CN101455574A - Imaging system and method - Google Patents
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Abstract
本发明公开了一种成像系统,其包括:样本载物台,放置需成像的样本;射线源部分,发射射线;射线探测采集部分,接收射线图像;旋转控制部分,两端分别固定连接射线源部分与射线探测部分,带动射线源部分与射线探测部分旋转;计算机,向射线源部分、旋转控制部分及射线探测采集部分发送控制指令,以及接收射线探测采集部分接收到的图像并进行成像处理。本发明还相应地提供一种成像方法,输入期望的成像要求,计算相关参数,发送控制指令;射线源部分与射线探测部分固定在旋转控制部分的两端,根据控制指令,射线源部分发射射线,射线探测部分采集射线透射过样本后的投影图像;对投影图像进行成像处理。本发明解决了样本旋转带来的形变和运动伪影问题。
The invention discloses an imaging system, which includes: a sample stage for placing samples to be imaged; a ray source part for emitting rays; a ray detection and acquisition part for receiving ray images; a rotation control part with two ends respectively fixedly connected to the ray source The part and the ray detection part drive the ray source part and the ray detection part to rotate; the computer sends control instructions to the ray source part, the rotation control part and the ray detection acquisition part, and receives the images received by the ray detection acquisition part and performs imaging processing. The present invention also provides an imaging method correspondingly, inputting desired imaging requirements, calculating relevant parameters, and sending control instructions; the ray source part and the ray detection part are fixed at both ends of the rotation control part, and the ray source part emits rays according to the control instructions , the ray detection part collects the projection image after the ray is transmitted through the sample, and performs imaging processing on the projection image. The invention solves the problems of deformation and motion artifacts caused by sample rotation.
Description
技术领域 technical field
本发明涉及生物医学成像技术,特别是对小动物进行数字X射线透射成像、断层扫描成像以及三维立体成像的成像系统及方法。The invention relates to biomedical imaging technology, in particular to an imaging system and method for digital X-ray transmission imaging, tomography imaging and three-dimensional imaging of small animals.
背景技术 Background technique
数字X射线透射成像技术是目前较为成熟的医学成像技术,并已经成功应用于临床。该技术对于骨组织的研究有着很重要的作用,能提供小动物详细的结构信息。微型CT,也有人称之为显微CT,与医院用CT的区别主要是在空间分辨率上。医院用CT的空间分辨率一般为毫米数量级,而显微CT的空间分辨率可以达到微米数量级。Digital X-ray transmission imaging technology is a relatively mature medical imaging technology and has been successfully applied in clinical practice. This technique plays an important role in the study of bone tissue and can provide detailed structural information of small animals. Micro-CT, also known as micro-CT, differs from hospital-used CT mainly in spatial resolution. The spatial resolution of CT used in hospitals is generally on the order of millimeters, while the spatial resolution of micro-CT can reach the order of microns.
申请号为200510135935.1的中国发明专利申请公开了一种X-CT扫描系统,包括主控制及数据处理计算机、底座、物体转台及其机械控制装置、X射线发生装置和数据采集系统,其中探测器的探测器阵列相对于X射线发生装置的X射线源与物体转台中心连线垂直布置,且探测器阵列的一侧相对于X射线发生装置的X射线源与物体转台中心连线的延长线平齐或超出一部分,该超出部分的长度小于物体转台的半径。该CT系统的特点是样本旋转,而光源和探测器不动,这种成像方式在拍摄小动物的过程中,一旦动物样本发生移动,外形就会因运动扭曲而产生形变,这样在不断旋转投影的过程中,动物样本始终处于运动形变的状态,相对于动物静止的投影状态会产生明显的伪影,这种伪影称为运动伪影,这种运动伪影会给样本的拍摄效果带来很大影响。The Chinese invention patent application with the application number 200510135935.1 discloses an X-CT scanning system, including a main control and data processing computer, a base, an object turntable and its mechanical control device, an X-ray generating device, and a data acquisition system. The detector array is arranged perpendicular to the line connecting the X-ray source of the X-ray generating device and the center of the object turntable, and one side of the detector array is flush with the extension line of the line connecting the X-ray source of the X-ray generating device and the center of the object turntable Or exceed a part, and the length of this protruding part is less than the radius of object turntable. The characteristic of this CT system is that the sample rotates, but the light source and the detector do not move. In the process of shooting small animals in this imaging method, once the animal sample moves, the shape will be deformed due to motion distortion, so that the continuous rotating projection During the process, the animal sample is always in a state of motion and deformation. Compared with the static projection state of the animal, obvious artifacts will be produced. This kind of artifact is called motion artifact. big impact.
发明内容 Contents of the invention
有鉴于此,本发明的目的在于提供成像系统及方法,用于解决现有技术中存在的小动物CT成像过程中发生的形变和运动伪影问题。In view of this, the purpose of the present invention is to provide an imaging system and method for solving the problems of deformation and motion artifacts in the CT imaging process of small animals existing in the prior art.
本发明提供一种成像系统,其包括:The invention provides an imaging system, which includes:
样本载物台,用于放置需成像的样本;The sample stage is used to place the sample to be imaged;
射线源部分,用于发射射线;The ray source part is used to emit rays;
射线探测采集部分,用于接收射线图像;The ray detection acquisition part is used to receive the ray image;
旋转控制部分,该旋转控制部分两端分别固定连接所述射线源部分与射线探测部分,用于带动所述射线源部分与射线探测部分旋转;A rotation control part, the two ends of the rotation control part are fixedly connected to the radiation source part and the radiation detection part, and are used to drive the radiation source part and the radiation detection part to rotate;
计算机,用于向所述射线源部分、旋转控制部分及射线探测采集部分发送控制指令,以及接收所述射线探测采集部分接收到的图像并进行成像处理。The computer is used to send control instructions to the ray source part, the rotation control part and the ray detection and acquisition part, and to receive the images received by the ray detection and acquisition part and perform imaging processing.
本发明还提供一种成像方法,该方法包括:The present invention also provides an imaging method, the method comprising:
A、输入期望的成像要求,计算相关参数,发送控制指令;A. Input the desired imaging requirements, calculate relevant parameters, and send control instructions;
B、射线源部分与射线探测部分固定在旋转控制部分的两端,根据所述控制指令,射线源部分发射射线,射线探测部分采集射线透射过样本后的投影图像;B. The ray source part and the ray detection part are fixed at both ends of the rotating control part. According to the control instructions, the ray source part emits rays, and the ray detection part collects projection images after the rays pass through the sample;
C、对所述投影图像进行成像处理。C. Perform imaging processing on the projected image.
由上可知,本发明提供的成像系统和方法中,X射线探测器、载物台和X射线源由下至上依次排列,它们的中心位于同一直线上,X射线源和探测器被固定在旋转支架两端,围绕样本作圆周运动。这样,采用本发明的方法进行样本拍摄时,样本在数据采集过程中保持水平静止的自然形态,在X射线源和探测器围绕样品旋转采集数据的过程中,样本始终保持初始的形态,消除了样本旋转采集系统中由于运动而产生的小动物形变的运动伪影。As can be seen from the above, in the imaging system and method provided by the present invention, the X-ray detector, stage and X-ray source are arranged sequentially from bottom to top, their centers are located on the same straight line, and the X-ray source and detector are fixed on a rotating Both ends of the bracket move in a circle around the sample. In this way, when the method of the present invention is used to photograph the sample, the sample maintains a horizontally stationary natural form during the data collection process, and the sample always maintains the initial form during the data collection process when the X-ray source and the detector rotate around the sample, eliminating the Motion Artifacts of Small Animal Deformation Due to Movement in a Sample Rotation Acquisition System.
附图说明 Description of drawings
图1是本发明实施例中的成像系统结构图;FIG. 1 is a structural diagram of an imaging system in an embodiment of the present invention;
图2是本发明实施例中的射线源控制器的结构图;Fig. 2 is a structural diagram of a radiation source controller in an embodiment of the present invention;
图3是本发明实施例中的旋转机架的结构图;Fig. 3 is the structural diagram of the rotating frame in the embodiment of the present invention;
图4是本发明实施例中旋转机架上的平板探测器固定架和微焦点射线源固定架的俯视图;Fig. 4 is the top view of the flat panel detector fixed mount and the micro-focus ray source fixed mount on the rotating frame in the embodiment of the present invention;
图5是本发明实施例中成像方法的流程图;FIG. 5 is a flow chart of an imaging method in an embodiment of the present invention;
图6是本发明实施例中实验大鼠的透视投影图;Fig. 6 is the perspective projection diagram of experimental rat in the embodiment of the present invention;
图7是本发明实施例中在图5中平面位置上重建的一张断层图像;Fig. 7 is a tomographic image reconstructed on the plane position in Fig. 5 in the embodiment of the present invention;
图8是本发明实施例中对实验大鼠头部进行三维重建后立体绘制的效果图。Fig. 8 is an effect diagram of three-dimensional rendering of the experimental rat's head after three-dimensional reconstruction in the embodiment of the present invention.
具体实施方式 Detailed ways
本发明实施例提供了对小动物进行成像的系统和方法,利用光源和探测器旋转方式取代了样本旋转方式,保持样本静止,光源和探测器绕其旋转,解决了样本旋转带来的形变和运动伪影问题。The embodiment of the present invention provides a system and method for imaging small animals, which uses the rotation of the light source and the detector to replace the sample rotation, keeps the sample still, and the light source and the detector rotate around it, which solves the problem of deformation caused by the rotation of the sample. Motion artifact problem.
为使本发明的目的、技术方案和优点更加清楚,下面结合附图对本发明作进一步的详细描述。In order to make the object, technical solution and advantages of the present invention clearer, the present invention will be further described in detail below in conjunction with the accompanying drawings.
如图1所示,本发明实施例提供的成像系统具体包括:As shown in Figure 1, the imaging system provided by the embodiment of the present invention specifically includes:
计算机1,电机驱动器2,电动旋转机构3,射线源控制器4,微焦点X射线源5,数据采集设备6,平板探测器7,旋转机架8,样本载物台10。Computer 1 , motor driver 2 ,
微焦点X射线源5与射线源控制器4的一个接口相连,射线源控制器4的另一接口与计算机1的通信端口相连;平板探测器7与数据采集设备6相连,数据采集设备6通过数据传输线与计算机1相连。The
微焦点X射线源5和平板探测器7固定在旋转机架8的两端,旋转机架8安装在电动旋转机构3上,电动旋转机构3直接被固定在底座上,然后通过底座安放在地面上。电机驱动器2的一接口与电动旋转机构3相连,另一接口和计算机1的通信端口相连。The
样本载物台10直接被固定在底座上。The sample stage 10 is fixed directly on the base.
其中,in,
计算机1,用于设置并向射线源控制器4和电机驱动器2发送控制指令,并接收数据采集设备6发送的数字X射线图像,以及对该图像进行成像处理。The computer 1 is used for setting and sending control instructions to the radiation source controller 4 and the motor driver 2, and receiving the digital X-ray image sent by the data acquisition device 6, and performing imaging processing on the image.
电机驱动器2,通过通信串口与计算机1相连,用于接收计算机1发送的控制指令,根据计算机1发送的指令,通过驱动电缆驱动电动旋转机构3的转动,从而带动旋转机架8两端的微焦点X射线源5和平板探测器7的旋转。所述控制指令可以为设置旋转速度以及旋转步进数的指令,电机驱动器2解析串口指令后,根据控制指令中携带的旋转速度及步进数等信息驱动电动旋转机构3的转动。The motor driver 2 is connected to the computer 1 through the communication serial port, and is used to receive the control instruction sent by the computer 1, and according to the instruction sent by the computer 1, the rotation of the
电动旋转机构3,用于在电机驱动器的驱动下,带动其两端的微焦点X射线源5和平板探测器7的旋转。该电动旋转机构可以为步进电机或伺服电机。The
射线源控制器4,通过通信并口与计算机1相连,该通信并口可以为打印口。射线源控制器4用于接收计算机1发送的控制指令,控制微焦点X射线源5的供电电源的通和断,电源通则射线源发出射线,电源断则中断射线发射。当射线源控制器4接收到计算机1发送的微焦点X射线源5开的指令时,微焦点X射线源5发出射线,这时首先可以选择需要的微焦点X射线源5的焦点大小,在微焦点X射线源5焦点大小选定后选定射线管的电压值,最后在一定的范围内确定管电流值。The ray source controller 4 is connected to the computer 1 through a communication parallel port, which may be a printing port. The radiation source controller 4 is used to receive the control instructions sent by the computer 1, and control the on and off of the power supply of the
射线源控制器4的结构以及与微焦点X射线源5的连接方式如图2所示,其实现原理为:通过并口的TTL电平,驱动继电器的绕组线圈,接通或者关断220V供电电路。该结构包括以下部分:The structure of the radiation source controller 4 and the connection mode with the
计算机通讯并口11,用于接收计算机1发送的代表控制指令的高低电平;The computer communication parallel port 11 is used to receive the high and low levels of the representative control command sent by the computer 1;
数字反相器12,用于将计算机1发出的高电平转变为低电平,低电平转变为高电平。为什么要进行反相呢?The
直流电源13,用于提供数字反向器12和三极管14所需电压。The DC power supply 13 is used to provide the voltage required by the
三极管14,三极管14的基极连接到反相器12,接收反相器12反向驱动后的高低电平,三极管14的集电极连接5V直流电源13。在三极管导通的情况下,将直流电源13的电流放大,触发继电器17和信号指示灯。The
发光二极管15,发光二极管15和继电器17的电磁绕组并联,作为信号指示灯,用来指示继电器触点开关的通断状况,如果触点开关导通,则发光二极管15发光。Light-emitting diode 15, the electromagnetic winding of light-emitting diode 15 and
交流电源16,在继电器17开的情况下,为微焦点射线源通电。The
继电器17,用于通过继电器的触发连通微焦点射线源的电路,继电器17与微焦点X射线源5和220V交流电源16共同构成一个回路,只要继电器接通,射线源就开始工作;继电器断开,射线源就停止工作。The
当计算机发出微焦点射线源开的高电平时,通过信号线接通数字反向器输出低电平,此时三极管导通将直流电源电流放大,触发继电器和微焦点射线源开关的指示灯,继电器触发后会连通微焦点射线源所在的交流电路,此时微焦点射线源发出射线;反之当计算机发出微焦点射线源关的低电平时,通过信号线接通数字反向器输出高电平,此时三极管不被导通,继电器在低电流的直流电源下不工作,微焦点射线源所在交流电路处于断路状态,微焦点射线源不发射X射线。When the computer sends out the high level of the micro-focus ray source, the digital inverter is connected through the signal line to output a low level, and the triode is turned on at this time to amplify the DC power supply current, triggering the indicator light of the relay and the micro-focus ray source switch, After the relay is triggered, it will connect to the AC circuit where the micro-focus ray source is located. At this time, the micro-focus ray source emits rays; otherwise, when the computer sends out the low level of the micro-focus ray source, the digital inverter is connected through the signal line to output a high level. At this time, the triode is not turned on, the relay does not work under the low-current DC power supply, the AC circuit where the micro-focus ray source is located is in an open circuit state, and the micro-focus ray source does not emit X-rays.
微焦点X射线源5,用于在射线源控制器4的控制下,向小动物样本发射X射线。微焦点X射线源5的焦点在1微米—100微米范围内,管电压在10千伏—100千伏范围内。The
数据采集设备6,通过PCI插槽与计算机1相连,并通过数字接口与平板探测器7相连,一方面接收计算机发送的平板探测器7的连通、平板探测器的预处理、平板探测器的数据采集等控制指令,另一方面接收平板探测器7探测到的X射线透射过物体后的投影图像,并发送给计算机1。这样,计算机1就可以通过数据采集设备6控制平板探测器的工作,并接收探测器采集的数据。The data acquisition device 6 is connected to the computer 1 through the PCI slot, and is connected to the flat panel detector 7 through a digital interface. On the one hand, it receives the connection of the flat panel detector 7 sent by the computer, the preprocessing of the flat panel detector, and the data of the flat panel detector. Acquisition and other control commands, on the other hand, receive the projection image of the X-ray detected by the flat panel detector 7 after it passes through the object, and send it to the computer 1 . In this way, the computer 1 can control the work of the flat panel detector through the data acquisition device 6 and receive the data collected by the detector.
平板探测器7,平板探测器7和微焦点X射线源5一起被固定在旋转机架8的两端,用于探测微焦点X射线源5发出的X射线,该射线透射过样品载物台10上面的样品9后被平板探测器7所接收,再通过数据传输线传送到数据采集设备6。该平板探测器7可以是非晶硅平板探测器或非晶硒平板探测器。The flat panel detector 7, the flat panel detector 7 and the
旋转机架8,两端分别固定连接微焦点X射线源5和平板探测器7,中部与电动旋转机构3相连,能够在电动旋转机构3的带动下旋转。在对小动物样本的成像过程中,微焦点X射线源5和平板探测器7围绕旋转机架8作圆周运动,从而对样本多角度成像,样本静止又可以消除样本运动带来的运动伪影。The rotating frame 8 is fixedly connected to the
旋转机架8的结构如图3和图4所示,旋转机架8主要是用40mm*40mm型号为FSA-181A的型材搭建而成,具体尺寸如图3中标注,单位:米。主要包括竖直旋转支撑架、微焦点射线源固定架和平板探测器固定架,在图3中左图(a)是旋转机架的正视图,右图(b)是旋转机架的侧视图,图4中的A和B分别为平板探测器固定架和微焦点射线源固定架的俯视图。竖直旋转支撑架、微焦点射线源固定架和平板探测器固定架之间是通过M8的T形螺母固定。麻烦将图4中的虚线重画一下,否则打印出来不清楚The structure of the rotating frame 8 is shown in Fig. 3 and Fig. 4. The rotating frame 8 is mainly built with a 40mm*40mm type FSA-181A profile, and the specific dimensions are marked in Fig. 3, unit: meter. It mainly includes a vertical rotating support frame, a micro-focus ray source fixing frame and a flat panel detector fixing frame. In Figure 3, the left figure (a) is a front view of the rotating frame, and the right figure (b) is a side view of the rotating frame , A and B in Fig. 4 are the top views of the flat panel detector fixing frame and the micro-focus ray source fixing frame respectively. The vertical rotating support frame, the micro-focus ray source fixing frame and the flat panel detector fixing frame are fixed by M8 T-shaped nuts. Please redraw the dotted line in Figure 4, otherwise the printout is not clear
样本载物台10,用于放置小动物样本。在拍摄成像时,被测小动物样本9平卧于样本载物台10上,样品载物台10是一个三维平移台组成,因此样本载物台的位置可以调整,目的是为了保证样本9处于微焦点X射线源5和平板探测器7的旋转中心。The sample stage 10 is used for placing small animal samples. When shooting and imaging, the small animal sample 9 to be tested lies flat on the sample stage 10, and the sample stage 10 is composed of a three-dimensional translation platform, so the position of the sample stage can be adjusted, and the purpose is to ensure that the sample 9 is in the The center of rotation of the
通过以上成像系统,利用光源和探测器旋转方式取代了样本旋转方式,保持样本静止,光源和探测器绕其旋转,解决了样本旋转带来的形变和运动伪影问题。本发明为获取更为理想的小动物影像创造了有利条件,为研究小动物结构信息提供了有效的研究工具。Through the above imaging system, the rotation of the sample is replaced by the rotation of the light source and the detector, the sample is kept still, and the light source and the detector rotate around it, which solves the problem of deformation and motion artifacts caused by the rotation of the sample. The invention creates favorable conditions for obtaining more ideal small animal images, and provides an effective research tool for studying the structure information of small animals.
图5是本发明实施例提供的成像方法的流程图,包括以下步骤:Fig. 5 is a flowchart of an imaging method provided by an embodiment of the present invention, including the following steps:
步骤501、用户输入期望的成像要求。主要是由用户向计算机输入必要的参数,包括样本长度、所需分辨率等,样本长度是需要成像物体的总长度,所需分辨率是最终重建切片图象的空间分辨率。Step 501, the user inputs desired imaging requirements. The user mainly inputs necessary parameters to the computer, including sample length and required resolution, etc. The sample length is the total length of the object to be imaged, and the required resolution is the spatial resolution of the final reconstructed slice image.
步骤502、计算机根据成像要求计算相关参数。比如放大倍率、旋转步进数、平移步进数等等,放大倍率是指微焦点射线源、探测器间的距离与微焦点射线源、成像物体间距离的比值,旋转步进数是指旋转支架每步旋转的角度,平移步进数是指旋转支架需要平移的距离,假设需要成像的物体长度为20cm,而系统每次只能成像的长度为5cm,那么只能通过4次平移旋转支架每次平移5cm来实现成像20cm的长度。
步骤503、打开射线源。计算机控制X射线源发射X射线,并且在整个数据采集过程中射线源一直打开。Step 503, turn on the ray source. The computer controls the X-ray source to emit X-rays, and the source remains on throughout the data acquisition process.
步骤504、旋转机架按计算机预先设定的旋转步进数旋转一个步进。
步骤505、采集一帧X射线的投影图。
步骤506、拍摄是否完成?如果还未完成,则执行步骤504;否则执行下一步。
步骤507、关闭射线源,拍摄结束,存储采集的数据,计算机对这些图像数据进行成像处理。
下面以一个具体拍摄实验为例,阐述以上实施例的效果。该实验的生物材料是SD大鼠,除去尾部长度约为100mm。动物饲养和实验严格按照中华人民共和国《实验动物管理条例》要求进行。对大鼠进行麻醉后平放到载物台上。调整载物台的位置,使得成像区域正好对准大鼠的头部。A specific shooting experiment is taken as an example below to illustrate the effects of the above embodiments. The biological material for this experiment was SD rats, the length of which was about 100 mm excluding the tail. Animal breeding and experiments were carried out in strict accordance with the "Regulations on the Administration of Experimental Animals" of the People's Republic of China. Rats were anesthetized and placed flat on the stage. Adjust the position of the stage so that the imaging area is just aligned with the head of the rat.
X射线源电压为70千伏,电流为0.3毫安;成像速度为1帧/秒。图6是一张实验大鼠的透视投影图,大鼠头部的骨骼和轮廓都十分清晰,亮度和对比度都很理想。图6是图5中平面位置上重建的一张断层图像,从断层图中可以清晰地区分出大鼠的骨骼和软组织,载物台的影像也很清晰。图8是采集多帧图像后,对大鼠头部进行三维重建后立体绘制的效果图,头骨、脊椎、肩胛、前爪都很清晰。The X-ray source voltage is 70 kV, the current is 0.3 mA; the imaging speed is 1 frame/second. Figure 6 is a perspective projection diagram of an experimental rat. The bones and contours of the rat's head are very clear, and the brightness and contrast are ideal. Fig. 6 is a tomographic image reconstructed on the plane position in Fig. 5. The bone and soft tissue of the rat can be clearly distinguished from the tomographic image, and the image of the stage is also very clear. Figure 8 is a three-dimensional rendering of the rat's head after three-dimensional reconstruction after collecting multiple frames of images. The skull, spine, scapula, and front paws are very clear.
由上可知,本发明提供的成像系统和方法,X射线探测器、载物台和X射线源由下至上依次排列,它们的中心位于同一直线上,X射线源和探测器被固定在旋转支架两端,围绕样本作圆周运动。这样,采用本发明的方法进行样本拍摄时,样本在数据采集过程中保持水平静止的自然形态,在X射线源和探测器围绕样品旋转采集数据的过程中,样本始终保持初始的形态,相比样本旋转、X射线源和探测器静止的CT系统来讲,消除了样本旋转采集系统中由于运动而产生的小动物形变的运动伪影。As can be seen from the above, in the imaging system and method provided by the present invention, the X-ray detector, stage and X-ray source are arranged sequentially from bottom to top, their centers are located on the same straight line, and the X-ray source and detector are fixed on the rotating bracket Both ends, make a circular motion around the sample. Like this, when adopting the method of the present invention to carry out sample photographing, the sample maintains the natural form of horizontal stillness in the data collection process, in the process that the X-ray source and the detector rotate around the sample to collect data, the sample keeps the initial form all the time, compared with For a CT system in which the sample rotates, the X-ray source and the detector are stationary, the motion artifact of small animal deformation caused by movement in the sample rotation acquisition system is eliminated.
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