speed of 700rpm, and a pH of 5.0 controlled with 5mol/L KOH. When the residual sugar was reduced to 4%, 400g/L glucose solution was fed at a certain rate to carry out fed-batch culture, and the fermentation time was 48 hours.
取2mL发酵液在8000g离心5分钟后,上清用乳酸脱氢酶法测定丙酮酸含量(Lamperecht W,Heinz F.In:Methods of enzymatic analysis,ed.Bergmeyer,H.U.VCH,Weinheim,1984,6:pp570-577)。细胞用去离子水洗两次后真空冰干。结果表明重组菌的丙酮酸产量为68g/L,比光滑球拟酵母(Torulopsis glabrata)CCTCCM202019的52g/L提高了约31%。糖酵解产生丙酮酸的途径是消耗NAD的,丙酮酸在细胞内被代谢掉则是合成NAD的过程。因此细胞内大量积累丙酮酸需要一个高氧化力的环境。phbCAB基因的引入,能够为细胞提供氧化力,从而提高了丙酮酸的产量。After 2 mL of fermentation broth was centrifuged at 8000 g for 5 minutes, the content of pyruvate in the supernatant was determined by lactate dehydrogenase method (Lamperecht W, Heinz F.In: Methods of enzymatic analysis, ed. Bergmeyer, H.U.VCH, Weinheim, 1984, 6: pp570-577). Cells were washed twice with deionized water and then dried in vacuum. The results showed that the pyruvate production of the recombinant bacteria was 68g/L, which was about 31% higher than that of Torulopsis glabrata CCTCCM202019 (Torulopsis glabrata) CCTCCM202019's 52g/L. The pathway of glycolysis to produce pyruvate consumes NAD, and the metabolism of pyruvate in cells is the process of synthesizing NAD. Therefore, a large amount of pyruvate accumulation in cells requires a high oxidative environment. The introduction of the phbCAB gene can provide cells with oxidative power, thereby increasing the production of pyruvate.
实施例3、在酿酒酵母中表达phbCAB基因影响麦角固醇产量Embodiment 3, expression phbCAB gene influences ergosterol production in Saccharomyces cerevisiae
菌种:酿酒酵母(Saccharomyces cerevisiae)IFFI 01338(中国科学院微生物所菌种中心保藏号)Strain: Saccharomyces cerevisiae (Saccharomyces cerevisiae) IFFI 01338 (preservation number of the Culture Center of the Institute of Microbiology, Chinese Academy of Sciences)
斜面,种子培养基以及发酵培养基为:葡萄糖40g/L,蛋白胨20g/L,酵母粉10g/L,琼脂20g/L(斜面用),pH 5.5。Slope, seed medium and fermentation medium are: glucose 40g/L, peptone 20g/L, yeast powder 10g/L, agar 20g/L (for slope), pH 5.5.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到酿酒酵母(Saccharomyces cerevisiae)IFFI 01338中获得重组菌(含有pPICHB的酿酒酵母(Saccharomyces cerevisiae)IFFI 01338)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Saccharomyces cerevisiae IFFI 01338 by lithium acetate transformation to obtain recombinant bacteria (Saccharomyces cerevisiae IFFI 01338 containing pPICHB) for fermentation experiments.
分别取培养在新鲜斜面上的酿酒酵母(Saccharomyces cerevisiae)IFFI 01338和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、200rpm下培养12小时后,以10%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,温度30℃,通气量2L/min,溶氧自动控制在15%,控制pH为5.5。发酵10小时后每隔6小时补料一次,加入40g葡萄糖,重组菌培养基中加入遗传霉素0.2g/L。发酵30小时后,终止发酵。麦角固醇含量的测定参照文献(许旭萍,李惠珍,佘晨兴,谢华玲,林志军。麦角固醇 产生菌Torullopsis famata优化发酵条件的研究。生物学杂志,2002,19:15-17)。Saccharomyces cerevisiae IFFI 01338 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), cultivated at 30°C and 200rpm for 12 hours, and then inoculated with 10% (v /v) The inoculum is introduced into the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, a temperature of 30°C, a ventilation rate of 2L/min, an automatic control of dissolved oxygen at 15%, and a pH of 5.5. After 10 hours of fermentation, feed was fed once every 6 hours, 40 g of glucose was added, and geneticin 0.2 g/L was added to the recombinant culture medium. After 30 hours of fermentation, the fermentation was terminated. The determination of ergosterol content refers to the literature (Xu Xuping, Li Huizhen, She Chenxing, Xie Hualing, Lin Zhijun. Research on the optimization of fermentation conditions of ergosterol-producing bacteria Torullopsis famata. Journal of Biology, 2002, 19: 15-17).
测定结果表明重组菌的麦角固醇含量为1.2%,比酿酒酵母(Saccharomycescerevisiae)IFFI 01338的0.9%提高了33%。有研究表明,麦角固醇的合成具有氧代谢的特征,有氧条件有利于其合成。因此,phbCAB基因的引入,为细胞提供了更多的氧化力,从而促进了细胞内麦角固醇的合成。The measurement results show that the ergosterol content of the recombinant bacteria is 1.2%, which is 33% higher than the 0.9% of Saccharomycescerevisiae IFFI 01338. Studies have shown that the synthesis of ergosterol has the characteristics of oxygen metabolism, and aerobic conditions are conducive to its synthesis. Therefore, the introduction of phbCAB gene provides cells with more oxidative power, thereby promoting the synthesis of ergosterol in cells.
实施例4、在酿酒酵母中表达phbCAB基因提高酵母菌的抗逆能力Example 4, expressing phbCAB gene in Saccharomyces cerevisiae improves the stress resistance of yeast
菌种:酿酒酵母(Saccharomyces cerevisiae)ACCC 2063Strains: Saccharomyces cerevisiae ACCC 2063
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到酿酒酵母(Saccharomyces cerevisiae)ACCC 2063中获得重组菌(含有pPICHB的酿酒酵母(Saccharomyces cere visiae)ACCC 2063)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Saccharomyces cerevisiae ACCC 2063 by lithium acetate transformation to obtain recombinant bacteria (Saccharomyces cerevisiae ACCC 2063 containing pPICHB) for fermentation experiments.
分别取培养在新鲜斜面上的酿酒酵母(Saccharomyces cerevisiae)ACCC 2063和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、200rpm下培养12小时后,以10%(v/v)接种量接入新培养基。培养基成分为:葡萄糖40g/L,蛋白胨20g/L,酵母粉10g/L,琼脂20g/L(斜面用),pH 5.5。酿酒酵母(Saccharomyces cerevisiae)ACCC2063和重组菌的种子在接入新培养基之前,各分为三组,一组在48℃放置1小时,一组在-80℃放置48小时,另一组不做处理。然后将种子分别接入新培养基后,测定其生长曲线。计算未经处理的种子与经过处理的种子延滞期时间之差。结果表明重组菌的种子经过冷或热处理后,其活性并未受到大幅降低,即延滞期时间与未经处理的种子相差不大。而酿酒酵母(Saccharomyces cerevisiae)ACCC 2063的种子活性经过冷或热处理后受到较大的影响。经过热处理后,酿酒酵母(Saccharomyces cerevisiae)ACCC 2063的时间差为7小时,重组菌时间差为1小时,两个相差6小时。即是说积累PHA的细胞具有更好的恶劣环境耐受性,具有更强的生命力。这对于酿酒工业有重要的意义,由于发酵过程中酵母死亡会影响发酵,同时带来不适的口味,因此强壮的菌株有着更好的应用前景。Saccharomyces cerevisiae (Saccharomyces cerevisiae) ACCC 2063 and recombinant bacteria cultured on fresh slopes were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively, cultivated at 30°C and 200rpm for 12 hours, and then inoculated with 10% (v /v) The inoculum is introduced into the new medium. The medium components are: glucose 40g/L, peptone 20g/L, yeast powder 10g/L, agar 20g/L (for slant), pH 5.5. The seeds of Saccharomyces cerevisiae (Saccharomyces cerevisiae) ACCC2063 and the recombinant bacteria were divided into three groups before being inserted into the new medium, one group was placed at 48°C for 1 hour, one group was placed at -80°C for 48 hours, and the other group was left untreated. deal with. Then the seeds were respectively inserted into the new medium, and their growth curves were measured. Calculate the difference in lag time between untreated and treated seeds. The results showed that the activity of the seeds of the recombinant bacteria was not greatly reduced after cold or heat treatment, that is, the lag phase time was not much different from that of untreated seeds. However, the seed activity of Saccharomyces cerevisiae ACCC 2063 was greatly affected by cold or heat treatment. After heat treatment, the time difference of Saccharomyces cerevisiae ACCC 2063 is 7 hours, the time difference of recombinant bacteria is 1 hour, and the difference of the two is 6 hours. That is to say, cells accumulating PHA have better tolerance to harsh environments and stronger vitality. This is of great significance to the brewing industry, because the death of yeast during fermentation will affect fermentation and bring unpleasant taste, so strong strains have better application prospects.
实施例5、在枯草芽孢杆菌中表达phbCAB影响肌苷的生物合成Example 5. Expression of phbCAB in Bacillus subtilis affects the biosynthesis of inosine
菌种:枯草芽孢杆菌(Bacillus subtilis)ATCC 19162。Bacterial species: Bacillus subtilis ATCC 19162.
种子培养基成分为葡萄糖20g/L,酵母粉15g/L,蛋白胨10g/L,玉米液7g/L,氯化钠2.5g/L,尿素2g/L,pH值7.0。发酵培养基成分为葡萄糖140g/L,玉米液16g/L,酵母粉16g/L,尿素9g/L,硫酸铵16g/L,七水硫酸镁4g/L,磷酸氢二钾5g/L,碳酸钙20g/L。The composition of the seed medium is glucose 20g/L, yeast powder 15g/L, peptone 10g/L, corn solution 7g/L, sodium chloride 2.5g/L, urea 2g/L, pH 7.0. The composition of the fermentation medium is glucose 140g/L, corn liquid 16g/L, yeast powder 16g/L, urea 9g/L, ammonium sulfate 16g/L, magnesium sulfate heptahydrate 4g/L, dipotassium hydrogen phosphate 5g/L, carbonic acid Calcium 20g/L.
按照实施例1方法获得的质粒pEUHB以电转化的方法转入到枯草芽孢杆菌(Bacillussubtilis)ATCC 19162中获得重组菌(含有pEUHB的枯草芽孢杆菌(Bacillus subtilis)ATCC 19162)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transferred into Bacillus subtilis (Bacillus subtilis) ATCC 19162 by electrotransformation to obtain recombinant bacteria (Bacillus subtilis (Bacillus subtilis) ATCC 19162 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的枯草芽孢杆菌(Bacillus subtilis)ATCC 19162和重 组菌分别接种到种子培养基(50mL/500mL锥形瓶),在32℃、200rpm下培养12小时后,以5%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,自动控制温度35℃,pH 6.5,搅拌速度600rpm,通气量1L/min,到肌苷产量不再增加停止发酵,发酵时间68小时。肌苷含量用HPLC测定,流动相为0.5%磷酸氢二钾,流速1.2mL/min,色谱柱为HypersilODS C18反相柱,检测波长为254nm。HPLC测定结果表明枯草芽孢杆菌(Bacillussubtilis)ATCC 19162的苷产量为19g/L,重组菌的产量为24g/L,提高了26%。在细胞内代谢途径中,为肌苷合成提供前体的单磷酸己糖途径会消耗大量的NADP,同时从6-磷酸葡萄糖到磷酸戊糖途径的调控酶6-磷酸葡萄糖脱氢酶受到NADPH的反馈抑制,因此NADPH的减少能促进葡萄糖向磷酸戊糖途径的转化。总的来说,肌苷合成是一个需要大量氧化力的生化代谢过程,高的NADP/NADPH水平能够有效的促进肌苷的合成。phbCAB基因的引入,正能实现这一要求,因此能够显著的提高肌苷的产量。Bacillus subtilis (Bacillus subtilis) ATCC 19162 and recombinant bacteria cultured on fresh slopes were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively. (v/v) The inoculum size was inserted into the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, automatically controls the temperature at 35°C, pH 6.5, stirring speed at 600rpm, and ventilation at 1L/min. Stop the fermentation until the inosine production no longer increases, and the fermentation time is 68 hours. The inosine content was determined by HPLC, the mobile phase was 0.5% dipotassium hydrogen phosphate, the flow rate was 1.2mL/min, the chromatographic column was a HypersilODS C18 reverse-phase column, and the detection wavelength was 254nm. The results of HPLC measurement showed that the glycoside yield of Bacillus subtilis (Bacillus subtilis) ATCC 19162 was 19g/L, and the yield of the recombinant strain was 24g/L, an increase of 26%. Among intracellular metabolic pathways, the monophosphate hexose pathway that provides precursors for inosine synthesis consumes a large amount of NADP, while the regulatory enzyme 6-phosphate glucose dehydrogenase from glucose 6-phosphate to pentose phosphate pathway is regulated by NADPH Feedback inhibition, thus reduction of NADPH can promote the conversion of glucose to pentose phosphate pathway. In general, inosine synthesis is a biochemical metabolic process that requires a large amount of oxidative power, and high NADP/NADPH levels can effectively promote inosine synthesis. The introduction of the phbCAB gene can fulfill this requirement, thus significantly increasing the production of inosine.
实施例6、在嗜碱芽孢杆菌中表达phbCAB基因影响弹性蛋白酶产量Embodiment 6, expressing phbCAB gene in alkalophilic bacillus influences elastase production
菌种:嗜碱芽孢杆菌(Bacillus alcalophilus)Ya-B(Takagi H,Tsai YC,NakamoriS,Yamasaki M.Improved Production and Recovery of Alkaline Elastase fromAlkalophilic Bacillus Strains by a Change of Medium Composition.Biosci BiotechBiochem,1995,59:1591-1592)Bacterial species: Bacillus alcalophilus Ya-B (Takagi H, Tsai YC, Nakamori S, Yamasaki M. Improved Production and Recovery of Alkaline Elastase from Alkalophilic Bacillus Strains by a Change of Medium Composition. Biosci1 Biotech 5 Biochem, 5 1591-1592)
种子培养基成分为葡萄糖10g/L,蛋白胨5g/L,酵母粉5g/L,磷酸氢二钾1g/L,七水硫酸镁0.2g/L,氯化钠5g/L,碳酸钠10g/L。发酵培养基成分为葡萄糖20g/L,豆饼粉5g/L,酵母粉2.5g/L,磷酸氢二钾0.75g/L,七水硫酸镁0.2g/L,氯化钠20g/L,碳酸钠10g/L。The composition of the seed medium is glucose 10g/L, peptone 5g/L, yeast powder 5g/L, dipotassium hydrogen phosphate 1g/L, magnesium sulfate heptahydrate 0.2g/L, sodium chloride 5g/L, sodium carbonate 10g/L . The composition of the fermentation medium is glucose 20g/L, bean cake powder 5g/L, yeast powder 2.5g/L, dipotassium hydrogen phosphate 0.75g/L, magnesium sulfate heptahydrate 0.2g/L, sodium chloride 20g/L, sodium carbonate 10g/L.
将实施例1中获得的pEUHB以电转化的方法转入到嗜碱芽孢杆菌(Bacillusalcalophilus)Ya-B中获得重组菌(含有pEUHB的嗜碱芽孢杆菌(Bacillus alcalophilus)Ya-B)进行发酵实验。获得重组菌进行发酵实验。The pEUHB obtained in Example 1 was transformed into Bacillus alcalophilus Ya-B by electrotransformation to obtain a recombinant strain (Bacillus alcalophilus Ya-B containing pEUHB) for fermentation experiments. Recombinant bacteria were obtained for fermentation experiments.
分别取培养在新鲜斜面上的嗜碱芽孢杆菌嗜碱芽孢杆菌(Bacillus alcalophilus)Ya-B和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在37℃、250rpm下培养12小时后,以1%(v/v)接种量接入发酵培养基(50mL/500mL锥形瓶),37℃,250rpm培养48小时,停止发酵。将发酵液8000g离心十分钟,收集上清,用硫酸铵分级盐析(30%-65%饱和度),沉淀溶于0.05mol/l pH 9.0硼酸缓冲液中,得到粗酶液。1mL粗酶液中与20mg地衣红-弹性蛋白中分别加入1mL 0.05mol/L pH 9.0硼酸缓冲液于55℃水浴保温一小时,不时振荡。分别以2mL 0.7mol/L pH6.0磷酸缓冲液终止反应,8000g离心10分钟,上清于590nm测吸光度值。20mg地衣红-弹性蛋白完全水解后,590nm处光吸收值的一半为10个酶活力单位。Bacillus alcalophilus Ya-B and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), and cultured at 37°C and 250rpm for 12 hours Afterwards, insert the fermentation medium (50mL/500mL Erlenmeyer flask) with 1% (v/v) inoculation amount, cultivate for 48 hours at 37°C and 250rpm, and stop the fermentation. The fermentation broth was centrifuged at 8000g for ten minutes, the supernatant was collected, and the ammonium sulfate was used for graded salting out (30%-65% saturation), and the precipitate was dissolved in 0.05mol/l pH 9.0 boric acid buffer to obtain a crude enzyme solution. Add 1mL 0.05mol/L pH 9.0 boric acid buffer solution to 1mL crude enzyme solution and 20mg lichenin-elastin respectively, and incubate in a water bath at 55°C for one hour, shaking from time to time. The reaction was terminated with 2 mL of 0.7 mol/L pH 6.0 phosphate buffer, centrifuged at 8000 g for 10 minutes, and the absorbance of the supernatant was measured at 590 nm. After 20mg lichenin-elastin is completely hydrolyzed, half of the light absorption value at 590nm is 10 enzyme activity units.
经过48小时发酵培养后,重组菌的酶活198U/mL比嗜碱芽孢杆菌(Bacillusalcalophilus)176U/mLYa-B高12.5%,重组菌具有更高的弹性蛋白酶产量。研究表明, 高溶氧有利于弹性蛋白酶的合成,其合成是一个需要氧化力的过程。phbCAB基因的引入,正好能够为细胞提供更多的氧化力,这是有利于弹性蛋白酶的合成的。After 48 hours of fermentation and cultivation, the enzyme activity of the recombinant bacteria was 198 U/mL, which was 12.5% higher than that of Bacillus alcalophilus (Bacillus alcalophilus) 176 U/mLYa-B, and the recombinant bacteria had higher elastase production. Studies have shown that high dissolved oxygen is beneficial to the synthesis of elastase, and its synthesis is a process that requires oxidative power. The introduction of phbCAB gene can just provide more oxidative power for cells, which is beneficial to the synthesis of elastase.
实施例7、在红酵母中表达phbCAB基因影响类胡萝卜素产量Example 7, expressing phbCAB gene in Rhodotorula saccharomyces affects carotenoid production
菌种:红酵母(Rhodotorula glutinis)NCIM 3353(印度国家工业微生物菌种保存中心)Strains: Rhodotorula glutinis NCIM 3353 (National Center for Industrial Microbiology Preservation of India)
斜面培养基成分为:葡萄糖35g/L,麦芽提取物3g/L,酵母粉2g/L,KH2PO4 3g/L,K2HPO4 3g/L,MgSO4·7H2O 0.2g/L,琼脂20g/L,pH 6.0。The composition of the slant medium is: glucose 35g/L, malt extract 3g/L, yeast powder 2g/L, KH 2 PO 4 3g/L, K 2 HPO 4 3g/L, MgSO 4 7H2O 0.2g/L, agar 20g/L, pH 6.0.
液体培养基为:葡萄糖25g/L,酵母粉10g/L,KH2PO42g/L,K2HPO42g/L,pH 6.0。The liquid medium is: glucose 25g/L, yeast powder 10g/L, KH 2 PO 4 2g/L, K 2 HPO 4 2g/L, pH 6.0.
将实施例2中获得的pPICHB以乙酸锂转化的方法转入到红酵母(Rhodotorulaglutinis)NCIM 3353中获得重组菌(含有pPICHB的红酵母(Rhodotorula glutinis)NCIM 3353)进行发酵实验。The pPICHB obtained in Example 2 was transformed into Rhodotorula glutinis NCIM 3353 by lithium acetate transformation to obtain recombinant bacteria (Rhodotorula glutinis NCIM 3353 containing pPICHB) for fermentation experiments.
分别取培养在新鲜斜面上的红酵母(Rhodotorula glutinis)NCIM 3353和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在28℃、240rpm下培养18小时后,以5%(v/v)接种量接入新鲜液体培养基(100mL/500mL锥形瓶),28℃,240rpm培养72小时。发酵液3000rpm离心十分钟收集菌体,用去离子水洗两次后冰干称重。每克菌体加5mL 3mol/L HCl,室温下浸泡1小时,在沸水浴中煮4分钟,迅速冷却,3000g离心十五分钟,弃去上清,沉淀用去离子水洗两次后加3mL丙酮,室温下振荡三十分钟,再3000g离心二十分钟,上清即为类胡萝卜素提取液,将提取液稀释后,测475nm处吸光度值,按下式计算胡萝卜素含量:胡萝卜素含量(μg/g菌体)=A475×V×D/0.16w。A475为胡萝卜素吸光度值,V为提取所用溶剂量(mL),D为样品稀释倍数,w为菌体量(g),0.16为胡萝卜素的摩尔消光系数。Red yeast (Rhodotorula glutinis) NCIM 3353 and recombinant bacteria cultured on fresh slopes were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively. /v) The inoculum is transferred into fresh liquid culture medium (100 mL/500 mL Erlenmeyer flask), cultured at 28° C. and 240 rpm for 72 hours. The fermentation broth was centrifuged at 3000rpm for ten minutes to collect the bacterial cells, washed twice with deionized water, then freeze-dried and weighed. Add 5mL of 3mol/L HCl per gram of bacteria, soak at room temperature for 1 hour, boil in a boiling water bath for 4 minutes, cool rapidly, centrifuge at 3000g for 15 minutes, discard the supernatant, wash the precipitate twice with deionized water, and then add 3mL of acetone , shake at room temperature for 30 minutes, and then centrifuge at 3000g for 20 minutes. The supernatant is the carotenoid extract. After diluting the extract, measure the absorbance value at 475nm, and calculate the carotene content according to the following formula: carotene content (μg /g bacterial cells)=A 475 ×V×D/0.16w. A475 is the absorbance value of carotene, V is the amount of solvent used for extraction (mL), D is the dilution factor of the sample, w is the amount of bacteria (g), and 0.16 is the molar extinction coefficient of carotene.
结果表明红酵母(Rhodotorula glutinis)NCIM 3353的类胡萝卜素含量为76μg/g,而重组菌的含量为92μg/g,提高了21%。高氧化力环境有利于类胡萝卜素的合成。phbCAB基因的导入,能够为细胞提供氧化力,从而促进类胡萝卜素的合成。The results showed that the content of carotenoids in Rhodotorula glutinis NCIM 3353 was 76 μg/g, while that of the recombinant strain was 92 μg/g, an increase of 21%. High oxidative environment is conducive to the synthesis of carotenoids. The introduction of phbCAB gene can provide cells with oxidative power, thereby promoting the synthesis of carotenoids.
实施例8、在谷氨酸棒杆菌种表达phbCAB影响谷氨酰胺合成Embodiment 8, expressing phbCAB in Corynebacterium glutamicum species affects glutamine synthesis
菌种:谷氨酸棒杆菌(Corynebacterium glutamicum)ATCC 13032。Bacterial species: Corynebacterium glutamicum ATCC 13032.
种子培养基及发酵成分为:一水葡萄糖50g/L,(NH4)2SO4 7.5g/L,NaCl 2g/L,CH3COONa·2H2O 3g/L,CaCl2·2H2O 0.1g/L,K2HPO4·3H2O 8g/L,KH2PO4 2g/L,尿素5g/L,MgSO4·7H2O 0.5g/L,盐溶液10mL/l,生物素6μg/L,维生素B1 1mg/L,卡那霉素20mg/L。其中盐溶液为:MnSO4·7H2O 20mg,Na2B4O7·10H2O 2mg,(NH4)5MO7O24·4H2O 1mg,FeCl2·6H2O 20mg,ZnSO4·7H2O 5mg,CuSO4·5H2O 2mg,FeSO4·7H2O 250mg,溶于50mL 1mol/L HCl中。Seed medium and fermentation components are: glucose monohydrate 50g/L, (NH 4 ) 2 SO 4 7.5g/L, NaCl 2g/L, CH 3 COONa·2H 2 O 3g/L, CaCl 2 ·2H 2 O 0.1 g/L, K 2 HPO 4 3H 2 O 8g/L, KH 2 PO 4 2g/L, urea 5g/L, MgSO 4 7H 2 O 0.5g/L, salt solution 10mL/l, biotin 6μg/L L, Vitamin B1 1mg/L, Kanamycin 20mg/L. The salt solution is: MnSO 4 7H 2 O 20mg, Na 2 B 4 O 7 10H 2 O 2mg, (NH 4 ) 5 MO 7 O 24 4H 2 O 1mg, FeCl 2 6H 2 O 20mg, ZnSO 4 · 7H 2 O 5 mg, CuSO 4 · 5H 2 O 2 mg, FeSO 4 · 7H 2 O 250 mg, dissolved in 50 mL of 1mol/L HCl.
将实施例1中获得的质粒pEUHB以电转化的方法转入到谷氨酸棒杆菌(Corynebacterium glutamicum)ATCC 13032中获得重组菌(含有pEUHB的谷氨酸棒杆 菌(Corynebacterium glutamicum)ATCC 13032)进行发酵实验。The plasmid pEUHB obtained in Example 1 was transferred to Corynebacterium glutamicum (Corynebacterium glutamicum) ATCC 13032 by electrotransformation to obtain recombinant bacteria (corynebacterium glutamicum (Corynebacterium glutamicum) ATCC 13032 containing pEUHB) and carried out Fermentation experiments.
分别取培养在新鲜斜面上的谷氨酸棒杆菌(Corynebacterium glutamicum)ATCC13032和重组菌,分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、200rpm下培养12小时后,以5%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,自动控制温度30℃,pH 6.5,搅拌速度600rpm,通气量1L/min,发酵48小时,停止发酵,测定发酵液中谷氨酰胺含量。谷氨酰胺的测定用新华3号滤纸在室温下用不饱和法展开,展开剂用体积比为5∶2的正丙醇和浓氨水的混合液,上行法展开。称取谷氨酰胺标准品,配成1%,1.5%,2%,2.5%,3%等不同质量浓度的溶液,每种溶液点样1μL,发酵液离心取上清点样1μL。展析完成后风干滤纸,用0.5g/L茚三酮丙酮溶液显色,105℃烘干5分钟,滤纸上出现紫红色氨基酸斑点,剪下氨基酸斑点,用洗脱液(体积比为2∶38的0.1g/L CuSO4·5H2O和75%乙醇的混合液)洗脱30分钟,然后在520nm处测光吸收,从标准曲线上求得发酵液中谷氨酰胺含量。结果表明谷氨酸棒杆菌(Corynebacterium glutamicum)ATCC 13032的谷氨酰胺产量为11g/L,重组菌产量为14g/L,提高约27%。phbCAB基因的引入,能够减少丙酮酸向乳酸的代谢,促进丙酮酸转化为乙酰辅酶A,而谷氨酰胺的前体正是三羧酸循环的中间产物,这样能够为谷氨酰胺的合成提供更多的前体,因此产量得到提高。Corynebacterium glutamicum (Corynebacterium glutamicum) ATCC13032 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), cultured at 30°C and 200rpm for 12 hours, then 5 % (v/v) of the inoculum added to the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, automatic temperature control at 30°C, pH 6.5, stirring speed at 600rpm, ventilation rate at 1L/min, fermentation for 48 hours, stop fermentation, and measure glutamine content in the fermentation broth. Glutamine was determined using Xinhua No. 3 filter paper at room temperature by the unsaturated method, and the developing agent was a mixture of n-propanol and concentrated ammonia water with a volume ratio of 5:2, and the ascending method was used. Weigh the glutamine standard substance and make solutions with different mass concentrations such as 1%, 1.5%, 2%, 2.5%, 3%, etc., spot 1 μL of each solution, and centrifuge the fermentation broth to take 1 μL of the supernatant for spotting. After the analysis is completed, air-dry the filter paper, develop color with 0.5g/L ninhydrin acetone solution, and dry at 105°C for 5 minutes. Purple-red amino acid spots appear on the filter paper. 38 (0.1g/L CuSO 4 ·5H 2 O and 75% ethanol mixed solution) was eluted for 30 minutes, then the light absorption was measured at 520nm, and the glutamine content in the fermentation broth was obtained from the standard curve. The results showed that the glutamine output of Corynebacterium glutamicum (Corynebacterium glutamicum) ATCC 13032 was 11 g/L, and that of the recombinant strain was 14 g/L, which was increased by about 27%. The introduction of phbCAB gene can reduce the metabolism of pyruvate to lactic acid, promote the conversion of pyruvate into acetyl-CoA, and the precursor of glutamine is the intermediate product of the tricarboxylic acid cycle, which can provide more glutamine synthesis. more precursors, thus increasing the yield.
实施例9、在乳酸发酵短杆菌中表达phbCAB影响赖氨酸产量Example 9. Expression of phbCAB in Brevibacterium lactofermentum affects lysine production
菌种:乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269。Strains: Brevibacterium lactofermentum ATCC 31269.
斜面培养基成分为:牛肉膏0.3%,蛋白胨1%,NaCl 0.5%,琼脂2%,pH 7.2-7.4。The composition of the slant medium is: beef extract 0.3%, peptone 1%, NaCl 0.5%, agar 2%, pH 7.2-7.4.
种子培养基成分为:葡萄糖2%,KH2PO40.1%,(NH4)2SO41%,MgSO4·7H2O 0.04%,FeSO4·7H2O 1mg/L,MnSO4·H2O 0.8mg/L,生物素5μg/L,VB120mg/L,豆饼水解液5%,pH 7.0。The composition of the seed medium is: glucose 2%, KH 2 PO 4 0.1%, (NH 4 ) 2 SO 4 1%, MgSO 4 ·7H 2 O 0.04%, FeSO 4 ·7H 2 O 1mg/L, MnSO 4 ·H 2 O 0.8mg/L, biotin 5μg/L, VB 120mg/L, bean cake hydrolyzate 5%, pH 7.0.
发酵培养基成分为:葡萄糖14%,KH2PO40.1%,(NH4)2SO44%,MgSO4·7H2O 0.04%,FeSO4·7H2O 1mg/L,MnSO4·H2O 0.8mg/L,生物素5μg/L,维生素B1 20mg/L,豆饼水解液5%,碳酸钙2%,pH 7.0。The composition of the fermentation medium is: glucose 14%, KH 2 PO 4 0.1%, (NH 4 ) 2 SO 4 4%, MgSO 4 ·7H 2 O 0.04%, FeSO 4 ·7H 2 O 1mg/L, MnSO 4 ·H 2 O 0.8mg/L, biotin 5μg/L, vitamin B1 20mg/L, bean cake hydrolyzate 5%, calcium carbonate 2%, pH 7.0.
将实施例1中获得的质粒pEUHB以电转化的方法转入到乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269中获得重组菌(含有pEUHB的乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269)进行发酵实验。The plasmid pEUHB obtained in Example 1 was transformed into Brevibacterium lactofermentum (Brevibacterium lactofermentum) ATCC 31269 by electroporation to obtain recombinant bacteria (Brevibacterium lactofermentum (Brevibacterium lactofermentum) ATCC 31269 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269和重组菌,接种于一级种子培养基中,500mL摇瓶装液量30mL,于摇床上30℃,110rpm,培养12小时。接种2mL一级种子于30mL二级种子培养基中,于摇床上30℃,110rpm,培养10-12小时。然后取1mL二级种子接种于发酵培养基,500mL摇瓶装液量20mL,30℃,110rpm,培养72小时。赖氨酸含量用茚三酮比色法测量:发酵液经3500g离心15分钟,取上清0.1mL稀释到100mL,取1mL稀释液加入到4mL茚三酮试剂(取水合茚三酮1.0g,加入乙二醇甲醚75mL,另取1.34g CuCl2·2H2O加入pH1.3柠檬酸缓 冲液25mL中,混合两种溶液后,再加蒸馏水100mL,得到茚三酮溶液)中,沸水浴加热20分钟,快速冷却后测定478nm处吸光度值。根据标准曲线测定赖氨酸含量。Brevibacterium lactofermentum (Brevibacterium lactofermentum) ATCC 31269 and recombinant bacteria cultured on fresh slant were taken respectively, inoculated in primary seed medium, filled with 30 mL of liquid in a 500 mL shaker flask, and cultivated on a shaker at 30°C and 110 rpm for 12 hours. Inoculate 2mL of primary seeds into 30mL of secondary seed medium, and culture on a shaker at 30°C and 110rpm for 10-12 hours. Then take 1 mL of the secondary seeds and inoculate them into the fermentation medium, fill a 500 mL shake flask with a volume of 20 mL, culture at 30° C. and 110 rpm for 72 hours. The lysine content was measured by the ninhydrin colorimetric method: the fermented liquid was centrifuged at 3500g for 15 minutes, 0.1mL of the supernatant was taken and diluted to 100mL, and 1mL of the diluted solution was added to 4mL of the ninhydrin reagent (take 1.0g of ninhydrin hydrate, Add 75 mL of ethylene glycol methyl ether, and add another 1.34 g of CuCl 2 2H 2 O into 25 mL of pH 1.3 citric acid buffer, mix the two solutions, add 100 mL of distilled water to obtain ninhydrin solution), boil water bath After heating for 20 minutes, measure the absorbance value at 478nm after rapid cooling. The lysine content was determined according to the standard curve.
结果表明乳酸发酵短杆菌(Brevibacterium lactofermentum)ATCC 31269赖氨酸产量为53g/L,而重组菌的产量为58g/L,约有10%的提高。在合成代谢中,赖氨酸的前体物质草酰乙酸有三条途径合成,但都与丙酮酸和NADP/NADPH的代谢有关,因此phbCAB基因的导入能对赖氨酸的产量产生影响。The results showed that the lysine yield of Brevibacterium lactofermentum (Brevibacterium lactofermentum) ATCC 31269 was 53g/L, while the yield of the recombinant strain was 58g/L, about 10% increased. In anabolism, there are three pathways for the synthesis of oxaloacetate, the precursor of lysine, but they are all related to the metabolism of pyruvate and NADP/NADPH. Therefore, the introduction of phbCAB gene can affect the production of lysine.
实施例10、在大肠杆菌中表达phbCAB基因影响苯丙氨酸产量Example 10, expressing phbCAB gene in Escherichia coli affects the production of phenylalanine
菌种:大肠杆菌(Escherichia.coli)ATCC 31882。Bacterial species: Escherichia coli (Escherichia.coli) ATCC 31882.
种子培养基成分为:蛋白胨1%,酵母粉0.5%,NaCl 1%,葡萄糖2%,pH 7.5。The composition of the seed medium is: peptone 1%, yeast powder 0.5%, NaCl 1%, glucose 2%, pH 7.5.
发酵培养基成分为:Na2HPO4·12H2O:20g/L,柠檬酸钠6g/L,谷氨酸钠0.4g/L,酪氨酸0.6g/L,葡萄糖20g/L。The components of the fermentation medium are: Na 2 HPO 4 ·12H 2 O: 20g/L, sodium citrate 6g/L, sodium glutamate 0.4g/L, tyrosine 0.6g/L, glucose 20g/L.
补料培养基:CaCl2·2H2O 0.6g/L,酪氨酸500mg/L,葡萄糖500g/L,MgSO4·7H2O1g/L,维生素B1500mg/L,氨水28%。Feed medium: CaCl 2 ·2H 2 O 0.6g/L, tyrosine 500mg/L, glucose 500g/L, MgSO 4 ·7H 2 O 1g/L, vitamin B1500mg/L, ammonia water 28%.
将pBHR68质粒以电转化的方法转入到大肠杆菌(Escherichia.coli)ATCC 31882中获得重组菌(含有pBHR68的大肠杆菌(Escherichia.coli)ATCC 31882)进行发酵实验。The pBHR68 plasmid was transformed into Escherichia coli (Escherichia.coli) ATCC 31882 by electroporation to obtain recombinant bacteria (Escherichia.coli ATCC 31882 containing pBHR68) for fermentation experiments.
分别取培养在新鲜斜面上的大肠杆菌(Escherichia.coli)ATCC 31882和重组菌,分别接种到种子培养基(50mL/500mL锥形瓶),在37℃、200rpm下培养12小时后,以5%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,自动控制温度38.5℃,pH 7.0,溶氧20%,通过补料控制葡萄糖浓度在1.5%,发酵时间48小时。苯丙氨酸含量测定方法如下:取2μL发酵液上清点样于滤纸上,置于层析液中单向上行展析16小时,烘干后以茚三酮喷涂显色,以标准氨基酸为对照,剪下层析后的着色斑点,置于65%的乙醇溶液中脱色2小时,测定520nm下光吸收,氨基酸量=标准氨基酸溶液浓度×被测发酵液光密度/标准氨基酸溶液光密度。Take Escherichia coli (Escherichia.coli) ATCC 31882 and recombinant bacteria cultured on fresh slant respectively, inoculate them into seed culture medium (50mL/500mL Erlenmeyer flask) respectively, cultivate them at 37°C and 200rpm for 12 hours, then add 5% (v/v) The inoculum size was inserted into the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, automatically controls the temperature at 38.5°C, pH 7.0, dissolved oxygen at 20%, and controls the glucose concentration at 1.5% by feeding, and the fermentation time is 48 hours. The method for determining the content of phenylalanine is as follows: take 2 μL of the supernatant of the fermentation broth and spot it on the filter paper, place it in the chromatographic fluid for one-way upward analysis for 16 hours, spray it with ninhydrin to develop the color after drying, and use the standard amino acid as the control , cut off the colored spots after chromatography, place in 65% ethanol solution for decolorization for 2 hours, measure light absorption at 520nm, amino acid amount=standard amino acid solution concentration×measured fermentation broth optical density/standard amino acid solution optical density.
结果表明大肠杆菌(Escherichia.coli)ATCC 31882发酵得到苯丙氨酸浓度为8.2g/L,而重组菌产物浓度为10.6g/L,提高了29%。对于大肠杆菌的氨基酸合成,如果用全局的代谢调控能够取得较好的效果。而phbCAB基因的引入,一个有效的调控是能增强磷酸戊糖途径,有利于氨基酸的合成。The results showed that Escherichia coli (Escherichia.coli) ATCC 31882 was fermented to obtain a concentration of phenylalanine of 8.2 g/L, while the concentration of the recombinant bacterium product was 10.6 g/L, an increase of 29%. For the amino acid synthesis of Escherichia coli, better results can be achieved if global metabolic regulation is used. The introduction of phbCAB gene, an effective regulation is to enhance the pentose phosphate pathway, which is beneficial to the synthesis of amino acids.
实施例11、在荧光假单胞菌中表达phbCAB基因影响葡萄糖酸产量Example 11. Expression of phbCAB gene in Pseudomonas fluorescens affects gluconic acid production
菌种:荧光假单胞菌(Pseudomonas fluorescens)AS 1.55Bacteria: Pseudomonas fluorescens AS 1.55
斜面培养基成分为:牛肉膏0.5%,蛋白胨1%,NaCl 0.5%,琼脂2%,pH7.0。The composition of the slant medium is: beef extract 0.5%, peptone 1%, NaCl 0.5%, agar 2%, pH 7.0.
种子培养基成分为:葡萄糖2%,玉米浆1%,尿素0.2%,KH2PO40.2%,MgSO4·7H2O 0.05%,pH7.0。The composition of the seed medium is: 2% glucose, 1% corn steep liquor, 0.2% urea, 0.2% KH 2 PO 4 , 0.05% MgSO 4 ·7H 2 O, pH 7.0.
发酵培养基成分为:淀粉水解糖14%,玉米浆1.5%,轻质碳酸钙4%,pH 6.7。The composition of the fermentation medium is: starch hydrolysis sugar 14%, corn steep liquor 1.5%, light calcium carbonate 4%, pH 6.7.
将质粒pBHR68经过HindIII和BamHI酶切处理后,插入到质粒pBBR1MCS2(Kovach ME,Elzer PH,Hill DS,Robertson GT,Farris MA,Roop RM,Peterson KM.Four newderivatives of the broad-host-range cloning vector pBBR1MCS,carrying differentantibiotic-resistance cassettes.Gene.1995,166:175-176)的HindIII和BamHI的识别位点间,获得质粒pBBRHB。这个质粒以电转化的方法转入到荧光假单胞菌(Pseudomonasfluorescens)AS 1.55中获得重组菌(含有pBBRHB的荧光假单胞菌(Pseudomonasfluorescens)AS 1.55)进行发酵实验。After the plasmid pBHR68 was digested with HindIII and BamHI, it was inserted into the plasmid pBBR1MCS2 (Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM, Peterson KM. Four new derivatives of the broad-host-range cloning vector pBBR1MCS , carrying differentantibiotic-resistance cassettes.Gene.1995,166:175-176) between the recognition sites of HindIII and BamHI, the plasmid pBBRHB was obtained. The plasmid was transformed into Pseudomonas fluorescens AS 1.55 by electroporation to obtain recombinant bacteria (Pseudomonas fluorescens AS 1.55 containing pBBRHB) for fermentation experiments.
分别取培养在新鲜斜面上的荧光假单胞菌(Pseudomonas fluorescens)AS 1.55和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、230rpm下培养16小时后,以10%(v/v)接种量接入发酵培养基。发酵瓶500mL装液量50mL,在30℃、230rpm下培养72小时。发酵液中酮基葡萄糖酸含量用旋光法测定:发酵液中酮基葡萄糖酸含量=25℃下发酵液旋光度绝对值/0.88。Pseudomonas fluorescens (Pseudomonas fluorescens) AS 1.55 and recombinant bacteria cultured on fresh slant were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively. % (v/v) of the inoculum added to the fermentation medium. A 500-mL fermentation bottle was filled with 50 mL of liquid, and cultured at 30° C. and 230 rpm for 72 hours. The content of ketogluconic acid in the fermentation broth is determined by optical polarimetry: the content of ketogluconic acid in the fermentation broth = the absolute value of the optical rotation of the fermentation broth at 25° C./0.88.
荧光假单胞菌(Pseudomonas fluorescens)K1005的发酵液中酮基葡萄糖酸含量为13.4g/L,重组菌的产量为16g/L,提高了大约19%,phbCAB基因的导入,有利于提高菌的的耐受力,生长得更好,从而得到更高的转化率。The content of ketogluconic acid in the fermentation broth of Pseudomonas fluorescens (Pseudomonas fluorescens) K1005 is 13.4g/L, and the output of the recombinant bacteria is 16g/L, which has increased by about 19%. Tolerance, better growth, resulting in higher conversion rates.
实施例12、在枯草芽孢杆菌中表达phbCAB基因影响α-淀粉酶合成Example 12, the expression of phbCAB gene in Bacillus subtilis affects the synthesis of α-amylase
菌种:枯草芽孢杆菌(Bacillus subtilis)ATCC 21556。Bacterial species: Bacillus subtilis ATCC 21556.
种子培养基成分为(300mL):葡萄糖1g,牛肉膏1g,蛋白胨1g,NaCl 1g,KH2PO4 1g,淀粉1g,pH 7.0。The composition of the seed medium is (300 mL): 1 g of glucose, 1 g of beef extract, 1 g of peptone, 1 g of NaCl, 1 g of KH 2 PO 4 , 1 g of starch, and pH 7.0.
发酵培养基成分为(200mL):牛肉膏1g,蛋白胨1g,NaCl 1g,KH2PO4 1g,NaH2PO41g,淀粉3g。The components of the fermentation medium are (200 mL): 1 g of beef extract, 1 g of peptone, 1 g of NaCl, 1 g of KH 2 PO 4 , 1 g of NaH 2 PO 4 , and 3 g of starch.
将按照实施例1方法获得的质粒pEUHB乙酸锂转化的方法转入到枯草芽孢杆菌(Bacillus subtilis)ATCC 21556中获得重组菌(含有pEUHB的枯草芽孢杆菌(Bacillussubtilis)ATCC 21556)进行发酵实验。The method of lithium acetate transformation of the plasmid pEUHB obtained according to the method of Example 1 was transferred into Bacillus subtilis (Bacillus subtilis) ATCC 21556 to obtain recombinant bacteria (Bacillus subtilis (Bacillus subtilis) ATCC 21556 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的枯草芽孢杆菌(Bacillus subtilis)ATCC 21556和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在32℃、200rpm下培养12小时后,以10%(v/v)接种量接入发酵培养基(50mL/500mL锥形瓶),32℃,200rpm培养72小时,测定α-淀粉酶酶活力。酶活力测定:取5mL发酵液,4000g离心15分钟,取上清与5-乙缩醛-麦芽庚糖-对-硝基苯反应,酶活力单位定义为:37℃,1分钟分解1μmol淀粉为葡萄糖即为1个酶活单位。Bacillus subtilis (Bacillus subtilis) ATCC 21556 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), cultivated at 32°C and 200rpm for 12 hours, then added with 10% ( v/v) The inoculum was transferred into the fermentation medium (50 mL/500 mL Erlenmeyer flask), cultured at 32° C. and 200 rpm for 72 hours, and the enzyme activity of α-amylase was measured. Determination of enzyme activity: take 5mL of fermentation broth, centrifuge at 4000g for 15 minutes, take the supernatant and react with 5-acetal-maltoheptose-p-nitrobenzene, the enzyme activity unit is defined as: 1 μmol starch decomposed in 1 minute at 37°C is Glucose is 1 enzyme activity unit.
结果表明枯草芽孢杆菌(Bacillus subtilis)ATCC 21556的发酵液中酶活为67U/L,而重组菌酶活为76U/L。重组菌的发酵液中有更高的淀粉酶活力,这可能是因为phbCAB基因导致细胞内的代谢途径发生变化,使其倾向于有利于细胞生长的方向,提高了细胞利用淀粉作为碳源的能力,即是增加了细胞的淀粉酶产率。The results showed that the enzyme activity in the fermentation broth of Bacillus subtilis ATCC 21556 was 67U/L, while that of the recombinant bacteria was 76U/L. The fermentation broth of the recombinant bacteria has higher amylase activity, which may be because the phbCAB gene leads to changes in the metabolic pathways in the cells, which tends to favor the direction of cell growth and improves the ability of cells to use starch as a carbon source , which increases the amylase production rate of the cells.
实施例13、在酿酒酵母中表达phbCAB基因影响酒精产量Example 13. Expression of phbCAB gene in Saccharomyces cerevisiae affects alcohol production
菌种:酿酒酵母(Saccharomyces cerevisiae)ACCC 2063。Strains: Saccharomyces cerevisiae ACCC 2063.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到酿酒酵母(Saccharomyces cerevisiae)ACCC 2063中获得重组菌(含有pPICHB的酿酒酵母(Saccharomyces cerevisiae)ACCC 2063)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Saccharomyces cerevisiae ACCC 2063 by lithium acetate transformation to obtain recombinant bacteria (Saccharomyces cerevisiae ACCC 2063 containing pPICHB) for fermentation experiments.
固体培养基配制:量取5Bx麦汁200mL放入500mL烧杯中,在沸腾状态下加入4g琼脂,不断搅拌直至完全融化,分装于试管中高压灭菌,然后放斜面;液体培养基配制:量取5Bx麦汁110mL装入250mL三角瓶中,调pH4.8-5.0,然后高压灭菌;发酵培养基配制:称淀粉300g倒入1200mL 40℃温水中,搅拌均匀,加入0.2%氯化钙,调节pH6.0-6.2,称取液化酶1g,于90℃-93℃温度下液化30分钟,直至加入碘液不变色,液化结束后将其迅速冷却到58℃-60℃,并调pH值为4.4-4.6,加入1mL糖化酶(十万单位)进行糖化,在淀粉水解液的糖度在23Bx时停止,加入2%的玉米浆,并煮沸1小时,冷却过滤,然后调pH到4.8-5.0,灭菌待用。发酵时按10%(v/v)的接种量接入到发酵培养基中,30℃保温发酵72小时。乙醇浓度用高效液相色谱测量:发酵液8000g离心十分钟,取上清过滤后作为样品;色谱柱为Beckman公司L2Spherogel配合基交换柱,流动相为98%的浓硫酸∶H2O(体积比为0.5∶1000),流速1mL/min。Preparation of solid medium: Measure 200mL of 5Bx wort into a 500mL beaker, add 4g of agar in a boiling state, stir continuously until it is completely melted, put it in a test tube for autoclaving, and then put it on a slope; preparation of liquid medium: measure Take 110mL of 5Bx wort and put it into a 250mL Erlenmeyer flask, adjust the pH to 4.8-5.0, and then autoclave; preparation of fermentation medium: weigh 300g of starch and pour it into 1200mL of warm water at 40°C, stir evenly, add 0.2% calcium chloride, Adjust the pH to 6.0-6.2, weigh 1g of liquefied enzyme, and liquefy at 90°C-93°C for 30 minutes until the iodine solution does not change color. After liquefaction, quickly cool it to 58°C-60°C and adjust the pH value 4.4-4.6, add 1mL glucoamylase (100,000 units) for saccharification, stop when the sugar content of the starch hydrolyzate is 23Bx, add 2% corn steep liquor, boil for 1 hour, cool and filter, then adjust the pH to 4.8-5.0 , sterilized for use. During fermentation, the inoculation amount of 10% (v/v) is inserted into the fermentation medium, and the fermentation is incubated at 30° C. for 72 hours. The ethanol concentration is measured by high-performance liquid chromatography: the fermentation broth is centrifuged at 8000g for ten minutes, and the supernatant is filtered as a sample; the chromatographic column is a Beckman L2Spherogel ligand exchange column, and the mobile phase is 98% concentrated sulfuric acid: H 2 O (volume ratio 0.5:1000), flow rate 1mL/min.
结果表明酿酒酵母(Saccharomyces cerevisiae)ACCC 2063发酵液乙醇浓度为15%,而重组酵母的乙醇浓度为20%,提高了33%,phbCAB基因的引入,不仅可以改变细胞内的代谢流,而且PHA的合成能够提高重组酵母对高乙醇环境的耐受性,从而提高了乙醇的产量。The results showed that the ethanol concentration of Saccharomyces cerevisiae (Saccharomyces cerevisiae) ACCC 2063 fermentation liquid was 15%, while the ethanol concentration of recombinant yeast was 20%, which increased by 33%. Synthesis can improve the tolerance of recombinant yeast to high ethanol environment, thereby increasing the production of ethanol.
实施例14、在克鲁斯假丝酵母中表达phbCAB基因影响甘油产量Example 14. Expression of phbCAB gene in Candida krusei affects glycerol production
菌种:克鲁斯假丝酵母(Candida krusei)ACCC 2196。Species: Candida krusei ACCC 2196.
斜面培养基成分为:葡萄糖50g/L,酵母膏20g/L,碳酸钙5g/L,琼脂20g/L。The composition of the slant medium is: glucose 50g/L, yeast extract 20g/L, calcium carbonate 5g/L, agar 20g/L.
种子培养基成分为:葡萄糖200g/L,尿素2g/L,玉米浆7g/L。The composition of the seed medium is: glucose 200g/L, urea 2g/L, corn steep liquor 7g/L.
发酵培养基成分为:葡萄糖200g/L,尿素2g/L,玉米浆6g/L。The composition of the fermentation medium is: glucose 200g/L, urea 2g/L, corn steep liquor 6g/L.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到克鲁斯假丝酵母(Candida krusei)ACCC 2196中获得重组菌(含有pPICHB的克鲁斯假丝酵母(Candidakrusei)ACCC 2196)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Candida krusei (Candida krusei) ACCC 2196 with lithium acetate to obtain recombinant bacteria (Candida krusei (Candidakrusei) ACCC 2196 containing pPICHB) ) for fermentation experiments.
分别取培养在新鲜斜面上的克鲁斯假丝酵母(Candida krusei)ACCC 2196和重组菌分别接种到种子培养基(40mL/500mL锥形瓶),在30℃、230rpm下培养12小时后,以10%(v/v)接种量接入发酵培养基,7.5L发酵罐装液量3L,自动控制pH 5.5,温度30℃,通气量0.5L/min,搅拌转速450rpm,残糖接近0时停止发酵,测定发酵液中甘油含量。发酵液中甘油含量用高效液相色谱检测:发酵液8000g离心十分钟,取上清过滤后作为样品;色谱柱为Beckman公司L2Spherogel配合基交换柱,流动相为98%的浓硫酸∶H2O(体积比为0.5∶1000),流速1mL/min。Candida krusei (Candida krusei) ACCC 2196 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (40mL/500mL Erlenmeyer flask), cultivated at 30°C and 230rpm for 12 hours, then 10% (v/v) inoculum amount is inserted into the fermentation medium, the liquid volume of the 7.5L fermentation tank is 3L, the pH is automatically controlled to 5.5, the temperature is 30°C, the ventilation rate is 0.5L/min, the stirring speed is 450rpm, and the residual sugar is close to 0. Stop Fermentation, determination of glycerol content in fermentation broth. The glycerol content in the fermentation broth was detected by high performance liquid chromatography: the fermentation broth was centrifuged at 8000 g for ten minutes, and the supernatant was taken as a sample after filtration; the chromatographic column was L2Spherogel ligand exchange column of Beckman Company, and the mobile phase was 98% concentrated sulfuric acid: H 2 O (The volume ratio is 0.5:1000), the flow rate is 1mL/min.
结果表明克鲁斯假丝酵母(Candida krusei)ACCC 2196最终甘油浓度为62g/L,而重组菌为75g/L,提高了21%。在发酵过程中,有相当部分的碳源会流向乙醇合成,这降低了甘油的得率。乙醇途径是为细胞提供氧化力的一条途径,phbCAB基因得引入,能够降低乙醇途径的压力,促进糖酵解,使更多的碳源流向甘油合成,增加了甘油的得率。The results showed that the final glycerol concentration of Candida krusei (Candida krusei) ACCC 2196 was 62g/L, while that of the recombinant strain was 75g/L, an increase of 21%. During the fermentation process, a considerable part of the carbon source will flow to ethanol synthesis, which reduces the yield of glycerol. The ethanol pathway is a pathway that provides oxidative power for cells. The introduction of the phbCAB gene can reduce the pressure on the ethanol pathway, promote glycolysis, and allow more carbon sources to flow to glycerol synthesis, increasing the yield of glycerol.
实施例15、在热带假丝酵母中表达phbCAB基因影响十二碳二元酸的合成Example 15, the expression of phbCAB gene in Candida tropicalis affects the synthesis of dodecanedioic acid
菌种:热带假丝酵母(Candida tropicalis)UH22248(任刚,陈远童,十二碳二元酸的发酵研究,生物工程学报,2000,16:198-202)。Strain: Candida tropicalis UH22248 (Ren Gang, Chen Yuantong, Research on the fermentation of dodecane dibasic acid, Chinese Journal of Bioengineering, 2000, 16: 198-202).
斜面培养基成分为:10Bx的麦芽汁,1.5%琼脂粉。The components of the slant medium are: 10Bx wort juice, 1.5% agar powder.
种子培养基成分为:酵母膏5g,玉米浆3g,蔗糖5g,KH2PO4 8g,加水定容至1L灭菌,接种时再加入尿素0.3%,重腊5%。The composition of the seed medium is: 5g of yeast extract, 3g of corn steep liquor, 5g of sucrose, 8g of KH 2 PO 4 , add water to 1L for sterilization, add 0.3% urea and 5% heavy wax when inoculating.
发酵培养基为:酵母膏2g,玉米浆1g,蔗糖2g,KH2PO4 8g,NaCl 1g,加水定容至100mL灭菌,接种时再加正十二烷20%,尿素0.12%,重腊3.3%,pH 7.3。The fermentation medium is: yeast extract 2g, corn steep liquor 1g, sucrose 2g, KH 2 PO 4 8g, NaCl 1g, add water to 100mL for sterilization, add n-dodecane 20%, urea 0.12%, heavy wax 3.3%, pH 7.3.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到热带假丝酵母(Candida tropicalis)UH22248中获得重组菌(含有pPICHB的热带假丝酵母(Candidatropicalis)UH22248)进行发酵实验。The plasmid pPICHB obtained according to the method in Example 2 was transformed into Candida tropicalis UH22248 by lithium acetate transformation to obtain recombinant bacteria (Candida tropicalis UH22248 containing pPICHB) for fermentation experiments.
将斜面培养48小时的热带假丝酵母(Candida tropicalis)UH22248和重组菌分别接种到种子培养基中(100mL/500mL摇瓶),在30℃、180rpm下培养48小时后,接种3mL到100mL发酵培养基中,30℃、180rpm培养4天,发酵结束。取15ml发酵液,用6mol/LHCl调pH值到3.0,加入120mL乙醚,摇动100次,放置30分钟,然后倒出40mL乙醚提取液,通风橱中风干得到白色固体,然后将其用95%的中性热乙醇溶解,加入一滴酚酞,用标准NaOH溶液滴定,记录所用的NaOH,计算十二碳二元酸产量。Inoculate Candida tropicalis UH22248 and recombinant strains cultured on a slant for 48 hours into the seed medium (100mL/500mL shake flask), and after culturing at 30°C and 180rpm for 48 hours, inoculate 3mL to 100mL of fermentation culture culture medium at 30°C and 180rpm for 4 days, and the fermentation ended. Take 15ml of fermentation broth, adjust the pH value to 3.0 with 6mol/L HCl, add 120mL of ether, shake 100 times, let it stand for 30 minutes, then pour out 40mL of ether extract, air-dry in a fume hood to obtain a white solid, and then use 95% Dissolve in neutral hot ethanol, add a drop of phenolphthalein, titrate with standard NaOH solution, record the NaOH used, and calculate the yield of dodecanedioic acid.
结果表明重组菌(十二碳二元酸产量为92g/L)显示出了比热带假丝酵母(Candidatropicalis)UH22248(十二碳二元酸产量为78g/L)更高的十二碳二元酸产量,发酵液比较粘稠,细胞处于一种低溶氧水平的环境,phbCAB基因的引入能够在这种条件下为细胞提供氧化力,同时其可能也对脂肪酸氧化途径有抑制作用,从而增加了发酵液中的二元酸产量。The results showed that the recombinant bacteria (dodecanedioic acid production of 92g/L) showed higher dodecanedioic acid production than Candida tropicalis (Candidatropicalis) UH22248 (dodecanedioic acid production of 78g/L). acid production, the fermentation broth is relatively viscous, and the cells are in an environment with a low dissolved oxygen level. The introduction of the phbCAB gene can provide the cells with oxidative power under such conditions, and it may also inhibit the fatty acid oxidation pathway, thereby increasing The production of dibasic acids in the fermentation broth.
实施例16、在热带假丝酵母中表达phbCAB基因影响十五碳二元酸的合成Example 16, the expression of phbCAB gene in Candida tropicalis affects the synthesis of pentadecanedioic acid
菌种:热带假丝酵母(Candida tropicalis)T25-14(陈远童,郝秀珍,庞月川,十五碳二元酸的发酵研究,微生物学报,1995,35:433-437)。Species: Candida tropicalis T 25-14 (Chen Yuantong, Hao Xiuzhen, Pang Yuechuan, Research on the fermentation of pentacarbon dibasic acid, Acta Microbiology, 1995, 35: 433-437).
斜面培养基成分为:10Bx的麦芽汁,1.5%琼脂粉。The components of the slant medium are: 10Bx wort juice, 1.5% agar powder.
种子培养基成分为:酵母膏5g/L,玉米浆3g/L,蔗糖5g/L,KH2PO4 8g/L配好灭菌,接种时再加入尿素0.3%,重腊5%。The composition of the seed medium is: yeast extract 5g/L, corn steep liquor 3g/L, sucrose 5g/L, KH 2 PO 4 8g/L for sterilization, and then add 0.3% urea and 5% heavy wax when inoculating.
发酵培养基为:酵母膏2g/L,玉米浆1g/L,蔗糖1g/L,KH2PO4 8g/L,NaCl 1g/L 加水定容至100mL灭菌,接种时再加正十五烷20%,尿素0.12%,pH 7.5。The fermentation medium is: yeast extract 2g/L, corn steep liquor 1g/L, sucrose 1g/L, KH 2 PO 4 8g/L, NaCl 1g/L, add water to 100mL for sterilization, add n-pentadecane when inoculating 20%, urea 0.12%, pH 7.5.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化的方法转入到热带假丝酵母(Candida tropicalis)T25-14中获得重组菌(含有pPICHB的热带假丝酵母(Candidatropicalis)T25-14)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Candida tropicalis (Candida tropicalis) T 25-14 by the method of lithium acetate transformation to obtain recombinant bacteria (Candida tropicalis (Candida tropicalis) T 25-14 containing pPICHB ) for fermentation experiments.
将斜面培养48小时的热带假丝酵母(Candida tropicalis)T25-14和重组菌的种子分别接种到种子培养基中(50mL/500mL摇瓶),在30℃、220rpm下培养48小时后,5%(v/v)接种量接种到发酵培养基中(50mL/500mL摇瓶),30℃、220rpm培养72小时。取15ml发酵液,用6mol/l HCl调pH值到3.0,加入120ml乙醚混匀,放置直到分层,除去水层,放出乙醚提取液,通风橱中风干得到白色固体,然后将其用95%的中性热乙醇溶解,加入一滴酚酞,用标准NaOH溶液滴定,记录所用的NaOH,计算二元酸产量。The seeds of Candida tropicalis T 25-14 and recombinant strains cultured on the slant for 48 hours were respectively inoculated into the seed medium (50 mL/500 mL shake flask), and after culturing at 30 °C and 220 rpm for 48 hours, 5 The % (v/v) inoculum was inoculated into the fermentation medium (50 mL/500 mL shake flask), and cultured at 30° C. and 220 rpm for 72 hours. Take 15ml of fermented liquid, adjust the pH value to 3.0 with 6mol/l HCl, add 120ml of diethyl ether and mix evenly, place until the layers are separated, remove the water layer, release the diethyl ether extract, air-dry in a fume hood to obtain a white solid, and then use 95% Dissolve in neutral hot ethanol, add a drop of phenolphthalein, titrate with standard NaOH solution, record the NaOH used, and calculate the yield of dibasic acid.
结果表明热带假丝酵母(Candida tropicalis)T25-14的二元酸产量为36g/L,重组菌为43g/L,提高了19%。重组菌发酵液比较粘稠,细胞处于一种低溶氧水平的环境,phbCAB基因的引入能够在这种条件下为细胞提供氧化力,同时其可能也对脂肪酸氧化途径有抑制作用,从而增加了发酵液中的二元酸产量。The results showed that the dibasic acid production of Candida tropicalis T 25-14 was 36g/L, and that of the recombinant strain was 43g/L, which was increased by 19%. The fermentation broth of the recombinant bacteria is relatively viscous, and the cells are in an environment with a low dissolved oxygen level. The introduction of the phbCAB gene can provide the cells with oxidative power under this condition, and it may also inhibit the fatty acid oxidation pathway, thereby increasing the Dibasic acid production in fermentation broth.
实施例17、在苏云金芽孢杆菌中表达phbCAB基因对芽孢形成的影响Embodiment 17, the influence of expressing phbCAB gene on spore formation in Bacillus thuringiensis
菌种:苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068。Bacteria: Bacillus thuringiensis ACCC 10068.
将按照实施例1方法获得的质粒pEUHB以电转化的方法转入到苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068中获得重组菌(含有pEUHB的苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transferred into Bacillus thuringiensis ACCC 10068 by electrotransformation to obtain recombinant bacteria (Bacillus thuringiensis ACCC 10068 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068和重组菌,分别接种到种子培养基(50mL/500mL锥形瓶),在25℃、220rpm下培养12小时后,以1%(v/v)接种量接入发酵培养基(50mL/500mL锥形瓶),25℃,220rpm发酵36小时。培养基成分均为:牛肉膏0.3%,蛋白胨0.5%,pH 7.2。发酵后用血球计数板计量孢子含量。Bacillus thuringiensis (Bacillus thuringiensis) ACCC 10068 and recombinant bacteria cultured on fresh slopes were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), cultivated at 25°C and 220rpm for 12 hours, and added with 1% (v/v) The inoculum was transferred into the fermentation medium (50mL/500mL Erlenmeyer flask), and fermented at 25°C and 220rpm for 36 hours. The medium components are: beef extract 0.3%, peptone 0.5%, pH 7.2. After fermentation, the spore content was measured with a hemocytometer.
通过显微镜观测可以看到,重组菌的菌体量(10.2*109个/ml)以及孢子数(1.5*109个/ml)都高于苏云金芽孢杆菌(Bacillus thuringiensis)ACCC 10068(菌体量9.1*109个/ml,孢子数1.1*109个/ml)。发酵实验表明高溶氧是有利于孢子形成的。phbCAB基因的引入,能够促进孢子形成。It can be seen by microscopic observation that the bacterial volume (10.2*10 9 /ml) and spore number (1.5*10 9 /ml) of the recombinant bacteria are higher than those of Bacillus thuringiensis ACCC 10068 (bacterial volume 9.1*10 9 /ml, the number of spores is 1.1*10 9 /ml). Fermentation experiments showed that high dissolved oxygen was beneficial to spore formation. The introduction of phbCAB gene can promote sporulation.
实施例18、在枯草芽孢杆菌中表达phbCAB影响鸟苷合成Example 18. Expression of phbCAB in Bacillus subtilis affects guanosine synthesis
菌种:枯草芽孢杆菌(Bacillus subtilis)ATCC 19220。Bacterial species: Bacillus subtilis ATCC 19220.
种子培养基成分为葡萄糖20g/L,酵母粉10g/L,蛋白胨10g/L,玉米液10g/L,氯化钠5g/L,尿素2g/L,味精5g/L,pH 7.0-7.2。The composition of the seed medium is glucose 20g/L, yeast powder 10g/L, peptone 10g/L, corn liquid 10g/L, sodium chloride 5g/L, urea 2g/L, monosodium glutamate 5g/L, pH 7.0-7.2.
发酵培养基成分为葡萄糖120g/L,豆饼水解液50g/L,酵母粉16g/L,硫酸铵15g/L,七水硫酸镁4g/L,磷酸氢二钾2g/L,味精10g/L,碳酸钙2g/L,pH 7.0-7.2。The composition of the fermentation medium is glucose 120g/L, soybean cake hydrolyzate 50g/L, yeast powder 16g/L, ammonium sulfate 15g/L, magnesium sulfate heptahydrate 4g/L, dipotassium hydrogen phosphate 2g/L, monosodium glutamate 10g/L, Calcium carbonate 2g/L, pH 7.0-7.2.
将按照实施例1方法获得的质粒pEUHB通过乙酸锂转化的方法转入到枯草芽孢杆菌(Bacillus subtilis)ATCC 19220中获得重组菌(含有pEUHB的枯草芽孢杆菌(Bacillussubtilis)ATCC 19220)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transformed into Bacillus subtilis (Bacillus subtilis) ATCC 19220 by the method of lithium acetate transformation to obtain recombinant bacteria (Bacillus subtilis (Bacillus subtilis) ATCC 19220 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的枯草芽孢杆菌(Bacillus subtilis)ATCC 19220和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在36℃、140rpm下培养10小时后,以10%(v/v)接种量接入发酵培养基(50mL/500mL锥形瓶),36℃、220rpm下培养60小时,测定鸟苷含量。鸟苷含量用HPLC测定,流动相为0.5%磷酸氢二钾,流速1.2mL/min,色谱柱为Hypersil ODS C18反相柱,检测波长为254nm。Bacillus subtilis (Bacillus subtilis) ATCC 19220 and recombinant bacteria cultured on fresh slant were inoculated into seed medium (50mL/500mL conical flask) respectively, cultivated at 36°C and 140rpm for 10 hours, then added with 10% ( v/v) The inoculum was transferred into the fermentation medium (50 mL/500 mL Erlenmeyer flask), cultured at 36° C. and 220 rpm for 60 hours, and the content of guanosine was determined. The content of guanosine was determined by HPLC, the mobile phase was 0.5% dipotassium hydrogen phosphate, the flow rate was 1.2mL/min, the chromatographic column was a Hypersil ODS C18 reverse-phase column, and the detection wavelength was 254nm.
结果表明枯草芽孢杆菌(Bacillus subtilis)ATCC 19220鸟苷产量为16g/L,重组菌的产量为20g/L,提高了25%。在细胞内代谢途径中,为鸟苷合成提供前体的单磷酸己糖途径会消耗大量的NADP,高的NADP/NADPH水平能够有效的促进鸟苷的合成。phbCAB基因的引入,正能实现这一要求,因此能够显著的提高鸟苷的产量。The results showed that the yield of Bacillus subtilis (Bacillus subtilis) ATCC 19220 guanosine was 16g/L, and the yield of the recombinant strain was 20g/L, which increased by 25%. In the intracellular metabolic pathway, the hexose monophosphate pathway that provides precursors for guanosine synthesis consumes a large amount of NADP, and high NADP/NADPH levels can effectively promote the synthesis of guanosine. The introduction of the phbCAB gene can fulfill this requirement, thus significantly increasing the production of guanosine.
实施例19、在酿酒酵母中表达phbCAB基因影响谷胱甘肽产量Example 19. Expression of phbCAB gene in Saccharomyces cerevisiae affects glutathione production
菌种:酿酒酵母(Saccharomyces cerevisiae)KY6186(Sakato K,Tanaka H.Advancedcontrol of glutathione fermentation process.Biotechnol Bioeng,1992,40:904-912)。Strain: Saccharomyces cerevisiae KY6186 (Sakato K, Tanaka H. Advanced control of glutathione fermentation process. Biotechnol Bioeng, 1992, 40: 904-912).
斜面培养基成分为:麦芽汁10g/L,酵母粉3g/L,蛋白胨5g/L,葡萄糖10g/L,琼脂20g/L,pH 7.0-7.2。The composition of the slant medium is: wort juice 10g/L, yeast powder 3g/L, peptone 5g/L, glucose 10g/L, agar 20g/L, pH 7.0-7.2.
种子培养基成分为:葡萄糖30g/L,酵母粉6g/L,磷酸氢二铵3g/L,硫酸镁0.8g/L,磷酸氢二钾1g/L,磷酸二氢钾1g/L,pH 7.0-7.2。The composition of the seed medium is: glucose 30g/L, yeast powder 6g/L, diammonium hydrogen phosphate 3g/L, magnesium sulfate 0.8g/L, dipotassium hydrogen phosphate 1g/L, potassium dihydrogen phosphate 1g/L, pH 7.0 -7.2.
发酵培养基为:葡萄糖70g/L,酵母粉15g/L,麦汁60g/L,磷酸氢二铵10g/L,硫酸镁5g/L,蜜糖28g/L,玉米浆16g/L,磷酸氢二钾1g/L,磷酸二氢钾1g/L,ZnCl2 10mg/L,FeCl2 6mg/L,CuCl2 6mg/L,MnCl2 6mg/L,pH 7.0-7.2。The fermentation medium is: glucose 70g/L, yeast powder 15g/L, wort 60g/L, diammonium hydrogen phosphate 10g/L, magnesium sulfate 5g/L, honey 28g/L, corn steep liquor 16g/L, hydrogen phosphate Dipotassium 1g/L, potassium dihydrogen phosphate 1g/L, ZnCl 2 10mg/L, FeCl 2 6mg/L, CuCl 2 6mg/L, MnCl 2 6mg/L, pH 7.0-7.2.
将按照实施例2方法获得的质粒pPICHB以乙酸锂转化转入到酿酒酵母(Saccharomyces cerevisiae)KY6186中获得重组菌(含有的酿酒酵母(Saccharomycescerevisiae)KY6186)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transformed into Saccharomyces cerevisiae (Saccharomyces cerevisiae) KY6186 with lithium acetate to obtain recombinant bacteria (containing Saccharomyces cerevisiae (Saccharomyces cerevisiae) KY6186) for fermentation experiments.
分别取培养在新鲜斜面上的酿酒酵母(Saccharomyces cerevisiae)KY6186和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、180rpm下培养24小时后,以10%(v/v)接种量接入发酵培养基,7.5L发酵罐中装液量3L发酵,自动控制温度30℃,pH 5.4,通气量2L/min,前两小时转速200rpm,之后每小时升高100rpm,直到600rpm,维持到发酵结束,36小时停止发酵。取发酵得到的新鲜酵母用蒸馏水洗三次后,在40%的乙醇中,30℃萃取2小时,3000g离心,取上清用ALLOXAN法(上海市医药化验所临床生化检验(上册),上海,上海科学与技术出版社,1979)测定谷胱甘肽含量。Saccharomyces cerevisiae (Saccharomyces cerevisiae) KY6186 and recombinant bacteria cultured on fresh slopes were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively, cultivated at 30°C and 180rpm for 24 hours, and then inoculated with 10% (v/ v) The inoculation amount is connected to the fermentation medium, the liquid volume in the 7.5L fermenter is 3L for fermentation, the temperature is automatically controlled at 30°C, the pH is 5.4, the ventilation rate is 2L/min, the speed is 200rpm for the first two hours, and then increased by 100rpm per hour until 600rpm, maintained until the end of fermentation, 36 hours to stop fermentation. Get the fresh yeast obtained by fermentation and wash it three times with distilled water, in 40% ethanol, extract for 2 hours at 30°C, centrifuge at 3000g, get the supernatant and use the ALLOXAN method (Shanghai Pharmaceutical Laboratory Clinical Biochemical Test (Volume 1), Shanghai, Shanghai) Science and Technology Press, 1979) Determination of glutathione content.
结果表明酿酒酵母(Saccharomyces cerevisiae)KY6186发酵液谷胱甘肽浓度为1.3 g/L,而重组菌的谷胱甘肽浓度为1.6g/L,提高了23%。研究表明乙醇合成的降低有利于谷胱甘肽的合成,而乙醇合成是一个消耗还原力,获得氧化力的过程,phbCAB基因的引入可以抑制乙醇的合成,提高谷胱甘肽产量。The results showed that the glutathione concentration of Saccharomyces cerevisiae (Saccharomyces cerevisiae) KY6186 fermentation liquid was 1.3 g/L, while the glutathione concentration of the recombinant bacteria was 1.6 g/L, which increased by 23%. Studies have shown that the reduction of ethanol synthesis is beneficial to the synthesis of glutathione, and ethanol synthesis is a process of consuming reducing power and gaining oxidative power. The introduction of phbCAB gene can inhibit the synthesis of ethanol and increase the production of glutathione.
实施例20、在球拟酵母中表达phbCAB基因对赤藓糖醇产量的影响Example 20, Effect of expressing phbCAB gene on erythritol production in Torulopsis sphaeroides
菌种:球拟酵母(ToruLopsis sp)B845(吴燕,杨晓伟,陆茂林,赤藓糖醇产生菌B845的形态,生理特征,生物技术,2002,12:20-21)。Bacterial species: ToruLopsis sp B845 (Wu Yan, Yang Xiaowei, Lu Maolin, Morphology and physiological characteristics of erythritol-producing strain B845, Biotechnology, 2002, 12: 20-21).
斜面培养基成分为:葡萄糖10%,酵母膏1%,脲0.1%,琼脂2%,pH 7.0-7.2。The composition of the slant medium is: glucose 10%, yeast extract 1%, urea 0.1%, agar 2%, pH 7.0-7.2.
种子和发酵培养基为:葡萄糖20%,酵母膏0.5%,脲0.1%,pH 7.0-7.2。The seeds and fermentation medium are: glucose 20%, yeast extract 0.5%, urea 0.1%, pH 7.0-7.2.
将按照实施例2方法获得的质粒pPICHB以电转化的方法转入到球拟酵母(ToruLopsis sp)B845中获得重组菌(含有pPICHB的球拟酵母(ToruLopsis sp)B845)进行发酵实验。The plasmid pPICHB obtained according to the method of Example 2 was transferred into ToruLopsis sp B845 by electrotransformation to obtain recombinant bacteria (ToruLopsis sp B845 containing pPICHB) for fermentation experiments.
分别取培养在新鲜斜面上的球拟酵母(ToruLopsis sp)B845和重组菌分别接种到种子培养基(40mL/500mL锥形瓶),在30℃、180rpm下培养3天后,以5%(v/v)接种量接入发酵培养基中(50mL/500mL锥形瓶),30℃、180rpm下培养3天,测定赤藓醇的产量。赤藓糖醇产量用高碘酸氧化法测量(原野,应向贤,范光先,诸葛健,高碘酸氧化法直接测定发酵液中赤藓糖醇,无锡轻工大学学报,2000,19:72-75)。结果表明球拟酵母(ToruLopsis sp)B845的赤藓糖醇产量为50g/L,重组菌为55g/L,提高在10%左右,作为赤藓糖醇生产菌,需要有良好的耐高渗能力和代谢碳源能力,而phbCAB基因的引入,导致胞内PHA的合成,是有利于提高上述能力的,因此对赤藓糖醇的合成也有一定的促进作用。ToruLopsis sp B845 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (40mL/500mL Erlenmeyer flask), cultured at 30°C and 180rpm for 3 days, then added with 5% (v/ v) The inoculum was transferred into the fermentation medium (50 mL/500 mL Erlenmeyer flask), cultured at 30° C. and 180 rpm for 3 days, and the production of erythritol was measured. Erythritol production is measured by periodic acid oxidation method (Yuan Ye, Ying Xiangxian, Fan Guangxian, Zhuge Jian, direct determination of erythritol in fermentation broth by periodic acid oxidation method, Journal of Wuxi Light Industry University, 2000, 19: 72 -75). The results show that the erythritol yield of ToruLopsis sp B845 is 50g/L, and that of recombinant bacteria is 55g/L, which is about 10% higher. As an erythritol-producing bacterium, good hypertonic resistance is required and metabolic carbon source ability, and the introduction of phbCAB gene leads to the synthesis of intracellular PHA, which is conducive to improving the above-mentioned ability, so it also has a certain promotion effect on the synthesis of erythritol.
实施例21、在短小芽孢杆菌中表达phbCAB基因影响D-核糖产量Example 21. Expression of phbCAB gene in Bacillus pumilus affects D-ribose production
菌种:短小芽孢杆菌(Bacillus pumilus)ATCC 31095。Bacterial species: Bacillus pumilus ATCC 31095.
种子培养基成分为:葡萄糖20g/L,玉米浆26g/L,磷酸氢二钾0.03g/L,磷酸二氢钾0.01g/L,pH 6.7。The composition of the seed medium is: glucose 20g/L, corn steep liquor 26g/L, dipotassium hydrogen phosphate 0.03g/L, potassium dihydrogen phosphate 0.01g/L, pH 6.7.
发酵培养基成分为:葡萄糖180g/L,玉米浆28g/L,硫酸铵13g/L,硫酸锰0.05g/L,pH 7.0。The composition of the fermentation medium is: glucose 180g/L, corn steep liquor 28g/L, ammonium sulfate 13g/L, manganese sulfate 0.05g/L, pH 7.0.
将按照实施例1方法获得的质粒pEUHB以乙酸锂转化的方法转入到短小芽孢杆菌(Bacillus pumilus)ATCC 31095中获得重组菌(含有pEUHB的短小芽孢杆菌(Bacilluspumilus)ATCC 31095)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transformed into Bacillus pumilus ATCC 31095 by lithium acetate transformation to obtain recombinant bacteria (Bacillus pumilus ATCC 31095 containing pEUHB) for fermentation experiments.
分别取培养在新鲜斜面上的短小芽孢杆菌(Bacillus pumilus)ATCC 31095和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在37℃、180rpm下培养18-20小时,以10%(v/v)的接种量接入到发酵培养基中。7.5L发酵罐装液量3L,控制温度37℃,通气量3L/min,搅拌速度650rpm,发酵72小时,测定发酵液中的D-核糖含量。D-核糖用地衣酚法测量:发酵液5000g离心10分钟,上清用蒸馏水稀释,使核糖量控制在10-90 g/3mL范围内;取3mL稀释液,依次加入0.1%氯化铁浓盐酸溶液3mL,0.1%地衣酚乙醇溶液0.3mL,摇匀,沸水浴40分钟,自来水冷却后在60分钟内测量670nm吸光度值,通过标准曲线计算核糖浓度。结果表明短小芽孢杆菌(Bacillus pumilus)ATCC 31095的核糖浓度为55g/L,而重组菌可以达到72g/L,上升了31%。细胞内核糖的合成是通过磷酸戊糖途径,这个途径消耗大量的细胞内氧化力,而通过增加溶氧满足细胞的代谢需求会促进孢子的形成,这不利于通过细胞营养生长生产核糖,因此phbCAB基因的引入,能从内源的途径为细胞提供一定的氧化力NADPH,从而有利于核糖的合成。Bacillus pumilus (Bacillus pumilus) ATCC 31095 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), cultivated at 37°C and 180rpm for 18-20 hours, with 10% The inoculum size of (v/v) was inserted into the fermentation medium. A 7.5L fermentation tank was filled with 3L of liquid, controlled temperature at 37°C, ventilation at 3L/min, stirring speed at 650rpm, and fermented for 72 hours to measure the D-ribose content in the fermentation broth. D-ribose is measured by the orcinol method: the fermentation broth is centrifuged at 5000g for 10 minutes, and the supernatant is diluted with distilled water to control the amount of ribose within the range of 10-90 g/3mL; take 3mL of the diluted solution and add 0.1% ferric chloride concentrated hydrochloric acid in turn Solution 3mL, 0.1% orcinol ethanol solution 0.3mL, shake well, bathe in boiling water for 40 minutes, measure the absorbance value at 670nm within 60 minutes after cooling with tap water, and calculate the ribose concentration through the standard curve. The results showed that the ribose concentration of Bacillus pumilus (Bacillus pumilus) ATCC 31095 was 55g/L, while that of the recombinant bacteria could reach 72g/L, which was an increase of 31%. The synthesis of ribose in cells is through the pentose phosphate pathway, which consumes a large amount of intracellular oxidative power, and meeting the metabolic needs of cells by increasing dissolved oxygen will promote the formation of spores, which is not conducive to the production of ribose through cell vegetative growth, so phbCAB The introduction of the gene can provide cells with a certain oxidizing power NADPH from the endogenous way, which is beneficial to the synthesis of ribose.
实施例22、在大肠杆菌中表达phbCAB提高细菌对重金属离子Hg2+的耐受性Example 22, expressing phbCAB in Escherichia coli improves bacterial tolerance to heavy metal ion Hg2+
菌种:大肠杆菌(Escherichia coli)JM109。Bacterial species: Escherichia coli JM109.
大肠杆菌(Escherichia coli)JM109的基本培养基为LB培养基(g/100mL):蛋白胨1.0;酵母提取物0.5;NaCl 1.0,pH 7.0。The basic medium of Escherichia coli JM109 is LB medium (g/100mL): peptone 1.0; yeast extract 0.5; NaCl 1.0, pH 7.0.
重组菌的基本培养基为:LB培养基中加入氨苄青霉素至终浓度60μg/mL。The basic medium of the recombinant bacteria is: add ampicillin to the LB medium to a final concentration of 60 μg/mL.
将质粒pBHR68用电转化的方法转入大肠杆菌(Escherichia coli)JM109获得重组菌(含有pBHR68的大肠杆菌(Escherichia coli)JM109)。野生型E.coli JM109作为对照。The plasmid pBHR68 was transformed into Escherichia coli (Escherichia coli) JM109 by electrotransformation method to obtain recombinant bacteria (Escherichia coli (Escherichia coli) JM109 containing pBHR68). Wild-type E.coli JM109 was used as a control.
将大肠杆菌(Escherichia coli)JM109和重组菌分别接入加入了1mg/L、2mg/L、3mg/L、4mg/L、5mg/L、6mg/L、8mg/L或10mg/L HgCl2的各自的基本培养基中,培养条件为500mL三角瓶装液量100mL,37℃,200rpm,培养24小时,测定发酵液的OD600。结果表明当Hg2+浓度为4mg/L时,重组菌的生长受到一定抑制,最大OD600从2.7降到了1.9;当Hg2+浓度上升到10mg/L时,菌体生长几乎完全停止。实验还表明对于未经外源基因转化的原始宿主菌E.coli JM109,在Hg2+浓度为2mg/L时就完全不能生长。PHB基因的转入使细菌对汞的耐受力得到了增强。Escherichia coli (Escherichia coli) JM109 and recombinant bacteria were respectively inserted into the solution of 1mg/L, 2mg/L, 3mg/L, 4mg/L, 5mg/L, 6mg/L, 8mg/L or 10mg/L HgCl 2 In the respective basal medium, the culture conditions were as follows: 500 mL Erlenmeyer flask with 100 mL liquid volume, 37° C., 200 rpm, cultured for 24 hours, and measured the OD 600 of the fermentation broth. The results showed that when the concentration of Hg 2+ was 4mg/L, the growth of the recombinant bacteria was inhibited to some extent, and the maximum OD 600 dropped from 2.7 to 1.9; when the concentration of Hg 2+ rose to 10mg/L, the growth of the bacteria almost stopped completely. Experiments also showed that the original host strain E.coli JM109 without exogenous gene transformation could not grow at all when the Hg 2+ concentration was 2 mg/L. The transfer of PHB gene enhanced the tolerance of bacteria to mercury.
在相同操作条件下两种菌体从2.5mg/L Hg2+浓度的模拟废水中富集汞离子,重组菌的最终富集量为5.1mg/g细胞干重,而原始E.coli JM109则仅为1.7mg/g细胞干重。其中,细胞干重用冰干法测量。Under the same operating conditions, the two kinds of bacteria enriched mercury ions from the simulated wastewater with a concentration of 2.5mg/L Hg 2+ , and the final enrichment amount of the recombinant bacteria was 5.1mg/g cell dry weight, while the original E. Only 1.7mg/g cell dry weight. Among them, the dry weight of cells was measured by freeze-drying method.
实验表明加入PHB合成基因的重组菌与大肠杆菌(Escherichia coli)JM109相比对于Hg2+的耐受程度有了较大的提高,在相同的条件下能够更好的在含有重金属离子的培养基中生长。Experiments have shown that the recombinant bacteria added with the PHB synthesis gene have a greater tolerance to Hg 2+ than Escherichia coli JM109, and can better survive in the medium containing heavy metal ions under the same conditions. grow in.
实施例23、运动发酵单胞菌中表达phbCAB提高细菌的对高酒精环境耐受性Example 23, expression of phbCAB in Zymomonas mobilis improves bacterial tolerance to high alcohol environments
菌种:运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286。Strain: Zymomonas mobilis NRRL B-4286.
将按照实施例11的方法获得的质粒pBBRHB以电转化的方法转入到运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286中获得重组菌(含有pBBRHB的运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286)进行发酵实验。The plasmid pBBRHB obtained according to the method of Example 11 was transferred to Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 by electroporation to obtain recombinant bacteria (Zymomonas mobilis (Zymomonas mobilis) NRRL containing pBBRHB B-4286) for fermentation experiments.
种子培养基组分(g/L):葡萄糖100,蛋白胨10,酵母膏15,pH 6.0。Seed medium components (g/L): glucose 100, peptone 10, yeast extract 15, pH 6.0.
发酵培养基组分(g/L):葡萄糖150,蛋白胨25,酵母膏25,pH 4.5或pH6.0。Fermentation medium components (g/L): glucose 150, peptone 25, yeast extract 25, pH 4.5 or pH 6.0.
发酵液中乙醇质量浓度、菌体浓度、还原糖质量浓度的测定参考(Ingram LO,Gomez PF,Lai X,Moniruzzaman M,Wood BE,Yomano LP and York SW.Metabolic engineering of bacteria for ethanol production.Biotechnol.Bioeng.1998,58:204-214)References for determination of ethanol mass concentration, bacterium concentration, and reducing sugar mass concentration in fermentation broth (Ingram LO, Gomez PF, Lai X, Moniruzzaman M, Wood BE, Yomano LP and York SW. Metabolic engineering of bacteria for ethanol production. Biotechnol. Bioeng. 1998, 58: 204-214)
培养条件:Training conditions:
冰箱保藏的菌种分别接入种子培养基中,培养12小时后,以10%(v/v)的接种量分别接入发酵培养基中,进行静止厌氧乙醇发酵。The bacterial strains preserved in the refrigerator were respectively inserted into the seed medium, and after 12 hours of cultivation, they were respectively inserted into the fermentation medium with an inoculation amount of 10% (v/v) to carry out static anaerobic ethanol fermentation.
发酵三角瓶250mL,装液量为100mL,发酵pH 4.5(重组菌),温度35℃,发酵时间48小时。运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286的发酵pH 4.5和6.0作为对照。Fermentation Erlenmeyer flask 250mL, liquid volume 100mL, fermentation pH 4.5 (recombinant bacteria), temperature 35°C, fermentation time 48 hours. Fermentation pH 4.5 and 6.0 of Zymomonas mobilis NRRL B-4286 were used as controls.
实验表明,运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286在pH 4.5和6.0的乙醇产量分别为21.1g/L和62.5g/L,重组菌在pH 4.5的乙醇产量为59.2g/L,接近运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286在pH 6.0时的水平,表明phbCAB基因的转入有效的提高了细菌的耐酸性,进一步优化发酵条件可以在较低的pH下实现乙醇的高效生产。Experiments show that the ethanol production of Zymomonas mobilis NRRL B-4286 at pH 4.5 and 6.0 is 21.1g/L and 62.5g/L respectively, and the ethanol production of recombinant bacteria at pH 4.5 is 59.2g/L, It is close to the level of Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 at pH 6.0, indicating that the transfer of phbCAB gene can effectively improve the acid resistance of bacteria, and further optimization of fermentation conditions can realize the production of ethanol at a lower pH Efficient production.
实施例24、在运动发酵单胞菌中表达phbCAB提高细菌对葡萄糖的利用能力Example 24, expressing phbCAB in Zymomonas mobilis improves the ability of bacteria to utilize glucose
菌种:运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286。Strain: Zymomonas mobilis NRRL B-4286.
将按照实施例11的方法获得的质粒pBBRHB以电转化的方法转入到运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286中获得重组菌(含有pBBRHB的运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286)进行发酵实验。The plasmid pBBRHB obtained according to the method of Example 11 was transferred to Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 by electroporation to obtain recombinant bacteria (Zymomonas mobilis (Zymomonas mobilis) NRRL containing pBBRHB B-4286) for fermentation experiments.
种子培养基组分(g/L):蛋白胨10,酵母膏15,pH 6.0。Seed medium components (g/L): peptone 10, yeast extract 15, pH 6.0.
发酵培养基组分(g/L):蛋白胨25,酵母膏25,pH 6.0,葡萄糖。其中,葡萄糖的浓度分别为120,150,160,180,210g/L梯度。Fermentation medium components (g/L): peptone 25, yeast extract 25, pH 6.0, glucose. Wherein, the concentration of glucose is respectively 120, 150, 160, 180, 210 g/L gradient.
发酵液中乙醇质量浓度、菌体浓度、还原糖质量浓度的测定参考(Ingram LO,Gomez PF,Lai X,Moniruzzaman M,Wood BE,Yomano LP and York SW.Metabolic engineering of bacteria for ethanol production.Biotechnol.Bioeng.1998,58:204-214)References for determination of ethanol mass concentration, bacterium concentration, and reducing sugar mass concentration in fermentation broth (Ingram LO, Gomez PF, Lai X, Moniruzzaman M, Wood BE, Yomano LP and York SW. Metabolic engineering of bacteria for ethanol production. Biotechnol. Bioeng. 1998, 58: 204-214)
培养条件:Training conditions:
冰箱保藏的菌种分别接入种子培养基中,培养12小时后,以体积分数10%的接种量分别接入发酵培养基中,进行静止厌氧乙醇发酵。The strains stored in the refrigerator were respectively inoculated into the seed medium, and after 12 hours of cultivation, they were respectively inoculated into the fermentation medium with an inoculation amount of 10% by volume to carry out static anaerobic ethanol fermentation.
发酵三角瓶500mL,装液量为100mL,发酵pH 6.0,温度35℃,发酵时间48h。分别在不同浓度的葡萄糖条件下培养运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286和重组菌。Fermentation Erlenmeyer flask 500mL, liquid volume 100mL, fermentation pH 6.0, temperature 35°C, fermentation time 48h. Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 and recombinant bacteria were cultured under different concentrations of glucose.
实验结果表明,运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286在葡萄糖浓度150g/L时,乙醇的产量达到最大,为65g/L,而重组菌在葡萄糖浓度增加到210g/L时 乙醇的产量一直是上升趋势,最大为95g/L。PHB合成途径的导入使得细菌对于渗透压的抗性增强,初糖浓度很高时依然保持良好的生长。运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286的乙醇发酵过程有着比酵母更高的葡萄糖的利用率,但是当初始的葡萄糖浓度达到一定程度后,乙醇产量反而下降。当转入PHB的合成基因后,发酵达到乙醇最大产量的初糖浓度比运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286有了一定的提高。表明phbCAB的转入有利于提高细菌对渗透压抵抗程度。The experimental results showed that when the glucose concentration of Zymomonas mobilis NRRL B-4286 was 150g/L, the production of ethanol reached the maximum, which was 65g/L, while the recombinant bacteria produced ethanol when the glucose concentration increased to 210g/L. The yield has been on the rise, with a maximum of 95g/L. The introduction of the PHB synthesis pathway enhanced the bacteria's resistance to osmotic pressure, and maintained good growth even when the initial sugar concentration was high. The ethanol fermentation process of Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 has a higher utilization rate of glucose than yeast, but when the initial glucose concentration reaches a certain level, the ethanol production decreases instead. When the synthetic gene of PHB was transferred, the initial sugar concentration for fermentation to reach the maximum yield of ethanol was higher than that of Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286. It shows that the transfer of phbCAB is beneficial to improve the resistance of bacteria to osmotic pressure.
实施例25、在丁酸梭芽孢杆菌中表达phbCAB提高从甘油发酵制备1,3-丙二醇(1,3-PDO)的生产Example 25. Expression of phbCAB in Clostridium butyricum improves production of 1,3-propanediol (1,3-PDO) from glycerol fermentation
菌种:丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260。Bacterial species: Clostridium butyricum ATCC 8260.
将按照实施例1方法获得的质粒pEUHB以乙酸锂转化的方法转入到丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260中获得重组菌(含有pEUHB的丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transformed into Clostridium butyricum (Clostridium butyricum) ATCC 8260 with lithium acetate transformation method to obtain recombinant bacteria (clostridium butyricum (Clostridium butyricum) ATCC 8260 containing pEUHB) Conduct fermentation experiments.
该发酵需厌氧培养,发酵培养基为:甘油6%,葡萄糖1%,玉米浆2%,(NH4)2SO40.2%。发酵温度为34℃,初始pH为6.5~7。The fermentation requires anaerobic culture, and the fermentation medium is: glycerol 6%, glucose 1%, corn steep liquor 2%, (NH 4 ) 2 SO 4 0.2%. The fermentation temperature is 34°C, and the initial pH is 6.5-7.
培养条件:Training conditions:
间歇发酵分为两步进行,首先将丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260和重组菌分别接于装液量为100mL的150mL三角瓶中,在厌氧条件下,于36℃,100rpm,培养15h,然后以10%(v/v)的接种量接入装液量为200mL的250mL三角瓶中,石蜡液封,于34℃、150rpm、初始pH 6.8进行发酵。定期取样测定甘油残余量和1,3-PDO的生成量。Batch fermentation is divided into two steps. First, Clostridium butyricum ATCC 8260 and recombinant bacteria are respectively connected to 150 mL Erlenmeyer flasks with a liquid volume of 100 mL. Under anaerobic conditions, at 36 ° C, 100 rpm, Cultivate for 15 hours, then insert 10% (v/v) inoculum into a 250mL Erlenmeyer flask with a liquid volume of 200mL, seal with paraffin, and ferment at 34°C, 150rpm, and initial pH 6.8. Samples were taken regularly to determine the residual glycerol and the generation of 1,3-PDO.
发酵液中甘油和1,3-PDO的浓度用气相色谱法检测,色谱柱为大口径毛细管,0.5mm×20m,柱温170℃、气化室温度260℃,载气为氮气,流速50mL/min,采用内标法(内标物质为1,62己二醇)定量。The concentration of glycerol and 1,3-PDO in the fermentation broth was detected by gas chromatography. The chromatographic column was a large-diameter capillary tube, 0.5mm×20m, the column temperature was 170°C, the gasification chamber temperature was 260°C, the carrier gas was nitrogen, and the flow rate was 50mL/ min, quantified by internal standard method (internal standard substance is 1,62 hexanediol).
产物分离:发酵液离心后,上清液用油浴蒸馏得到1,3-PDO产品。Product separation: After the fermentation broth is centrifuged, the supernatant is distilled in an oil bath to obtain 1,3-PDO product.
菌体生长的生物量:用比色法检测(OD650nm)。Biomass of bacterial growth: detected by colorimetry (OD 650 nm).
丁酸梭芽孢杆菌(Clostridium butyricum)ATCC 8260的1,3-丙二醇产量为15.7g/L,而重组菌为20.4g/L。丁酸梭杆菌的生长pH在6~7.5之间,其以甘油为底物的发酵代谢的副产物主要为丁酸和乙酸,因而在发酵过程中的酸度的上升将会严重影响菌体生长,同时抑制1,3-PDO生成。由此可见要获得高产的1,3-PDO在发酵过程中须将pH控制在6.5~7之间。如果将PHB的合成基因导入到细菌中,使得细菌对酸性条件的耐受性增强,则可以在不用调节pH的条件下获得较高的1,3-PDO产量。The 1,3-propanediol yield of Clostridium butyricum ATCC 8260 was 15.7g/L, while that of the recombinant strain was 20.4g/L. The growth pH of Fusobacterium butyricum is between 6 and 7.5, and the by-products of its fermentation metabolism with glycerol as the substrate are mainly butyric acid and acetic acid, so the increase in acidity during the fermentation process will seriously affect the growth of the bacteria. Simultaneously inhibit 1,3-PDO generation. It can be seen that in order to obtain high-yield 1,3-PDO, the pH must be controlled between 6.5 and 7 during the fermentation process. If the synthetic gene of PHB is introduced into the bacterium, so that the tolerance of the bacterium to acidic conditions is enhanced, a higher 1,3-PDO yield can be obtained without adjusting the pH.
实施例26、芽孢杆菌中表达phbCAB提高细菌厌氧条件下的对原油的分解Example 26, expression of phbCAB in Bacillus improves the decomposition of crude oil under bacterial anaerobic conditions
菌种:芽孢杆菌(Bacillus sp)L-23(李清心,康从宝,王浩,张长铠,芽孢杆菌发酵条件的优化及其在室内条件下提高原油采收率的初步研究,工业微生物,2002,32: 28-31)。Strain: Bacillus sp L-23 (Li Qingxin, Kang Congbao, Wang Hao, Zhang Changkai, Optimizing the fermentation conditions of Bacillus sp and preliminary research on enhancing oil recovery under indoor conditions, Industrial Microbiology, 2002 , 32: 28-31).
重组菌的获得:将按照实施例1方法获得的质粒pEUHB以乙酸锂转化的方法转入到芽孢杆菌(Bacillus sp)L-23中获得重组菌(含有pEUHB的芽孢杆菌(Bacillus sp)L-23)进行发酵实验。The acquisition of recombinant bacteria: the plasmid pEUHB obtained according to the method of Example 1 is transferred to Bacillus sp L-23 by the method of lithium acetate transformation to obtain recombinant bacteria (Bacillus sp L-23 containing pEUHB ) for fermentation experiments.
种子培养基(g/L):葡萄糖20,蛋白胨2,Na2HPO4 4,KH2PO4 2,MgSO4 0.5,CaCl2 0.005,pH 7.2。Seed medium (g/L): glucose 20, peptone 2, Na 2 HPO 4 4, KH 2 PO 4 2, MgSO 4 0.5, CaCl 2 0.005, pH 7.2.
发酵培养基(g/L):葡萄糖30,(NH4)2SO4 15,Na2HPO4 2,KH2PO4 2,MgSO4 0.5,pH 7.2。Fermentation medium (g/L): Glucose 30, (NH 4 ) 2 SO 4 15, Na 2 HPO 4 2, KH 2 PO 4 2, MgSO 4 0.5, pH 7.2.
将芽孢杆菌(Bacillus sp)L-23和重组菌菌种分别接入种子培养基中,培养12小时后,以体积分数10%的接种量分别接入发酵培养基中,发酵三角瓶500mL,装液量为100mL,温度35℃,发酵时间48小时。Insert Bacillus sp L-23 and recombinant strains into the seed medium respectively, and after culturing for 12 hours, insert them into the fermentation medium with an inoculation amount of 10% by volume fraction respectively, and ferment 500 mL of the Erlenmeyer flask, The liquid volume is 100mL, the temperature is 35°C, and the fermentation time is 48 hours.
发酵液中菌体浓度测定Determination of Bacteria Concentration in Fermentation Broth
取培养液经6000g离心30分钟后,用等量蒸馏水制成菌悬液,然后稀释,用722型分光光度计于660nm处测定菌悬液的OD值,事先作好标准曲线,求得标准曲线的方程,然后依此测得发酵液中菌体浓度。Take the culture solution and centrifuge it at 6000g for 30 minutes, make a bacterial suspension with an equal amount of distilled water, then dilute, measure the OD value of the bacterial suspension at 660nm with a 722-type spectrophotometer, and prepare a standard curve in advance to obtain the standard curve The equation, and then measure the bacterial concentration in the fermentation broth accordingly.
原油降粘实验:将不同浓度的芽孢杆菌(Bacillus sp)L-23或重组菌的发酵液,加入到来源不同的原油中,45℃培养24h,用离心机离心脱水后,再用粘度计测粘度的变化,求出降粘率。对于来源不同的原油,细菌的降粘效果有所不同,可能是这些原油的组成成分不同所致。原油中含有丰富的烃类、胶质、沥青质类等物质,从而使得原油具有一定的粘度。细菌在原油中生长时可以利用原油中的成分作为其生长的碳源,因此,对于其能降低原油粘度的原因分析有以下两种可能:一是通过对原油中烃类及其它物质的降解使原油的粘度下降;二是微生物利用原油产生了一些代谢产物,这些产物的作用使原油粘度下降。Crude oil viscosity reduction experiment: add different concentrations of Bacillus sp L-23 or recombinant bacterial fermentation broth to crude oil from different sources, incubate at 45°C for 24 hours, dehydrate with a centrifuge, and then measure with a viscometer Viscosity change, to find the viscosity reduction rate. For crude oils from different sources, the viscosity-reducing effect of bacteria is different, which may be caused by the different components of these crude oils. Crude oil is rich in hydrocarbons, colloids, asphaltenes and other substances, which make crude oil have a certain viscosity. When bacteria grow in crude oil, they can use components in crude oil as the carbon source for their growth. Therefore, there are two possibilities for the analysis of the reasons why they can reduce the viscosity of crude oil: one is to degrade the hydrocarbons and other substances in crude oil to make The viscosity of crude oil decreases; the second is that microorganisms use crude oil to produce some metabolites, and the effect of these products reduces the viscosity of crude oil.
通过野生菌(芽孢杆菌(Bacillus sp)L-23)和转入PHB合成基因的重组菌的比较可以看出,重组菌对于原油的降粘作用更为明显,以一种原油的结果为例,结果表明重组菌在原油中的生长情况好于芽孢杆菌(Bacillus sp)L-23,因而对原油的降粘效果更好。这是由于PHB合成基因的转入使得细菌对渗透压的抗性提高,能在原油中更好的生长。Through the comparison of the wild bacteria (Bacillus sp L-23) and the recombinant bacteria transferred into the PHB synthetic gene, it can be seen that the viscosity-reducing effect of the recombinant bacteria on crude oil is more obvious. Taking the result of a crude oil as an example, The results showed that the growth of the recombinant bacteria in crude oil was better than that of Bacillus sp L-23, so the effect of reducing the viscosity of crude oil was better. This is because the transfer of the PHB synthesis gene makes the bacteria more resistant to osmotic pressure and can grow better in crude oil.
表1野生菌和重组菌的降粘效果比较Table 1 Comparison of the viscosity-lowering effect of wild bacteria and recombinant bacteria
实施例27、在嗜酸乳杆菌中表达phbCAB提高细菌在酸性条件下的存活率Example 27, expressing phbCAB in Lactobacillus acidophilus improves the survival rate of bacteria under acidic conditions
菌种:嗜酸乳杆菌(Lac tobacillus acidophilus)ATCC 53671。Species: Lactobacillus acidophilus (Lac tobacillus acidophilus) ATCC 53671.
按照实施例1的方法获得的质粒pEUHB以电转化的方法转入到嗜酸乳杆菌(Lactobacillus acidophilus)ATCC 53671中获得重组菌(含有pEUHB的嗜酸乳杆菌(Lactobacillus acidophilus)ATCC 53671)进行发酵实验。The plasmid pEUHB obtained according to the method of Example 1 was transferred to Lactobacillus acidophilus (Lactobacillus acidophilus) ATCC 53671 by electroporation to obtain recombinant bacteria (Lactobacillus acidophilus (Lactobacillus acidophilus) ATCC 53671 containing pEUHB) for fermentation experiment .
实验方法如下:The experimental method is as follows:
菌种传代培养基:12.8g脱脂奶粉溶于100mL蒸馏水中,121℃灭菌15min。Strain subculture medium: 12.8g of skim milk powder was dissolved in 100mL of distilled water, and sterilized at 121°C for 15min.
计数培养基:牛肉膏0.5%,蛋白胨1.0%,酵母膏0.6%,葡萄糖0.5%,琼脂1.8%,pH 6.8,121℃灭菌20min。Counting medium: beef extract 0.5%, peptone 1.0%, yeast extract 0.6%, glucose 0.5%, agar 1.8%, pH 6.8, sterilized at 121°C for 20 minutes.
豆汁的制备:将大豆室温(20℃左右)浸泡48小时,使大豆充分溶涨,磨浆(水∶豆=3∶1),两层纱布过滤除去豆渣即得。115℃灭菌15min。Soybean juice preparation: Soak soybeans at room temperature (about 20°C) for 48 hours to fully swell the soybeans, refine the pulp (water: beans = 3:1), filter with two layers of gauze to remove the bean dregs. Sterilize at 115°C for 15 minutes.
不同pH值豆汁的制备:以乳酸作为调节剂,将豆汁pH值分别调至4.0、4.5、5.0或5.5。豆汁的自然pH值为6.5左右,配制是在磁力搅拌器上进行,用pH酸度计监测。Preparation of soybean juice with different pH values: Using lactic acid as a regulator, adjust the pH value of soybean juice to 4.0, 4.5, 5.0 or 5.5. The natural pH value of soybean juice is about 6.5. The preparation is carried out on a magnetic stirrer and monitored with a pH meter.
保存实验:嗜酸乳杆菌(Lactobacillus acidophilus)ATCC 53671和重组菌分别于豆汁培养基(pH 6.5)中培养48小时,然后取菌液分别添加至不同pH值(4.0、4.5、5.0、5.5)的灭菌豆汁中,使活菌数目为1×107-108cfu/ml,置于4℃冰箱中保存10周,检测活菌数目变化。其中,计数方法:根据样品中含菌量的不同,作10倍系列浓度稀释,倒平板,37℃恒温培养72小时,计菌落数。存活率的计算:存活率=样品的活菌数目/样品中起始活菌数目×100%。Preservation experiment: Lactobacillus acidophilus (Lactobacillus acidophilus) ATCC 53671 and recombinant bacteria were cultured in soybean juice medium (pH 6.5) for 48 hours, and then the bacterial liquid was added to different pH values (4.0, 4.5, 5.0, 5.5) In the sterilized soybean juice, the number of viable bacteria was adjusted to 1×10 7 -10 8 cfu/ml, stored in a refrigerator at 4°C for 10 weeks, and the change of the number of viable bacteria was detected. Among them, the counting method: according to the difference in the amount of bacteria in the sample, make a 10-fold serial concentration dilution, pour the plate, incubate at a constant temperature of 37°C for 72 hours, and count the number of colonies. Calculation of survival rate: Survival rate=the number of viable bacteria in the sample/the number of initial viable bacteria in the sample×100%.
结果表明嗜酸乳杆菌(Lactobacillus acidophilus)ATCC 53671在不同的pH值的豆汁中保存,存活率不同,pH 4.0下存活率最低(2%),pH 5.0最高(11%)。在pH 4.5-pH5.5中保存,存活率变化不明显都在9%左右。10周保存实验的结果表明,pH 5.5下的存活率(9%)仅高于pH 4.5(8.2%)下的不足一倍。从活菌数目上看,10周后pH 4.0下活菌数目仍能维持在1×106cfu/ml以上水平,pH 4.5-5.5都在1×107cfu/ml以上水平。The results showed that Lactobacillus acidophilus (Lactobacillus acidophilus) ATCC 53671 was preserved in soybean juice with different pH values, and the survival rate was different. The survival rate was the lowest (2%) at pH 4.0, and the highest (11%) at pH 5.0. When stored in pH 4.5-pH 5.5, the survival rate does not change significantly and is about 9%. The results of the 10-week storage experiment showed that the survival rate at pH 5.5 (9%) was only less than double that at pH 4.5 (8.2%). In terms of the number of viable bacteria, the number of viable bacteria at pH 4.0 can still be maintained above 1×10 6 cfu/ml after 10 weeks, and the number of viable bacteria at pH 4.5-5.5 is above 1×10 7 cfu/ml.
重组菌的存活率在实验的几个pH(4.0、4.5、5.0、5.5)下变化不明显,都在20%左右,活菌的数目较野生菌有明显的提高,10周保存实验的活菌数目均在1×107cfu/ml以上水平。表明PHB的合成提高了细菌在酸性条件下的活菌数目。The survival rate of the recombinant bacteria did not change significantly at several pHs (4.0, 4.5, 5.0, 5.5) in the experiment, and they were all around 20%. The number of live bacteria was significantly higher than that of wild bacteria. The numbers were above 1×10 7 cfu/ml. It indicated that the synthesis of PHB increased the number of viable bacteria under acidic conditions.
重组的嗜酸乳杆菌在较低pH值(4.0、4.5)培养条件下具有较高的存活率和活菌数目在生产上具有重要的意义:一方面可以提高存活率,使制剂具有较高的活菌数:另一方面,较低的pH值环境可防止杂菌污染。Recombinant Lactobacillus acidophilus has a higher survival rate and number of viable bacteria under lower pH value (4.0, 4.5) culture conditions, which is of great significance in production: on the one hand, it can improve the survival rate and make the preparation have a higher Viable Bacteria: On the other hand, a lower pH environment prevents bacterial contamination.
实施例28、从脂肪酸β-氧化途径合成PHA的相关基因在荧光假单胞菌中的表达影响葡萄糖酸产量Example 28, the expression of genes related to the synthesis of PHA from the fatty acid β-oxidation pathway in Pseudomonas fluorescens affects the production of gluconic acid
菌种:荧光假单胞菌(Pseudomonas fluorescens)AS 1.55。Species: Pseudomonas fluorescens AS 1.55.
斜面培养基成分为:牛肉膏0.5%,蛋白胨1%,NaCl 0.5%,琼脂2%,pH7.0。The composition of the slant medium is: beef extract 0.5%, peptone 1%, NaCl 0.5%, agar 2%, pH 7.0.
种子培养基成分为:葡萄糖2%,玉米浆1%,尿素0.2%,KH2PO4 0.2%,MgSO4·7H2O 0.05%,pH7.0。The composition of the seed medium is: 2% glucose, 1% corn steep liquor, 0.2% urea, 0.2% KH 2 PO 4 , 0.05% MgSO 4 ·7H 2 O, pH 7.0.
发酵培养基成分为:淀粉水解糖14%,玉米浆1.5%,轻质碳酸钙4%,pH 6.7。The composition of the fermentation medium is: starch hydrolysis sugar 14%, corn steep liquor 1.5%, light calcium carbonate 4%, pH 6.7.
在标准的聚合酶链式反应条件下,以质粒pEE32(Fukui T,Doi Y.Cloning andanalysis of the poly(3-hydroxybutyrate-co-3-hydroxyhexanoate)biosynthesis geneof Aeromonas caviae.J.Bacteriol.,1997,179:4821-4830)为模板,用引物TAAGGTACCGAAGGAGAGCACATGAGCCA和TCTAAGCTTGGCTGATTGTGCCTGCGTG扩增出phaCJ基因,然后经过KpnI和HindIII酶切处理后,插入到质粒pBBR1MCS2的限制性内切酶KpnI和HindIII的识别位点间,获得质粒pBBRCJ。pBBRCJ以电转化的方法转入到荧光假单胞菌(Pseudomonas fluorescens)AS 1.55中获得重组菌(含有pBBRCJ的荧光假单胞菌(Pseudomonas fluorescens)AS 1.55)进行发酵实验。Under standard polymerase chain reaction conditions, the biosynthesis gene of Aeromonas caviae.J.Bacteriol., 1997, 179 : 4821-4830) as a template, using primers TAAGGTACCGAAGGAGAGCACATGAGCCA and TCTAAGCTTGGCTGATTGTGCCTGCGTG to amplify the phaCJ gene, and then after KpnI and HindIII digestion, insert it into the recognition site of the restriction endonuclease KpnI and HindIII of the plasmid pBBR1MCS2 to obtain a plasmid pBBRCJ. pBBRCJ was transformed into Pseudomonas fluorescens AS 1.55 by electrotransformation to obtain recombinant bacteria (Pseudomonas fluorescens AS 1.55 containing pBBRCJ) for fermentation experiments.
分别取培养在新鲜斜面上的荧光假单胞菌(Pseudomonas fluorescens)AS 1.55和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、230rpm下培养16小时后,以10%(v/v)接种量分别接入发酵培养基。发酵瓶500mL装液量50mL,在30℃、230rpm下培养72小时,测定发酵液中酮基葡萄糖酸含量。发酵液中酮基葡萄糖酸含量用旋光法测定:发酵液中酮基葡萄糖酸含量=25℃下发酵液旋光度绝对值/0.88。Pseudomonas fluorescens (Pseudomonas fluorescens) AS 1.55 and recombinant bacteria cultured on fresh slant were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively. The % (v/v) inoculum was added to the fermentation medium respectively. A 500 mL fermentation bottle with a liquid volume of 50 mL was cultured at 30° C. and 230 rpm for 72 hours, and the content of ketogluconic acid in the fermentation liquid was determined. The content of ketogluconic acid in the fermentation broth is determined by optical polarimetry: the content of ketogluconic acid in the fermentation broth = the absolute value of the optical rotation of the fermentation broth at 25° C./0.88.
结果表明荧光假单胞菌(Pseudomonas fluorescens)AS 1.55的发酵液中酮基葡萄糖酸含量为13.6g/L,重组菌的产量为15.8g/L,提高了大约16%,phaCJ基因的导入,能够在细胞内积累PHA,有利于提高菌的的耐受力,生长得更好,从而得到更高的转化率。The results show that the content of ketogluconic acid in the fermentation broth of Pseudomonas fluorescens AS 1.55 is 13.6g/L, and the output of the recombinant bacteria is 15.8g/L, which is about 16% higher. The introduction of the phaCJ gene can The accumulation of PHA in the cells is beneficial to improve the tolerance of the bacteria, grow better, and obtain a higher conversion rate.
实施例29、从脂肪酸从头合成途径合成PHA的相关基因在枯草芽孢杆菌中的表达影响肌苷的生物合成Example 29, the expression of genes related to the synthesis of PHA from fatty acid de novo synthesis pathway in Bacillus subtilis affects the biosynthesis of inosine
菌种:枯草芽孢杆菌(Bacillus subtilis)ATCC 19162。Bacterial species: Bacillus subtilis ATCC 19162.
种子培养基成分为葡萄糖20g/L,酵母粉15g/L,蛋白胨10g/L,玉米液7g/L,氯化钠2.5g/L,尿素2g/L,pH值7.0。The composition of the seed medium is glucose 20g/L, yeast powder 15g/L, peptone 10g/L, corn solution 7g/L, sodium chloride 2.5g/L, urea 2g/L, pH 7.0.
发酵培养基成分为葡萄糖140g/L,玉米液16g/L,酵母粉16g/L,尿素9g/L,硫酸铵16g/L,七水硫酸镁4g/L,磷酸氢二钾5g/L,碳酸钙20g/L,pH值7.0。The composition of the fermentation medium is glucose 140g/L, corn liquid 16g/L, yeast powder 16g/L, urea 9g/L, ammonium sulfate 16g/L, magnesium sulfate heptahydrate 4g/L, dipotassium hydrogen phosphate 5g/L, carbonic acid Calcium 20g/L, pH 7.0.
在标准的聚合酶链式反应条件下,以质粒pQH-CG(邱远征,聚羟基丁酸羟基己酸酯生物合成途径的基因工程改造,清华大学,2005,博士论文。)为模板,用引物ATACGACTCACTATAGGGC和AGTGCCAGATCTCGCAACGCAATTAATG扩增出phaGC基因,然后经过BamHI和BglII酶切处理后,插入到质粒pEU308的限制性内切酶BglII和BamHI的识别位点间,获得质粒pEUGC。pEUGC以乙酸锂转化的方法转入到枯草芽孢杆菌(Bacillussubtilis)ATCC 19162中获得重组菌(含有pEUGC的枯草芽孢杆菌(Bacillus subtilis)ATCC 19162)进行发酵实验。Under standard polymerase chain reaction conditions, using the plasmid pQH-CG (Qiu Yuanzheng, Genetic engineering transformation of polyhydroxybutyrate hydroxyhexanoate biosynthetic pathway, Tsinghua University, 2005, doctoral dissertation.) as a template, with primers The phaGC gene was amplified by ATACGACTCACTATAGGGC and AGTGCCAGATCTCGCAACGCAATTAATG, then digested with BamHI and BglII, and inserted between the recognition sites of restriction endonucleases BglII and BamHI of plasmid pEU308 to obtain plasmid pEUGC. pEUGC was transformed into Bacillus subtilis (Bacillus subtilis) ATCC 19162 by the method of lithium acetate transformation to obtain recombinant bacteria (Bacillus subtilis (Bacillus subtilis) ATCC 19162 containing pEUGC) for fermentation experiments.
分别取培养在新鲜斜面上的枯草芽孢杆菌(Bacillus subtilis)ATCC 19162和重 组菌分别接种到种子培养基(50mL/500mL锥形瓶),在32℃、200rpm下培养12小时后,以5%(v/v)接种量接入发酵培养基。7.5L发酵罐装液量3L,自动控制温度35℃,pH 6.5,搅拌速度600rpm,通气量1L/min,发酵时间68小时(肌苷产量不再增加),测定发酵液中肌苷含量。肌苷含量用HPLC测定,流动相为0.5%磷酸氢二钾,流速1.2mL/min,色谱柱为Hypersil ODS C18反相柱,检测波长为254nm。结果表明枯草芽孢杆菌(Bacillussubtilis)ATCC 19162的肌苷产量为19.7g/L,重组菌的产量为24.9g/L,提高了26.4%。在细胞内代谢途径中,为肌苷合成提供前体的单磷酸己糖途径会消耗大量的NADP,同时从6-磷酸葡萄糖到磷酸戊糖途径的调控酶6-磷酸葡萄糖脱氢酶受到NADPH的反馈抑制,因此NADPH的减少能促进葡萄糖向磷酸戊糖途径的转化。总的来说,肌苷合成是一个需要大量氧化力的生化代谢过程,高的NADP/NADPH水平能够有效的促进肌苷的合成。phaG C基因的引入,能够促进脂肪酸的从头合成途径,提高细胞内的氧化力,因此能够显著的提高肌苷的产量。Bacillus subtilis (Bacillus subtilis) ATCC 19162 and recombinant bacteria cultured on fresh slopes were inoculated into seed medium (50mL/500mL Erlenmeyer flask) respectively. (v/v) The inoculum size was inserted into the fermentation medium. The 7.5L fermentation tank has a liquid volume of 3L, automatic temperature control of 35°C, pH 6.5, stirring speed of 600rpm, ventilation rate of 1L/min, and fermentation time of 68 hours (no increase in inosine production), and the content of inosine in the fermentation broth was determined. The inosine content was determined by HPLC, the mobile phase was 0.5% dipotassium hydrogen phosphate, the flow rate was 1.2mL/min, the chromatographic column was a Hypersil ODS C18 reverse-phase column, and the detection wavelength was 254nm. The results showed that the inosine yield of Bacillus subtilis (Bacillus subtilis) ATCC 19162 was 19.7g/L, and the yield of the recombinant strain was 24.9g/L, an increase of 26.4%. Among intracellular metabolic pathways, the monophosphate hexose pathway that provides precursors for inosine synthesis consumes a large amount of NADP, while the regulatory enzyme 6-phosphate glucose dehydrogenase from glucose 6-phosphate to pentose phosphate pathway is regulated by NADPH Feedback inhibition, thus reduction of NADPH can promote the conversion of glucose to pentose phosphate pathway. In general, inosine synthesis is a biochemical metabolic process that requires a large amount of oxidative power, and high NADP/NADPH levels can effectively promote inosine synthesis. The introduction of the phaG C gene can promote the de novo synthesis of fatty acids and increase the oxidative power in cells, thus significantly increasing the production of inosine.
实施例30、在运动发酵单胞菌中表达phbCAB基因影响乙醇产量Example 30. Expression of phbCAB gene in Zymomonas mobilis affects ethanol production
菌种:运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286。Strain: Zymomonas mobilis NRRL B-4286.
斜面培养基成分为:葡萄糖10g/L,蛋白胨10g/L,酵母粉15g/L,磷酸二氢钾1g/L,硫酸铵1g/L,七水硫酸镁1g/L,NaCl 1g/L,琼脂15g/L,pH值7.0。The composition of the slant medium is: glucose 10g/L, peptone 10g/L, yeast powder 15g/L, potassium dihydrogen phosphate 1g/L, ammonium sulfate 1g/L, magnesium sulfate heptahydrate 1g/L, NaCl 1g/L, agar 15g/L, pH 7.0.
种子培养基成分为:葡萄糖100g/L,酵母粉15g/L,蛋白胨10g/L,pH值7.0。The composition of the seed medium is: glucose 100g/L, yeast powder 15g/L, peptone 10g/L, pH 7.0.
发酵培养基成分为:葡萄糖200g/L,酵母粉15g/L,蛋白胨10g/L,pH值7.0。The composition of the fermentation medium is: glucose 200g/L, yeast powder 15g/L, peptone 10g/L, pH 7.0.
将按照实施例11的方法获得的质粒pBBRHB以电转化的方法转入到运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286中获得重组菌(含有pBBRHB的运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286)进行发酵实验。The plasmid pBBRHB obtained according to the method of Example 11 was transferred to Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 by electroporation to obtain recombinant bacteria (Zymomonas mobilis (Zymomonas mobilis) NRRL containing pBBRHB B-4286) for fermentation experiments.
分别取培养在新鲜斜面上的运动发酵单胞菌(Zymomonas mobilis)NRRL B-4286和重组菌分别接种到种子培养基(50mL/500mL锥形瓶),在30℃、200rpm下培养16小时后,以10%(v/v)接种量分别接入发酵培养基。发酵瓶500mL装液量50mL,在30℃、200rpm下培养72小时,测定发酵液中的乙醇含量。乙醇浓度用高效液相色谱测量:发酵液8000g离心十分钟,取上清过滤后作为样品;色谱柱为Beckman公司L2Spherogel配合基交换柱,流动相为98%的浓硫酸∶H2O(体积比为0.5∶1000),流速1mL/min。Zymomonas mobilis (Zymomonas mobilis) NRRL B-4286 and recombinant bacteria cultured on fresh slant were respectively inoculated into seed medium (50mL/500mL Erlenmeyer flask), and cultured at 30°C and 200rpm for 16 hours, The inoculum was respectively inserted into the fermentation medium with 10% (v/v) inoculum. A 500 mL fermentation bottle was filled with a liquid volume of 50 mL, cultured at 30° C. and 200 rpm for 72 hours, and the ethanol content in the fermentation liquid was measured. The ethanol concentration is measured by high-performance liquid chromatography: the fermentation broth is centrifuged at 8000g for ten minutes, and the supernatant is filtered as a sample; the chromatographic column is a Beckman L2Spherogel ligand exchange column, and the mobile phase is 98% concentrated sulfuric acid: H 2 O (volume ratio 0.5:1000), flow rate 1mL/min.
结果表明野生菌的发酵液乙醇浓度为14%,重组菌的乙醇浓度为18%,提高了28%,phbCAB基因的引入,不仅可以改变细胞内的代谢流,而且PHA的合成能够提高细菌对高乙醇环境的耐受性,从而提高了乙醇的产量。The results showed that the ethanol concentration of the fermented liquid of wild bacteria was 14%, and that of recombinant bacteria was 18%, which was increased by 28%. The introduction of phbCAB gene could not only change the metabolic flow in cells, but also the synthesis of PHA could improve the bacteria's ability to treat high Tolerance of the ethanol environment, thereby increasing the production of ethanol.
序列表 sequence listing
<160>1 <160>1
<210>1 <210>1
<211>3884 <211>3884
<212>DNA <212>DNA
<213>Wautersia eutropha <213>Wautersia eutropha
<400>1 <400>1
ataaagctta aggaggatgg cgaccggcaa aggcgcggca gcttccacgc aggaaggcaa 60 ataaagctta aggaggatgg cgaccggcaa aggcgcggca gcttccacgc aggaaggcaa 60
gtcccaacca ttcaaggtca cgccggggcc attcgatcca gccacatggc tggaatggtc 120 gtcccaacca ttcaaggtca cgccggggcc attcgatcca gccacatggc tggaatggtc 120
ccgccagtgg cagggcactg aaggcaacgg ccacgcggcc gcgtccggca ttccgggcct 180 ccgccagtgg cagggcactg aaggcaacgg ccacgcggcc gcgtccggca ttccgggcct 180
ggatgcgctg gcaggcgtca agatcgcgcc ggcgcagctg ggtgatatcc agcagcgcta 240 ggatgcgctg gcaggcgtca agatcgcgcc ggcgcagctg ggtgatatcc agcagcgcta 240
catgaaggac ttctcagcgc tgtggcaggc catggccgag ggcaaggccg aggccaccgg 300 catgaaggac ttctcagcgc tgtggcaggc catggccgag ggcaaggccg aggccaccgg 300
tccgctgcac gaccggcgct tcgccggcga cgcatggcgc accaacctcc catatcgctt 360 tccgctgcac gaccggcgct tcgccggcga cgcatggcgc accaacctcc catatcgctt 360
cgctgccgcg ttctacctgc tcaatgcgcg cgccttgacc gagctggccg atgccgtcga 420 cgctgccgcg ttctacctgc tcaatgcgcg cgccttgacc gagctggccg atgccgtcga 420
ggccgatgcc aagacccgcc agcgcatccg cttcgcgatc tcgcaatggg tcgatgcgat 480 ggccgatgcc aagacccgcc agcgcatccg cttcgcgatc tcgcaatggg tcgatgcgat 480
gtcgcccgcc aacttccttg ccaccaatcc cgaggcgcag cgcctgctga tcgagtcggg 540 gtcgcccgcc aacttccttg ccaccaatcc cgaggcgcag cgcctgctga tcgagtcggg 540
cggcgaatcg ctgcgtgccg gcgtgcgcaa catgatggaa gacctgacac gcggcaagat 600 cggcgaatcg ctgcgtgccg gcgtgcgcaa catgatggaa gacctgacac gcggcaagat 600
ctcgcagacc gacgagagcg cgtttgaggt cggccgcaat gtcgcggtga ccgaaggcgc 660 ctcgcagacc gacgagagcg cgtttgaggt cggccgcaat gtcgcggtga ccgaaggcgc 660
cgtggtcttc gagaacgagt acttccagct gttgcagtac aagccgctga ccgacaaggt 720 cgtggtcttc gagaacgagt acttccagct gttgcagtac aagccgctga ccgacaaggt 720
gcacgcgcgc ccgctgctga tggtgccgcc gtgcatcaac aagtactaca tcctggacct 780 gcacgcgcgc ccgctgctga tggtgccgcc gtgcatcaac aagtactaca tcctggacct 780
gcagccggag agctcgctgg tgcgccatgt ggtggagcag ggacatacgg tgtttctggt 840 gcagccggag agctcgctgg tgcgccatgt ggtggagcag ggacatacgg tgtttctggt 840
gtcgtggcgc aatccggacg ccagcatggc cggcagcacc tgggacgact acatcgagca 900 gtcgtggcgc aatccggacg ccagcatggc cggcagcacc tgggacgact acatcgagca 900
cgcggccatc cgcgccatcg aagtcgcgcg cgacatcagc ggccaggaca agatcaacgt 960 cgcggccatc cgcgccatcg aagtcgcgcg cgacatcagc ggccaggaca agatcaacgt 960
gctcggcttc tgcgtgggcg gcaccattgt ctcgaccgcg ctggcggtgc tggccgcgcg 1020 gctcggcttc tgcgtgggcg gcaccattgt ctcgaccgcg ctggcggtgc tggccgcgcg 1020
cggcgagcac ccggccgcca gcgtcacgct gctgaccacg ctgctggact ttgccgacac 1080 cggcgagcac ccggccgcca gcgtcacgct gctgaccacg ctgctggact ttgccgacac 1080
gggcatcctc gacgtctttg tcgacgaggg ccatgtgcag ttgcgcgagg ccacgctggg 1140 gggcatcctc gacgtctttg tcgacgaggg ccatgtgcag ttgcgcgagg ccacgctggg 1140
cggcggcgcc ggcgcgccgt gcgcgctgct gcgcggcctt gagctggcca ataccttctc 1200 cggcggcgcc ggcgcgccgt gcgcgctgct gcgcggcctt gagctggcca ataccttctc 1200
gttcttgcgc ccgaacgacc tggtgtggaa ctacgtggtc gacaactacc tgaagggcaa 1260 gttcttgcgc ccgaacgacc tggtgtggaa ctacgtggtc gacaactacc tgaagggcaa 1260
cacgccggtg ccgttcgacc tgctgttctg gaacggcgac gccaccaacc tgccggggcc 1320 cacgccggtg ccgttcgacc tgctgttctg gaacggcgac gccaccaacc tgccggggcc 1320
gtggtactgc tggtacctgc gccacaccta cctgcagaac gagctcaagg taccgggcaa 1380 gtggtactgc tggtacctgc gccacaccta cctgcagaac gagctcaagg taccgggcaa 1380
gctgaccgtg tgcggcgtgc cggtggacct ggccagcatc gacgtgccga cctatatcta 1440 gctgaccgtg tgcggcgtgc cggtggacct ggccagcatc gacgtgccga cctatatcta 1440
cggctcgcgc gaagaccata tcgtgccgtg gaccgcggcc tatgcctcga ccgcgctgct 1500 cggctcgcgc gaagaccata tcgtgccgtg gaccgcggcc tatgcctcga ccgcgctgct 1500
ggcgaacaag ctgcgcttcg tgctgggtgc gtcgggccat atcgccggtg tgatcaaccc 1560 ggcgaacaag ctgcgcttcg tgctgggtgc gtcgggccat atcgccggtg tgatcaaccc 1560
gccggccaag aacaagcgca gccactggac taacgatgcg ctgccggagt cgccgcagca 1620 gccggccaag aacaagcgca gccactggac taacgatgcg ctgccggagt cgccgcagca 1620
atggctggcc ggcgccatcg agcatcacgg cagctggtgg ccggactgga ccgcatggct 1680 atggctggcc ggcgccatcg agcatcacgg cagctggtgg ccggactgga ccgcatggct 1680
ggccgggcag gccggcgcga aacgcgccgc gcccgccaac tatggcaatg cgcgctatcg 1740 ggccgggcag gccggcgcga aacgcgccgc gcccgccaac tatggcaatg cgcgctatcg 1740
cgcaatcgaa cccgcgcctg ggcgatacgt caaagccaag gcatgacgct tgcatgagtg 1800 cgcaatcgaa cccgcgcctg ggcgatacgt caaagccaag gcatgacgct tgcatgagtg 1800
ccggcgtgcg tcatgcacgg cgccggcagg cctgcaggtt ccctcccgtt tccattgaaa 1860 ccggcgtgcg tcatgcacgg cgccggcagg cctgcaggtt ccctcccgtt tccatgaaa 1860
ggactacaca atgactgacg ttgtcatcgt atccgccgcc cgcaccgcgg tcggcaagtt 1920 ggactacaca atgactgacg ttgtcatcgt atccgccgcc cgcaccgcgg tcggcaagtt 1920
tggcggctcg ctggccaaga tcccggcacc ggaactgggt gccgtggtca tcaaggccgc 1980 tggcggctcg ctggccaaga tcccggcacc ggaactgggt gccgtggtca tcaaggccgc 1980
gctggagcgc gccggcgtca agccggagca ggtgagcgaa gtcatcatgg gccaggtgct 2040 gctggagcgc gccggcgtca agccggagca ggtgagcgaa gtcatcatgg gccaggtgct 2040
gaccgccggt tcgggccaga accccgcacg ccaggccgcg atcaaggccg gcctgccggc 2100 gaccgccggt tcgggccaga accccgcacg ccaggccgcg atcaaggccg gcctgccggc 2100
gatggtgccg gccatgacca tcaacaaggt gtgcggctcg ggcctgaagg ccgtgatgct 2160 gatggtgccg gccatgacca tcaacaaggt gtgcggctcg ggcctgaagg ccgtgatgct 2160
ggccgccaac gcgatcatgg cgggcgacgc cgagatcgtg gtggccggcg gccaggaaaa 2220 ggccgccaac gcgatcatgg cgggcgacgc cgagatcgtg gtggccggcg gccaggaaaa 2220
catgagcgcc gccccgcacg tgctgccggg ctcgcgcgat ggtttccgca tgggcgatgc 2280 catgagcgcc gccccgcacg tgctgccggg ctcgcgcgat ggtttccgca tgggcgatgc 2280
caagctggtc gacaccatga tcgtcgacgg cctgtgggac gtgtacaacc agtaccacat 2340 caagctggtc gacaccatga tcgtcgacgg cctgtgggac gtgtacaacc agtaccacat 2340
gggcatcacc gccgagaacg tggccaagga atacggcatc acacgcgagg cgcaggatga 2400 gggcatcacc gccgagaacg tggccaagga atacggcatc acacgcgagg cgcaggatga 2400
gttcgccgtc ggctcgcaga acaaggccga agccgcgcag aaggccggca agtttgacga 2460 gttcgccgtc ggctcgcaga acaaggccga agccgcgcag aaggccggca agtttgacga 2460
agagatcgtc ccggtgctga tcccgcagcg caagggcgac ccggtggcct tcaagaccga 2520 agagatcgtc ccggtgctga tcccgcagcg caagggcgac ccggtggcct tcaagaccga 2520
cgagttcgtg cgccagggcg ccacgctgga cagcatgtcc ggcctcaagc ccgccttcga 2580 cgagttcgtg cgccagggcg ccacgctgga cagcatgtcc ggcctcaagc ccgccttcga 2580
caaggccggc acggtgaccg cggccaacgc ctcgggcctg aacgacggcg ccgccgcggt 2640 caaggccggc acggtgaccg cggccaacgc ctcgggcctg aacgacggcg ccgccgcggt 2640
ggtggtgatg tcggcggcca aggccaagga actgggcctg accccgctgg ccacgatcaa 2700 ggtggtgatg tcggcggcca aggccaagga actgggcctg accccgctgg ccacgatcaa 2700
gagctatgcc aacgccggtg tcgatcccaa ggtgatgggc atgggcccgg tgccggcctc 2760 gagctatgcc aacgccggtg tcgatcccaa ggtgatgggc atgggcccgg tgccggcctc 2760
caagcgcgcc ctgtcgcgcg ccgagtggac cccgcaagac ctggacctga tggagatcaa 2820 caagcgcgcc ctgtcgcgcg ccgagtggac cccgcaagac ctggacctga tggagatcaa 2820
cgaggccttt gccgcgcagg cgctggcggt gcaccagcag atgggctggg acacctccaa 2880 cgaggccttt gccgcgcagg cgctggcggt gcaccagcag atgggctggg acacctccaa 2880
ggtcaatgtg aacggcggcg ccatcgccat cggccacccg atcggcgcgt cgggctgccg 2940 ggtcaatgtg aacggcggcg ccatcgccat cggccacccg atcggcgcgt cgggctgccg 2940
tatcctggtg acgctgctgc acgagatgaa gcgccgtgac gcgaagaagg gcctggcctc 3000 tatcctggtg acgctgctgc acgagatgaa gcgccgtgac gcgaagaagg gcctggcctc 3000
gctgtgcatc ggcggcggca tgggcgtggc gctggcagtc gagcgcaaat aaggaagggg 3060 gctgtgcatc ggcggcggca tgggcgtggc gctggcagtc gagcgcaaat aaggaagggg 3060
ttttccgggg ccgcgcgcgg ttggcgcgga cccggcgacg ataacgaagc caatcaagga 3120 ttttccgggg ccgcgcgcgg ttggcgcgga cccggcgacg ataacgaagc caatcaagga 3120
gtggacatga ctcagcgcat tgcgtatgtg accggcggca tgggtggtat cggaaccgcc 3180 gtggacatga ctcagcgcat tgcgtatgtg accggcggca tgggtggtat cggaaccgcc 3180
atttgccagc ggctggccaa ggatggcttt cgtgtggtgg ccggttgcgg ccccaactcg 3240 atttgccagc ggctggccaa ggatggcttt cgtgtggtgg ccggttgcgg ccccaactcg 3240
ccgcgccgcg aaaagtggct ggagcagcag aaggccctgg gcttcgattt cattgcctcg 3300 ccgcgccgcg aaaagtggct ggagcagcag aaggccctgg gcttcgattt cattgcctcg 3300
gaaggcaatg tggctgactg ggactcgacc aagaccgcat tcgacaaggt caagtccgag 3360 gaaggcaatg tggctgactg ggactcgacc aagaccgcat tcgacaaggt caagtccgag 3360
gtcggcgagg ttgatgtgct gatcaacaac gccggtatca cccgcgacgt ggtgttccgc 3420 gtcggcgagg ttgatgtgct gatcaacaac gccggtatca cccgcgacgt ggtgttccgc 3420
aagatgaccc gcgccgactg ggatgcggtg atcgacacca acctgacctc gctgttcaac 3480 aagatgaccc gcgccgactg ggatgcggtg atcgacacca acctgacctc gctgttcaac 3480
gtcaccaagc aggtgatcga cggcatggcc gaccgtggct ggggccgcat cgtcaacatc 3540 gtcaccaagc aggtgatcga cggcatggcc gaccgtggct ggggccgcat cgtcaacatc 3540
tcgtcggtga acgggcagaa gggccagttc ggccagacca actactccac cgccaaggcc 3600 tcgtcggtga acggggcagaa gggccagttc ggccagacca actactccac cgccaaggcc 3600
ggcctgcatg gcttcaccat ggcactggcg caggaagtgg cgaccaaggg cgtgaccgtc 3660 ggcctgcatg gcttcaccat ggcactggcg caggaagtgg cgaccaaggg cgtgaccgtc 3660
aacacggtct ctccgggcta tatcgccacc gacatggtca aggcgatccg ccaggacgtg 3720 aacacggtct ctccgggcta tatcgccacc gacatggtca aggcgatccg ccaggacgtg 3720
ctcgacaaga tcgtcgcgac gatcccggtc aagcgcctgg gcctgccgga agagatcgcc 3780 ctcgacaaga tcgtcgcgac gatcccggtc aagcgcctgg gcctgccgga agagatcgcc 3780
tcgatctgcg cctggttgtc gtcggaggag tccggtttct cgaccggcgc cgacttctcg 3840 tcgatctgcg cctggttgtc gtcggtttct cgaccggcgc cgacttctcg 3840
ctcaacggcg gcctgcatat gggctgacct gccggatcga taac 3884 ctcaacggcg gcctgcatat gggctgacct gccggatcga taac 3884
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