CA2389953A1 - New functionalized polymeric reagents - Google Patents
New functionalized polymeric reagents Download PDFInfo
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- CA2389953A1 CA2389953A1 CA002389953A CA2389953A CA2389953A1 CA 2389953 A1 CA2389953 A1 CA 2389953A1 CA 002389953 A CA002389953 A CA 002389953A CA 2389953 A CA2389953 A CA 2389953A CA 2389953 A1 CA2389953 A1 CA 2389953A1
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- functionalized polymeric
- reagent
- polymeric reagent
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- 239000003153 chemical reaction reagent Substances 0.000 title claims abstract description 80
- 238000000034 method Methods 0.000 claims abstract description 44
- 238000010532 solid phase synthesis reaction Methods 0.000 claims abstract description 32
- XFXPMWWXUTWYJX-UHFFFAOYSA-N isonitrile group Chemical group N#[C-] XFXPMWWXUTWYJX-UHFFFAOYSA-N 0.000 claims abstract description 23
- 238000006452 multicomponent reaction Methods 0.000 claims abstract description 19
- 239000002253 acid Substances 0.000 claims abstract description 16
- 150000002894 organic compounds Chemical class 0.000 claims abstract description 16
- 150000001875 compounds Chemical class 0.000 claims description 55
- 238000006243 chemical reaction Methods 0.000 claims description 26
- 125000005647 linker group Chemical group 0.000 claims description 24
- 229920000642 polymer Polymers 0.000 claims description 23
- 239000000758 substrate Substances 0.000 claims description 19
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 claims description 18
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 18
- -1 formamido group Chemical group 0.000 claims description 17
- 229910052739 hydrogen Inorganic materials 0.000 claims description 16
- 239000001257 hydrogen Substances 0.000 claims description 16
- 150000002431 hydrogen Chemical group 0.000 claims description 16
- RIOQSEWOXXDEQQ-UHFFFAOYSA-N triphenylphosphine Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 RIOQSEWOXXDEQQ-UHFFFAOYSA-N 0.000 claims description 12
- VZGDMQKNWNREIO-UHFFFAOYSA-N tetrachloromethane Chemical compound ClC(Cl)(Cl)Cl VZGDMQKNWNREIO-UHFFFAOYSA-N 0.000 claims description 10
- 238000003776 cleavage reaction Methods 0.000 claims description 9
- 125000000951 phenoxy group Chemical group [H]C1=C([H])C([H])=C(O*)C([H])=C1[H] 0.000 claims description 9
- 230000007017 scission Effects 0.000 claims description 9
- 125000004191 (C1-C6) alkoxy group Chemical group 0.000 claims description 7
- FONJQLLBGLSRAV-UHFFFAOYSA-N (2,4,5-trichlorophenyl) formate Chemical compound ClC1=CC(Cl)=C(OC=O)C=C1Cl FONJQLLBGLSRAV-UHFFFAOYSA-N 0.000 claims description 5
- 125000004169 (C1-C6) alkyl group Chemical group 0.000 claims description 5
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical group [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims description 4
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical group [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 4
- 229910052799 carbon Inorganic materials 0.000 claims description 4
- 230000003100 immobilizing effect Effects 0.000 claims description 4
- 239000001301 oxygen Chemical group 0.000 claims description 4
- 229910052760 oxygen Inorganic materials 0.000 claims description 4
- 125000006850 spacer group Chemical group 0.000 claims description 3
- 238000010306 acid treatment Methods 0.000 claims description 2
- 239000000543 intermediate Substances 0.000 abstract description 10
- 238000002360 preparation method Methods 0.000 abstract description 8
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 114
- 229920005989 resin Polymers 0.000 description 43
- 239000011347 resin Substances 0.000 description 43
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 24
- 238000003786 synthesis reaction Methods 0.000 description 22
- 230000015572 biosynthetic process Effects 0.000 description 19
- 239000000047 product Substances 0.000 description 13
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 10
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 10
- 150000002527 isonitriles Chemical class 0.000 description 10
- MXZANEWAFZMPKW-UHFFFAOYSA-N imidazol-1-amine Chemical class NN1C=CN=C1 MXZANEWAFZMPKW-UHFFFAOYSA-N 0.000 description 9
- 238000006058 Ugi-reaction Methods 0.000 description 8
- 239000004793 Polystyrene Substances 0.000 description 6
- 230000008901 benefit Effects 0.000 description 6
- 229920001223 polyethylene glycol Polymers 0.000 description 6
- 229920002223 polystyrene Polymers 0.000 description 6
- 239000011541 reaction mixture Substances 0.000 description 6
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 5
- 150000001299 aldehydes Chemical class 0.000 description 5
- 238000000746 purification Methods 0.000 description 5
- DEPDDPLQZYCHOH-UHFFFAOYSA-N 1h-imidazol-2-amine Chemical group NC1=NC=CN1 DEPDDPLQZYCHOH-UHFFFAOYSA-N 0.000 description 4
- 150000001350 alkyl halides Chemical class 0.000 description 4
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 description 4
- 239000012071 phase Substances 0.000 description 4
- 230000008569 process Effects 0.000 description 4
- 239000007790 solid phase Substances 0.000 description 4
- 238000012360 testing method Methods 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 3
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 3
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 3
- 150000001263 acyl chlorides Chemical class 0.000 description 3
- 230000010933 acylation Effects 0.000 description 3
- 238000005917 acylation reaction Methods 0.000 description 3
- 238000005804 alkylation reaction Methods 0.000 description 3
- 150000001408 amides Chemical class 0.000 description 3
- 125000003277 amino group Chemical group 0.000 description 3
- 125000000524 functional group Chemical group 0.000 description 3
- 239000003446 ligand Substances 0.000 description 3
- 229910052757 nitrogen Inorganic materials 0.000 description 3
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 3
- YBBRCQOCSYXUOC-UHFFFAOYSA-N sulfuryl dichloride Chemical class ClS(Cl)(=O)=O YBBRCQOCSYXUOC-UHFFFAOYSA-N 0.000 description 3
- UGNWTBMOAKPKBL-UHFFFAOYSA-N tetrachloro-1,4-benzoquinone Chemical compound ClC1=C(Cl)C(=O)C(Cl)=C(Cl)C1=O UGNWTBMOAKPKBL-UHFFFAOYSA-N 0.000 description 3
- 238000005406 washing Methods 0.000 description 3
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- 238000005033 Fourier transform infrared spectroscopy Methods 0.000 description 2
- 101100030361 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) pph-3 gene Proteins 0.000 description 2
- 125000003545 alkoxy group Chemical group 0.000 description 2
- 230000029936 alkylation Effects 0.000 description 2
- 238000010523 cascade reaction Methods 0.000 description 2
- 239000003054 catalyst Substances 0.000 description 2
- 230000000694 effects Effects 0.000 description 2
- 125000000623 heterocyclic group Chemical group 0.000 description 2
- 238000002955 isolation Methods 0.000 description 2
- 238000004519 manufacturing process Methods 0.000 description 2
- 239000002808 molecular sieve Substances 0.000 description 2
- MYWUZJCMWCOHBA-UHFFFAOYSA-N n-methyl-1-phenylpropan-2-amine Chemical compound CNC(C)CC1=CC=CC=C1 MYWUZJCMWCOHBA-UHFFFAOYSA-N 0.000 description 2
- 125000004433 nitrogen atom Chemical group N* 0.000 description 2
- 239000012038 nucleophile Substances 0.000 description 2
- 238000006053 organic reaction Methods 0.000 description 2
- 229920002401 polyacrylamide Polymers 0.000 description 2
- 230000035484 reaction time Effects 0.000 description 2
- URGAHOPLAPQHLN-UHFFFAOYSA-N sodium aluminosilicate Chemical compound [Na+].[Al+3].[O-][Si]([O-])=O.[O-][Si]([O-])=O URGAHOPLAPQHLN-UHFFFAOYSA-N 0.000 description 2
- 239000007858 starting material Substances 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 230000002194 synthesizing effect Effects 0.000 description 2
- LNJRJRJNQUKOBT-UHFFFAOYSA-N 1-(chloromethyl)-3,5-diisocyanatobenzene Chemical compound ClCC1=CC(N=C=O)=CC(N=C=O)=C1 LNJRJRJNQUKOBT-UHFFFAOYSA-N 0.000 description 1
- ZNJRONVKWRHYBF-UHFFFAOYSA-N 2-[2-[2-(1-azatricyclo[7.3.1.05,13]trideca-5,7,9(13)-trien-7-yl)ethenyl]-6-methylpyran-4-ylidene]propanedinitrile Chemical compound O1C(C)=CC(=C(C#N)C#N)C=C1C=CC1=CC(CCCN2CCC3)=C2C3=C1 ZNJRONVKWRHYBF-UHFFFAOYSA-N 0.000 description 1
- 101000909256 Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) DNA polymerase I Proteins 0.000 description 1
- 108090000790 Enzymes Proteins 0.000 description 1
- 102000004190 Enzymes Human genes 0.000 description 1
- 239000002202 Polyethylene glycol Substances 0.000 description 1
- 229920002873 Polyethylenimine Polymers 0.000 description 1
- 239000004743 Polypropylene Substances 0.000 description 1
- 239000004372 Polyvinyl alcohol Substances 0.000 description 1
- 101000902592 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) DNA polymerase Proteins 0.000 description 1
- 229920002125 Sokalan® Polymers 0.000 description 1
- 150000007513 acids Chemical class 0.000 description 1
- 150000001266 acyl halides Chemical class 0.000 description 1
- 238000001042 affinity chromatography Methods 0.000 description 1
- 125000000217 alkyl group Chemical group 0.000 description 1
- 229920003180 amino resin Polymers 0.000 description 1
- 238000007281 aminoalkylation reaction Methods 0.000 description 1
- 239000006227 byproduct Substances 0.000 description 1
- 229920002678 cellulose Polymers 0.000 description 1
- 239000001913 cellulose Substances 0.000 description 1
- 150000005829 chemical entities Chemical class 0.000 description 1
- 150000001805 chlorine compounds Chemical class 0.000 description 1
- 238000004737 colorimetric analysis Methods 0.000 description 1
- 239000002131 composite material Substances 0.000 description 1
- 238000009833 condensation Methods 0.000 description 1
- 230000005494 condensation Effects 0.000 description 1
- 239000005289 controlled pore glass Substances 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 230000008878 coupling Effects 0.000 description 1
- 238000010168 coupling process Methods 0.000 description 1
- 238000005859 coupling reaction Methods 0.000 description 1
- 238000006352 cycloaddition reaction Methods 0.000 description 1
- 239000012024 dehydrating agents Substances 0.000 description 1
- 239000012039 electrophile Substances 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 239000012467 final product Substances 0.000 description 1
- 238000007667 floating Methods 0.000 description 1
- 239000012634 fragment Substances 0.000 description 1
- 150000004820 halides Chemical class 0.000 description 1
- 229910052736 halogen Inorganic materials 0.000 description 1
- 150000002367 halogens Chemical class 0.000 description 1
- 150000002391 heterocyclic compounds Chemical class 0.000 description 1
- 238000013537 high throughput screening Methods 0.000 description 1
- 230000006872 improvement Effects 0.000 description 1
- 150000002576 ketones Chemical class 0.000 description 1
- 238000004949 mass spectrometry Methods 0.000 description 1
- 239000011159 matrix material Substances 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 238000004452 microanalysis Methods 0.000 description 1
- 238000002156 mixing Methods 0.000 description 1
- 239000000203 mixture Substances 0.000 description 1
- 238000012544 monitoring process Methods 0.000 description 1
- 150000002772 monosaccharides Chemical class 0.000 description 1
- PMZAXZNFRDOMGE-UHFFFAOYSA-N n,n-bis(2-isocyanatoethyl)nitramide Chemical compound O=C=NCCN([N+](=O)[O-])CCN=C=O PMZAXZNFRDOMGE-UHFFFAOYSA-N 0.000 description 1
- 101150111342 nol9 gene Proteins 0.000 description 1
- 239000012454 non-polar solvent Substances 0.000 description 1
- 238000005580 one pot reaction Methods 0.000 description 1
- 238000005457 optimization Methods 0.000 description 1
- 239000002245 particle Substances 0.000 description 1
- 230000037361 pathway Effects 0.000 description 1
- 238000010647 peptide synthesis reaction Methods 0.000 description 1
- 150000003003 phosphines Chemical class 0.000 description 1
- 239000002798 polar solvent Substances 0.000 description 1
- 239000004584 polyacrylic acid Substances 0.000 description 1
- 229920001155 polypropylene Polymers 0.000 description 1
- 229920001451 polypropylene glycol Polymers 0.000 description 1
- 229920002451 polyvinyl alcohol Polymers 0.000 description 1
- 239000002516 radical scavenger Substances 0.000 description 1
- 239000000376 reactant Substances 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 239000000741 silica gel Substances 0.000 description 1
- 229910002027 silica gel Inorganic materials 0.000 description 1
- 239000007787 solid Substances 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 238000004611 spectroscopical analysis Methods 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 229940124530 sulfonamide Drugs 0.000 description 1
- 150000003456 sulfonamides Chemical group 0.000 description 1
- 150000003461 sulfonyl halides Chemical class 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C291/00—Compounds containing carbon and nitrogen and having functional groups not covered by groups C07C201/00 - C07C281/00
- C07C291/10—Isocyanides
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D311/00—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings
- C07D311/02—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings ortho- or peri-condensed with carbocyclic rings or ring systems
- C07D311/78—Ring systems having three or more relevant rings
- C07D311/80—Dibenzopyrans; Hydrogenated dibenzopyrans
- C07D311/82—Xanthenes
- C07D311/84—Xanthenes with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached in position 9
- C07D311/88—Nitrogen atoms
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/30—Introducing nitrogen atoms or nitrogen-containing groups
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B20/00—Methods specially adapted for identifying library members
- C40B20/04—Identifying library members by means of a tag, label, or other readable or detectable entity associated with the library members, e.g. decoding processes
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B30/00—Methods of screening libraries
- C40B30/04—Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B50/00—Methods of creating libraries, e.g. combinatorial synthesis
- C40B50/14—Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07B—GENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
- C07B2200/00—Indexing scheme relating to specific properties of organic compounds
- C07B2200/11—Compounds covalently bound to a solid support
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Medicinal Chemistry (AREA)
- General Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Toxicology (AREA)
- Analytical Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Immunology (AREA)
- Polymers & Plastics (AREA)
- Engineering & Computer Science (AREA)
- Structural Engineering (AREA)
- Addition Polymer Or Copolymer, Post-Treatments, Or Chemical Modifications (AREA)
- Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
Abstract
The present invention relates to functionalized polymeric reagents useful in solution and solid-phase synthesis. It relates more specifically to functionlized polymeric reagent, comprising an acid labile isonitrile moiety.
In further aspects the present invention also relates to use of such functionalized polymeric reagent in solution and solid-phase synthesis, a method for preparing an organic compound by solution and solid-phase synthesis using such functionalized polymeric reagent, a method for preparing such functionalized polymeric reagent and to kits comprising the functionalized polymeric reagent of the invention. The present invention also relates to new intermediates for use in the preparation of the novel functionalized polymeric reagent. In one aspect, the present invention provides a functionalized polymeric reagent for use in solution and solid-phase synthesis, e.g.
multicomponent reactions. The functionalized polymeric reagent comprises a linker, and said linker comprises an acid labile isonitrile moiety. The linker is covalently attached to the polymeric support.
In further aspects the present invention also relates to use of such functionalized polymeric reagent in solution and solid-phase synthesis, a method for preparing an organic compound by solution and solid-phase synthesis using such functionalized polymeric reagent, a method for preparing such functionalized polymeric reagent and to kits comprising the functionalized polymeric reagent of the invention. The present invention also relates to new intermediates for use in the preparation of the novel functionalized polymeric reagent. In one aspect, the present invention provides a functionalized polymeric reagent for use in solution and solid-phase synthesis, e.g.
multicomponent reactions. The functionalized polymeric reagent comprises a linker, and said linker comprises an acid labile isonitrile moiety. The linker is covalently attached to the polymeric support.
Description
NEW FUNCTIONALIZED POLYMERIC REAGENTS
TECHNICAL FIELD
The present invention relates to polymer supports useful in solution and solid-phase synthesis. It relates more specifically to functionalized polymeric reagents, comprising an acid labile isonitrile moiety. In further aspects the present invention also relates to use of such functionalized polymeric reagents in solution and solid-phase synthesis, a method for preparing an organic compound by solution or solid-phase synthesis using such functionalized polymeric reagents, a method for preparing such functionalized polymeric io reagents and to kits comprising the functionalized polymeric reagenta according to the invention. The present invention also relates to new intermediates for use in the preparation of the novel functionalized polymeric reagents.
BACKGROUND ART
is The use of solid-phase synthesis for the synthesis of organic compounds has received a lot of attention lately. The reason for this is that solid-phase synthesis has several advantages compared to traditional solution-phase synthesis. Examples of such advantages include the ease with which products can be separated and purified from excess reagents by a simple washing step and the rapid isolation of product when cleaved and washed from the Zo polymeric support.
The concomittant evolution of combinatorial chemistry and the improvement in automated syntheses has put a bonus on functionalized polymeric reagent. Combinatorial chemistry, combined with High Throughput Screening has revolutionized the speed with which the zs pharmaceutical industry can produce and screen compounds.
A prerequisite for solid-phase synthesis is a functionalized and stable polymeric support.
Many of the commercially available polymeric supports have been developed for solid-phase peptide synthesis and are therefore not inevitably suitable for solid-phase synthesis of compounds with non-peptidic structures.
Although highly successful, solid-phase synthesis exhibits several shortcomings due to the s nature of heterogeneous reaction conditions, of which non-linear kinetic behavior is one.
By replacing insoluble polymers, such as cross-linked polystyrene, with soluble polymers, such as PEG, the familiar reaction conditions of classical organic chemistry is reinstated, and yet product purification is still facilitated through application of macromolecular properties. This methodology in essence avoids the difficulties of solid-phase synthesis ~o while preserving its positive aspects.
A key step in the synthesis of libraries of non-peptidic structures, or other biological active compounds in general, is to find the shortest synthetic pathway in order to speed up the chemistry optimization and production phase. One alternative is to use multicomponent is reactions involving at least 3 reactants, which directly gives the product in a very efficient process. Several multicomponent reactions (MCR) have been described in the literature and one of the most widely utilized is the Ugi MCR. Multicomponent reactions can be performed either in solution or on solid phase. Although the solution phase alternative has proven its efficiency for the synthesis of a large number of biological compound, its major zo drawback is the need of purification steps in order to remove the excess of starting materials. This slows down the overall production process and/or limits its appropriateness for automated or semi-automated synthesis.
One commercially available functionalized polymeric reagent comprising an isonitrile ~s moiety is shown below in Figure 1. The isonitrile moiety can not be cleaved from the polymeric support by acid treatment.
C
III+
N
Poi Figure 1. Commercially available functionali~ed polvmeric reagent containing an isonitrile moiety s This drawback is overcome by the present invention, which thereby introduces a novel use for functionalized polymeric reagents comprisingan isonitrile moiety.
Isonitriles have always been a poor source of diversity in combinatorial chemistry. This is due to the low number of commercially available isonitriles and the cost associated with time-consuming efforts of custom syntheses of a large number of diverse isonitriles. The present invention ~o overcomes these problems by use of a resin capture strategy where the reactive isonitrile moiety is attached to the polymeric support in such a way as to make it cleavable by acid.
The resin capture strategy used has a further advantage in that it gives no by-products that are fragments of the desired final product. Compounds synthesized by this resin capture strategy and released by acid cleavage are pure and do not require any further purification is steps.
SUMMARY OF THE INVENTION
The present invention provides a functionalized polymeric reagent comprising a linker moiety for use in solution and solid-phase synthesis. The linker is compatible with a ~o number of reagents and reaction conditions used in the synthesis of organic compounds.
The funetionalized polymeric reagent is also useful in combinatorial chemistry.
Thus, one aspect of the present invention is a functionalized polymeric reagent for use in solution and solid-phase synthesis. The functionalized polymeric reagent comprises a linker, and said linker comprises an acid labile isonitrile moiety. The linker is covalently attached to the polymeric support.
In another aspect the present invention provides a method for preparing an organic s compound by solution or solid-phase synthesis. The method comprises the step of immobilizing a substrate compound on the polymeric support via said isonitrile moiety.
The thereby attached substrate compound is thereafter taken through at least one further organic reaction step to produce the desired compound, which is thereafter cleaved from the polymeric support and isolated. In a preferred embodiment, said method is performed io with a variegated population of substrates and/or a plurality of organic reactions to provide a library of organic compounds.
In another aspect the present invention provides a method for preparing an organic compound by solution or solid-phase synthesis. The method comprises the step of a multi-is component reaction being performed on the acid labile isonitril moiety of the functionalized polymeric reagent. In a preferred embodiment the multi-component reaction is an Ugi or an Ugi-type reaction.
In another aspect the present invention provides a method for preparing a functionalized ~o polymeric reagent. The method comprises the step of reacting a suitable polymeric support comprising an amino group with a "formylating" reagent. The thereby produced formamido group is thereafter convened to an isonitrile moiety. In a preferred embodiment the amino group is treated with 2,4,5-trichlorophenylformate in DMF and the resulting formamido group is treated with triphenylphosphine / carbon tetrachloride and is triethylamine in dichloromethane.
In another aspect the present invention provides new intermediates for use in the preparation of the novel functionalized polymeric reagents.
Accordingly, it is an object of the present invention to provide a functionalized polymeric reagent for use in solution or solid-phase synthesis.
It is another object of the present invention to provide a method for preparing an organic compound by solution or solid-phase synthesis.
It is another object of the present invention to provide a method for preparing a library of organic compounds.
~o It is another object of the present invention to provide a method for preparing a functionalized polymeric reagent.
It is another object of the present invention to provide a new intermediate for use in the preparation of a functionalized polymeric reagent.
is DETAILED DESCRIPTION OF THE INVENTION
The present invention relates to functionalized polymeric reagents suitable for solution and solid-phase synthesis, to preparation of said functionalized polymeric reagents, and to use ?o of said functionalized polymeric reagents in solution and solid-phase synthesis of organic compounds, including libraries.
In one aspect, the present invention provides a functionalized polymeric reagent for use in solution and solid-phase synthesis. The functionalized polymeric reagent comprises a zs polymeric support and an acid labile isonitrile moiety , wherein said polymeric support comprises a polymer and a linker. The linker is covalently attached to the polymer and the isonitrile moiety is covalently attached to the linker.
Preferred functionalized polymeric reagents of the present invention are those of Formula I
CsN+ R3 R' R R4 ( i (I) X
polymer wherein X is oxygen, a PEG-chain or a -(CH~)n-CONH- group, s R1 is carbon, hydrogen, phenyl, or substituted phenyl group, R' is hydrogen, phenyl, or substituted phenyl group R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C I -C6 alkyl, C ~ -C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
to More preferred functionalized polymeric reagents of the present invention are C~N+
~O ~ \ v _R
C~
~O ~ \ v _O
i R
C~ N+
O
i is R
TECHNICAL FIELD
The present invention relates to polymer supports useful in solution and solid-phase synthesis. It relates more specifically to functionalized polymeric reagents, comprising an acid labile isonitrile moiety. In further aspects the present invention also relates to use of such functionalized polymeric reagents in solution and solid-phase synthesis, a method for preparing an organic compound by solution or solid-phase synthesis using such functionalized polymeric reagents, a method for preparing such functionalized polymeric io reagents and to kits comprising the functionalized polymeric reagenta according to the invention. The present invention also relates to new intermediates for use in the preparation of the novel functionalized polymeric reagents.
BACKGROUND ART
is The use of solid-phase synthesis for the synthesis of organic compounds has received a lot of attention lately. The reason for this is that solid-phase synthesis has several advantages compared to traditional solution-phase synthesis. Examples of such advantages include the ease with which products can be separated and purified from excess reagents by a simple washing step and the rapid isolation of product when cleaved and washed from the Zo polymeric support.
The concomittant evolution of combinatorial chemistry and the improvement in automated syntheses has put a bonus on functionalized polymeric reagent. Combinatorial chemistry, combined with High Throughput Screening has revolutionized the speed with which the zs pharmaceutical industry can produce and screen compounds.
A prerequisite for solid-phase synthesis is a functionalized and stable polymeric support.
Many of the commercially available polymeric supports have been developed for solid-phase peptide synthesis and are therefore not inevitably suitable for solid-phase synthesis of compounds with non-peptidic structures.
Although highly successful, solid-phase synthesis exhibits several shortcomings due to the s nature of heterogeneous reaction conditions, of which non-linear kinetic behavior is one.
By replacing insoluble polymers, such as cross-linked polystyrene, with soluble polymers, such as PEG, the familiar reaction conditions of classical organic chemistry is reinstated, and yet product purification is still facilitated through application of macromolecular properties. This methodology in essence avoids the difficulties of solid-phase synthesis ~o while preserving its positive aspects.
A key step in the synthesis of libraries of non-peptidic structures, or other biological active compounds in general, is to find the shortest synthetic pathway in order to speed up the chemistry optimization and production phase. One alternative is to use multicomponent is reactions involving at least 3 reactants, which directly gives the product in a very efficient process. Several multicomponent reactions (MCR) have been described in the literature and one of the most widely utilized is the Ugi MCR. Multicomponent reactions can be performed either in solution or on solid phase. Although the solution phase alternative has proven its efficiency for the synthesis of a large number of biological compound, its major zo drawback is the need of purification steps in order to remove the excess of starting materials. This slows down the overall production process and/or limits its appropriateness for automated or semi-automated synthesis.
One commercially available functionalized polymeric reagent comprising an isonitrile ~s moiety is shown below in Figure 1. The isonitrile moiety can not be cleaved from the polymeric support by acid treatment.
C
III+
N
Poi Figure 1. Commercially available functionali~ed polvmeric reagent containing an isonitrile moiety s This drawback is overcome by the present invention, which thereby introduces a novel use for functionalized polymeric reagents comprisingan isonitrile moiety.
Isonitriles have always been a poor source of diversity in combinatorial chemistry. This is due to the low number of commercially available isonitriles and the cost associated with time-consuming efforts of custom syntheses of a large number of diverse isonitriles. The present invention ~o overcomes these problems by use of a resin capture strategy where the reactive isonitrile moiety is attached to the polymeric support in such a way as to make it cleavable by acid.
The resin capture strategy used has a further advantage in that it gives no by-products that are fragments of the desired final product. Compounds synthesized by this resin capture strategy and released by acid cleavage are pure and do not require any further purification is steps.
SUMMARY OF THE INVENTION
The present invention provides a functionalized polymeric reagent comprising a linker moiety for use in solution and solid-phase synthesis. The linker is compatible with a ~o number of reagents and reaction conditions used in the synthesis of organic compounds.
The funetionalized polymeric reagent is also useful in combinatorial chemistry.
Thus, one aspect of the present invention is a functionalized polymeric reagent for use in solution and solid-phase synthesis. The functionalized polymeric reagent comprises a linker, and said linker comprises an acid labile isonitrile moiety. The linker is covalently attached to the polymeric support.
In another aspect the present invention provides a method for preparing an organic s compound by solution or solid-phase synthesis. The method comprises the step of immobilizing a substrate compound on the polymeric support via said isonitrile moiety.
The thereby attached substrate compound is thereafter taken through at least one further organic reaction step to produce the desired compound, which is thereafter cleaved from the polymeric support and isolated. In a preferred embodiment, said method is performed io with a variegated population of substrates and/or a plurality of organic reactions to provide a library of organic compounds.
In another aspect the present invention provides a method for preparing an organic compound by solution or solid-phase synthesis. The method comprises the step of a multi-is component reaction being performed on the acid labile isonitril moiety of the functionalized polymeric reagent. In a preferred embodiment the multi-component reaction is an Ugi or an Ugi-type reaction.
In another aspect the present invention provides a method for preparing a functionalized ~o polymeric reagent. The method comprises the step of reacting a suitable polymeric support comprising an amino group with a "formylating" reagent. The thereby produced formamido group is thereafter convened to an isonitrile moiety. In a preferred embodiment the amino group is treated with 2,4,5-trichlorophenylformate in DMF and the resulting formamido group is treated with triphenylphosphine / carbon tetrachloride and is triethylamine in dichloromethane.
In another aspect the present invention provides new intermediates for use in the preparation of the novel functionalized polymeric reagents.
Accordingly, it is an object of the present invention to provide a functionalized polymeric reagent for use in solution or solid-phase synthesis.
It is another object of the present invention to provide a method for preparing an organic compound by solution or solid-phase synthesis.
It is another object of the present invention to provide a method for preparing a library of organic compounds.
~o It is another object of the present invention to provide a method for preparing a functionalized polymeric reagent.
It is another object of the present invention to provide a new intermediate for use in the preparation of a functionalized polymeric reagent.
is DETAILED DESCRIPTION OF THE INVENTION
The present invention relates to functionalized polymeric reagents suitable for solution and solid-phase synthesis, to preparation of said functionalized polymeric reagents, and to use ?o of said functionalized polymeric reagents in solution and solid-phase synthesis of organic compounds, including libraries.
In one aspect, the present invention provides a functionalized polymeric reagent for use in solution and solid-phase synthesis. The functionalized polymeric reagent comprises a zs polymeric support and an acid labile isonitrile moiety , wherein said polymeric support comprises a polymer and a linker. The linker is covalently attached to the polymer and the isonitrile moiety is covalently attached to the linker.
Preferred functionalized polymeric reagents of the present invention are those of Formula I
CsN+ R3 R' R R4 ( i (I) X
polymer wherein X is oxygen, a PEG-chain or a -(CH~)n-CONH- group, s R1 is carbon, hydrogen, phenyl, or substituted phenyl group, R' is hydrogen, phenyl, or substituted phenyl group R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C I -C6 alkyl, C ~ -C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
to More preferred functionalized polymeric reagents of the present invention are C~N+
~O ~ \ v _R
C~
~O ~ \ v _O
i R
C~ N+
O
i is R
C~ N+ O/
O
R
C~ N+
\ \
O
O
i R
//N:
C
R
wherein R is a polymer directly attached to the linker or through a PEG-chain or a -s (CH2)n-CONH- group.
The following definitions shall apply throughout the specification and the appended claims:
~o The term " functionalized polymeric reagent" denotes a reagent that is covalently attached to a linker moiety, and said linker is covalently attached to a polymer.
The term "polymeric support" denotes a polymer covalently attached to a linker moiety, which can optionally further be attached to a substrate compound.
The term "linker" denotes a reactive functional group that can be used to link molecules is onto polymeric supports.
The term "acid labile isonitrile" denotes an isonitrile moiety which is cleaved from the linker when treated with aqueous trifluoroacetic acid (95%) at room temperature with a half time of less than 30 minutes.
The term "substrate compound" denotes a compound to be modified in a subsequent ~o reaction step.
The term "immobilize" denotes the act of linking, e.g. a substrate compound, by means of chemical or biological procedure to a polymeric support.
The term "multicomponent reaction" denotes a one-pot reaction that form products from at least three different starting materials and incorporate substantial portions of these reagents s into the product. This includes reactions involving at lest three different functional groups, some of which may be parts of the same reagent molecule.
The term "variegated population" denotes a population including at least two different chemical entities, e.g., of different chemical structure. For example, a "variegated population" of nucleophiles would comprise at least two different nucleophiles.
io The term "substituted phenyl" denotes a phenyl group substituted with at least one of the following; C,-C6 alkyl, C1-C6 alkoxy, halogen, or phenoxy group.
The term "formylating reagent" denotes a reagent that can convert an amino group into a formamido group.
is Polymeric supports The choice of the soluble or insoluble polymer of the polymeric support is not crucial.
Suitable soluble and insoluble polymers therefore consists of those known to the skilled artisan in the art of solution or solid-phase synthesis. Examples of suitable insoluble ~o polymer include, but is not limited to, inorganic substrates, e.g.
kieselguhr, silica gel and controlled pore glass, and polymeric organic substrates, e.g. polystyrene, polypropylene, polyethylene glycol, , as well as composite inorganic/polymeric substrates such as polyacrylamide supported within a matrix of kieselguhr particles. Preferred insoluble polymers are 1 % DVB polystyrene and polystyrene-PEG.
Examples of suitable soluble polymers include, but is not limited to, polystyrene (not cross-linked, polyvinyl alcohol, polyethylene imine, polyacrylic acid, polymethylene oxide, PEG, polypropylene oxide, cellulose, polyacrylamide, PEG with 3,5-diisocyanatobenzyl chloride. PEG with 3-nitro-3-azapentane 1,5-diisocyanate, polyvinyl alcohol-poly( 1-vinyl-?-pyrrolidinone, polystyrene-polyvinyl-substituted monosaccharides), poly(N-isopropylacrylamide)-poly(acrylic acid derivatives).
By replacing insoluble polymers with soluble polymers the familiar reaction conditions of s classical organic chemistry is reinstated, and yet product purification is still facilitated through application of macromolecular properties. The present invention thereby avoids the difficulties of solid-phase synthesis while preserving its positive aspects.
Linkers to The choice of the linker is not limited to MAMP resin (amino-(4-methoxyphenyl)methyl polystyrene) (A), and therefore also includes, but is not limited to, Rink amide (B), Wang amino (C), Sasrin amino (D), Sieber amide (E) and 2-chlorotrityl linker (F) shown in Figure 2 below.
NHZ O~ NH2 / \~ R ~ / \~~ O
O O i R
A B
NHZ NHZ O/
/ O
R
C D R
/ ( / O
O
i R R
E
Figure 2. Linkers F
In figure 2, R represents the polymeric support either directly attached to the linker or s through a spacer moiety, such as a PEG-chain or a -(CH2)n-CONH- group.
Preparation of Functionali.-ed Polymeric Reagents A simple synthesis of a functionalized polymeric reagent is schematically shown in Figure ~0 3 and described in more detail in Example 1.
O
NH2 ~
HN"H
2,4,5-trichlorophenylformate, DMF \
Pol ~ ~ O
Pol I ~ I ~ O
Revill-Brown linker 1.64 mmol/g (Chloranil test --) (Chloranil test +++) CCI4, PPh3, Et3N, DCM
C~ N+
Pol I ~ I ~ O
Isonitrile stretch, v max = 2138 cm-' Figure 3. Synthesis of a Functionalized Polymeric Reagent In this example, the functionalized resin is prepared by mixing a polymeric support (for example, amino MAMP linker 100-200 mesh or 200-400 mesh, commercially available from Novabiochem) in a polar solvent (e.g., DMF) with a suitable "formylating"
reagent, e.g. 2,4,5-trichlorophenylformate, as shown in figure 3. The reaction can be performed at room temperature or, in certain embodiments, at elevated temperature to ensure completeness of reaction and/or to decrease reaction times. The time required for the ~o reaction can range from about 3 hours to 24 hours or more: an exemplary reaction time is 12 hours at room temperature.
The formed formamido intermediate is thereafter reacted at room temperature with carbon tetrachloride (CC14) / triphenylphosphine (PPh3) in a non-polar solvent, e.g.
is dichloromethane (DCM) for approximately 3 hours in the presence of a base, e.g.
triethylamine (Et3N) to give the corresponding isonitrile.
This procedure has the advantage that is requires only a minimum number of synthetic steps, uses readily available reagents, and provides a functionalized polymeric reagent in good yield with simple purification steps.
Completeness of reaction with the functionalized polymeric reagent or polymeric supportcan be assessed according to standard techniques such as microanalysis, spectroscopic analysis, or by colorimetric tests. For example, the formation of an isonitril moiety can be monitored by Fourier-transform infra-red spectroscopy (FT-IR), e.g., by monitoring the isonitril stretch at 2138 cm 1. Once the reaction has reached a pre-selected ~o endpoint, the resin is preferably purified by washing. To ensure removal of excess reagents, several cycles of washing, preferably with solvents of a variety of polarities, can be carried out.
Once the functionalized polymeric reagent or polymeric support has been prepared and ~s washed it is stable at room temperature for long periods of time. The functionalized polymeric reagent can be stored for extended periods of time without loss of activity.
Cleavage of Compounds from the Polymeric Support Zo It will be appreciated from the foregoing that the present invention provides a functionalized polymeric reagent, comprising an acid labile isonitrile moiety for use in solution and solid-phase synthesis. Compounds can be cleaved from the polymeric support with a variety of acids including, but not limited, to the following; TFA in DCM (20%). 4 M HCl in dioxane, HF, acetic acid in DCM (8090). A person skilled in the art can easily zs optimize the conditions to get the best possible result in the cleavage step. In general, the resin-bound compounds are preswollen in DCM for 10 min, the resin filtered and a solution of DCM:TFA:water (80:18:2) or 4M HC1 in Dioxane was added and the reaction mixture was agitated for 1 hour at room temperature. The solution is filtered and evaporated to give the crude final compound.
Synthesis of Organic Compounds on the Polymeric Support The present invention provides a method for synthesizing organic compounds by solution or solid-phase synthesis. In one embodiment, the method includes the steps of immobilizing a substrate compound on a polymeric support and at a later stage, cleaving the product from the polymeric support with an acid. As described in more detail belo~;~, in certain embodiments, the substrate compound is provided as a variegated population of substrate compounds, such that a library of organic compounds can be prepared.
~o Persons skilled in the art will appreciate that the immobilized substrate compound can be chemically manipulated while attached to the polymeric support. Thus, in certain embodiments, the method for synthesizing organic compounds by solution or solid-phase synthesis can include a plurality of further reaction steps, after the immobilizing step but vs before the cleaving step. Such synthetic manipulations include reactions, which are standard in solution and solid-phase synthesis. The reaction conditions for such manipulations will generally be selected to avoid cleavage of the substrate compound from the support, unless such concomitant cleavage is desired.
zo Combinatorial Chemistry on the Polymeric Support Functionalized polymeric reagents of the present invention are suitable for use in combinatorial chemistry. Accordingly, in another aspect, the invention provides a method for the solution or solid-phase supported chemical synthesis of libraries. In one zs embodiment, the method comprises the step of reacting a substrate compound, which is immobilized on a polymeric support of the invention, with reagent molecules under conditions such that a library of compounds is prepared. In this embodiment, at least one of the substrate compound or the reagent molecule is provided as a variegated population thereof. It will be appreciated that the method can include the step of cleaving the library of compounds from the polymeric support. Such a cleavage step can be concomitant with the reacting step, or, in certain embodiments, can be a separate cleavage step.
Combinatorial libraries can be screened to determine whether any members of the library s have a desired activity, and, if so, to identify the active compounds.
Soluble compound libraries can be screened by affinity chromatography with an appropriate receptor to isolate ligands for the receptor, followed by identification of the isolated ligands by conventional techniques (e.g., mass spectrometry, NMR, and the like). Contacting the compounds with a soluble receptor can screen immobilized compounds; preferably, the soluble receptor is ~o conjugated to a label (e.g., fluorophores, calorimetric enzymes, radioisotopes, luminescent compounds, and the like) that can be detected to indicate ligand binding.
Alternatively, immobilized compounds can be selectively released and allowed to diffuse through a membrane to interact with a receptor.
is Combinatorial libraries of compounds can also be synthesized with "tags" to encode the identity of each member of the library. In general, this method features the use of inert, but readily detectable, tags that are attached to the solid support or to the compounds. When an active compound is detected (e.g., by one of the techniques described above), the identity of the compound is determined by identification of the unique accompanying tag. This ~o tagging method permits the synthesis of large libraries of compounds that can be identified at very low levels.
A variegated population of substrate compounds can provide diversity in a combinatorial synthesis. Several methodologies have been developed to perform combinatorial ~s chemistry. Examples of such methodologies include, but is not limited to, the mix and split technology and IRORI MiniKans.
Multicomponent Reactions on the Polymeric Support IS
The polymeric support of the invention is suitable for use with multicomponent reactions, but not limited to them. Multicomponent reactions have become increasing common and have been extensively reviewed see e.g. Lute Weber, Svnlett 1999, no 3, 366-3?-l: IL'evin Short, Tetrahedron vol.~3, nol9, 663-6679, 199': Sang Kim, Tetrahedron Letters, 39 s (1998) 6993-6996; Blacburn. Tetrahedron Letters (1998) 39, ~-t69-~-t72, Bienayme , Angew. Chem. Int. Ed (1998) 37. no 16; Blackburn 39, (1998) 363-3638 Tetrahedron Letters.
In a multicomponent reaction three or more component molecules can react simultaneously io or close to simultaneously with each other to provide a molecule which has incorporated substantial portions of these reagent molecule without any isolation of intermediates. This includes reactions involving at least three different functional groups, some of which may be parts of the same reagent molecule. In general a multicomponent reaction is sequences of bimolecular reaction steps that proceed according to the zipper principle, i.e. each is reaction step is a prerequisite for the following step. Examples of multicomponent reactions include but are not limited to, a-aminoalkylation (Mannichj, Passeriini, Ugi and Ugi-type. Ugi and Ugi-type reactions are preferred multicomponent reactions to be used with the polymeric supports of the present invention. Ugi and Ugi-type reactions give access to compounds and functionalities of great interest for a medicinal chemist, e.g.
zo heterocyclic compounds.
Accordingly, in another aspect, the invention provides methods for the multicomponent synthesis of organic compounds. In one embodiment, the method comprises the step of reacting the isonitrile moiety with at least two reagent molecules simultaneously under ~s conditions such that a multicomponent reaction is achieved.
A preferred embodiment of the present invention is schematically shown below in Figure 4.
c~
, ~N
\ \
I
I ~ ~
Pol O
H_N R, R~
~O
Heterocyclic Multicomponent Reaction (of Ugi-type) ' H
Sc(OTf)3 DCM:MeOH (3.1) R' R, N~ R, TFA:DCM 2 R'X N
N~~ ~ R NH
TFA:DCM R2~
R2 \ \ H R
NH~
Pol I ~ I ~ O
Figure =1. Heterocyclic ILlulticomponent Reaction The preferred embodiment shown in Figure 4 is advantageous since it allows a multicomponent reaction to be performed directly onto the acid labile isonitrile moiety of the functionalized polymeric reagent.
The example outlined above consists of a multicomponent Ugi-type condensation wherein the isonitrile moiety of the functionalized polymeric reagent is reacted with 2 different io source of diversity. aldehydes and heteroaromatic amidines. This Ugi-type reaction leads efficiently and in a one step process to the fused 3-aminoimidazoles, using the resin capture strategy. The final compounds are of high purity after acid cleavage.
3-aminoimidazoles has been synthesized according to the present invention. A
wide range is of aldehydes and heteroaromatic amidines was utilised to test the functionalized polymeric reagent and showed the efficiency of the resin capture by obtaining a high yield and excellent purity of the final products. Typical procedure for the synthesis of fused 3-aminoimidazoles by Ugi type reaction and resin capture strategy is described in Example 3, below.
The fused 3-aminoimidazoles contains a nitrogen atom, involved in an amine bond with the polymeric support, which can be further reacted with various electrophilic molecules, e.g. acyl halides, alkyl halides, or sulfonyl halides, and thereafter, be cleaved from the s polymeric support. This tandem reaction process (MCR + acylation/alkylation) increases the diversity which can be introduced onto the 3-fused aminoimidazole core.
The thereby introduced additional diversity is a further advantage of the present invention, since the access of these compounds by traditional solution-phase without polymeric support is cumbersome, since the corresponding isonitriles are either not commercially available or ~o time-consuming to synthesize. Due to the low number of commercially available isonitriles able to be utilised in combinatorial chemistry (<20) and the cost and time-consumption of custom syntheses, the isonitriles have always been the poorest source of diversity involves in the Ugi reaction.
~s One of the advantages of the present invention is to overcome this kind of problem. The amino functionality of the aminoimidazoles can be utilised for further reactions, such as acylation or alkylation reactions. For example, acyl chlorides, sulfonyl chlorides or alkyl halides can be used as source of diversity and will enhance the diversity of the aminoimidazoles. The Tandem reaction concept by coupling a multi component reaction zo with an additional alkylation or acylation step makes the whole process highly efficient with respect to the final diversity of the aminoimidazoles synthesized. The present invention also have a postitive impact on the size and the speed by which a library can be generated. The tandem 3CC+1 strategy has enhanced the diversity of the fused 3-aminoimidazoles by using 3 non-exhaustive sources of diversity, i. e. acyl chlorides, alkyl zs halides and sulfonyl chlorides. The typical procedures for the synthesis of these compounds are described below in Example 3.
The polymeric support of the present invention can also be used in general organic chemistry manipulations, such as cycloaddition reactions, as a dehydrating agent or as a scavenger, e.g. for the removal of alkyl halides, phosphines, acid chlorides, aldehydes and ketones.
Kits s The present invention also provides a kit for use in solution and solid-phase synthesis. The kit includes a functionalized polymeric reagent of the present invention, i.e.
for use in solution and solid phase chemistry, preferably in a container or package.
io Intermediates It is an object of the present invention to provide new intermediates for use in the preparation of the novel functionalized polymeric reagents.
is Useful intermediates according to the present invention are compounds of Formula II
O
H' NH Rs R' R Ra ~ i X
polymer (II) wherein X is carbon, oxygen, a PEG-chain, or a -(CH~)n-CONH- group Zo Rl is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, Ct-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, CI-C6 alkyl, C~-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
2s Preferred intermediates of the present invention are the following compounds;
O
' 'H
HN
/ R
O
O
NH' _H
O
/ O
O
i R
O
' _H
NH
O
i R
O
H' \
/ O
R
O
i R
O
H' NH CI
R
wherein, R represents the polymeric support either directly attached to the linker or through a spacer moiety, such as a PEG-chain or a -(CH~)n-CONH- group.
s EXAMPLES
Example 1. Preparation of Functionalized Polymeric Reagent io The starting MAMP amino resin ( 1 gr; 1.64mmo1/g) was pre-swollen in DMF
for 10 minutes. To this resin was added a solution of 2,4,5-trichlorophenyl formate (560mg;
2.46mmol, l.5eq) in 10 mL of DMF. The reaction mixture was agitated at room temperature for 12h. The resin was filtered and washed with DMF (2x10mL), DCM
(2x l OmL), MeOH (2x l OmL) and finally dry under vacuum for 1 hour. The resin gives a is negative chloranil test, which indicates completion of the reaction. The resin (1.64mmol) was thereafter washed with dry dichloromethane (2x l OmL), pre-swollen in dry dichloromethane for 10 min, and filtered. A solution of triphenylphosphine (2.168, 8.2mmol, Seq), carbon tetrachloride (1.27g, 8.2mmol, Seq) and triethylamine (830mg, 8.2mmol, Seq) in dry dichloromethane lOmL was added followed by a few activated zo molecular sieves (4A). The reaction mixture was shaken at room temperature for 3 hours.
The resin was filtered, and washed with dichloromethane (2xlOmL), methanol (2xlOmL), and dichloromethane was added to afford the separation of the floating resin from the molecular sieves. The resin was washed with IOmL dichloromethane and diethyl ether (2x IOmL) and dried under vacuum for 12h. The resin was then kept under nitrogen at room temperature in the dark for 6 months without any modifcation of its efficiency.
Example 2. Resin Capture Strategy for the synthesis of fused 3-amino imidazoles.
s The heteroaromatic amidine (323~mo1, 200mo1%), the aldehyde (323umo1, 200mo1%) and the catalyst Sc(OTf)3 (16.2~mol, lOmol%) in 1mL of a solution of DCM:MeO'H
(3:1) were incubated for 30min. The resin isonitrile linker ( 100mg, 163~mo1, 100mo1%) was preswollen for 20 minutes in DCM and the resin filtered. The solution of aldehyde, ~o heteroaromatic amidines and catalyst was then added to the resin and the solution was shaken for 2 days at room temperature. The resin filtered and washed with DCM(2x3mL), MeOH(2x3mL), 20%DIPEA in DCM(3mL) and DCM(2x3mL). A sample of the resin (3-SmD) was cleaved from the resin with a solution DCM:4M HCl in dioxane(1:1) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding ~s the expected product in high purity (75-99%).
~N+ C- N
Rz HzN I Rz \
N
R
O R, Sc(OTf)3 ~NH
DCM/MeOH
D
R3_Y
DIPEA
N N
Rz \~ TFA:DCM Rz \
HN R N R
\R3 F ~ \R3 E
= Polystyrene Supported R3 = RSOz, RCHz; RCO
MAMP linker Y = CI, Br Scheme I. Enhancement of diversity by reacting the nitrogen atom, involved in an amine bond with the polymeric support, of the fzrsed 3-aminoimida~ole with various electrophiles.
Exemple 3. Synthesis of amide substituted fused 3-aminoimidazoles s Resin-bound compound D (60mg, 74~mo1, 100mo1%) was preswollen in DCM for 20 minutes and the resin filtered. A solution of acyl chloride (370~.mol, SOOmoI%) and DIPEA
(600~mo1, SOOmoI%) in 1mL of DCM was added to the resin-bound compound D and the reaction mixture was agitated for 20h at room temperature. The resin was filtered and ~o washed with DCM (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-Smg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity (75-99%).
is Exemple 4. Synthesis of alkylated 3-aminoimidazoles.
Resin-bound compound D (60mg, 74~.mol, 100mo1%) was preswollen in DMF for 20 minutes and the resin filtered. A solution of alkyl halides (370~mo1, SOOmoI%) and DIPEA
(740~mo1, 1000mo1%) in l.2mL of DMF was added to the resin-bound compound D
and 2o the reaction mixture was agitated for 20h at 80°C. The resin was filtered and washed with DMF (2x3mL), DCM (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-~mg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity (75-99%).
Exemple ~. Synthesis of sulfonamide substituted 3-aminoimidazoles.
Resin-bound compound D f 60mg, 74~mo1, 100mo1%) was preswollen in DCM for 20 minutes and the resin filtered. A solution of sulfonyl chlorides (370~mo1.
SOOmoI%) and 3o DIPEA (740~mo1, 1000mo1~'o) in 1.2mL of DCM:Dioxane ( 1:1 ) was added to the resin-bound compound D and the reaction mixture was agitated for 20h at 60°C.
The rein was filtered and washed with DCM (2x3mL), Dioxane (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-Smg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity.
O
R
C~ N+
\ \
O
O
i R
//N:
C
R
wherein R is a polymer directly attached to the linker or through a PEG-chain or a -s (CH2)n-CONH- group.
The following definitions shall apply throughout the specification and the appended claims:
~o The term " functionalized polymeric reagent" denotes a reagent that is covalently attached to a linker moiety, and said linker is covalently attached to a polymer.
The term "polymeric support" denotes a polymer covalently attached to a linker moiety, which can optionally further be attached to a substrate compound.
The term "linker" denotes a reactive functional group that can be used to link molecules is onto polymeric supports.
The term "acid labile isonitrile" denotes an isonitrile moiety which is cleaved from the linker when treated with aqueous trifluoroacetic acid (95%) at room temperature with a half time of less than 30 minutes.
The term "substrate compound" denotes a compound to be modified in a subsequent ~o reaction step.
The term "immobilize" denotes the act of linking, e.g. a substrate compound, by means of chemical or biological procedure to a polymeric support.
The term "multicomponent reaction" denotes a one-pot reaction that form products from at least three different starting materials and incorporate substantial portions of these reagents s into the product. This includes reactions involving at lest three different functional groups, some of which may be parts of the same reagent molecule.
The term "variegated population" denotes a population including at least two different chemical entities, e.g., of different chemical structure. For example, a "variegated population" of nucleophiles would comprise at least two different nucleophiles.
io The term "substituted phenyl" denotes a phenyl group substituted with at least one of the following; C,-C6 alkyl, C1-C6 alkoxy, halogen, or phenoxy group.
The term "formylating reagent" denotes a reagent that can convert an amino group into a formamido group.
is Polymeric supports The choice of the soluble or insoluble polymer of the polymeric support is not crucial.
Suitable soluble and insoluble polymers therefore consists of those known to the skilled artisan in the art of solution or solid-phase synthesis. Examples of suitable insoluble ~o polymer include, but is not limited to, inorganic substrates, e.g.
kieselguhr, silica gel and controlled pore glass, and polymeric organic substrates, e.g. polystyrene, polypropylene, polyethylene glycol, , as well as composite inorganic/polymeric substrates such as polyacrylamide supported within a matrix of kieselguhr particles. Preferred insoluble polymers are 1 % DVB polystyrene and polystyrene-PEG.
Examples of suitable soluble polymers include, but is not limited to, polystyrene (not cross-linked, polyvinyl alcohol, polyethylene imine, polyacrylic acid, polymethylene oxide, PEG, polypropylene oxide, cellulose, polyacrylamide, PEG with 3,5-diisocyanatobenzyl chloride. PEG with 3-nitro-3-azapentane 1,5-diisocyanate, polyvinyl alcohol-poly( 1-vinyl-?-pyrrolidinone, polystyrene-polyvinyl-substituted monosaccharides), poly(N-isopropylacrylamide)-poly(acrylic acid derivatives).
By replacing insoluble polymers with soluble polymers the familiar reaction conditions of s classical organic chemistry is reinstated, and yet product purification is still facilitated through application of macromolecular properties. The present invention thereby avoids the difficulties of solid-phase synthesis while preserving its positive aspects.
Linkers to The choice of the linker is not limited to MAMP resin (amino-(4-methoxyphenyl)methyl polystyrene) (A), and therefore also includes, but is not limited to, Rink amide (B), Wang amino (C), Sasrin amino (D), Sieber amide (E) and 2-chlorotrityl linker (F) shown in Figure 2 below.
NHZ O~ NH2 / \~ R ~ / \~~ O
O O i R
A B
NHZ NHZ O/
/ O
R
C D R
/ ( / O
O
i R R
E
Figure 2. Linkers F
In figure 2, R represents the polymeric support either directly attached to the linker or s through a spacer moiety, such as a PEG-chain or a -(CH2)n-CONH- group.
Preparation of Functionali.-ed Polymeric Reagents A simple synthesis of a functionalized polymeric reagent is schematically shown in Figure ~0 3 and described in more detail in Example 1.
O
NH2 ~
HN"H
2,4,5-trichlorophenylformate, DMF \
Pol ~ ~ O
Pol I ~ I ~ O
Revill-Brown linker 1.64 mmol/g (Chloranil test --) (Chloranil test +++) CCI4, PPh3, Et3N, DCM
C~ N+
Pol I ~ I ~ O
Isonitrile stretch, v max = 2138 cm-' Figure 3. Synthesis of a Functionalized Polymeric Reagent In this example, the functionalized resin is prepared by mixing a polymeric support (for example, amino MAMP linker 100-200 mesh or 200-400 mesh, commercially available from Novabiochem) in a polar solvent (e.g., DMF) with a suitable "formylating"
reagent, e.g. 2,4,5-trichlorophenylformate, as shown in figure 3. The reaction can be performed at room temperature or, in certain embodiments, at elevated temperature to ensure completeness of reaction and/or to decrease reaction times. The time required for the ~o reaction can range from about 3 hours to 24 hours or more: an exemplary reaction time is 12 hours at room temperature.
The formed formamido intermediate is thereafter reacted at room temperature with carbon tetrachloride (CC14) / triphenylphosphine (PPh3) in a non-polar solvent, e.g.
is dichloromethane (DCM) for approximately 3 hours in the presence of a base, e.g.
triethylamine (Et3N) to give the corresponding isonitrile.
This procedure has the advantage that is requires only a minimum number of synthetic steps, uses readily available reagents, and provides a functionalized polymeric reagent in good yield with simple purification steps.
Completeness of reaction with the functionalized polymeric reagent or polymeric supportcan be assessed according to standard techniques such as microanalysis, spectroscopic analysis, or by colorimetric tests. For example, the formation of an isonitril moiety can be monitored by Fourier-transform infra-red spectroscopy (FT-IR), e.g., by monitoring the isonitril stretch at 2138 cm 1. Once the reaction has reached a pre-selected ~o endpoint, the resin is preferably purified by washing. To ensure removal of excess reagents, several cycles of washing, preferably with solvents of a variety of polarities, can be carried out.
Once the functionalized polymeric reagent or polymeric support has been prepared and ~s washed it is stable at room temperature for long periods of time. The functionalized polymeric reagent can be stored for extended periods of time without loss of activity.
Cleavage of Compounds from the Polymeric Support Zo It will be appreciated from the foregoing that the present invention provides a functionalized polymeric reagent, comprising an acid labile isonitrile moiety for use in solution and solid-phase synthesis. Compounds can be cleaved from the polymeric support with a variety of acids including, but not limited, to the following; TFA in DCM (20%). 4 M HCl in dioxane, HF, acetic acid in DCM (8090). A person skilled in the art can easily zs optimize the conditions to get the best possible result in the cleavage step. In general, the resin-bound compounds are preswollen in DCM for 10 min, the resin filtered and a solution of DCM:TFA:water (80:18:2) or 4M HC1 in Dioxane was added and the reaction mixture was agitated for 1 hour at room temperature. The solution is filtered and evaporated to give the crude final compound.
Synthesis of Organic Compounds on the Polymeric Support The present invention provides a method for synthesizing organic compounds by solution or solid-phase synthesis. In one embodiment, the method includes the steps of immobilizing a substrate compound on a polymeric support and at a later stage, cleaving the product from the polymeric support with an acid. As described in more detail belo~;~, in certain embodiments, the substrate compound is provided as a variegated population of substrate compounds, such that a library of organic compounds can be prepared.
~o Persons skilled in the art will appreciate that the immobilized substrate compound can be chemically manipulated while attached to the polymeric support. Thus, in certain embodiments, the method for synthesizing organic compounds by solution or solid-phase synthesis can include a plurality of further reaction steps, after the immobilizing step but vs before the cleaving step. Such synthetic manipulations include reactions, which are standard in solution and solid-phase synthesis. The reaction conditions for such manipulations will generally be selected to avoid cleavage of the substrate compound from the support, unless such concomitant cleavage is desired.
zo Combinatorial Chemistry on the Polymeric Support Functionalized polymeric reagents of the present invention are suitable for use in combinatorial chemistry. Accordingly, in another aspect, the invention provides a method for the solution or solid-phase supported chemical synthesis of libraries. In one zs embodiment, the method comprises the step of reacting a substrate compound, which is immobilized on a polymeric support of the invention, with reagent molecules under conditions such that a library of compounds is prepared. In this embodiment, at least one of the substrate compound or the reagent molecule is provided as a variegated population thereof. It will be appreciated that the method can include the step of cleaving the library of compounds from the polymeric support. Such a cleavage step can be concomitant with the reacting step, or, in certain embodiments, can be a separate cleavage step.
Combinatorial libraries can be screened to determine whether any members of the library s have a desired activity, and, if so, to identify the active compounds.
Soluble compound libraries can be screened by affinity chromatography with an appropriate receptor to isolate ligands for the receptor, followed by identification of the isolated ligands by conventional techniques (e.g., mass spectrometry, NMR, and the like). Contacting the compounds with a soluble receptor can screen immobilized compounds; preferably, the soluble receptor is ~o conjugated to a label (e.g., fluorophores, calorimetric enzymes, radioisotopes, luminescent compounds, and the like) that can be detected to indicate ligand binding.
Alternatively, immobilized compounds can be selectively released and allowed to diffuse through a membrane to interact with a receptor.
is Combinatorial libraries of compounds can also be synthesized with "tags" to encode the identity of each member of the library. In general, this method features the use of inert, but readily detectable, tags that are attached to the solid support or to the compounds. When an active compound is detected (e.g., by one of the techniques described above), the identity of the compound is determined by identification of the unique accompanying tag. This ~o tagging method permits the synthesis of large libraries of compounds that can be identified at very low levels.
A variegated population of substrate compounds can provide diversity in a combinatorial synthesis. Several methodologies have been developed to perform combinatorial ~s chemistry. Examples of such methodologies include, but is not limited to, the mix and split technology and IRORI MiniKans.
Multicomponent Reactions on the Polymeric Support IS
The polymeric support of the invention is suitable for use with multicomponent reactions, but not limited to them. Multicomponent reactions have become increasing common and have been extensively reviewed see e.g. Lute Weber, Svnlett 1999, no 3, 366-3?-l: IL'evin Short, Tetrahedron vol.~3, nol9, 663-6679, 199': Sang Kim, Tetrahedron Letters, 39 s (1998) 6993-6996; Blacburn. Tetrahedron Letters (1998) 39, ~-t69-~-t72, Bienayme , Angew. Chem. Int. Ed (1998) 37. no 16; Blackburn 39, (1998) 363-3638 Tetrahedron Letters.
In a multicomponent reaction three or more component molecules can react simultaneously io or close to simultaneously with each other to provide a molecule which has incorporated substantial portions of these reagent molecule without any isolation of intermediates. This includes reactions involving at least three different functional groups, some of which may be parts of the same reagent molecule. In general a multicomponent reaction is sequences of bimolecular reaction steps that proceed according to the zipper principle, i.e. each is reaction step is a prerequisite for the following step. Examples of multicomponent reactions include but are not limited to, a-aminoalkylation (Mannichj, Passeriini, Ugi and Ugi-type. Ugi and Ugi-type reactions are preferred multicomponent reactions to be used with the polymeric supports of the present invention. Ugi and Ugi-type reactions give access to compounds and functionalities of great interest for a medicinal chemist, e.g.
zo heterocyclic compounds.
Accordingly, in another aspect, the invention provides methods for the multicomponent synthesis of organic compounds. In one embodiment, the method comprises the step of reacting the isonitrile moiety with at least two reagent molecules simultaneously under ~s conditions such that a multicomponent reaction is achieved.
A preferred embodiment of the present invention is schematically shown below in Figure 4.
c~
, ~N
\ \
I
I ~ ~
Pol O
H_N R, R~
~O
Heterocyclic Multicomponent Reaction (of Ugi-type) ' H
Sc(OTf)3 DCM:MeOH (3.1) R' R, N~ R, TFA:DCM 2 R'X N
N~~ ~ R NH
TFA:DCM R2~
R2 \ \ H R
NH~
Pol I ~ I ~ O
Figure =1. Heterocyclic ILlulticomponent Reaction The preferred embodiment shown in Figure 4 is advantageous since it allows a multicomponent reaction to be performed directly onto the acid labile isonitrile moiety of the functionalized polymeric reagent.
The example outlined above consists of a multicomponent Ugi-type condensation wherein the isonitrile moiety of the functionalized polymeric reagent is reacted with 2 different io source of diversity. aldehydes and heteroaromatic amidines. This Ugi-type reaction leads efficiently and in a one step process to the fused 3-aminoimidazoles, using the resin capture strategy. The final compounds are of high purity after acid cleavage.
3-aminoimidazoles has been synthesized according to the present invention. A
wide range is of aldehydes and heteroaromatic amidines was utilised to test the functionalized polymeric reagent and showed the efficiency of the resin capture by obtaining a high yield and excellent purity of the final products. Typical procedure for the synthesis of fused 3-aminoimidazoles by Ugi type reaction and resin capture strategy is described in Example 3, below.
The fused 3-aminoimidazoles contains a nitrogen atom, involved in an amine bond with the polymeric support, which can be further reacted with various electrophilic molecules, e.g. acyl halides, alkyl halides, or sulfonyl halides, and thereafter, be cleaved from the s polymeric support. This tandem reaction process (MCR + acylation/alkylation) increases the diversity which can be introduced onto the 3-fused aminoimidazole core.
The thereby introduced additional diversity is a further advantage of the present invention, since the access of these compounds by traditional solution-phase without polymeric support is cumbersome, since the corresponding isonitriles are either not commercially available or ~o time-consuming to synthesize. Due to the low number of commercially available isonitriles able to be utilised in combinatorial chemistry (<20) and the cost and time-consumption of custom syntheses, the isonitriles have always been the poorest source of diversity involves in the Ugi reaction.
~s One of the advantages of the present invention is to overcome this kind of problem. The amino functionality of the aminoimidazoles can be utilised for further reactions, such as acylation or alkylation reactions. For example, acyl chlorides, sulfonyl chlorides or alkyl halides can be used as source of diversity and will enhance the diversity of the aminoimidazoles. The Tandem reaction concept by coupling a multi component reaction zo with an additional alkylation or acylation step makes the whole process highly efficient with respect to the final diversity of the aminoimidazoles synthesized. The present invention also have a postitive impact on the size and the speed by which a library can be generated. The tandem 3CC+1 strategy has enhanced the diversity of the fused 3-aminoimidazoles by using 3 non-exhaustive sources of diversity, i. e. acyl chlorides, alkyl zs halides and sulfonyl chlorides. The typical procedures for the synthesis of these compounds are described below in Example 3.
The polymeric support of the present invention can also be used in general organic chemistry manipulations, such as cycloaddition reactions, as a dehydrating agent or as a scavenger, e.g. for the removal of alkyl halides, phosphines, acid chlorides, aldehydes and ketones.
Kits s The present invention also provides a kit for use in solution and solid-phase synthesis. The kit includes a functionalized polymeric reagent of the present invention, i.e.
for use in solution and solid phase chemistry, preferably in a container or package.
io Intermediates It is an object of the present invention to provide new intermediates for use in the preparation of the novel functionalized polymeric reagents.
is Useful intermediates according to the present invention are compounds of Formula II
O
H' NH Rs R' R Ra ~ i X
polymer (II) wherein X is carbon, oxygen, a PEG-chain, or a -(CH~)n-CONH- group Zo Rl is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, Ct-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, CI-C6 alkyl, C~-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
2s Preferred intermediates of the present invention are the following compounds;
O
' 'H
HN
/ R
O
O
NH' _H
O
/ O
O
i R
O
' _H
NH
O
i R
O
H' \
/ O
R
O
i R
O
H' NH CI
R
wherein, R represents the polymeric support either directly attached to the linker or through a spacer moiety, such as a PEG-chain or a -(CH~)n-CONH- group.
s EXAMPLES
Example 1. Preparation of Functionalized Polymeric Reagent io The starting MAMP amino resin ( 1 gr; 1.64mmo1/g) was pre-swollen in DMF
for 10 minutes. To this resin was added a solution of 2,4,5-trichlorophenyl formate (560mg;
2.46mmol, l.5eq) in 10 mL of DMF. The reaction mixture was agitated at room temperature for 12h. The resin was filtered and washed with DMF (2x10mL), DCM
(2x l OmL), MeOH (2x l OmL) and finally dry under vacuum for 1 hour. The resin gives a is negative chloranil test, which indicates completion of the reaction. The resin (1.64mmol) was thereafter washed with dry dichloromethane (2x l OmL), pre-swollen in dry dichloromethane for 10 min, and filtered. A solution of triphenylphosphine (2.168, 8.2mmol, Seq), carbon tetrachloride (1.27g, 8.2mmol, Seq) and triethylamine (830mg, 8.2mmol, Seq) in dry dichloromethane lOmL was added followed by a few activated zo molecular sieves (4A). The reaction mixture was shaken at room temperature for 3 hours.
The resin was filtered, and washed with dichloromethane (2xlOmL), methanol (2xlOmL), and dichloromethane was added to afford the separation of the floating resin from the molecular sieves. The resin was washed with IOmL dichloromethane and diethyl ether (2x IOmL) and dried under vacuum for 12h. The resin was then kept under nitrogen at room temperature in the dark for 6 months without any modifcation of its efficiency.
Example 2. Resin Capture Strategy for the synthesis of fused 3-amino imidazoles.
s The heteroaromatic amidine (323~mo1, 200mo1%), the aldehyde (323umo1, 200mo1%) and the catalyst Sc(OTf)3 (16.2~mol, lOmol%) in 1mL of a solution of DCM:MeO'H
(3:1) were incubated for 30min. The resin isonitrile linker ( 100mg, 163~mo1, 100mo1%) was preswollen for 20 minutes in DCM and the resin filtered. The solution of aldehyde, ~o heteroaromatic amidines and catalyst was then added to the resin and the solution was shaken for 2 days at room temperature. The resin filtered and washed with DCM(2x3mL), MeOH(2x3mL), 20%DIPEA in DCM(3mL) and DCM(2x3mL). A sample of the resin (3-SmD) was cleaved from the resin with a solution DCM:4M HCl in dioxane(1:1) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding ~s the expected product in high purity (75-99%).
~N+ C- N
Rz HzN I Rz \
N
R
O R, Sc(OTf)3 ~NH
DCM/MeOH
D
R3_Y
DIPEA
N N
Rz \~ TFA:DCM Rz \
HN R N R
\R3 F ~ \R3 E
= Polystyrene Supported R3 = RSOz, RCHz; RCO
MAMP linker Y = CI, Br Scheme I. Enhancement of diversity by reacting the nitrogen atom, involved in an amine bond with the polymeric support, of the fzrsed 3-aminoimida~ole with various electrophiles.
Exemple 3. Synthesis of amide substituted fused 3-aminoimidazoles s Resin-bound compound D (60mg, 74~mo1, 100mo1%) was preswollen in DCM for 20 minutes and the resin filtered. A solution of acyl chloride (370~.mol, SOOmoI%) and DIPEA
(600~mo1, SOOmoI%) in 1mL of DCM was added to the resin-bound compound D and the reaction mixture was agitated for 20h at room temperature. The resin was filtered and ~o washed with DCM (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-Smg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity (75-99%).
is Exemple 4. Synthesis of alkylated 3-aminoimidazoles.
Resin-bound compound D (60mg, 74~.mol, 100mo1%) was preswollen in DMF for 20 minutes and the resin filtered. A solution of alkyl halides (370~mo1, SOOmoI%) and DIPEA
(740~mo1, 1000mo1%) in l.2mL of DMF was added to the resin-bound compound D
and 2o the reaction mixture was agitated for 20h at 80°C. The resin was filtered and washed with DMF (2x3mL), DCM (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-~mg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity (75-99%).
Exemple ~. Synthesis of sulfonamide substituted 3-aminoimidazoles.
Resin-bound compound D f 60mg, 74~mo1, 100mo1%) was preswollen in DCM for 20 minutes and the resin filtered. A solution of sulfonyl chlorides (370~mo1.
SOOmoI%) and 3o DIPEA (740~mo1, 1000mo1~'o) in 1.2mL of DCM:Dioxane ( 1:1 ) was added to the resin-bound compound D and the reaction mixture was agitated for 20h at 60°C.
The rein was filtered and washed with DCM (2x3mL), Dioxane (2x3mL), MeOH (2x3mL), and DCM(2x3mL). A sample of the resin (3-Smg) was cleaved from the resin with a solution of DCM:TFA:water (80:18:2) for 1h at room temperature. The residue was dried under vacuo and analysed by LC-MS, yielding the expected product in high purity.
Claims (15)
1. A functionalized polymeric reagent for solution and solid-phase synthesis comprising a polymer and a linker moiety characterized in that the linker comprises an acid labile isonitrile moiety.
2. A functionalized polymeric reagent for solution and solid-phase synthesis of Formula I
wherein X is carbon, oxygen, a PEG-chain, or a -(CH2)n-CONH- group, R1 is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
wherein X is carbon, oxygen, a PEG-chain, or a -(CH2)n-CONH- group, R1 is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
3. The functionalized polymeric reagent according to claims 1 or 2 being, wherein R is a polymer directly attached to the linker or through a -(CH2)n-CONH-group,or a PEG-chain.
4. The functionalized polymeric reagent according to any of claims 1-3, characterized in that the polymer is a soluble polymer.
5. The functionalized polymeric reagent according to any of claims 1-3, characterized in that the polymer is an insoluble polymer.
6. A method for preparing a functionalized polymeric reagent according to claims 1-5, comprising the step of, a) reacting the polymeric support with a formylating reagent;
b) converting the thereby formed formamido group into an isonitrile moiety.
b) converting the thereby formed formamido group into an isonitrile moiety.
7. The method according to claim 6, characterized in that the formylating reagent used in step a) is 2,4,5-trichlorophenyl formate.
8. The method according to claim 6 and 7, characterized in that the reagent used in step b) is carbon tetrachloride / triphenylphosphine in the presence of triethylamine.
9. A method for preparing an organic compound by solution and solid-phase synthesis comprising the steps of a) immobilizing a substrate compound to the isonitrile moiety of the functionalized polymeric reagent according to claims 1-4 b) performing at least one further reaction step, and c) cleaving the compound from the polymeric support by acid treatment.
10. The method according to claim 9 comprising an additional reaction step after the cleavage from the polymeric support.
11. The method according to claim 9, characterized in that the method is performed with a plurality of substrate compounds and/or plurality of further reaction steps to give a library of organic compounds.
12. The method according to claim 9, characterized in that at least one of the reaction steps is a multicomponent reaction.
13. A kit comprising a container of a functionalized polymeric reagent according to claims 1-4.
14. Intermediate compounds of Formula II
wherein X is carbon, oxygen, a PEG-chain, or a -(CH2)n-CONH- group, R1 is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
wherein X is carbon, oxygen, a PEG-chain, or a -(CH2)n-CONH- group, R1 is hydrogen, phenyl, or substituted phenyl group, R2 is hydrogen, phenyl, or substituted phenyl group, R3 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, R4 is hydrogen, C1-C6 alkyl, C1-C6 alkoxy, or phenoxy, and n is an integer from 1 to 4.
15. Compounds according to claim 13 being wherein, R represents the polymeric support either directly attached to the linker or through a spacer moiety, such as a PEG-chain or a -(CH2)n-CONH- group.
Applications Claiming Priority (3)
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SE9904222A SE519326C2 (en) | 1999-11-22 | 1999-11-22 | Functionalized polymeric reagents comprising an acid labile isonitrile moiety and process for its preparation |
SE9904222-8 | 1999-11-22 | ||
PCT/SE2000/002263 WO2001037983A1 (en) | 1999-11-22 | 2000-11-16 | New functionalized polymeric reagents |
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CA2389953A1 true CA2389953A1 (en) | 2001-05-31 |
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ID=20417810
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CA002389953A Abandoned CA2389953A1 (en) | 1999-11-22 | 2000-11-16 | New functionalized polymeric reagents |
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EP (1) | EP1239949A1 (en) |
JP (1) | JP2003514876A (en) |
AU (1) | AU769893B2 (en) |
CA (1) | CA2389953A1 (en) |
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WO (1) | WO2001037983A1 (en) |
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DE10150077B4 (en) * | 2001-10-10 | 2004-07-29 | Morphochem Aktiengesellschaft für kombinatorische Chemie | Process for the preparation of polymer-bound isonitriles |
DE10162134A1 (en) * | 2001-12-18 | 2003-07-10 | Morphochem Ag Ag Fuer Kombinat | Resin-bound isonitriles |
FR2856061A1 (en) * | 2003-06-11 | 2004-12-17 | Chrysalon | ORTHO-CONDENSED POLYCYCLIC DERIVATIVES OF AMINOPYRROLE SUBSTITUTING CHEMOTHERAPY COMBINATORIAL ELECTROATRATEERS OF SAID DERIVATIVES AND PROCESS FOR OBTAINING THEM |
US7476725B2 (en) | 2004-06-08 | 2009-01-13 | Alza Corporation | Preparation of macromolecular conjugates by four-component condensation reaction |
AU2012351967A1 (en) | 2011-12-16 | 2014-07-17 | Massachusetts Institute Of Technology | Alpha-aminoamidine polymers and uses thereof |
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US4812532A (en) * | 1987-07-29 | 1989-03-14 | Bio-Affinity Systems, Inc. | Solid phase oxime reagent |
AU1589099A (en) * | 1997-11-18 | 1999-06-07 | Rhone-Poulenc Rorer Pharmaceuticals Inc. | Functionalized resin for the synthesis of amides and peptides |
-
1999
- 1999-11-22 SE SE9904222A patent/SE519326C2/en not_active IP Right Cessation
-
2000
- 2000-11-16 EP EP00981995A patent/EP1239949A1/en not_active Withdrawn
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SE9904222D0 (en) | 1999-11-22 |
AU769893B2 (en) | 2004-02-05 |
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WO2001037983A1 (en) | 2001-05-31 |
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