CN100384990C - Method for constructing non-virulent strain of infectious bursal disease virus - Google Patents
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Abstract
本发明公开了一种传染性法氏囊病病毒无毒力毒株构建方法。方法的步骤为:1)性法氏囊病病毒基因组A、B节段RNA的抽提及其cDNA全长的克隆;2)VP5基因缺失的基因组A节段全长序列的获得及A、B节段感染性克隆的构建;3)上述感染性克隆共转染培养细胞,拯救出VP5基因缺失的传染性法氏囊病病毒ANhe2株;该方法比传统的细胞传代致弱的方法更加稳定,并有效地保留了病毒的免疫原性。本发明提供了一种VP5基因缺失的传染性法氏囊病病毒(IBDV)ANhe2株,该病毒不表达VP5蛋白,尚失对鸡的致病力的同时,保留了良好的免疫原性,且毒力不返祖。该病毒制备简单、使用方便。ANhe2毒株的其他特性与传统的弱毒疫苗病毒株一致。The invention discloses a method for constructing an avirulent strain of infectious bursal disease virus. The steps of the method are as follows: 1) extraction of the RNA of the A and B segments of the bursal disease virus genome and the cloning of the full-length cDNA thereof; Construction of segmental infectious clones; 3) The above-mentioned infectious clones were co-transfected into cultured cells, and the infectious bursal disease virus ANhe2 strain with VP5 gene deletion was rescued; this method is more stable than traditional cell passage attenuation methods, And effectively retain the immunogenicity of the virus. The invention provides a VP5 gene-deleted infectious bursal disease virus (IBDV) ANhe2 strain, the virus does not express VP5 protein, loses pathogenicity to chickens, and retains good immunogenicity, and Virulence does not return to the ancestors. The virus is simple to prepare and convenient to use. Other characteristics of the ANhe2 strain were consistent with traditional attenuated vaccine strains.
Description
技术领域 technical field
本发明属于生物技术领域,涉及一种传染性法氏囊病病毒无毒力毒株构建方法。The invention belongs to the field of biotechnology and relates to a method for constructing an avirulent strain of infectious bursal disease virus.
背景技术 Background technique
传染性法氏囊病(Infectious bursal disease,IBD)是由传染性法氏囊病病毒(Infectious bursal disease virus,IBDV)引起的急性、高度接触性传染病。IBDV主要侵害雏鸡的中枢免疫器官法氏囊,导致免疫抑制和免疫缺陷,同时造成其它疫苗的免疫失败,是目前危害世界养禽业的主要传染病之一。IBDV是双链RNA病毒,属于双RNA病毒科(Biranviridae)禽双RNA病毒属(Avibirnavirus),其基因组由A、B两个节段组成。B节段(约2.8kb)编码VP1蛋白,为RNA依赖的RNA聚合酶。A节段(约3.3kb)具有两个相互重叠的开放阅读框架(ORF),下游的ORF1编码的前体蛋白VP2/4/3可进一步剪切加工为VP2、VP4、VP3。其中VP2是病毒的主要宿主保护性抗原,与病毒的抗原变异和毒力相关;VP4为一种丝氨酸蛋白酶,负责前体蛋白VP2/4/3的自我剪切;VP3则是病毒的结构蛋白之一,具有群特异性抗原。上游的ORF2(438bp)编码非结构蛋白VP5(约15kDa),该蛋白非病毒复制所必需,与病毒致病性有关。Infectious bursal disease (IBD) is an acute, highly contagious infectious disease caused by infectious bursal disease virus (IBDV). IBDV mainly invades the central immune organ of chicks, the bursa of Fabricius, leading to immunosuppression and immunodeficiency, and at the same time causing immune failure of other vaccines. It is currently one of the main infectious diseases that endanger the poultry industry in the world. IBDV is a double-stranded RNA virus belonging to the genus Avibirnavirus of the family Biranviridae, and its genome consists of two segments, A and B. The B segment (about 2.8kb) encodes the VP1 protein, which is an RNA-dependent RNA polymerase. The A segment (about 3.3kb) has two overlapping open reading frames (ORFs), and the downstream ORF1 encodes the precursor protein VP2/4/3, which can be further cut and processed into VP2, VP4, and VP3. Among them, VP2 is the main host protective antigen of the virus, which is related to the antigenic variation and virulence of the virus; VP4 is a serine protease responsible for the self-cleavage of the precursor protein VP2/4/3; VP3 is one of the structural proteins of the virus One, with group-specific antigens. The upstream ORF2 (438bp) encodes a non-structural protein VP5 (about 15kDa), which is not necessary for viral replication and is related to viral pathogenicity.
将IBDV D78弱毒株ORF A2的起始密码ATG换成AGG(编码Arg),其cRNA转染鸡胚细胞(CEC)获得无VP5表达的缺陷型病毒IBDV/VP5-可正常感染Vero细胞,提示VP5在IBDV复制并非必要。Yao等用VP5缺陷的D78弱毒株(rD78NSΔ)及亲本病毒rD78分别感染3周龄SPF鸡,前者即使加大接种剂量也不引起任何临床症状与法氏囊组织损伤,后者相反;并且两者诱生IBDV中和抗体的能力相似。进一步的研究表明,将VP5置于CMV启动子下游分别转染鸡B淋巴细胞(RP9)和鸡胚成纤维,结果VP5的表达诱导了RP9和鸡胚成纤维的细胞凋亡,而缺失了VP5拯救的病毒引起的细胞病变比野生型轻,复制速度比野生型慢,细胞上清液的病毒量比野生型降低30倍,缺失了VP5的病毒大大降低了细胞溶解释放病毒的能力,可见VP5具有很强的细胞毒性,与成熟病毒从胞内向胞外释放及病毒的致病性有关。因此对VP5相关生物学特性进行研究,将有助于我们进一步了解IBDV的致病和免疫机制。The start code ATG of IBDV D78 attenuated strain ORF A2 was replaced with AGG (encoding Arg), and its cRNA was transfected into chicken embryo cells (CEC) to obtain a defective virus IBDV/VP5 without VP5 expression, which could normally infect Vero cells, suggesting that VP5 Replication in IBDV is not necessary. Yao et al. infected 3-week-old SPF chickens with VP5-deficient D78 attenuated strain (rD78NSΔ) and parental virus rD78 respectively. The ability to induce IBDV neutralizing antibodies was similar. Further studies showed that VP5 was placed downstream of the CMV promoter to transfect chicken B lymphocytes (RP9) and chicken embryo fibroblasts, respectively. As a result, the expression of VP5 induced the apoptosis of RP9 and chicken embryo fibroblasts, while the deletion of VP5 The rescued virus causes milder cytopathy than the wild type, the replication speed is slower than the wild type, and the virus amount in the cell supernatant is 30 times lower than that of the wild type. The virus lacking VP5 greatly reduces the ability of the cell to lyse and release the virus. It can be seen that VP5 It has strong cytotoxicity, which is related to the release of mature virus from intracellular to extracellular and the pathogenicity of the virus. Therefore, research on the biological characteristics of VP5 will help us further understand the pathogenic and immune mechanisms of IBDV.
发明内容 Contents of the invention
本发明的目的是提供一种一种传染性法氏囊病病毒无毒力毒株构建方法。The object of the present invention is to provide a method for constructing an avirulent strain of infectious bursal disease virus.
方法的步骤为:The steps of the method are:
1)性法氏囊病病毒基因组A、B节段RNA的抽提及其cDNA全长的克隆;1) Extraction of the RNA of the A and B segments of the bursal disease virus genome and the cloning of its full-length cDNA;
2)VP5基因缺失的基因组A节段全长序列的获得及A、B节段感染性克隆的构建;2) Acquisition of the full-length sequence of the A segment of the genome with VP5 gene deletion and the construction of infectious clones of the A and B segments;
3)上述感染性克隆共转染培养细胞,拯救出VP5基因缺失的传染性法氏囊病病毒ANhe2株;3) The above-mentioned infectious clones were co-transfected into cultured cells, and the infectious bursal disease virus ANhe2 strain with VP5 gene deletion was rescued;
所述的传染性法氏囊病病毒基因组A、B节段RNA的抽提及其cDNA全长的克隆:收集细胞培养的HZ2株传染性法氏囊病病毒,抽提其基因组A、B节段RNA,用长距离精确RT-PCR扩增基因组A、B节段cDNA全长,克隆于pGEM-T easy,获得重组载体pGEM-T-A/HZ2和pGEM-T-B/HZ2,并进行序列测定。The extraction of the RNA of the A and B segments of the infectious bursal disease virus genome and the cloning of its full-length cDNA: collect the HZ2 strain of infectious bursal disease virus cultured in cells, and extract the A and B segments of the genome Amplify the full-length cDNA of genome A and B segments by long-distance precise RT-PCR, clone them in pGEM-T easy, obtain recombinant vectors pGEM-T-A/HZ2 and pGEM-T-B/HZ2, and perform sequence determination.
VP5基因缺失的基因组A节段全长序列的获得及A、B节段感染性克隆的构建:回收pGEM-T-A/HZ2经NdeI酶切后的长片段并重新自连获得pGEM-T-AN;以上下游突变引物The2S:AGATCAGACAAACGATCGCAG和TheA:GcTaGcAATGATAGCGTTATAGAAG、TaKaRa MutanBEST Kit进行PCR介导的定点突变,获得3603bp的线性化载体并直接自身连接后,获得含有点突变和片段删除的突变体pGEM-T-The2,并测序证实。将pGEM-T-The2 623bp的EcoR I/Nde I酶切片段与来自于pGEM-T-A/HZ2的2615bp的Nde I/Kpn I片段线性连接后,直接插入经EcoR I/Kpn I酶切的pC I载体,获得最终用于转染的真核表达质粒pC I-ANhe2,其保藏号为CGMCC No.1507,以重组质粒pGEM-T-B/HZ2为骨架,以EV5:CGCCCTTAAGACCGGTCGaTAtcGGAACGAAG和B3:ATTTCTAGAGGGGGCCCCCGCAGGCGAA为突变引物,使用Pfu聚合酶扩增出573bp的突变片段,同时对573bp片段和pGEM-T-B/HZ2进行Afl II/Xba I双酶切,用573bp片段替换pGEM-T-B/HZ2的对应部分,得到含有EcoRV标记的B节段重组子pGEM-T-mB/HZ2,测序证实后,以EcoRI/XbaI/Pvu I酶切pGEM-T-mB/HZ2,回收2833bp片段,与经过EcoRI/XbaI酶切的pCI载体连接,获得用于转染的真核表达质粒pCI-mB/HZ2,其保藏号为CGMCC No.1506。Obtaining the full-length sequence of segment A of the genome with VP5 gene deletion and the construction of infectious clones of segments A and B: recovering the long fragment of pGEM-T-A/HZ2 digested with NdeI and re-self-ligating to obtain pGEM-T-AN; The above downstream mutation primers The2S: AGATCAGACAAACGATCGCAG and TheA: GcTaGcAATGATAGCGTTATAGAAG, TaKaRa MutanBEST Kit were used for PCR-mediated site-directed mutagenesis to obtain a 3603bp linearized vector and directly self-ligated to obtain the mutant pGEM-T-The2 containing point mutations and fragment deletions , and confirmed by sequencing. After the 623bp EcoR I/Nde I fragment of pGEM-T-The2 was linearly ligated with the 2615bp Nde I/Kpn I fragment from pGEM-T-A/HZ2, it was directly inserted into pC I digested by EcoR I/Kpn I Vector, obtain the final eukaryotic expression plasmid pC I-ANhe2 for transfection, its preservation number is CGMCC No.1507, with the recombinant plasmid pGEM-T-B/HZ2 as the backbone, with EV5: CGCCCTTAAGACCGGTCGaTAtcGGAACGAAG and B3: ATTTCTAGAGGGGGCCCCCGCAGGCGAA as mutation primers, Use Pfu polymerase to amplify a 573bp mutant fragment, perform Afl II/Xba I double enzyme digestion on the 573bp fragment and pGEM-T-B/HZ2 at the same time, replace the corresponding part of pGEM-T-B/HZ2 with the 573bp fragment, and obtain the EcoRV-labeled fragment Segment B recombinant pGEM-T-mB/HZ2, after sequencing confirmation, pGEM-T-mB/HZ2 was digested with EcoRI/XbaI/Pvu I, the 2833bp fragment was recovered, and ligated with the pCI vector digested with EcoRI/XbaI, The eukaryotic expression plasmid pCI-mB/HZ2 used for transfection was obtained, and its preservation number is CGMCC No.1506.
将上述感染性克隆共转染培养细胞,拯救出VP5基因缺失的传染性法氏囊病病毒ANhe2株:在脂质体Lipofectamine 2000介导下,以pCI-ANhe2/pCI-mB共转染80%融合度的鸡胚成纤维细胞,通过细胞病变、模拟病毒传代、分别以兔抗IBDV血清和兔抗IBDV VP5血清为一抗的间接免疫荧光试验、电镜观察病毒粒子,RT-PCR和酶切鉴定等实验证实拯救出VP5基因缺失的传染性法氏囊病病毒,将该病毒命名为ANhe2株。Co-transfect the cultured cells with the above-mentioned infectious clones, and rescue the infectious bursal disease virus ANhe2 strain with VP5 gene deletion: under the mediation of
附图说明 Description of drawings
图1是本发明提供的传染性法氏囊病病毒(IBDV)基因组A、B节段cDNA扩增和克隆过程及图谱。Fig. 1 is the infectious bursal disease virus (IBDV) genome A, B segment cDNA amplification and cloning process and map provided by the present invention.
图2是本发明提供的传染性法氏囊病病毒(IBDV)基因组A节段RT-PCR鉴定图谱。Fig. 2 is a RT-PCR identification map of the infectious bursal disease virus (IBDV) genome segment A provided by the present invention.
图3是本发明提供的传染性法氏囊病病毒(IBDV)基因组B节段RT-PCR鉴定图谱。Fig. 3 is the RT-PCR identification map of the infectious bursal disease virus (IBDV) genome segment B provided by the present invention.
图4是本发明提供的传染性法氏囊病病毒(IBDV)的基因组A节段突变体及其真核表达质粒的构建过程及图谱。Fig. 4 is the construction process and map of the genome segment A mutant of infectious bursal disease virus (IBDV) and its eukaryotic expression plasmid provided by the present invention.
图5是本发明提供的传染性法氏囊病病毒(IBDV)的基因组A节段突变体的测序情况。Fig. 5 is the sequencing situation of the mutant of the genome segment A of infectious bursal disease virus (IBDV) provided by the present invention.
图6是本发明提供的含有传染性法氏囊病病毒(IBDV)的基因组A节段突变体的真核表达质粒pCI-ANhe2的酶切鉴定图谱。Fig. 6 is an enzyme digestion identification map of the eukaryotic expression plasmid pCI-ANhe2 containing the genome A segment mutant of infectious bursal disease virus (IBDV) provided by the present invention.
图7是本发明提供的传染性法氏囊病病毒(IBDV)的基因组B节段突变体的构建过程及图谱。Fig. 7 is the construction process and map of the genome B segment mutant of infectious bursal disease virus (IBDV) provided by the present invention.
图8是本发明提供的传染性法氏囊病病毒(IBDV)的基因组B节段突变体的测序情况。Fig. 8 is the sequencing situation of the genome B segment mutant of infectious bursal disease virus (IBDV) provided by the present invention.
图9是本发明提供的含有传染性法氏囊病病毒(IBDV)的基因组B节段突变体的真核表达质粒pCI-mB的酶切鉴定图谱。Fig. 9 is an enzyme digestion identification map of the eukaryotic expression plasmid pCI-mB containing the genome segment B mutant of infectious bursal disease virus (IBDV) provided by the present invention.
图10是本发明提供的传染性法氏囊病病毒(IBDV)基因缺失株ANhe2株的细胞病变效应观察(100×)。Figure 10 is the observation of the cytopathic effect of the infectious bursal disease virus (IBDV) gene deletion strain ANhe2 strain provided by the present invention (100×).
图11是本发明提供的传染性法氏囊病病毒(IBDV)基因缺失株ANhe2株细胞培养物的间接免疫荧光试验观察病毒结构蛋白与非结构蛋白的表达情况(100×)。Figure 11 shows the expression of virus structural and non-structural proteins observed by indirect immunofluorescence test of the infectious bursal disease virus (IBDV) gene deletion strain ANhe2 strain cell culture provided by the present invention (100×).
具体实施方式 Detailed ways
2005年10月25日保藏于中国微生物菌种保藏管理委员会普通微生物中心的大肠埃希氏菌(Escherichia coli),保藏号为CGMCCNO1506和CGMCCNO1507。On October 25, 2005, the Escherichia coli (Escherichia coli) was preserved in the General Microorganism Center of China Microbiological Culture Collection Management Committee, and the preservation numbers are CGMCCNO1506 and CGMCCNO1507.
实施例1:Example 1:
本实施例描述了本发明提供的传染性法氏囊病病毒(IBDV)基因组A、B节段全长序列的获得方法,长距离RT-PCR扩增并克隆IBDV双节段基因组的整个实验过程如图1所示。This example describes the method for obtaining the full-length sequence of the A and B segments of the infectious bursal disease virus (IBDV) genome provided by the present invention, and the entire experimental process of long-distance RT-PCR amplification and cloning of the IBDV double-segment genome As shown in Figure 1.
(一)RT-PCR扩增传染性法氏囊病病毒(IBDV)HZ2株基因组A、B节段全长序列(1) RT-PCR amplification of the full-length sequences of the genome segments A and B of the infectious bursal disease virus (IBDV) HZ2 strain
收集传染性法氏囊病病毒(IBDV)HZ2株的鸡胚成纤维(鸡胚成纤维)细胞培养液反复冻融3次;5000rpm,4℃,5min离心,取上清;14000rpm,4℃,5min离心,取上清;上清用漏斗加至透析袋中,置于50%聚乙二醇(PEG)中,置4℃过夜,浓缩100倍;用移液器吸出浓缩后的病毒液,-20℃保存备用。Collect the chicken embryo fibroblast (chicken embryo fibroblast) cell culture medium of infectious bursal disease virus (IBDV) HZ2 strain repeatedly freeze-thawed 3 times; 5000rpm, 4 ℃, 5min centrifugation, take the supernatant; Centrifuge for 5 minutes to take the supernatant; add the supernatant to the dialysis bag with a funnel, place it in 50% polyethylene glycol (PEG), put it at 4°C overnight, and concentrate it 100 times; suck out the concentrated virus solution with a pipette, Store at -20°C for later use.
取200μl透析后的病毒液,加入一新的用DEPC处理过的0.5ml eppendorf管中;分别加入SDS和蛋白酶K至终浓度为0.5%和1mg/ml,50℃,消化2hrs;分别用等体积的酚/氯仿/异戊醇(25/24/1)、氯仿/异戊醇(24/1)抽提一次,离心取上清,加入3M NaAc至终浓度为0.3M,再加入650ml冰冷无水乙醇,上下颠倒混匀,-20℃过夜,沉淀RNA;12000rpm,4℃,离心10min,沉淀用预冷的75%乙醇漂洗;室温挥发乙醇,视沉淀量加入适量DEPC处理水,轻轻吹打混匀;经1%琼脂糖凝胶电泳鉴定后,-20℃保存备用。Take 200μl of the dialyzed virus solution and add it to a new 0.5ml eppendorf tube treated with DEPC; add SDS and proteinase K to the final concentration of 0.5% and 1mg/ml respectively, digest at 50°C for 2hrs; phenol/chloroform/isoamyl alcohol (25/24/1) and chloroform/isoamyl alcohol (24/1) to extract once, centrifuge to get the supernatant, add 3M NaAc to a final concentration of 0.3M, then add 650ml ice-cold anhydrous Water and ethanol, mix upside down, -20°C overnight, precipitate RNA; 12000rpm, 4°C, centrifuge for 10min, rinse the precipitate with pre-cooled 75% ethanol; evaporate ethanol at room temperature, add appropriate amount of DEPC-treated water depending on the amount of precipitation, and gently pipette Mix well; after identification by 1% agarose gel electrophoresis, store at -20°C for later use.
针对基因组A、B节段全长序列分别设计引物,见表1,A5/A3用于扩增A节段全长序列,B5/B3用于扩增B节段全长序列。所有引物均用DEPC处理水稀释至25μM,-20℃保存备用。Primers were designed for the full-length sequences of the A and B segments of the genome, as shown in Table 1. A5/A3 was used to amplify the full-length sequence of the A segment, and B5/B3 was used to amplify the full-length sequence of the B segment. All primers were diluted to 25 μM with DEPC-treated water and stored at -20°C for future use.
表1传染性法氏囊病病毒基因组A、B节段cDNA扩增用引物序列Table 1 Infectious Bursal Disease Virus Genome A, B Segment cDNA Amplification Primer Sequence
使用前以下各种成分混匀并短暂离心:5μl病毒RNA基因组悬液,2μl反转录引物(2.5μM),2μl 10×PCR buffer,2μl MgCl2(25mM),1μl dNTP(10mM),2μl DTT(0.1M);98℃,5min,立即冰淬灭1min;50℃,5min;加1μl(200U)MMLV反转录酶至管内,混匀,50℃,50min;70℃,15min终止反应,冰淬灭;立即进行PCR反应;或冷冻保存。按照Roche公司Expand HighFidelity PCR System的操作指南进行PCR反应,以反转录合成的第一链为模板,PCR反应参数为94℃预变性3min,94℃变性15sec,60℃退火30sec,68℃延伸5min;循环30次,72℃延伸10min。反应完毕后取1~21%琼脂糖凝胶电泳检测,结果得到约3.3kb的A节段cDNA(见图2。1,DNA maker;2 & 3,A节段cDNA)和2.8kb的B节段cDNA(见图3。M,DNA maker;1,B节段cDNA)。Mix and briefly centrifuge the following components before use: 5μl viral RNA genome suspension, 2μl reverse transcription primer (2.5μM), 2μl 10×PCR buffer, 2μl MgCl 2 (25mM), 1μl dNTP (10mM), 2μl DTT (0.1M); 98°C, 5min, immediately quenched on ice for 1min; 50°C, 5min; add 1μl (200U) MMLV reverse transcriptase to the tube, mix well, 50°C, 50min; 70°C, 15min to stop the reaction, ice Quench; run PCR reaction immediately; or freeze. The PCR reaction was carried out according to the operation guide of the Expand High Fidelity PCR System of Roche Company, using the first strand synthesized by reverse transcription as a template, and the PCR reaction parameters were pre-denaturation at 94°C for 3min, denaturation at 94°C for 15sec, annealing at 60°C for 30sec, and extension at 68°C for 5min ; Cycle 30 times, extend at 72°C for 10 min. After the reaction was completed, 1-21% agarose gel electrophoresis was used for detection, and the result was about 3.3 kb segment A cDNA (see Figure 2. 1, DNA maker; 2 & 3, A segment cDNA) and 2.8 kb segment B segment cDNA (see Figure 3. M, DNA maker; 1, segment B cDNA).
(二)IBDV HZ2株基因组A、B节段全长序列的克隆(2) Cloning of the full-length sequence of the A and B segments of the genome of the IBDV HZ2 strain
割胶回收PCR产物直接连接到pGEM-T easy载体(Promega公司)上。具体按照说明书进行,在0.5ml离心管中,依次加入以下试剂:2×Buffer 5μl,pGEM-T easy 1μl,回收的PCR产物4μl,T4DNA liagase 1μl,室温连接1h,转化大肠杆菌HD5α,涂布含氨苄青霉素的LB平板,挑取单菌落,以LB培养基过夜扩大培养,抽提质粒DNA,进行PCR和酶切鉴定。为进一步证实序列的正确性,每个节段各选3个独立的阳性克隆进行测序。测序用引物步进法,在ABI3730测序仪上进行。对测序正确的克隆分别命名为pGEM-T-A/HZ2和pGEM-T-B/HZ2。测序结果表明,HZ2株的A节段共有3259bp,序列如下:The PCR product recovered from rubber tapping was directly connected to the pGEM-T easy vector (Promega). Specifically, follow the instructions. In a 0.5ml centrifuge tube, add the following reagents in sequence: 2×Buffer 5μl, pGEM-T easy 1μl, recovered PCR product 4μl, T4DNA liagase 1μl, connect at room temperature for 1h, transform Escherichia coli HD5α, and coat with Ampicillin LB plate, pick a single colony, expand culture overnight in LB medium, extract plasmid DNA, and carry out PCR and enzyme digestion identification. In order to further confirm the correctness of the sequence, three independent positive clones were selected for each segment to be sequenced. Sequencing was performed on an ABI3730 sequencer using the primer-walking method. The correctly sequenced clones were named pGEM-T-A/HZ2 and pGEM-T-B/HZ2, respectively. Sequencing results showed that the A segment of the HZ2 strain had a total of 3259 bp, and the sequence was as follows:
1 ggatacgatc ggtctgaccc cgggggagtc acccggggac aggtcgccaa ggccttgttc1 ggatacgatc ggtctgaccc cgggggagtc acccggggac aggtcgccaa ggccttgttc
61 caggatggaa ctcctccttc tataacgcta tcattgatgg tcagtagaga tcagacaaac61 caggatggaa ctcctccttc tataacgcta tcattgatgg tcagtagaga tcagacaaac
121 gatcgcagcg atgacaaacc tgcaagatca aacccaacag attgttccgt tcatacggag121 gatcgcagcg atgacaaacc tgcaagatca aacccaacag attgttccgt tcatacggag
181 ccttctgatg ccaacaaccg gaccggcgtc cattccggac gacaccctgg agaagcacac181 ccttctgatg ccaacaaccg gaccggcgtc cattccggac gacaccctgg agaagcacac
241 tctcaggtca gagacctcga cctacaattt gactgtgggg gacacagggt cagggctaat241 tctcaggtca gagacctcga cctacaattt gactgtgggg gacacagggt cagggctaat
301 tgtctttttc cctggattcc ctggctcaat tgtgggtgct cactacacac tgcagagcaa301 tgtctttttc cctggattcc ctggctcaat tgtgggtgct cactacacac tgcagagcaa
361 tgggaactac aagttcgatc agatgctcct gactgcccag aacctaccgg ccagttacaa361 tgggaactac aagttcgatc agatgctcct gactgcccag aacctaccgg ccagttacaa
421 ctactgcagg ctagtgagtc ggagtctcac agtgaggtca agcacacttc ctggtggcgt421 ctactgcagg ctagtgagtc ggagtctcac agtgaggtca agcacacttc ctggtggcgt
481 ttatgcacta aacggcacca taaacgccgt gaccttccaa ggaagcctga gtgaactgac481 ttatgcacta aacggcacca taaacgccgt gaccttccaa ggaagcctga gtgaactgac
541 agatgttagc tacaatgggt tgatgtctgc aacagccaac atcaacgaca aaattgggaa541 agatgttagc tacaatgggt tgatgtctgc aacagccaac atcaacgaca aaattgggaa
601 cgtcctagta ggggaagggg tcaccgtcct cagcttaccc acatcatatg atcttgggta601 cgtcctagta ggggaagggg tcaccgtcct cagcttaccc acatcatatg atcttgggta
661 tgtgaggctt ggtgacccca ttcccgcaat agggcttgac ccaaaaatgg tagccacatg661 tgtgaggctt ggtgacccca ttcccgcaat agggcttgac ccaaaaatgg tagccacatg
721 tgacagcagt aacaggccca gagtctacac cataactgca gccgatgatt accaattctc721 tgacagcagt aacaggccca gagtctacac cataactgca gccgatgatt accaattctc
781 atcacagtac caaccaggtg gggtaacaat cacactgttc tcagccaaca ttgatgccat781 atcacagtac caaccaggtg gggtaacaat cacactgttc tcagccaaca ttgatgccat
841 cacaagcctc agcgttgggg gagagctcgt gtttcaaaca agcgtccatg gccttgtact841 cacaagcctc agcgttgggg gagagctcgt gtttcaaaca agcgtccatg gccttgtact
901 gggcgccacc atctacctca taggcttcga tgggacagcg gtaatcacca gggctgtggc901 gggcgccacc atctacctca taggcttcga tgggacagcg gtaatcacca gggctgtggc
961 cgcaaacaat gggctgacga ccggcaccga caaccttttg ccattcaatc ttgtgattcc961 cgcaaacaat gggctgacga ccggcaccga caaccttttg ccattcaatc ttgtgattcc
1021 aacaaacgag ataacccagc caatcacatc catcaaactg gagatagtga cctccaaaag1021 aacaaacgag ataacccagc caatcacatc catcaaactg gagatagtga cctccaaaag
1081 tggtggtcag gcaggggatc agatgtcatg gtccgcaaga gggagcctag cagtgacgat1081 tggtggtcag gcaggggatc agatgtcatg gtccgcaaga gggagcctag cagtgacgat
1141 ccatggtggc aactatccag gggccctccg tcccgtcacg ctagtggcct acgaaagagt1141 ccatggtggc aactatccag gggccctccg tcccgtcacg ctagtggcct acgaaagagt
1201 ggcaacagga tccgtcgtta cggtcgctgg ggtgagcaac ttcgagctga tcccaaatcc1201 ggcaacagga tccgtcgtta cggtcgctgg ggtgagcaac ttcgagctga tcccaaatcc
1261 tgaactagca aagaacctgg ttacagaata cggccgattt gacccaggag ccatgaacta1261 tgaactagca aagaacctgg ttacagaata cggccgattt gacccaggag ccatgaacta
1321 cacaaaattg atactgagtg agaggggccg tcttggcatc aagaccgtct ggccaacaag1321 cacaaaattg atactgagtg agaggggccg tcttggcatc aagaccgtct ggccaacaag
1381 ggagtacact gactttcgtg aatacttcat ggaggtggcc gacctcaact ctcccctgaa1381 ggagtacact gactttcgtg aatacttcat ggaggtggcc gacctcaact ctcccctgaa
1441 gattgcagga gcattcggct tcaaagacat aatccgggcc ataaggagga tagctgtgcc1441 gattgcagga gcattcggct tcaaagacat aatccgggcc ataaggagga tagctgtgcc
1501 ggtggtctcc acattgttcc cacctgccgc tcccctagcc catgcaattg gggaaggtgt1501 ggtggtctcc acattgttcc cacctgccgc tcccctagcc catgcaattg gggaaggtgt
1561 agactacctg ctgggcgatg aggcacaggc tgcttcagga actgctcgag ccgcgtcagg1561 agactacctg ctgggcgatg aggcacaggc tgcttcagga actgctcgag ccgcgtcagg
1621 aaaagcaaga gctgcctcag gccgcataag gcagctgact ctcgccgccg acaaggggta1621 aaaagcaaga gctgcctcag gccgcataag gcagctgact ctcgccgccg acaaggggta
1681 cgaggtagtc gcgaatctat tccaggtgcc ccagaatccc gtagtcgacg ggattcttgc1681 cgaggtagtc gcgaatctat tccaggtgcc ccagaatccc gtagtcgacg ggattcttgc
1741 ttcacctggg gtactccgcg gtgcacacaa cctcgactgc gtgttaagag agggtgccac1741 ttcacctggg gtactccgcg gtgcacacaa cctcgactgc gtgttaagag agggtgccac
1801 gctattccct gtggttatta cgacagtgga agacgccatg acacccaaag cattgaacag1801 gctattccct gtggttatta cgacagtgga agacgccatg acacccaaag cattgaacag
1861 caaaatgttt gctgtcattg aaggcgtgcg agaagacctc caacctcctt ctcaaagagg1861 caaaatgttt gctgtcattg aaggcgtgcg agaagacctc caacctcctt ctcaaagagg
1921 atccttcata cgaactctct ctggacacag agtctatgga tatgctccag gtggggtact1921 atccttcata cgaactctct ctggacacag agtctatgga tatgctccag gtggggtact
1981 tccactggag actgggagag actacaccgt tgtcccaata gatgatgtct gggacgacag1981 tccactggag actggagag actacaccgt tgtcccaata gatgatgtct gggacgacag
2041 cattatgctg tccaaagatc ccatacctcc tattgtggga aacagtggaa atctagccat2041 cattatgctg tccaaagatc ccatacctcc tattgtggga aacagtggaa atctagccat
2101 agcttacatg gatgtgtttc gacccaaagt cccaatccat gtggctatga cgggagccct2101 agcttacatg gatgtgtttc gacccaaagt cccaatccat gtggctatga cgggagccct
2161 caatgcttgt ggcgagattg agaaagtaag ctttagaagc accaagctcg ccactgcaca2161 caatgcttgt ggcgagattg agaaagtaag ctttagaagc accaagctcg ccactgcaca
2221 ccgacttggc cttaagttgg ctggtcccgg agcattcgat gtaaacaccg ggcccaactg2221 ccgacttggc cttaagttgg ctggtcccgg agcattcgat gtaaacaccg ggcccaactg
2281 ggcaacgttc atcaaacgtt tccctcacaa tccacgcgac tgggacaggc ccccctacct2281 ggcaacgttc atcaaacgtt tccctcacaa tccacgcgac tgggacaggc ccccctacct
2341 caaccaacca taccttccac ccaatgcagg acgccagtac caccttgcca tggctgcatc2341 caaccaacca taccttccac ccaatgcagg acgccagtac caccttgcca tggctgcatc
2401 agagttcaaa gagacccccg aactcgagag tgccgtcaga gcaatggaag cagcagccaa2401 agagttcaaa gagaccccccg aactcgagag tgccgtcaga gcaatggaag cagcagccaa
2461 cgtggaccca ctattccaac ctgcactcag tgtgttcatg tggctggaag agaatgggat2461 cgtggaccca ctattccaac ctgcactcag tgtgttcatg tggctggaag agaatgggat
2521 tgtgactgac atggccaact tcgcactcag cgacccgaac gcccatcggg tgcgaaattt2521 tgtgactgac atggccaact tcgcactcag cgacccgaac gcccatcggg tgcgaaattt
2581 tcttgcaaac gcaccacaag caggcagcaa gtcgcaaagg gccaagtacg ggacagcagg2581 tcttgcaaac gcaccacaag caggcagcaa gtcgcaaagg gccaagtacg ggacagcagg
2641 ctacggagtg gaggctcggg gccccacacc agaggaagca cagagggaaa aagacacacg2641 ctacggagtg gaggctcggg gccccacacc agaggaagca cagagggaaa aagacacacg
2701 gatctcaaag aagatggaga ccatgggcat ctactttgca acaccagaat gggtagcact2701 gatctcaaag aagatggaga ccatgggcat ctactttgca acaccagaat gggtagcact
2761 caatgggcac agagggccaa gccccggcca gctaaagtac tggcagaaca cacgagaaat2761 caatgggcac agagggccaa gccccggcca gctaaagtac tggcagaaca cacgagaaat
2821 accggaccca aacgaggact atctagacta cgtgcatgca gagaagagcc ggttggcatc2821 accggaccca aacgaggact atctagacta cgtgcatgca gagaagagcc ggttggcatc
2881 agaagaacaa atccaaaggg cagctacgtc gatctacggg gctccaggac aggcagagcc2881 agaagaacaa atccaaaggg cagctacgtc gatctacggg gctccaggac aggcagagcc
2941 accccaagct ttcatagacg aagttgccaa agtctatgaa atcaaccatg gacgtggccc2941 accccaagct ttcatagacg aagttgccaa agtctatgaa atcaaccatg gacgtggccc
3001 aaaccaagaa cagatgaaag atctgctctt gactgcgatg gagatgaagc atcgcaatcc3001 aaaccaagaa cagatgaaag atctgctctt gactgcgatg gagatgaagc atcgcaatcc
3061 caggcgggct ctaccaaagc ccaagccaaa acccaatgct ccaacacaga gaccccctgg3061 caggcgggct ctaccaaagc ccaagccaaa acccaatgct ccaacacaga gaccccctgg
3121 tcggctgggc cgctggatca ggaccgtctc tgatgaggac cttgagtgag gctcctggga3121 tcggctgggc cgctggatca ggaccgtctc tgatgaggac cttgagtgag gctcctggga
3181 gtctcccgac accacccgcg caggtgtgga caccaattcg gccttacaac atccaaattg3181 gtctcccgac accacccgcg caggtgtgga caccaattcg gccttacaac atccaaattg
3241 gatccgttcg cgggtcccc3241 gatccgttcg cgggtcccc
B节段共有2827bp,序列如下:The B segment has a total of 2827bp, and the sequence is as follows:
1 ggatacgatg ggtctgaccc tctgggagtc acgaattaac atggctacta ggggcgatgc1 ggatacgatg ggtctgaccc tctgggagtc acgaattaac atggctacta ggggcgatgc
61 ccgccgctaa ttgccatgtt agtggctcct cttcttgatg attctgccac catgagtgac61 ccgccgctaa ttgccatgtt agtggctcct cttcttgatg attctgccac catgagtgac
121 attttcaaca gtccacaggc gcgaagcaag atctcagcag cgttcggcat aaagcctact121 attttcaaca gtccacaggc gcgaagcaag atctcagcag cgttcggcat aaagcctact
181 gctggacaag acgtggaaga actcttgatc cctaaagtct gggtgccacc tgaggatccg181 gctggacaag acgtggaaga actcttgatc cctaaagtct gggtgccacc tgaggatccg
241 cttgccagcc ctagtcgact ggcaaagttc ctcagagaga acggctacaa agttttgcag241 cttgccagcc ctagtcgact ggcaaagttc ctcagagaga acggctacaa agttttgcag
301 ccacggtctc tgcccgagaa tgaggagtat gagaccgacc aaatactccc agacttagca301 ccacggtctc tgcccgagaa tgaggagtat gagaccgacc aaatactccc agacttagca
361 tggatgcgac agatagaagg ggctgtttta aaacctactc tatctctccc cattggaggc361 tggatgcgac agatagaagg ggctgtttta aaacctactc tatctctccc cattggaggc
421 caggagtact tcccaaagta ctacccaaca catcgcccta gcaaggagaa gaccaatgcg421 caggagtact tcccaaagta ctacccaaca catcgcccta gcaaggagaa gaccaatgcg
481 tacccgccag acatcgcact actcaagcag atgatttacc tgtttctcca ggttccagag481 tacccgccag acatcgcact actcaagcag atgattacc tgtttctcca ggttccagag
541 gccaacgagg gcctaaagga tgaagtaacc ctcctgaccc aaaatataag ggataaggcc541 gccaacgagg gcctaaagga tgaagtaacc ctcctgaccc aaaatataag ggataaggcc
601 tatggaagtg ggacctacat ggggcaagca actcgacttg tagccatgaa ggaggttgcc601 tatggaagtg ggacctacat ggggcaagca actcgacttg tagccatgaa ggaggttgcc
661 actgggagaa acccgaacaa ggatcctcta aaacttgggt acacttttga gagcatcgcg661 actgggagaa acccgaacaa ggatcctcta aaacttgggt acacttttga gagcatcgcg
721 cagctgcttg acatcacact accggtaggc ccacccggtg aggatgacaa gccctgggtg721 cagctgcttg acatcacact accggtaggc ccaccccggtg aggatgacaa gccctgggtg
781 ccactcacaa gagtgccgtc gcggatgttg gtgctgacgg gagacgtaga tggcgacttt781 ccactcacaa gagtgccgtc gcggatgttg gtgctgacgg gagacgtaga tggcgacttt
841 gaggttgaag attaccttcc caaaatcaac ctcaagtcat caagtggact accatatgta841 gaggttgaag attaccttcc caaaatcaac ctcaagtcat caagtggact accatatgta
901 ggtcgcacca aaggagagac aattggcgag atgatagcta tctcaaacca gtttctcaga901 ggtcgcacca aaggagagac aattggcgag atgatagcta tctcaaacca gtttctcaga
961 gagctatcaa cactgttgaa gcaaggtgca gggacaaagg ggtcaaacaa gaagaagcta961 gagctatcaa cactgttgaa gcaaggtgca gggacaaagg ggtcaaacaa gaagaagcta
1021 ctcagcatgt taagtgacta ttggtactta tcatgcgggc ttttgtttcc aaaggctgaa1021 ctcagcatgt taagtgacta ttggtactta tcatgcgggc ttttgtttcc aaaggctgaa
1081 aggtacgaca aaagcacatg gctcaccaag acccggaaca tatggtcagc tccatcccca1081 aggtacgaca aaagcacatg gctcaccaag acccggaaca tatggtcagc tccatcccca
1141 acacacctca tgatctccat gatcacctgg cccgtgatgt ccaacagccc aaacaacgtg1141 acaacacctca tgatctccat gatcacctgg cccgtgatgt ccaacagccc aaacaacgtg
1201 ttgaacattg aagggtgtcc atcactctac aaattcaacc cgttcagagg agggttgaac1201 ttgaacattg aagggtgtcc atcactctac aaattcaacc cgttcagagg agggttgaac
1261 aggatcgtcg agtggatatt ggctccggaa gaacccaagg ctcttgtata tgcggacaac1261 aggatcgtcg agtggatatt ggctccggaa gaacccaagg ctcttgtata tgcggacaac
1321 atatacattg tccactcaaa cacgtggtac tcaattgacc tagagaaggg cgaggcaaac1321 atatacattg tccactcaaa cacgtggtac tcaattgacc tagagaaggg cgaggcaaac
1381 tgcacacgcc aacacatgca agccgcaatg tactacatcc tcaccagagg gtggtcagac1381 tgcacacgcc aacacatgca agccgcaatg tactacatcc tcaccagagg gtggtcagac
1441 aacggcgacc caatgttcaa tcaaacatgg gccacctttg caatgaacat tgcccctgct1441 aacggcgacc caatgttcaa tcaaacatgg gccacctttg caatgaacat tgcccctgct
1501 ctagtggtag actcatcgtg tctgataatg aacctgcaaa ttaagaccta tggtcaaggc1501 ctagtggtag actcatcgtg tctgataatg aacctgcaaa ttaagaccta tggtcaaggc
1561 agcgggaatg cagccacgtt catcaataac cacctcttga gcacgctagt gcttgaccag1561 agcgggaatg cagccacgtt catcaataac cacctcttga gcacgctagt gcttgaccag
1621 tggaacctga tgagacagcc cagaccagac agcgaggagt tcaaatcaat tgaggacaag1621 tggaacctga tgagacagcc cagaccagac agcgaggagt tcaaatcaat tgaggacaag
1681 ctaggcatca acttcaagat tgagaggtcc attgatgaca tcaggggcaa gctgagacag1681 ctaggcatca acttcaagat tgagaggtcc attgatgaca tcaggggcaa gctgagacag
1741 cttgtccccc ttgcacaacc agggtacctg agtggggggg ttgaaccaga acaatccagc1741 cttgtccccc ttgcacaacc agggtacctg agtggggggg ttgaaccaga acaatccagc
1801 ccaactgttg agcttgacct actagggtgg tcagctacat acagcaaaga tctcgggatc1801 ccaactgttg agcttgacct actagggtgg tcagctacat acagcaaaga tctcgggatc
1861 tatgtgccgg tgcttgacaa ggaacgccta ttttgttctg cggcgtatcc caagggagta1861 tatgtgccgg tgcttgacaa ggaacgccta ttttgttctg cggcgtatcc caagggagta
1921 gagaacaaga gtctcaagtc taaagtcggg atcgagcagg catacaaggt agtcaggtat1921 gagaacaaga gtctcaagtc taaagtcggg atcgagcagg catacaaggt agtcaggtat
1981 gaggcgttga ggttggtagg tggttggaac tacccactcc tgaacaaagc ctgcaagaat1981 gaggcgttga ggttggtagg tggttggaac taccactcc tgaacaaagc ctgcaagaat
2041 aacgcaggcg ctgctcggcg gcatctggag gccaaggggt tcccgctcga cgagttccta2041 aacgcaggcg ctgctcggcg gcatctggag gccaaggggt tcccgctcga cgagttccta
2101 gccgagtggt ccgggctgtc agagttcggt gaggccttcg aaggcttcaa tatcaagctg2101 gccgagtggt ccgggctgtc agagttcggt gaggccttcg aaggcttcaa tatcaagctg
2161 accgtaacat ctgagagcct agccgaactg aacaagccag taccccccaa gcccccaaat2161 accgtaacat ctgagagcct agccgaactg aacaagccag taccccccaa gcccccaaat
2221 gtcaacagac cagtcaacac tgggggtctc aaggcagtca gcaacgccct taagaccggt2221 gtcaacagac cagtcaacac tgggggtctc aaggcagtca gcaacgccct taagaccggt
2281 cggtacagga acgaagccgg actgagtggt ctcgtccttc tagccacagc aaggagccgt2281 cggtacagga acgaagccgg actgagtggt ctcgtccttc tagccacagc aaggagccgt
2341 ctgcaagacg cagttaaggc caaggcagaa gccgagaaac tccacaagtc caagccagac2341 ctgcaagacg cagttaaggc caaggcagaa gccgagaaac tccacaagtc caagccagac
2401 gaccccgatg cagactggtt tgaaagatca gaaactctgt cagaccttct ggagaaagcc2401 gaccccgatg cagactggtt tgaaagatca gaaactctgt cagaccttct ggagaaagcc
2461 gacatcgcca gtaaggtcgc ccactcagca ctcgtggaaa caagcgacgc tcttgaagca2461 gacatcgcca gtaaggtcgc ccactcagca ctcgtggaaa caagcgacgc tcttgaagca
2521 gttcggtcga cttccgtgta cacccccaag tacccagaag tcaagaaccc acagaccgcc2521 gttcggtcga cttccgtgta cacccccaag tacccagaag tcaagaaccc acagaccgcc
2581 tccaaccccg ttgttgggct ccacctgccc gccaagagag ccaccggtgt ccaggccgct2581 tccaaccccg ttgttgggct ccacctgccc gccaagagag ccaccggtgt ccaggccgct
2641 cttctcggag caggaacgag ccgaccaatg gggatggagg ccccaacacg gtccaagaac2641 cttctcggag caggaacgag ccgaccaatg gggatggagg ccccaacacg gtccaagaac
2701 gccgtgaaaa tggccaaacg gcggcaacgc caaaaagaga gccgccaata gccatgatgg2701 gccgtgaaaa tggccaaacg gcggcaacgc caaaaagaga gccgccaata gccatgatgg
2761 gaaccactca agaagaggac actaatccca gaccccgtat ccccggcctt cgcctgcggg2761 gaaccactca agaagaggac actaatccca gaccccgtat ccccggcctt cgcctgcggg
2821 ggccccc2821 ggccccc
实施例2:Example 2:
本实施例描述了本发明提供的传染性法氏囊病病毒(IBDV)VP5基因缺失的基因组A节段全长序列的获得方法及A、B节段感染性克隆的构建。This example describes the method for obtaining the full-length sequence of segment A of the genome of infectious bursal disease virus (IBDV) VP5 gene deletion provided by the present invention and the construction of infectious clones of segments A and B.
(一)含有VP5基因缺失的A节段的真核表达质粒的构建,整个构建过程如图4所示。(1) Construction of eukaryotic expression plasmid containing segment A of VP5 gene deletion, the whole construction process is shown in FIG. 4 .
以NdeI酶切pGEM-T-A/HZ2,回收长片段(2645bp),并重新自连,获得含有IBDV A节段5’端647bp的重组T载体pGEM-T-AN。以上下游突变引物(The2S:AGATCAGACAAACGATCGCAG,129-149nt;TheA:GcTaGcAATGATAGCGTTATAGAAG,77-101nt,NheI)、TaKaRa MutanBEST Kit进行PCR介导的定点突变,获得3603bp的线性化载体并直接自身连接,获得含有点突变和片段删除的突变体pGEM-T-The2,并测序证实(见图5,方框内为突变后的序列GCTAGC,为NheI酶切位点;箭头所指中括号内为野生病毒基因序列GATGGTCAGTAG。)。将pGEM-T-The2的EcoRI/NdeI酶切片段(623bp)与来自于pGEM-T-A/HZ2的NdeI/KpnI片段(2615bp)线性连接后,直接插入经EcoRI/KpnI酶切的pCI载体,获得最终用于转染的真核表达质粒pCI-ANhe2,并酶切鉴定(图6。泳道M、DNA maker,1、XhoI酶切,2、NdeI酶切;结果与预期的完全一致。)。Digest pGEM-T-A/HZ2 with NdeI, recover the long fragment (2645bp), and re-self-ligate to obtain the recombinant T vector pGEM-T-AN containing 647bp of the 5' end of the IBDV A segment. The above downstream mutation primers (The2S: AGATCAGACAAACGATCGCAG, 129-149nt; TheA: GcTaGcAATGATAGCGTTATAGAAG, 77-101nt, NheI) and TaKaRa MutanBEST Kit were used for PCR-mediated site-directed mutagenesis to obtain a 3603bp linearized vector and directly self-ligated to obtain a vector containing a point mutation and the mutant pGEM-T-The2 with fragment deletion, and confirmed by sequencing (see Figure 5, the mutated sequence GCTAGC in the box, which is the NheI restriction site; the wild virus gene sequence GATGGTCAGTAG in the square brackets indicated by the arrow. ). The EcoRI/NdeI fragment (623bp) of pGEM-T-The2 was linearly ligated with the NdeI/KpnI fragment (2615bp) from pGEM-T-A/HZ2, and then directly inserted into the pCI vector digested with EcoRI/KpnI to obtain the final The eukaryotic expression plasmid pCI-ANhe2 used for transfection was digested and identified (Figure 6. Lane M, DNA maker, 1, XhoI digestion, 2, NdeI digestion; the results were exactly as expected.).
(二)含有B节段真核表达质粒的构建,整个构建过程如图7所示。(2) Construction of a eukaryotic expression plasmid containing segment B, the entire construction process is shown in FIG. 7 .
以重组质粒pGEM-T-B/HZ2为骨架,通过PCR介导的定点突变在B节段cDNA上引入新的酶切位点EcoRV(GATATC)作为分子标记。突变引物EV5:CGCCCTTAAGACCGGTCGGAACGAAG(2265~2296nt),其中:“CTTAAG”为B节段上唯一的Afl II位点;小写黑体标记的序列(a、t、c)为置换的点突变核苷酸。这些突变没有改变B节段上VP1基因的氨基酸编码。以重组质粒pGEM-T-B/HZ2为模板,EV5与B3为引物,使用Pfu聚合酶扩增出573bp的片段。同时对573bp片段和pGEM-T-B/HZ2进行Afl II/Xba I双酶切,用573bp片段替换pGEM-T-B/HZ2的对应部分,得到含有EcoRV标记的B节段重组子pGEM-T-mB/HZ2,并测序证实(图8,pGEM-T-B/HZ2所示为野生病毒B节段相应位置的基因序列;pT-mB所示为突变后B节段相应的基因序列,插入EcoRV酶切位点)。以EcoRI/XbaI/Pvu I酶切pGEM-T-mB/HZ2,回收长片段(2833bp),与经过EcoRI/XbaI酶切的pCI载体连接,获得pCI-mB/HZ2,并酶切鉴定(图9。M、DNA maker,1&2、EcoRV/XhoI酶切;结果与预期的完全一致。)。Using the recombinant plasmid pGEM-TB/HZ2 as the backbone, a new restriction site EcoRV (GATATC) was introduced into the B segment cDNA by PCR-mediated site-directed mutagenesis as a molecular marker. Mutation Primer EV5: CGCC CTTAAG ACCGGTC GGAACGAAG (2265-2296nt), wherein: " CTTAAG " is the only Afl II site on the B segment; the sequence marked in lowercase boldface (a, t, c) is the substituted point mutation nucleotide. These mutations did not alter the amino acid code of the VP1 gene on the B segment. Using the recombinant plasmid pGEM-TB/HZ2 as a template and EV5 and B3 as primers, a 573bp fragment was amplified using Pfu polymerase. Simultaneously perform Afl II/Xba I double enzyme digestion on the 573bp fragment and pGEM-TB/HZ2, replace the corresponding part of pGEM-TB/HZ2 with the 573bp fragment, and obtain the B segment recombinant pGEM-T-mB/HZ2 containing the EcoRV marker , and confirmed by sequencing (Figure 8, pGEM-TB/HZ2 shows the gene sequence of the corresponding position of the wild virus B segment; pT-mB shows the gene sequence corresponding to the B segment after the mutation, inserted into the EcoRV restriction site) . pGEM-T-mB/HZ2 was digested with EcoRI/XbaI/Pvu I, and the long fragment (2833bp) was recovered, ligated with the pCI vector digested with EcoRI/XbaI to obtain pCI-mB/HZ2, and identified by enzyme digestion (Figure 9 .M, DNA maker, 1&2, EcoRV/XhoI digestion; the results are exactly as expected.).
实施例3:Example 3:
本实施例描述了本发明提供的传染性法氏囊病病毒(IBDV)VP5基因缺失毒株ANhe2株的获得方法。This example describes the method for obtaining the infectious bursal disease virus (IBDV) VP5 gene-deleted strain ANhe2 provided by the present invention.
按试剂盒说明书,以ConcertTM high purity plasmid purification system kit抽提pCI-ANhe2和pCI-mB两种转染级超纯质粒。在脂质体Lipofectamine 2000介导下,以pCI-ANhe2/pCI-mB共转染80%融合度的鸡胚成纤维细胞,同时设仅转染脂质体的对照组。用于转染及相关试验的鸡胚成纤维细胞在6孔板上培养。转染72h后,将各组细胞上清分别模拟病毒感染新鲜细胞,依次“传代”5次。According to the kit instructions, two transfection-grade ultrapure plasmids, pCI-ANhe2 and pCI-mB, were extracted with Concert TM high purity plasmid purification system kit. Under the mediation of
鸡胚成纤维细胞在转染后24h开始出现病变,并逐渐加剧。继续培养至转染后72h,收获细胞培养物上清液直接感染新鲜细胞,以后以这种方式类似地不断进行细胞培养上清液的“传代”。两个质粒组合在每次“传代”时都出现了细胞病变(CPE,图10A),这种CPE与正常的IBDV感染培养细胞所产生的CPE极为相似,主要的表现为细胞圆缩,团聚、破裂,折光性增强,颗粒状物质增多;而从第2次传代开始,转染脂质体对照组没有出现类似的CPE(图10B)。以上提示已经拯救出IBDV,并且被拯救的IBDV在鸡胚成纤维细胞上不断复制和传代。Chicken embryo fibroblasts began to appear lesions 24 hours after transfection, and gradually intensified. The culture was continued until 72 hours after transfection, and the cell culture supernatant was harvested to directly infect fresh cells. In this way, the cell culture supernatant was continuously "passaged" in a similar manner. Cytopathic changes (CPE, Figure 10A) appeared in each "passage" of the two plasmid combinations. This CPE is very similar to the CPE produced by normal IBDV-infected cultured cells. The main manifestations are cell shrinkage, agglomeration, rupture, increased refraction, and increased granular matter; and from the second passage, similar CPE did not appear in the transfected liposome control group (Fig. 10B). The above tips have rescued IBDV, and the rescued IBDV has been continuously replicated and passaged on chicken embryo fibroblasts.
采用间接免疫荧光法检测病毒蛋白表达情况,每个试验组分别以兔抗IBDV血清和兔抗IBDV VP5血清为一抗,FITC标记的羊抗鸡IgG为二抗,检测病毒结构蛋白和非结构蛋白的表达。模拟感染36h后的鸡胚成纤维细胞,以兔抗IBDV抗血清为一抗检测时,可的“传代”细胞中观察到特异性的黄绿色荧光(图11B);而以兔抗IBDV VP5抗血清检测时,则不能观察到特异性荧光(图11D)。无论是兔抗IBDV血清还是兔抗IBDV VP5血清均能从母本病毒HZ2株感染细胞中检测到特异性的黄绿色荧光(图11A、C)。以任何一种血清为一抗均不能从对照组中观察到特异性荧光(图11E、F)。上述结果提示,VP5蛋白在新构建的转染组合pCI-ANhe2/pCI-mB转染后不被表达。收集细胞培养液超速离心后,弃上清液用TEN溶液重悬浮,磷钨酸负染,在电镜下可以观察到培养物上清液中有直径为55~60nm、无囊膜的病毒粒子存在,这与双RNA病毒科病毒特有的形态特征一致。The expression of viral proteins was detected by indirect immunofluorescence method. In each test group, rabbit anti-IBDV serum and rabbit anti-IBDV VP5 serum were used as primary antibodies, and FITC-labeled goat anti-chicken IgG was used as secondary antibody to detect viral structural and non-structural proteins. expression. Chicken embryo fibroblasts after 36 hours of simulated infection were tested with rabbit anti-IBDV antiserum as the primary antibody, and specific yellow-green fluorescence was observed in the "passage" cells (Fig. 11B); while rabbit anti-IBDV VP5 antibody When serum was detected, specific fluorescence could not be observed (Fig. 11D). Both the rabbit anti-IBDV serum and the rabbit anti-IBDV VP5 serum could detect specific yellow-green fluorescence from cells infected with the parental virus HZ2 strain (Fig. 11A, C). No specific fluorescence could be observed from the control group using any serum as the primary antibody (Fig. 11E, F). The above results suggested that VP5 protein was not expressed after transfection with the newly constructed transfection combination pCI-ANhe2/pCI-mB. Collect the cell culture medium after ultracentrifugation, discard the supernatant and resuspend it with TEN solution, and negatively stain with phosphotungstic acid. Under the electron microscope, it can be observed that there are virus particles with a diameter of 55-60nm and no envelope in the culture supernatant. , which is consistent with the unique morphological characteristics of the Binnaviridae virus.
尽管在共转染和多次细胞传代过程中没有接触其他IBDV,但为确定这种rIBDV的基因组确实来自pCI-ANhe2和pCI-mB,为此以A5/A3引物对重新扩增出rIBDV的A节段cDNA,以NheI酶切PCR产物验证定点突变引入的分子标记,可检测到预期分子量的条带存在,并测序证实。Although there was no contact with other IBDV during co-transfection and multiple cell passages, in order to confirm that the genome of this rIBDV was indeed derived from pCI-ANhe2 and pCI-mB, the A5/A3 primer pair was used to re-amplify the A of rIBDV. Segmental cDNA was digested with NheI to verify the molecular markers introduced by site-directed mutagenesis. Bands with expected molecular weights could be detected and confirmed by sequencing.
把源自pCI-ANhe2/pCI-mB,并在鸡胚成纤维细胞中获救的rIBDV命名为ANhe2株。The rIBDV derived from pCI-ANhe2/pCI-mB and rescued in chicken embryo fibroblasts was named ANhe2 strain.
实施例4:Example 4:
本实施例描述了本发明提供的传染性法氏囊病病毒(IBDV)VP5基因缺失毒株ANhe2株的生产方法。This example describes the production method of the infectious bursal disease virus (IBDV) VP5 gene deletion strain ANhe2 provided by the present invention.
IBDV ANhe2株细胞毒以100μl/胚的量接种11胚龄SPF鸡胚,4天后收集尿囊液,8000rpm离心10min,收集上清。上清以10倍梯度稀释接种长成单层的鸡胚成纤维细胞,从接种后24h开始观察细胞病变情况,直到120h;按Reed-Muench方法计算细胞培养组织半数感染量(TCID50)。结果表明ANhe2株通过SPF鸡胚增殖后,病毒滴度可达105.5TCID50。IBDV ANhe2 strain cytotoxicity was used to inoculate 11-embryo-age SPF chicken embryos at an amount of 100 μl/embryo. After 4 days, the allantoic fluid was collected, centrifuged at 8000 rpm for 10 min, and the supernatant was collected. The supernatant was inoculated into a monolayer of chicken embryo fibroblasts by 10-fold serial dilution, and the cytopathic condition was observed from 24h after inoculation until 120h; the half-infection dose (TCID 50 ) of the cell culture tissue was calculated according to the Reed-Muench method. The results showed that the virus titer of ANhe2 strain could reach 10 5.5 TCID 50 after being propagated through SPF chicken embryos.
所有尿囊液上清通过0.22μm孔径的细菌滤器过滤除菌后,若直接用于接种,则以无菌生理盐水稀释至5×104TCID50/ml浓度。每羽鸡的免疫剂量按5×103TCID50的病毒量计算。最后的接种剂量为100μl/羽。All allantoic fluid supernatants were sterilized by filtration through a bacterial filter with a pore size of 0.22 μm, and if used directly for inoculation, they were diluted with sterile normal saline to a concentration of 5×10 4 TCID 50 /ml. The immunization dose of each chicken is calculated according to the virus load of 5×10 3 TCID 50 . The final inoculation dose was 100 μl/feather.
若除菌后的病毒病毒(尿囊液上清)用于保存,可以直接将尿囊液密封于疫苗瓶中-20℃冷冻保存;如需长期保存,可以对尿囊液进行冷冻干燥后,密封于疫苗瓶中-20℃或-70℃冷冻保存。If the sterilized virus (supernatant of allantoic fluid) is used for preservation, the allantoic fluid can be directly sealed in a vaccine bottle and stored at -20°C; if long-term storage is required, the allantoic fluid can be freeze-dried, Store in a sealed vaccine bottle at -20°C or -70°C.
实施例5:Example 5:
本实施例描述了本发明提供的传染性法氏囊病病毒(IBDV)VP5基因缺失毒株ANhe2株对雏鸡的安全性和致病性。This example describes the safety and pathogenicity of the infectious bursal disease virus (IBDV) VP5 gene deletion strain ANhe2 strain on chicks provided by the present invention.
(一)基因缺失病毒的安全性和致病性(1) Safety and pathogenicity of gene deletion virus
试验共分6组,即ANhe2株病毒四个剂量组(5×102、5×103、5×104和105TCID50/羽)、HZ2株病毒一个剂量组(5×103TCID50/羽)、正常对照组,每组15只鸡,各试验组隔离饲养,专人管理。两种病毒均通过饮水途径接种,10日龄首免,28日龄加强免疫。接种前应停水2小时,以使鸡群产生渴感;接种前72小时和接种后24小时内,在饮用水中不得加入任何药物和消毒剂。免疫后每天观察鸡只的临床反应,并于首免后3天、加强免疫后3天、加强免疫后10天分别扑杀5只,全身、内脏器官检查后,剖取法氏囊,用10%甲醛固定,进行组织病理学检查。The test was divided into 6 groups, four dose groups of ANhe2 strain virus (5×10 2 , 5×10 3 , 5×10 4 and 10 5 TCID 50 /feather), one dose group of HZ2 strain virus (5×10 3 TCID 50 /feather), normal control group, every group of 15 chickens, each test group is kept in isolation and managed by special personnel. The two viruses were inoculated through drinking water, the first immunization at the age of 10 days, and the booster immunization at the age of 28 days. Water should be stopped for 2 hours before inoculation to make the chickens feel thirsty; within 72 hours before inoculation and within 24 hours after inoculation, no drugs and disinfectants should be added to drinking water. Observe the clinical response of the chickens every day after immunization, and kill 5 chickens respectively 3 days after the first immunization, 3 days after the booster immunization, and 10 days after the booster immunization. Formaldehyde fixed, for histopathological examination.
结果见表2(*表示有法氏囊损伤的鸡数量):ANhe2株病毒四个剂量组和母本病毒HZ2株病毒免疫后,连续观察3周,雏鸡临床上均未出现任何不良反应。首次免疫后3天扑杀,经检查,法氏囊、脾脏等均无眼观变化,病理组织学观察表明:ANhe2株病毒四个剂量免疫组的所有法氏囊均正常,HZ2免疫组有3只鸡的法氏囊(3/5)出现轻微的损伤。加强免疫后3天扑杀,结果表明所有免疫组的法氏囊均无眼观变化,病理组织学观察表明:ANhe2株病毒四个剂量免疫组均正常,而HZ2免疫组有3只鸡(3/5)出现轻微的损伤。加强免疫后10天扑杀,所有试验组鸡法氏囊无病理变化。上述结果说明,ANhe2株病毒对雏鸡尚失了致病性,对雏鸡是安全的,而HZ2弱毒苗对雏鸡还具有一定的毒力。The results are shown in Table 2 ( * indicates the number of chickens with bursal damage): after immunization of four dose groups of ANhe2 strain virus and HZ2 strain virus of the mother virus, the chicks were observed continuously for 3 weeks, and no adverse reactions occurred in the chicks clinically. Three days after the first immunization, the bursa and spleen had no visual changes. Histopathological observations showed that all bursa of the ANhe2 virus strain immunized with four doses were normal, and the HZ2 immunized group had 3 The bursa of Fabricius (3/5) of all birds showed slight damage. 3 days after the booster immunization, the results showed that the bursa of Fabricius in all immunized groups had no visual changes, and histopathological observation showed that: the four doses of ANhe2 strain virus immunized groups were all normal, while the HZ2 immunized group had 3 chickens (3 /5) Slight damage occurs. After culling 10 days after the booster immunization, there was no pathological change in the bursa of Fabricius in all test groups. The above results show that the ANhe2 strain virus has lost its pathogenicity to chickens and is safe to chickens, while the attenuated HZ2 vaccine has certain toxicity to chickens.
表2传染性法氏囊病病毒ANhe2株对雏鸡的致病性与安全性试验结果Table 2 Pathogenicity and safety test results of infectious bursal disease virus ANhe2 strain to chicks
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EP0887412A1 (en) * | 1997-05-26 | 1998-12-30 | Akzo Nobel N.V. | Recombinant birnavirus vaccine |
CN1366041A (en) * | 2000-07-07 | 2002-08-28 | 阿克佐诺贝尔公司 | Broad spectrum infectious chicken blader disease virus vaccine |
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WO2004085634A2 (en) * | 2003-03-24 | 2004-10-07 | Akzo Nobel N.V. | Infectious bursal disease virus mutants and vaccines |
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EP0887412A1 (en) * | 1997-05-26 | 1998-12-30 | Akzo Nobel N.V. | Recombinant birnavirus vaccine |
CN1373807A (en) * | 1999-07-14 | 2002-10-09 | Id-莱利斯塔德动物育种及动物保健研究所公司 | Mosaic infections bursal disease virus vaccines |
CN1366041A (en) * | 2000-07-07 | 2002-08-28 | 阿克佐诺贝尔公司 | Broad spectrum infectious chicken blader disease virus vaccine |
WO2004085634A2 (en) * | 2003-03-24 | 2004-10-07 | Akzo Nobel N.V. | Infectious bursal disease virus mutants and vaccines |
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