[go: up one dir, main page]

AU783951B2 - A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses - Google Patents

A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses Download PDF

Info

Publication number
AU783951B2
AU783951B2 AU58724/01A AU5872401A AU783951B2 AU 783951 B2 AU783951 B2 AU 783951B2 AU 58724/01 A AU58724/01 A AU 58724/01A AU 5872401 A AU5872401 A AU 5872401A AU 783951 B2 AU783951 B2 AU 783951B2
Authority
AU
Australia
Prior art keywords
dye
fluorescence
fluorescent
color
under
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
AU58724/01A
Other versions
AU5872401A (en
Inventor
Anutosh Ganguly
Usha Goswami
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Council of Scientific and Industrial Research CSIR
Original Assignee
Council of Scientific and Industrial Research CSIR
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Council of Scientific and Industrial Research CSIR filed Critical Council of Scientific and Industrial Research CSIR
Priority claimed from PCT/IN2001/000082 external-priority patent/WO2002079327A1/en
Publication of AU5872401A publication Critical patent/AU5872401A/en
Application granted granted Critical
Publication of AU783951B2 publication Critical patent/AU783951B2/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

Links

Landscapes

  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
  • Inks, Pencil-Leads, Or Crayons (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Cosmetics (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
  • Agricultural Chemicals And Associated Chemicals (AREA)
  • Compounds Of Unknown Constitution (AREA)
  • Paints Or Removers (AREA)

Description

A NATURAL FLUORESCENT DYE OBTAINED FROM A MARINE INVERTEBRATE COMPOSITIONS CONTAINING THE SAID DYE AND THEIR
USES
TECHNICAL FIELD The present invention relates to a novel natural fluorescent dye and in particular to such a dye obtained from a marine animal invertebrate, especially sea cucumbers and particularly Holothuria scabra. The invention also provides a process for the extraction, purification and characterization of this new dye which is a natural dye from marine invertebrate, especially sea cucumber. Sea cucumbers are echinoderms, members of the group of spiny skinned animals that also includes starfishes and sea urchins. They have the following taxonomic position.
BACKGROUND ART The said sea cucumber has following taxonomic position.
Subkingdom: Metazoa Phylum: Echinodermata Sub-Phylum: Eleutherozoa Class: Holothuroidea Subclass: Aspidochirotacea, Dendrochirotacea, Apodacea Order: Dendrochirota, Aspidochirota, Elasipoda Molpadonia and Apoda Amongst these orders sea cucumber Holothuria scabra belongs to: Order Aspidochirota Family: Holothuriidae Genus:Holothuria o S. 25 Species: scabra Echinoderms are coelomate invertebrates which are exclusively marine, never colonial, are unsegmented with a basic pentameric radial, symmetry in the adult form, no head or brain, and distinguished from all other animals by structural peculiarities of the skeleton and coelom. Class Holothuroidea has animals with body bilaterally symmetrical, usually 30 elongated in the oral-aboral axis having mouth at or near one end and anus at or near the other end. The body surface is coarse, endoskeleton reduced to microscopic spicules or plates embedded in the body wall, mouth surrounded by a set of tentacles attached to water vascular system; podia or tube feet are usually present and locomotory; alimentary canal is long and coiled and cloaca usually with respiratory trees; sexes are usually separate and gonad single or paired tuft of tubules. They are sedentary forms either attached to hard substrate or burrow into soft sediments with anterior and posterior ends projected. They occur in all seas chiefly in shallow waters, a few species occur in depths greater than 1000 meters. The species Holothuria scabra also called by some as Metriatyla scabra Jaegea is widely distributed in East Africa, red Sea, Bay of Bengal, East India, Australia, Japan, South Pacific, Philippines, Indian Ocean and other Indo-Pacific regions. It is used for human/animal consumption in Sabah, Malaysia and Indonesia and other Indo-Pacific countries.
Pigments belong to the categories of inorganic and organic types. The former are the inorganic chemistry compounds which are used for various decorative and painting purposes etc. Organic pigments like organic dyes date back to the ancient times. The use of dyes from plants like Brazil wood, log-wood, Persian berry indigo and madder are reported from near east and far eastern countries even before Biblical times George L. Clark, 1966 Encyclopaedia of chemistry, 2 nd ed. Pages 833-835). Debra K. Hobson and David S.
Wales describe "Green dyes" which are produced as secondary metabolites from some groups of living organisms like fungi, blue green algae, sea urchins, star fishes arthropods and coral reef coelenterates (Journal of the Society of Dyers and Colourists (JSDC), 114, 42-44, 1998). These are anthraquinone compounds, historically of crucial importance in the dyestuffs industry. Stainsfile Dyes A gives Dye Index of 264 dyes. Out of which only six are natural dyes from all types of living organisms 20 http://members.pgonline.com/-bryand/dyes/dyes.htm Recently, several patents have been published about natural dyes but majority of them are from plants. Wrolstad, et al. Described natural colorant from potato extract (US Patent No.
e 6,180,154 published on January30, 2001). Shrikhande, Anil J in US patent No. 4,452,822 published on June 5, 1984 reported extraction and intensification of anthocyanins from grape pomace and other material. Lenoble, et al. US patent No. 5,908,650 released on June 1, 1999 described a new composition to enhance the red color of anthocyanin pigment.
Carotenoid-producing bacterial species are disclosed in two US patents Number 5,935,808 published on August 10, 1999, inventors Hirschberg, et al. and 5.858,761 January 12, 1999 inventors Tsubokura, et al. Collin; Peter Donald in his US patent No. 6,055,936 published 30 on May2, 2000 disclosed sea cucumber carotenoid lipid fractions and process.
All these colorants and dyes are however not fluorescent. Fluorescent dyes most of which are synthetic are disclosed in several US and International patents. These have been used in variety of applications. The amount of patents in this field show the importance of these dyes.
Synthetic parazoanthoxanthin A (m.w.214.2), emitting fluorescence at lambda (em) 420 nm, was found to be a pure competitive inhibitor of cholinesterases. Sepcic K, Turk T, Macek P (Toxicon, 36 937-940,1998). Welch; David Emanuel (US patent No.
5,989,135 released on date November 23,1999 disclosed a luminescent golf ball. White et al. (US patent No. 6,110,566, dated August 29, 2000 and W09920688) described a flexible polyvinyl chloride film that exhibits durable fluorescent colors.
Dipietro Thomas C (International patent W09938916) disclosed the use of fluorescent polymeric pigments in variety of paints, inks and textiles. Cramer Randall J (Patent No.
EP0206718 published on 30 December, 1986) described a composition with fluorescent dye for bleaching and brightening of polymer.
Leak detection is another utility disclosed by some Leighley; Kenneth C. US patent 6,056,162 dated 2 may, 2000). Cooper et al. US patent 6,165,384 published on December 26, 2000 disclosed a full spectrum fluorescent dye composition for the same purposes.
Lichtwardt et al. US patent 5,902749 dated May 11,1999 use fluorescent dye in an automated chemical metering system.
The reports from marine animals are few. A green fluorescent protein GFP a novel reporter gene has been described from the pacific jellyfish, Aequora aequora by Shimomura, O, Johnson, F.H. and Saiga, Y (Journal of cellular and comparative physiology, 59, 223-239, 1962). GPF is characterized by the presence of highly fluorescent 20 chromatophore. Purified GFP absorbs blue light maximally at 395 nm with a minor peak at *g S470 nm and emits green light. Sepcic K, Turk T, Macek P reported a fluorescent zoanthid pigment, parazoanthoxanthin A. Toxicon, 36 937-940,1998.
o. Marine dyes have several uses as dye on its own and as a part of compositions.
Several authors have disclosed fluorescent dye blends for multiple purposes (Burns, et al.
25 In US patent No. 5,920,429 published on July 6, 1999; Burs; David M and Pavelka Lee A, (International patent AU704112). The marine dye compositions have been used in a number of applications to mark the location of crashed aircraft, life rafts and military equipment for example rockets. The dyes commonly tried is fluorescein which is a water soluble synthetic dye. Different compositions of the dye for better efficiency and longer 30 duration of fluorescence in diluted form are under trials (Swinton; Robert J, US patent No.
5405,416 published on April 11, 1995 and International patent number W09010044 disclosed on 7 July 1990). Hyosu et al. (April 5, 1977 US patent 4,016,133) has prepared fluorescent colored resin particles.
Another use of marine dyes as undersea probes is reported by Crosby David A and Ekstrom Philip A, in US patent No. 5321268 published on 14 June 1994. The probe device includes a central optical fiber containing a fluorescent dye enclosed in a transparent or translucent, protective and fouling resistant sheath. This can be attached to marine animal for collecting data as to light intensity and temperature in regions where the marine animals travel.
Some authors have used UVA in photo-chemotherapy for skin cancers. Kowalzick L; Ott A; Waldmann T; Suckow M; Ponnighaus J, M. Vogtlandklinikum Plauen dislose PUVAbath photo-chemotherapy in lymphomatoid papulosis (a skin cancer) where UVA treatment has shown improvement (Elsevier Science B.V, 2000). UV A sunbeds are widely used by patients with psoriasis.
Sabatelli, Anthony D. (US patent No. 5,210,275 pub.date May 11, 1993) disclosed a chromatophore sunscreen composition for preventing sunburns. The chromatophore had the ability to absorb UVA and UVB wavelength radiations.
Fluorescent dyes are very useful in labeling of molecular probes for fluorescence microscopy. Fluorescence microscopy also known as Reflected light fluorescence or epifluorescence microscopy which is of great value for non-radioactive in situ hybridization, because of its high sensitivity and ability to excite three different immunofluorophore with spectrally separated emissions. It makes the multiple detections 20 possible (Chapter II. Nonradioactive In Situ Hybridization Application Manual.
S Boehringer Mannheim GmbH, Biochemica, printed in Germany, 1992). The principle behind is that when the specimen is irradiated by the excitation wavelength corresponding Sto Stoke's Law which explains that the wavelength of the fluorescent radiation is always longer than that of the excitation radiation ("Fluorescence" by George L. Clark, 1966 in 25 Encyclopaedia of chemistry, 2 nd ed. Page 435-436). Chapter V in: In Situ Hybridization Application Manual. Boehringer Mannheim GmbH, Biochemica, printed in Germany, 1992, Page 23-62 and Olympus Optical Co. Ltd, Tokyo Japan. Catalogue. "Instructions BX-FLA Reflected Light Fluorescence attachment" Page 16. 1999 described variety of non-radioactive fluorochrome stains in use these days.
30 Different stains are used for different excitation cubes of the fluorescent microscope. For example DAPI (DNA staining, emits blue color), Fluorescein dUTP; Hoechest 33258, 33342 are seen under excitation with 330-385 excitation cubes; FITC, Acridine Orange (for DNA, RNA emits greenish /yellowish hues), Auramine under 450-480 excitation cube and Rhodamine, TRITC and Propidium iodide (DNA, emits orange hues) under 510-550 excitation cube.
Rosenblum Barnett B and Spurgeon Sandra L; Lee Linda G; Benson Scott c; Graham Ronald J used a set of 4,7-dichlororhodamine compounds useful as fluorescent dyes as molecular probes in international patent number W00058406 published on 5 h October, 2000.
LaClair; James J. (US Patent No. 6,140,041 published on October 31, 2000 and WO9938919) disclosed synthesis of a fluorescent dye and its application in protein labeling, DNA labeling, single molecule spectroscopy and fluorescence.
The applicants have adopted a different approach; the dye reported in the present invention is a natural dye and not synthetic. It is from a marine animal and not from a plant or microbes. The partially pure dye is extracted from the cells of the skin of the invertebrate directly. This is a first report for a natural dye from a marine animal which is a fluorescent dye. The marine animal source for an embodiment of the present invention is a holothurian, sea cucumber called Holothuria scabra is a new source. Unlike most other fluorescent synthetic dyes known, the dye according to embodiments of the present invention does not need to be mixed with another dye for getting different fluorescence hues at different wavelengths. It emits three different colored fluorescence at three 20 different excitation wavelengths which can have multiple uses. Further even amongst the naturally known fluorescent dyes like the most popular green fluorescent protein (GFP) from a jelly fish, our dye is non proteinaceous in nature and is more stable at the room temperature for months and does not get contaminated by microbes. It has also qualities of o• a biosurfactant. Another important feature of the dye is that after excitation in the lower UV spectral ranges of wavelengths (UVB) it emits fluorescence in the UVA wavelength range. Both these absorption and emission ranges can be put to selective applications depending upon which UV spectra is preferable in a particular situation.
One important aspect of the dye of an embodiment of the present invention is its use in S compositions and kits for non radioactive labeling of molecular probes and 30 counterstaining. At different wavelength excitations it gives the effect equivalent to color of DAPI, FITC and PI. The dye is Three in One though it is a single dye. Actually, this single dye covers the colors of wavelength spectrum of 123 flurochromes presently known in the market (see Bitplane products (Fluorochrome) on the internet http://www.bitplane.ch/public/support/standard/Fluorochrome.htm.
1-NOV-2005(THU) 14:11 61 2 9453 3659 (FAX)bi Z 9453 JbI 9 uuq/U4j 3055-30.doc 6 Yet another aspect is its use as a fluorochrome stain in cpiflourescence microscopy which is reported here for the first time for any marine natural dye. This application provides a simple and quick method of checking cytogenetical prepfrations for multiple uses like molecular diagnostics using fluorescent in situ hybridization techniques, rapid diagnosis of biocontamination in tissue cultures, industrial preparations, water quality check in laboratory and wild conditions.
Yet another aspect of the dye is its use as a component of the nonradiactive labeling kits for advanced molecular biology applications.
SUMMARY OF THE INVENTION Accordingly, the invention provides a natural fluorescent dye obtained from an extract of a marine organism, said organism being a marine sea cucumber Holothuria scabra and said dye having the following characteristics: i. the fluorescent dye is not decolorized by a reducing agent, S. ii. the fluorescent dye is not a synthetic compound, 15 iii. the crude extract of the dye is yellowish green in color, iv. the purified dye is reddish brown colored powder when seen with the naked eye in the daylight, v. under tube light some hues of green are emitted by said dye, vi. the dye is amorphous in nature, 20 vii. the dye is soluble in water, viii. the dye is insoluble in organic solvents, ix. the dye is negatively charged, x. the dye has a pH of xi. the dye comprises a phenolic group, xii. the dye does not have a quinonoid ring, xiii. the dye does not have aromatic amine groups, xiv. the dye is non-proteinaceous in nature, xv. reducing sugar is absent from said dye, xvi. the dye can act as a biosurfactant, xvii. the dye has antimicrobial qualities and when antimicrobial assay is performed, shows zone of inhibition, xviii. pigment cum dye is a fluorescent dye and emits fluorescence when COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 10-NOV-2005(THU) 14:12 61 2 9453 3659 (FAXJb Z 94 5 Jib 9 r.uu-)/u) 3055-30.doc 7 excited with different wavelengths of UV and visible spectral ranges on a spectrophotometer, xix. UV, visible spectroscopy is from 300 nm-700 nm and the peaks are marked at 379 nm and 439 nm wavelengths for said dye, xx. UV, visible spectroscopy from 250 nm-350 nm and the peaks are at 272 nm and 299 nm wavelengths, xxi. fluorescent spectroscopy for said dye in the UV and visible spectra, when excited with UV 270 nm wavelength the fluorescence is emitted in the 324 nm-380 nm range, said range being within the UVA wavelength range of ultraviolet rays of sunlight, xxii. at an excitation wavelength 450 nm in Fluorescent spectroscopy for said dye the fluorescence emission is at 500 nm-580 nm with maximum intensity, xxiii. at an excitation wavelength 540 nm in Fluorescent spectroscopy for 15 said dye the fluorescence emission is at 500 nm-620 nm with S• maximum intensity, xxiv. with excitation wavelength 555 nm in Fluorescent spectroscopy for said dye the fluorescence emission is at 575 nm-620 nm with maximum intensity, 20 xxv. physical checking of Whatman Filter no. 1 dipped with dye concentration 1:40000 dilution under UV transilluminator and Gel Documentation system with IUV bulbs of 260 nm-280 nm range said dye emits a bluish green hue color of fluorescence, xxvi. the dye emits three different colored fluorescence at 3 different wavelengths of the UV and visible ranges of the fluorescent cubes of an epifluorescence microscope, xxvii. fluorescence blue color emission occurs in the 380 nm-400 nm range of UVA when excited under ultraviolet cube WU-330 nm-385 nm excitation range for said dye, xxviii. fluorescence yellow color emission occurs in the 500 nm-570 nm range when excited under WB cube of 450 nm-480 nm excitation COMS ID No: SBMI-01931614 Received by IP Australia: Time 14.24 Date 2005-11-10 L0-NOV-2005(THU) 14:12 61 2 9453 3659 (FAXJbi L 94J Jb)Y r. UUb/US4 3055-30.doc 8 range for said dye, xxix. fluorescence orange color emission occurs in the 570 nm-650 run range when excited under WG cube of 510 nm-550 nm excitation range for said dye, xxx. the dye emits hues of grays under the ordinary transmitted light bulb of the epifluorescence microscope when seen under 10 times objective, xxxi. the dye emits fluorescence colors at a dilution range of at least 1:40000, xxxii. the fluorescence of the extract persists after at least 1 year at room temperature, xxxiii. the fluorescence of the dye is photostable and is not deteriorated by long exposures to direct light, and xxxiv. the fluorescence of the dye does not change when frozen at minus .15 degree C.
Unless the context clearly requires otherwise, throughout the description and the claims the words 'comprise', 'comprising', and the like are to be construed in an inclusive sense as •opposed to an exclusive or exhaustive sense; that is to say, in the sense of "including, but not limited to".
20 The invention also provides a process for extraction, isolation and characterization of the said dye. Further, the invention provides compositions containing the said dye.
Accordingly, in one broad form the invention also provides a process for extraction of a natural fluorescent dye from Holothuria scabra sea cucumber, which comprises the steps of: collecting said Holothuria scabra, placing said Holothuria scabra in a seawater bath, freezing said Holothuria scabra at -20 degree C, thawing said Holothuria scabra to obtain a pigment; and repeating steps and for removal of said pigment.
DETAILED DESCRIPTION OF THE INVENTION After much research, the applicants have now identified a novel fluorescent dye obtained from marine animals, specially from invertebrates and more specifically from the sea- COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 18-NOV-2005(FRI) 12:02 61 2 9453 3659 (FAXJbl Z 9453 3659 F. UUZ/UU 3055-30.doc 9 cucumber Holothuria scabra.
Subkingdom: Metazoa Phylum: Echinodermata Sub-Phylum: Eleutherozoa Class: Holothuroidea Subclass: Aspidochirotacea Order Aspidochirota Amongst these orders sea cucumber Holothuria scabra belongs to: Order Aspidochirota Family: Holothuriidae Genus:Holothuria Species: scabra Embodiments of the present invention further provide a novel fluorescent dye which is obtained from the skin of the animal. It also describes the physical and chemical nature of the dye and its stability in direct light, high and low temperature. The said dye has three coo colored fluorescent emissions at three different excitation wavelengths of UV and visible light spectrum. An embodiment of the present invention also relates to screening of cells under fluorescence microscope for a rapid check of contamination and cytogenetical screening. An embodiment of the present invention is also concerned with the uses of the 20 dye as a non-radioactive label of protein, DNA and RNA molecular probes for advanced molecular diagnostics, epi-fluorescence microscopy for single and double staining of chromosomes, cells and tissues, fluorescence in situ hybridization applications, biosurfactant, biocontamination and leakage check, photo-chemotherapy, novel remote sensing devices, underwater probes, life saving devices, mark the location of crashed 25 aircraft, life rafts and military equipment for example rockets, various fluorescence applications in sub zero temperature conditions and many more.
Embodiments of the present invention describes fluorescent dye obtained from marine animals which either absorb sunlight for their physiological functions or are exposed to longer durations of sunlight and appear to have evolved mechanisms of fluorescence at different wave lengths. Like the phytoplankton, picoplankton and photosynthetic bacteria absorb sunlight for their photosynthetic functions, the required wavelengths of light spectra are used in the chemical pathways and extra light is emitted following Stoke's law.
The invertebrate animals who do not have an extra outer armor like a shell and conspicuous defence organs, who have hard and spiny skin, who have a strong endoskeleton formed of ossicles, are sedentary or slow mobility, have long hours of exposures to direct sunlight, COMS ID No: SBMI-01989138 Received by IP Australia: Time 12:02 Date 2005-11-18 18-NOV-2005(FRI) 12:03 61 2 9453 3659 (FAX)61 2 9453 3659 UUJ/UU) 3055-30.doc live in sand or crevices may show fluorescence.
Embodiments of the present invention seeks to overcome the drawbacks inherent in the prior art by providing highly efficient and selective methods for extraction, purification and characterization of a dye from a marine invertebrate and its multiple uses in making kits for molecular diagnostics using non-radioactive labels, molecular markers, epiflourescence microscopy, photochemotherapeutics, component of new instrumentation devices for land and underwater probes, cosmetic industry, food industries and armed forces etc.
The said marine invertebrate is an echinoderm taxonomically called Holothuria scabra belonging to the class Holothuroidea. The product of the invention is a novel dye which is reported for the first time. The animals were collected from the shores of central west coast of India during low tide, brought to the laboratory and maintained in glass tanks containing sea-water of salinity 30-32% per par. The animals were adults and sexually mature. The taxonomic position was identified as above said. In fact, most of the dyes available are synthetic in nature. There are only 6 types of natural dyes. This includes dyes obtained from 15 all living organisms. The fluorescent dye reported in the present invention is the only one of o its kind from marine organisms.
As used herein the term dye is used for a pigment which does not get decolorised by a reducing agent. The said dye imparts color to the fibre, cellulose etc. It is called a natural dye as the source is from a marine animal found commonly in the nature along shores of the 20 world and is not a synthetic pigment. A fluorescent dye is one which on excitation at a particular wavelength during the transition from a higher to the lower electronic state within a very short duration it emits light.
Multiple colored fluorescence means the emission of different colored light when excited at different ranges of wavelengths. It emits blue, yellow and orange colored hues of 25 fluorescence at excitations with different spectra of UV and visible light. Bio-surfactant means a dye solution which if shaken provides foam like soap and shows anti-microbial quality. The molecular diagnostics as used herein means the use of the dye as a nonradioactive label of molecular probes for fluorescent in situ hybridization applications in molecular cyto-genetics and as markers in microarrays, and molecular biological studies.
The epifluorescent microscopy here pertains to the microscopic studies of cyto-genetical preparations of slides by using the present dye as a stain and recording different colored fluorescence when observed under different cube configurations emits a particular colored emission on excitation with known fluorochromes. The fluoro-chrome cubes WUB, WB, WG are the designated filter cube configurations of the Olympus BX-FLA reflected light fluorescence attachment for different wavelengths.
COMS ID No: SBMI-01989138 Received by IP Australia: Time 12:02 Date 2005-11-18 18-NOV-2005(FRI) 12:03 61 2 9453 3659 (FAXJbl Z 94 J Jb)9 UU4/UU' 3055-30.doc 11 Accordingly, the invention also provides a method for extraction, purification and characterization ofa natural fluorescent dye which comprises of collection of the material from field and maintenance in the laboratory conditions, (ii) extraction of the pigment from the skin of the echinoderm sea cucumber Holothuria scabra, and (iii) partial purification of the dye.
The physical and other characteristics of the dye may be assessed by the following steps: Structural analysis of the dye, (ii) Biosurfactant analysis, (iii) Antimicrobial test, (iv) Visible spectroscopy of the dye, Fluorescence spectroscopy of the dye, i (vi) Physical checking of emission under a UV transilluminator 260-280 15 nm range, S(vii) Preparation of the cytogenetic slides by air dried method, (viii) Staining of slides with the dye, S(ix) Epifluorescent microscopic screening of the cytogenetic slides under fluorochrome cubes WU WB WG and Bright field, 20 Microphotography of emitted fluorescence in the areas of slides without any cytogenetic material, (xi) Microphotography of emitted fluorescence of the cytogenetic slides under fluorochrome cubes WU, WB, WG and Bright field, and S* (xii) Checking of wavelength ranges of the fluorescent hues of emission and wavelength ranges of the excitation ranges of fluorochrome cubes.
Thus the invention provides a natural fluorescent dye of marine animal origin which emits three different colored fluorescence in the hues of blue, yellow and orange when excited with three different ranges of wavelengths in the UV and visible light spectral cubes of an epifluorescence microscope. The invention further relates to the peaks of emission at the nearly same ranges of excitation wavelengths by recording readings of a fluorescence spectrophotometer and the visible light spectrophotometer respectively. The invention further relates to the epifluorescence microscopy of cytogenetic material on air dried preparations by using this dye as the cpifluorescent microscopic stain. This dye could be COMS ID No: SBMI-01989138 Received by IP Australia: Time 12:02 Date 2005-11-18 18-NQV-2005(FRi 1 12:03 61 2 9453 3659 (FAXJ6I 2 9453 3659 P. 3055-30.doc used in making non-radioactive labeling kits for molecular diagnostics by fluorescent in situ hybridization in various molecular, biomedical and engineering sciences.
In an embodiment the source of the dye is an invertebrate marine animal belonging to SubKingdom :Metazoa, Phylum Echinodermata; subphylum Eleuthcmozoa, Class Holothuroidea. Name: Holothui-ia scabra.
0 0000 0* S 0* 00 00
S..
0
S
S.
S
00. 0
*S
0 C S
S
0s.0 0 *.0S *0S0Sb 0 005560
OS
0 0 SBMI-01989138 Received by IP Australia: Time 12:02 Date 2005-11-18 W00O2079327 rhttftAAw neteaet~o/oi 1q$xmspor/ec/O0092-p~fo~ela rt=maintoolbar=bottoml aAI d6 P- e 13 of n WO 02/079327 PCTIINOI/00082 12 In yet another embodiment the Holothuria scabra is selected from the group comprising of sea cucumbers and widely distributed in the shores, shallow waters, deep waters all over the world particularly Indo-Pacific. The nearest well known relatives of sea cucumber are the sea urchins and star fishes.
In yet another embodiment skin of Holothuria scabra is separated and weighed. To 15 gins of skin by wet weight 250 ml of 50% alcohol is added and filtered under vacuum by using a peristaltic pump working at the rate of 200 rpm.
In yet another embodiment the extract is evaporated to one third of its volume keeping on a water bath at 80 degree centigrade iLe from 250 ml concentrated to 80 ml. It takes about 3 hours of duration for evaporation.
In yet another embodiment 100 ml ethanol 99.5% is added to 80 ml of the concentrate of the extract and allowed to precipitate overnight.
In yet another embodiment the concentrate with the precipitate is centrifuged at 1500 rpm for 4-5 minutes and the top layer is decanted. The precipitate is evaporated to the dryness on water bath at 80 degree Centigrade for 5 minutes 250 ml of 50% ethanol extract provide gins of dye on evaporation.
In yet another embodiment the partially pure dye is scooped out with the help of a spatula and stored in a dry glass vial at the room temperature.
In another aspect the physical nature of the dye is recorded. The pure dried dye is reddish brown in color in the day light. Under tube light a hue of green is observed. The dye is soluble in water. Insoluble in organic solvents like pure ethanol, methanol, chloroform and acetone. It is amorphous in nature. It has pH of 6.5 in aqueous solution.
In yet another aspect structural analysis was done by chemical method. The dye is dissolved in distilled water 2mg /ml and checked for chemical nature In yet another embodiment Neutral ferric chloride was added and purple coloration was observed. It proved that phenolic group is present.
In another embodiment P3- mercaptoethanol (Beta mercaptoethanol) reducing agent was added. No decoloration of the compound occurred. This proved that Quinonoid ring is absent and the pigment is a dye.
In another embodiment the diazotization was done by adding 0.1 N HCl and NaNO 2 Sodium nitrite) and alkaline solution of beta (J3) naphthol was added to. it. No precipitation was observed. This proved absence of the amine group.
In another embodiment the concentrated dye solution @10 mg /ml was heated and no precipitation or coagulation was observed. This proved that the compound is non W002079327 [http://www.getthepatent.com/Login.doq/$exam.support/FetchW002079327.cpc?fromCache=1part=maintoolbar=bottm] Page 14 of WO 02/079327 PCT/IN01/00082 13 proteinaceous in.nature. To the same solution add a drop of concentrated HCL and added Fehling's solution. No color change proved that the reducing sugar is absent.
In another embodiment the biosurfactant nature of the dye was observed by its making a foam while added to water and shaken.
In another embodiment the anti-microbial disc test was performed and the zone of inhibition was observed.
The applicants studied the nature of the dye and found that it gave multicolored emissions at different wavelengths of excitations which are comparable to the fluorochrome microscopic stains already in the market. The blue colored fluorescence of the present dye is comparable to the emission of same color by DAPI fluorochrome at the same wavelength excitation, used as components of the nonradioactive labeling kits of biochemistry, cell biology, immunochemistry, and molecular biology. The yellow colored fluorescence of the said dye in the visible range is comparable to the same colored emissions of auramine used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology. The yellow colored fluorescence of the said dye in the visible range is comparable to the same colored emissions of FITC used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology. The orange colored fluorescent emission is comparable to the orange fluorescence color of Propidium Iodide fluorochrome used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology. A dye as claimed in claim 1 wherein the orange colored fluorescent emission is comparable to the orange fluorescence color of TRITC fluorochrome used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology. The dye is stable at the room temperature and has a long shelf life. The molecular and radioactive kits of the said dye can be exported at the room temperatures. The dye has characteristics of atleast one hundred and twenty three different fluorochromes namely DAPI, Hoechest 33258, Hoechest 33342, FITC, acridine orange, auramine, Rhodamine, TRITC, and propidium iodide, which are now in the market. The dye, under ordinary light of microscope the hues of grays produce a phase contrast effect which is useful in rapid screening of cytogentical, cytological, and histochemical slides and save expenses on the extra phase contrast accessory component of microscope. The fluorescence color emissions follow Stoke's law of fluorescence. The microphotographs with Kodak film rolls shows hues of the adjacent color emission wavelengths such as blue color fluorescence under the W002079327 [http:/ww.getthepatent.com/Loin.doq$exam.upportFetchAN002079327.cpcfromCache=l part=maintoolbar-bottoml Page 15 of WO 02/079327 PCT/IN01/00082 14 epifluorescence microscope in microphotograph the hues of green. The microphotographs with Kodak film rolls shows hues of the adjacent color emission wavelengths like when seen yellow color fluorescence under the epifluorescence microscope in microphotograph the hues of green also comes. The orange fluorescence color under the epifluorescence microscope in microphotograph the hues of red also comes. The cytogenetic slides seen for fluorescence gives a counterstain effect of cells with the background where no specimen but only dye is present.
In another aspect UV visible spectroscopy from 300 nm -700nm wavelength (Fig. 3) was performed. The peaks are marked at 379 nm and 439nm wavelengths In another embodiment the UV spectroscopy from 250 nm -350 nm wavelength (Fig.4) was performed. The peaks are marked at 272 nm and 299 nm wavelengths In yet another aspect the fluorescence spectroscopy, with excitation wavelength 270nm.
The fluorescence occurred at 324 nm -380 nm with maximum intensity (Fig. In another embodiment the fluorescence spectroscopy, with excitation wavelength 450nm.
The fluorescence occurred at 500nm 580nm with maximum intensity (Fig. 6).
In another embodiment the fluorescence spectroscopy, with excitation wavelength 540nm.
The fluorescence occurred at 500 nm -620 nm with maximum intensity (Fig. 7).
In another embodiment the fluorescence spectroscopy, with excitation wavelength 555 nm.
The fluorescence occurred at 575 nm -620 nm with maximum intensity (Fig. 8).
In another embodiment a Whatman number 1 filter paper is soaked in the extract of the dye and observed under the UV transilluminator with UV bulbs of 260nm-280nm wavelength range. It emitted blue fluorescence.
In yet another aspect the epifluorescence microscopic studies are made by using this dye as a stain in the dilutions of 1:10000 (1 gm per 10 litre) and recording emissions of light when excited by different cubes and compared the color hues with the known fluorochromes.
Different stains are used for different excitation cubes of the fluorescent microscope. For example DAPI (DNA staining, emits blue color), Fluorescein dUTP; Hoechest 33258, 33342 are seen under excitation with 330 nm -385 nm excitation cubes; FITC, Acridine Orange (for DNA, RNA emits greenish /yellowish hues), Auramine under 450 nm 480 nm excitation cube and Rhodamine, TRITC and Propidium iodide (DNA, emits orange hues) under 510 nm -550 nm excitation cube.
In an embodiment to this epifluorescence microscopic screening of the cytogenetic slides is done by putting a drop of the diluted extract and excitation with the WU filter having spectral range of 330-385 nm wavelengths.
W002079327 Rhttp:/lwwwgetthepatent.COM/Login.dogI$exam support/FetcflW02079327.cdcfromCache l artmaintoolbar-bottomI Page 16 of 6 WO 02/079327 PCT/IN01/00082 In another embodiment epifluorescence microscopic screening of the cytogenetic slides is done by putting a drop of the extract and excitation with the WB filter having spectral range of 450 nm 480 nm wavelengths.
In another embodiment epifluorescence microscopic screening of the cytogenetic slides is done by putting a drop of the extract and excitation with the WG filter having spectral range of 510 nm 550 nm wavelengths.
In yet another embodiment epifluorescent microscopic screening of the cytogenetic slides under Bright Field objective using this dye by transmitted light.
In yet another embodiment epifluorescence microscopic screening of the cytogenetic slides stained with the dye is done by observing hues of the fluorescence color emitted by the respective excitations.
In another embodiment the excitation with the WU 330 nm -385 nm range emitted fluorescence is in the 380 nm 400 nm range.
In another embodiment the excitation with the WB filter having spectral range of 450 nm 480 nm emitted fluorescence in the 550 nm -570 nm range.
In yet another embodiment the excitation with the WG filter having spectral range of 510 nm -550 nm emitted fluorescence in the 600 nm -650 nm range.
In another embodiment epifluorescent microscopic screening of the cytogenetic slides under Bright Field by using transmitted light emitted light in full white range of the visible spectra depending upon the density of the cell ingredients and giving a phase contrast effect.
In yet another aspect of the invention microphotography of emitted fluoresce;,e in the areas of slides without cells under WU 330 nm -385 nm range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hues of blue fluorescence was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides without cells under WB 450 nm -480 nm range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hue of yellow fluorescence was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides without cells under WG 510 nm -550 nm range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hue of orange fluorescence was emitted.
V002079327 [http:/wwgetthepaten comDLogin~d/$exam~suppr/FetchNW 2079327.cpc7 rom(;ache=1part=maintoolbar=DOttom vage 1 iot b O WO 02/079327 PCT/IN01/00082 16 In another embodiment microphotography of emitted fluorescence in the areas of slides without cells under Bright field hues of grey was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides with cells under WU 330 run -385 runm range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hue of blue fluorescence was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides with cells under WB 450 rn -480 un range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hue of yellow fluorescence was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides with cells under WG 510 un -550 rn range is done by Kodak film of 400 ASA speed with an exposure varying from 50 seconds to 60 seconds. The hue of orange fluorescence was emitted.
In another embodiment microphotography of emitted fluorescence in the areas of slides with cells under Bright field hue of grey was emitted.
In yet another aspect of the invention the 1: 10000 times dilutions of the dye when prepared in distilled water and used as a stain the colored fluorescent emissions occurred in the UV and visible ranges of the epifluorescence microscope.
In still another embodiment, the dye is diluted with water in the ratio 1:40,000 times and this gives fluorescence of three colors at three different wavelengths.
In yet another embodiment the invention provides a bioactive composition containing an extract obtained from the marine sea-cucumber Holothuria scabra in the ratio of 1:40000 in ultrapure water to obtain fluorescence of three colors at three different wavelengths and a phase contrast effect under transmitted light.
The invention also provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful for the preparation of flexible polyvinyl chloride film that exhibits fluorescent colors.
In an embodiment, the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in the preparation of coating compositions and inks.
In another embodiment, the invention provides composition comprising a bioactive extract W002079327 [http://ww.getthepatent.com/Login.dog/$examsupport/FetchN002079327.cpc?fromCache=1Dart=maintoolbar=bottoml] Page 18 of E WO 02/079327 PCT/IN01/00082 17 obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in detection of leaks.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in undersea probes.
In still another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in photo chemotherapy of skin cancers.
In yet another embodiment the invention provides a cosmetic composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a fluorescent probe in situ hybridization kits for molecular diagnosis.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a component of non-radioactive labeling and detection kits of biochemistry, cell biology, immunochemistry and molecular biology.
In yet another embodiment the invention provides a composition comprising a bicactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in immuno fluorescent detections.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a counterstain of DIG-labeled oliogonucleotide probes and anti-DIG Fab-fragments.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in single and multiple cell quantitative fluorescence in flowcytometry.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as fluorochrome stains for epifluorescence microscopy.
In yet another embodiment the invention provides a composition comprising a bioactive M002079327 rhnr:/tww~lefheptenaco/Loineoq/examsuportFeth/W020932.cpo frml aheIpa rt=maintoolbar--boftomI Paoe 19 of Pane 19 of W002079327 Dart=maifltoolbarbottoml P~n~ lQnf6O WO 02/079327 PCT/IN01/00082 18 extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful for a quick check of biocontamination in the health food industry, cosmetic industry, pharmaceutical and chemical industries.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful for rapid estimations of biocontaminants in laboratory cultures.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful for a rapid check ofbiopollutants under field conditions.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a competitive inhibitor of cholinesterases.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful in antimicrobial compositions.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a biosurfactant in toiletry compositions.
In yet another embodiment the invention provides a composition comprising a bioactive extract obtained from the marine sea-cucumber Holothuria scabra together with conventional additives and useful as a natural colorant.
DESCRIPTION OF THE TABLES Table 1. Structural analysis of the dye by chemical method for presence or absence of Quinonoid ring, phenolic and amine group.
Table 2. Structural analysis of the dye by chemical method for checking absence of Quinonoid ring, proteinaceous/nonproteinaceous nature and presence absence of the reducing sugar.
Table 3. The color of the different colored fluorescence of the dye used as stain when excited with different wavelength cubes of the Olympus epifluorescence microscope.
DESCRIPTION OF THE ACCOMPANYING
DRAWINGS
Figure 1: Seacucumber Holothuria scabra fresh from the field before Extraction of the dye.
W002079327 fhttp://www.getthepatenc om/Loin.d/$exam.support/Fetch/W02079327.cpc?fromCache=1part=maintoolbar=bottom] Pae 0 of WO 02/079327 PCT/IN01/00082 19 Figure 2: Seacucumber Holothuria scabra after 4 h time extraction of the dye.
Figure 3: Scanning in UV visible regoin.
Figure 4: Scanning in the UV regoin.
Figure 5 Fluorescence spectrophotometry. Excitation wavelength 270 nm.
Figure 6: Fluorescence spectrophotometry. Excitation wavelength 450 nm.
Figure 7: Fluorescence spectrophotometry. Excitation wavelength 540 nm.
Figure 8: Fluorescence spectrophotometry. Excitation wavelength 270 nm.
Figure 9: Whatman filter paper 1 is cut round dipped at the tip in the dilute crude extract of the dye and seen under UV radiation in a Gel Doc. The arrow shows the fluorescence, photographed through a UV filter. The lower part is the control without the dye.
Figure 10: Whatman filter papers, used for filtration of the extract and seen under UV transilluminator 260 nm -280 nm wavelength range bulbs). The arrows show fluorescence. The lower filter paper is without any extract kept as control.
Figures 11-14:Epifluorescence microscopic blue fluorescent emissions with WU cube having excitation range of 330 nm -385 nm. Fig. 11 is fluorescence of dye without any specimens. Fig 12 is with cells seen under 10X objective. Fig.
13: the same seen under 40 X objective and Fig. 14 cells seen under 100 X oil immersion objective.
Figures 15-18:Epifluorescence microscopic greenish yellow fluorescent emissions with WB cube having excitation range of 450 nm -480 nm. Fig. 15 is fluorescence of dye without any specimens. Fig 16 is with cells seen under objective. Fig. 17 18 the same as seen under 100 X oil immersion objective.
Figures 19-22:Epifluorescence microscopic hues of orange fluorescent emissions with WG cube having excitation range of 510 nm -550 nm. Fig. 19 is fluorescence of dye without any specimens. Fig 20 is fluorescence with cells seen under 10X objective. Fig. 21: the same seen under 40 X objective and Fig. 22. cells seen under 100 X oil immersion objective.
Figure 23: Cells as seen through bright field under 10X objective. The hues of grey -a phase contrast effect was seen.
Figure 24: The same cells as seen through bright field under 100X oil immersion objective.
l~tfwilrt-Tf'^'^- rfc AjttU*A«*.A«_. ~llnnnrtlFp(rhlW~n3n7a137 mP3fmmr.Rr.hB=1O~T1=maintMlhar=hnttnml Pane 21 of -et Minnin~lV707 OnfromCarhe 1 nmaintlmaintoohbar--fttml Pane 21 of WO 02/079327 PCT/IN01/00082 This invention pertains to the process of extraction, purification and characterization of a new pigment which is a natural dye from an echinoderm (Holothuroidea: Holothuria scabra) widely distributed along the central west coast of India and the Indo-pacific regions of the world.
The invention further provides a novel fluorescent pure dye from the skin pigment of the animal which can be repeatedly extracted 3-4 times from the same specimen by storing under -20 degree Centigrade, thus saving over exploitation of natural resources The present invention also contemplates that the said dye has three colored flt'orescent emissions at three different excitation wavelengths of UV and visible light spectra equivalent to emissions by three different fluorochromes (DAPI, FITC and PI) currently sold in the market for fluorescent microscopy.
Thus the dye can be commercialized as three in one flurochrome dye of epifluorescence microscopy for single and double staining of chromosomes, cells and tissues following simple protocols.
The present invention also contemplates the use of the dye in non-radioactive labeling of protein, DNA and RNA probes for fluorescent in situ hybridization applications in molecular biology.
Thus in a preferred mode of use the dye can be a component of molecular labeling and detection kits, most of which are imported and sold at high rates.
These labeling kits are widely sought after for molecular diagnostics using rapid molecular cytogenetic and microarrays techniques.
In yet another preferred mode of utility, dye can be advantageous in making compositions of cosmetics for absorption of UVB from the sunlight Yet another advantage of the dye is that its fluorescence is visible even in very dilute solutions (1:40000).
This property can be utilized in life saving devices as a component of life jackets and to mark the location of crashed aircraft, life rafts and military equipment for example rockets, leaking checks in the industries.
The invention would be useful for quantitative measure of fluorescence in flowcytometer for single and multiple cells.
The invention would be also advantageous in quick estimations of biocontaminations in natural and controlled environments like tissue cultures, pollution, industrial contaminations in health, food and cosmetic industries.
W002079327 [http://www.etthepatent.com/Login.do/Sexam support/Fetch/WOO2079327.cpc?fromCache=1part=maintoolbar=bottom] Page 22 off WO 02/079327 PCT/IN01/00082 21 The ability of the dye to emit fluorescence in the UVA range when excited with lower wavelengths of UV irradiation is useful for selective photo chemotherapy of skin cancers.
In another preferred mode the dye can be of use as a component of sunscreen compositions in cosmetic industry.
Yet another utility is that the dye is a biosurfactant and can be used in antimicrobial toiletry and compositions.
In another preferred mode of use the dye has a long shelf life at the room temperature as checked by fluorescent spectrophotometric analysis.
In a yet another preferred mode of use the fluorochromes present will give natural color to the cosmetics and save expenses on color additives.
Another utility of the fluorescent dye is as a component of novel remote sensing devices and undersea probes where a light wavelength sensitivity based data is required.
The invention is illustrated by the following examples which should not be construed as limitations on the inventive scope of the invention in any manner: Examples The methods of extraction, partial purification, characterization of the dye and the details of the experiments performed to check fluorescent effects of the dye by spectroscopic analysis and epifluorscence microscopy are disclosed: Example 1 Collection of the material.
Subkingdom: Metazoa Phylum: Echinodermata Sub-Phylum: Eleutherozoa Class: Holothuroidea Subclass: Dendrochirotacea Order: Dendrochirotida Genus: Holothuria Species: scabra The animals belonging to the were collected from the shores of central west coast of India during a low tide. These were brought to the laboratory and maintained in glass tanks containing seawater of salinity 30 -32 per par till taxonomic identification and further use. The animals were adult and sexually mature.
W002079327 [http:/www.getthepatent.com/Lo.in.do/$exam.support/Fetch/W02079327.cpc?fromCache=1 part=maintoolbar=bottom] Page 23 of WO 02/079327 PCT/IN01/00082 22 Example 2 Extraction of the pigment Two methods were tried.
1) In our initial experiments the animal after collection were frozen at -20 degree Centigrade and when thawed partial pigment came out in the tray. Which was processed and this way from one animal 3-4 times pigment could be removed. Figs.
1& 2 show the fresh and 4 times used animal for extractions.
2) In the second method the animals were first washed with tap water and then with Milliq water ultrapure water). The body was cut open with the sharp scissors and body wall was separated from the other viscera. From body wall the with the help of sharp razors epidermal skin portion was peeled off and stored in -20 degree Centigrade refrigerator if not processing further immediately. it was then placed in a beaker and vol ethanol alcohol and MQ water mixture was added to it in the following ratios.
15gm animal skin 250 ml of 50% ethanol alcohol.
Example 3 Filtration of the pigment solution This step was performed to remove the debris of cells and some of the suspended and precipitated impurities. Centrifuge it down so as to make a clear solution and precipitate down all suspended things.
The colored solution was decanted and filtered with a microfiltration unit (Vensil make) glass filter with the help of a peristaltic pump. The filtrate was placed on an orbital shaker and left for half an hour at a rotation of 200rpm.
Example 4 Concentration of the pigment The colored solution was then placed on a water bath at 80 degree Centigrade and concentrated to one third of it's volume. This also evaporated the alcohol present. The concentrate was again subjected to filtration with the same filtering apparatus.
Example Purification of the dye The solution of pigment will contain impurities like NaCl, MgCl 2 MgSO 4 and other water soluble compounds. It was seen that polar organic solvents like alcohol (dehydrated), acetone if added to the concentrated solution of pigment it will rapidly be precipitated.
W002079327 Ihttp:/twww.gethepatt.com/Login.doaqSexam.suportFetriWO02079327.cDcfromCache= 1 oart=maintoolbarbottom2 Pac le 24 of 6 Pa- WO 02/079327 PCT/IN01/00082 23 Then it can be separated from the seawater salts. This is to purify the pigment for spectroscopic analysis.
The concentrated solution prepared by example 5 described above was taken in a separating funnel of 500 ml and to this was added ethanol (80 ml of concentrated supernatant 100 ml of 99.5% ethanol). Tilted the separating funnel to gently mix the contents and collected the precipitate overnight. The concentrate with the precipitate is centrifuged at 1500 rpm for 4-5 minutes and the top layer is decanted. The precipitate was again dissolved in 5 ml of MQ water and again 100 ethanol was added until the precipitation is complete. This was again centrifuged and the precipitate was collected.This step is repeated 3-4 times to purify the pigment.
The precipitate is evaporated to the dryness on water bath at 80 degree Centigrade for minutes. The pure dye is scooped out with the help of a spatula and stored in a dry glass vial at the room temperature.
250 ml of 50% ethanol crude extract from example 2 provided 2.5 gms of partially purified dye on evaporation in a powder form.
Example 6 Physical characteristic of the compound The crude extract is yellowish green in color. The physical nature of the pure dried dye when recorded with the naked eye is reddish brown in color in the day light. Under tube light a hue of green is observed. The dye is soluble in water and insoluble in organic solvents like pure ethanol, methanol and acetone. It is amorphous in nature. It has pH of and has a negative charge.
Example 7 Structural analysis of the dye by chemical methods Experiment 1: CHNS elemental analysis of the dye was performed and results are given in Table 1 and Experiment 2: The dye is dissolved in MQ water 2mg /ml and checked for chemical nature The presence and absence of certain groups was tested and results are given in Table 2.
whenever a test showed negativity, the higher concentration of dye was used and experiment performed again.
For example to 2mg /ml solution of dye Beta- mercaptoethanol reducing agent) was added. No decoloration of the compound occurred. This proved that Quinonoid ring is absent and the pigment is a dye.
V002079327 [htp:/Aatbaoef thepatent.COMml gin.doga Page 25 at bU WO 02/079327 PCT/IN01/00082 24 In experiment 3, the concentrated dye solution 10 mg /ml was heated and no precipitation or coagulation was observed. This proved that the compound is non proteinaceous in nature.
In experiment 4 to the same solution added a drop of concentrated HC1 and added Fehling's solution. No color change proved that the reducing sugar is absent.
Example 8 Checking electric charge of the Dye: The charge of the compound which was done by gel electrophoresis.
Dye samples (10ml) are loaded in 1% agarose gel prepared with 0.5 X TBE. The gel was allowed to run for an hour at 65 volts. It was removed from the gel casting system and observed by eye as well as under a UV transilluminator. It was found that the dye was moving towards positively charged electrode, so the dye itself is a negatively charged compound Hence it was getting attracted towards positively charged electrode.
Example 9 Biosurfactant analysis: The biosurfactant nature of the dye was observed by its making a foam while added to water and shaken. The solution gave feeling of soapiness.
Example Antimicrobial test: As the marine dye is a phenolic compound and phenolic compounds are generally having antimicrobial activity antimicrobial assay was performed with this compound and the zone of inhibition was observed.
E.coli (wild type) culture was grown overnight in MacConkey's broth 50ml in a conical flask (100 ml) Antibiotic assay agar medium was prepared and sterilized. It was then brought to a temperature of 50 degree centigrade and Iml of E.coli (wild type)culture was added to it. The culture was mixed with antibiotic assay agar medium and was allowed to solidify. 10mg/ml of the sample was prepared and soaked in filter paper disks. It was then placed upon the said antibiotic assay agar medium seeded with E.coli.
It was then incubated at 37degree centigrade in an incubator for 24 hours. Zone of inhibition surrounding the filter disk was observed. This proved that the said dye was having antimicrobial activity against Gram Negative organisms like E.coli.
V002079327 [http:/www.gethepatent.com/Loin.doa/Sexm sunnort/FetchN02079327..cpCfromCach= 1 nrt=maintoolbar=bttom2 WO 02/079327 PCT/IN01/00082 Example 11 UVNisible spectroscopy of the dye Instrument used: Genesys2 UV spectrophotometer.
2mg 10 ml solution was prepared in volumetric flask and spec readings was taken in UV visible range by using a quartz cuvette and adding 2ml of the solution. The control was ultra pure water.
UV, visible spectroscopy from 300nm -700nm wavelength Fig. 3 4) was performed.
The peaks are marked at 379 nm and 439nm wavelengths.
The UV visible spectroscopy from 250 nm -350 nm wavelength Fig. 3 4) was performed. The peaks are marked at 272 nm and 299 nm wavelengths.
Example 12 Fluorescence spectroscopy of the dye Apparatus used: Hitachi Fluorescence spectrophotometer.
The fluorescence spectroscopy was performed at different wavelength ranges of the visible and UV spectra and emission ranges noted. It was found that with excitation wavelength of270nm. The fluorescence occurred at 324-380 with maximum intensity Fig. In the fluorescence spectroscopy, with excitation wavelength 450nm the fluorescence occurred at 500 580 with maximum intensity (Fig. 6).
In the fluorescence spectroscopy, with excitation wavelength 540nm the fluorescence occurred at 500-620 nm with maximum intensity (Fig. 7) and the fluorescence spectroscopy with excitation wavelength 555 nm the fluorescence occurred at 575-620 nm with maximum intensity (Fig. 8).
Example 13 Physical checking of emission under a UV transilluminator and Gel Documentation system A Whatman no. 1 filter paper was cut and dipped in diluted crude extract and seen under a gel doc UV light. It was clearly seen that as the dye progressed seeping in the fluorescence area progressed further Fig. 9).
In another test the filter papers used for filtration were seen under the UV transilluminator with 260-280 nm UV range bulbs The bluish green hued fluorescence was noticed. Example 14 Epifluorescence microscopy The epifluorescence microscopic studies are made by using this dye as a stain in the Page 26 of f IC^ I rnr-nmmr .amp= Inln=mllnrnnlrur=nnnoml r'aoe z f o oU 'L r-nm .Trom cne=1narT=mai no r-nnonhI 1 Id[]U Z f OT flU W002079327 [ht:rw~eteaetcmLgnogi,!xMS1pii-L~v~vvz -P' WO 02/079327 PCT/IN01/00082 26 dilutions of 1:40000 and recording emissions of light when excited by different cubes and compared the color hues with the known fluorochromes. The cytogenetical air dried preparations of a fixed tissue was made. To this was added a drop of the stain and placed a coverslip. The screening was done using excitations of UV light and visible light spectra by WU,WB and WG cubes of the Olympus reflected light.
WU cube's wavelength range was 330 nm 385 nm.
WB cube's wavelength range was 450nm 480 nm WG cube's wavelength range was 510nrm 550 nm.
Example The emission ranges at different excitation ranges were found out. It was seen that: Excitation with the WU 330 nm -385 nm range emitted fluorescence in the 380nm 400 nm range. Excitation with the WB filter having spectral range of 450 nm 480 nm emitted fluorescence in the 500 nm -570 nm range. The excitation with the WG filter having spectral range of 510 nr -550 nm emitted fluorescence in the 570 nm -650 nm range.
The epifluorescent microscopic screening of the cytogenetic slides under Bright Field by using transmitted light emitted light in full white range of the visible spectra and depending upon the density of the cell ingredients gave hues of gray a phase contrast like effect.
Example 16 Fluorescent color emitted The hues of colors emitted were noted in the areas where only dye was present and at places where some specimens were present The excitation spectral range and the emitted fluorescence strictly followed the Stoke's law (Table 3).
Example 17 Microphotography of the slides with the dye used as epi fluorescence microscopy stain The microphotography of emitted fluorescence in the areas of slides without cells and with specimen cells, under WU 330 nm -385 nm range, WB 450 nm -480 nm range, WG 510 nm -550 nm range and Bright field was done by Kodak film of 400 ASA speed with an exposure varying from 50 to 60 seconds.
The results are shown in Figs 11-24.
Example 18 Stability Check The said dye is stable and remains active at room temperature and it remains like that upto W002079327 [http://www.getthepatent.com/Login.dog/$exam.support/Fetch/WO2079327.cpc?fromCache=1part=maintoolbar=bottoml Page 28 of 6 WO 02/079327 PCT/IN01/00082 27 120 degree Centigrade and it was proved by no alteration of the spectral property after such treatment. The compound retained it's stability for about a year wiuiout any contamination or chemical decay. The said marine dye did not undergo photolysis after light treatment. So the said marine dye does not require stabilizing agents.
Example 19 Pesticidal effect The compound was toxic to insects. It showed toxicity to the insects like ants. The filter paper soaked in the dye was left unattended on the work bench. Next day it was noticed full of dead ants.
Example The dye was tested upon cell lines and activity seen.
Example 21 Staining with the Dye The fixed tissue with glacial acetic acid and methanol from different sources were taken on the slide and the dye solution was added to it without pretreatment It was observed different part of the cell was taking dye solution differently. The nucleus got stained because of the staining of arginine and lusine rich proteins present in the nucleus (Ex histone). The other cell organellae also got stained. As the followed marine dye is staining the proteins of chromosome it has added value in studying karyotype of the cell.
Example 22 The bioactive extract of the dye was taken in a microfuge tube and kept at -20 degree centigrade and seen in the frozen state under UV light. In another experiment the later dipped in the dye solution was held at -20 0 C and observed under UV transilluminator.
Example 23: The extract was used as vetenary remedy for killing ticks/fleas of dogs. 1:200 times dilutions of the crude extract killed ticks and fleas in less than 40 seconds.
Table 1 (a) Structural analysis of the dye by chemical method for presence absence of Quinonoid ring, phenolic and amine group.
W002079327 [http/www.getthepatent.comLogin.og/exam.support/Fet u' iomLacne= 1 pani=ia uuiui r a4 uuu WO 02/079327 PCT/IN01/00082 2 mg ml of water sample Purple coloration Phenolic ring is present neutral FeCI 3 2 mg ml of water sample No precipitate formed No aromatic amine group 0.1 N HCl Na NO 2 in cold present added to alkaline solution of Beta-naphthol Diazotization and then Beta- naphthol addition NOTE: The tests which gave negative results were repeated by taking solution of higher concentration.
Table 1 (b) Elemental Analysis of the fluorescent dye: 1. Carbon, 8.3629 2. Hydrogen, 1.7430 3. Nitrogen, 0.8368 4. Sulfur, 9.4521 Table 2 Structural analysis of the dye by chemical method for checking its proteinaceous non proteinaceous nature and presence absence of the reducing sugar.
Experiment Observation Inference Heat a conc. Solution 5-10 No precipitation or Nonproteinaceous mg /ml) coagulation compound 2 mg ml of water sample No color change Quinonoid ring is absent beta marcaptoethanol NOTE: The tests which gave negative results were repeated by taking solution of higher concentration.
Table 3 The color of the different colored fluorescence of the dye used as stain when excited with different wavelength cubes of the Olympus epifluorescence microscope.
Name of the Excitation range of Emission range of *Color of the fluorescent cube as the cube Fluorescence fluorescence given in the catalogue WU 330-385 nm 380- 400 nn Blue W0~02079327 (http:/Mww.getthepatet.comiLLagin-doq/$exam supportFetciO2737CCtmahe Datmitola-otm PaI3 f6 29 WB 450-480 rim 550-570 rim Yellow WG 510-550 rim 600-650 mi Orange Bright field Transmitted light Visible range Grey *NOTE: The microphotographs of these colors gave hues of the adjacent spectrum. For example, blue came as greenish hue, yellow camne as greenish yellow, Orange came as reddish orange. Whereas while observing the colors were clear blue, yellow and orange fluorescence.
ADVANTAGES OVER THE PRESENT MARKETED DYES 1. The dye is nonradiactive as i t is a dye from a natural source and not synthetic.
2. This dye in its single form is equivalent to three different synthetic fluorochromes giving same emission of fluorescent colors.
3. The dye can be used as a quick microscopic stain giving a phase contrast effect without any extra expenses on phase contrast accessory of a microscope and without any lengthy protocols of fixations and preservations of specimens. Especially on the spot quality check of live samples.
4. Being non degradable in quality of fluorescence for longer durations, it does not require refrigeration while exporting. The presently marketed fluorescent dyes exported under refrigeration equivalent to -20 degree centigrade Unlike the earlier known Green Fluorescent protein GFP) from a marine jelly fish, our dye is not a reporter gene The results are direct.GFP absorbs blue light at 395 run and with a minor peak at 470 run emits green light. Our dye emits 3 fluorescent colors and at three different fluorescent wavelengths. The dye is soluble in water -so can be used in components where water soluble dyes are needed. The dye is insoluble in the organic solvents like ethanol, methanol and acetone.
6. The dye is negatively charged 7. The dye has a pH of 6.5 which is almost neutral and hence willnot effect final properties of pH drastically in compositions.
8. The dye is non-proteinaceous in nature so non degradable under natural conditions.
9. The dye has nature of a biosurfactant so can be used in soaps and toiletry compositions.
10. The dye has antimicrobial qualities W002079327 rhtn:/twwwnefthenatentcom/L floinndoO/$exam.poV StA(02732.pDtoDaceiarTantobrF~tM wage ii or ou M -fl-O7Q327 I-rtto/M--,- f -nt c-m-ando/easoorIerhWO2737CCtrm~~l~ Dat-antoba-oto I rape 31 0? WO 02/079327 PCT/IN01/00082 11. The dye emitted these fluorescence colors even at a dilution range of 1:40000 times i.e. Igm powder of dye dissolved in 40 liters of ultrapure water).The fluorescence of the extract persisted even after atleast lyear at the room temperature .These multicolored emissions of the dye at different wavelengths of excitations are comparable to the fluorochrome microscopic stains already in the market.
12. The blue colored fluorescence of the present dye is comparable to the emission of same color by DAPI fluorochrome at the same wavelength excitation, used as components of the nonradioactive labeling kits of biochemistry, cell biology, immunochemistry, and molecular biology.
13. The blue colored fluorescence of the present dye is also comparable to the emission of color by Hoechest 33258 used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
14. The blue colored fluorescence of the present dye is also comparable to the emission of color by Hoechest 33342 fluorochrome at the same wavelength excitation used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
The yellow colored fluorescence of the said dye in the visible range is comparable to the same colored emissions of Acridine orange used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
16. The yellow colored fluorescence of the said dye in the visible range is comparable to the same colored emissions of auramine used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
17. The yellow colored fluorescence of the said dye in the visible range is comparable to the same colored emissions of FITC used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
18. The orange colored fluorescent emission is comparable to the orange fluorescence color of Propidium Iodide fluorochrome used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
19. The orange colored fluorescent emission is comparable to the orange fluorescence color of Rhodamine fluorochrome used as components of the nonradioactive labeling VVU0079327 [http:ll ww.getthepatent-com/LogindoI$examsupportFetcWOO2079327.cocfromacah 1 nart=maintoolbar-bottom] Page 32 of 6 WO 02/079327 PCT/IN01/00082 31 and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
The orange colored fluorescent emission is comparable to the orange fluorescence color of TRITC fluorochrome used as components of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology.
21. Unlike the synthetic commercial dyes used for the same purposes, the present dye is stable at the room temperature and has a long shelf life. Molecular nonradioactive kits of the said dye can be exported at the room temperatures.
22. The said single dye has characteristics of atleast one hundred and twenty three different fluorochromes (DAPI, Hoechest 33258, Hoechest 33342, FITC, acridine orange, auramine, Rhodamine, TRITC, and propidium iodide etc.) now in the market. Under ordinary light of microscope the.hues of grays produce a phase contrast effect which is useful in rapid screening of cytogentical, cytological, and histochemical slides and save expenses on the extra phase contrast accessory component of microscope. The fluorescence color emissions follow Stoke's law of fluorescence.
23. The microphotographs with Kodak film rolls shows hues of the adjacent color emission wavelengths. Like when seen blue color fluorescence under the epifluorescence microscope in microphotograph the hues of green also comes.
24. The microphotographs with Kodak film rolls shows hues of the adjacent color emission wavelengths. Like when seen yellow color fluorescence under the epiflukrescence microscope in microphotograph the hues of green also comes. The dye when seen orange fluorescence color under the epifluorescence microscope in microphotograph the hues of red also comes.
The cytogenetic slides seen under all fluorescence gives a counterstain effect of cells with the background where no specimen but only dye is present.
26. The dye can be used for the preparation of polyvinyl chloride film that exhibits fluorescent colors. It also can be used in fluorescent colors in variety of paints, inks, textiles.
27. The dye can be used in compositions of fluorescent dye for bleaching and brightening polymer. The dye can be used in leak detection with a full spectrum fluorescent dye. It can also be used in automated chemical metering system. It can also be used to mark the location of crashed aircrafts, life crafts, and equipment for example rockets. Further it can be used in under sea probes. The dye can be used in photo chemotherapy of skin cancers.
W002079327 fhttp:/Iwww.gethepatent.com/Lgin.doQg$exam.support/FetchMw002079327.cpc?fromCache= part=maintoolbar=ottom Page 33 of WO 02/079327 PCT/IN01/00082 32 28. The dye can be used as chromatophore sunscreen component of cosmetics creams and lotions.
29. The water miscible quality of the dye can make it easily miscible in moisturizers. It can be used as fluorescent in situ hybridization application kit component for molecular diagnostics. It can also be used as a component of the nonradioactive labeling and detection kits of biochemistry, cell biology, immunochemistry, and molecular biology for labeling of DNA,RNA, Proteins and enzymes., Immunofluorescent detections, Counterstain of DIG-labeled oliogonucleotide probes and Anti-DIG Fab-fragments, Single and multiple cell quantitative fluorescence in Flowcytometry., Fluorochrome stains for epifluorescence microscopy.
The dye can be used for a quick check of biocontamination in the health food industry, cosmetic industry, pharmaceutical and chemical industries, for rapid estimations of biocontaminants in laboratory cultures, for a rapid check of biopollutants under field conditions. It can also be a competitive inhibitor of cholinesterases.
31. The dye can be used in antimicrobial compositions.
32. The dye can be used as a biosurfactant in toiletry compositions.
33. The dye can be used natural colorant A bioactive composition of the marine dye in the ratio of 1:40000 in ultrapure water to obtain fluorescence of three colors at three different wavelengths and a phase contrast effect under transmitted light.
34. Purification of the dye can be done in 250 ml of 50% ethanol crude extract when evaporated on a waterbath at 80 degree centigrade for 5 minutes to purify provide gms of purified dye in a powder form. 2mg 10 ml solution composition is used for spectrophotometry Structural analysis of the dye using chemical method using concentration oflO mg /ml was used. A bioactive composition of the dye in the ratio of 1:40,000 times dilutions with water as the binder gives fluorescence of three colors at three different wavelengths.

Claims (2)

10-NOV-2005(THU) 14:12 61 2 9453 3b6 9 I(AAJol 9 3 l uul uJ1
3055-30.doc 33 The claims defining the invention are as follows: 1. A natural fluorescent dye obtained from an extract of a marine organism, said organism being a marine sea cucumber Holothuria scabra and said dye having the following characteristics: i. the fluorescent dye is not decolorized by a reducing agent, ii. the fluorescent dye is not a synthetic compound, iii. the crude extract of the dye is yellowish green in color, iv. the purified dye is reddish brown colored powder when seen with the naked eye in the daylight, v. under tube light some hues of green are emitted by said dye, vi. the dye is amorphous in nature, vii. the dye is soluble in water, viii. the dye is insoluble in organic solvents, ix. the dye is negatively charged, x. the dye has a pH of xi. the dye comprises a phenolic group, xii. the dye does not have a quinonoid ring, xiii. the dye does not have aromatic amine groups, Sxiv. the dye is non-proteinaceous in nature, 20 xv. reducing sugar is absent from said dye, xvi. the dye can act as a biosurfactant, xvii. the dye has antimicrobial qualities and when antimicrobial assay is performed, shows zone of inhibition, xviii. pigment cum dye is a fluorescent dye and emits fluorescence when excited with different wavelengths of UV and visible spectral ranges on a spectrophotometer, xix. UV, visible spectroscopy is from 300 nm-700 nm and the peaks are marked at 379 nm and 439 nm wavelengths for said dye, xx. UV, visible spectroscopy from 250 nm-350 nm and the peaks are at 272 nm and 299 nm wavelengths, COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 10-NOV-2005(TIU) 14:13 61 2 9453 3659 (FAXJbl Z 9q43 3~)v r. uu /u~4 3055-30.doc 34 xxi. fluorescent spectroscopy for said dye in the UV and visible spectra, when excited with UV 270 nm wavelength the fluorescence is emitted in the 324 nm-380 nm range, said range being within the UVA wavelength range of ultraviolet rays of sunlight, xxii. at an excitation wavelength 450 nm in Fluorescent spectroscopy for said dye the fluorescence emission is at 500 nm-580 nm with maximum intensity, xxiii. at an excitation wavelength 540 nm in Fluorescent spectroscopy for said dye the fluorescence emission is at 500 nm-620 nm with maximum intensity, xxiv. with excitation wavelength 555 nm in Fluorescent spectroscopy for said dye the fluorescence emission is at 575 nm-620 nm with maximum intensity, xxv. physical checking of Whatman Filter no. 1 dipped with dye e 15 concentration 1:40000 dilution under UV transilluminator and Gel Documentation system with UV bulbs of 260 nm-280 nm range said dye emits a bluish green hue color of fluorescence, xxvi. the dye emits three different colored fluorescence at 3 different wavelengths of-the UV and visible ranges of the fluorescent cubes of 20 an epifluorescence microscope, xxvii. fluorescence blue color emission occurs in the 380 nm-400 nm range of UVA when excited under ultraviolet cube WU-330 nm-385 nm excitation range for said dye, xxviii. fluorescence yellow color emission occurs in the 500 nm-570 nm range when excited under WB cube of 450 nm-480 nm excitation range for said dye, xxix. fluorescence orange color emission occurs in the 570 nm-650 nm range when excited under WG cube of 510 nm-550 nm excitation range for said dye, xxx. the dye emits hues of grays under the ordinary transmitted light bulb COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 10-NOV-2005(THU) 14:13 61 2 9453 3659 tVAX)bl Z 94Y Jb)9 r. uuY/u3q 3055-30.doc of the epifluorescence microscope when seen under 10 times objective, xxxi. the dye emits fluorescence colors at a dilution range of at least 1:40000, xxxii. the fluorescence of the extract persists after at least 1 year at room temperature, xxxiii. the fluorescence of the dye is photostable and is not deteriorated by long exposures to direct light, and xxxiv. the fluorescence of the dye does not change when frozen at minus degree C. 2. A dye as claimed in claim 1 wherein the multicolored emissions of the dye at different wavelengths of excitations are comparable to fluorochrome microscopic stains already on the market. 3. A dye as claimed in claim 1 wherein the blue colored fluorescent emission 15 of the dye is comparable to the emission of same color by DAPI fluorochrome at the same wavelength excitation. 4. A dye as claimed in claim 1 wherein the yellow colored fluorescent emission of the said dye in the visible range is comparable to the same colored emission of Auramin. 20 5. A dye as claimed in claim I wherein the yellow colored fluorescent emission of the said dye in the visible range is comparable to the same colored emissions of FITC. 6. A dye as claimed in claim 1 wherein the orange colored fluorescent emission is comparable to the orange fluorescence color of Propidium Iodide fluorochrome. 7. A dye as claimed in claim 1 wherein the orange colored fluorescent emission is comparable to the orange fluorescence color of Rhodamine fluorochrome. 8. A dye as claimed in claim I wherein the orange colored fluorescent emission is comparable to the orange fluorescence color of TRITC fluorochrome. 9. A dye as claimed in claim 1 wherein the dye is stable at the room temperature and has a long shelf life. COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 I-NO-2005(THU) 14:13 bl 2 945J Jb9Y AAJbl Z 9 q D)V r. UIUIU q 3055-30.doc 36 A dye as claimed in claim 1 wherein said dye is stable when transported at room temperature. 11. A dye as claimed in claim 1 wherein the dye is a single dye and has characteristics of at least one hundred different fluorochromes. 12. A dye as claimed in claim 11, wherein said at least one hundred different fluorochromes comprises at least one fluorochrome selected from the group consisting of DAPI, Hoechest 33258, Hocchest 33342, FITC, acridine orange, auramine, Rhodamine, TRITC, and propidium iodide. 13. A dye as claimed in claim 1 wherein said dye does not undergo loss in fluorescence upon freezing. 14. A dye as claimed in claim 1 wherein said dye when seen under bright field of fluorescent microscope, under 10 times objective exhibits hues of bluish grays so as to produce a phase contrast effect useful in economic rapid screening of cytogentical, cytological, and histochemical slides. 15 15. A dye as claimed in claim 1 wherein under 100 times oil immersion objective of an ordinary transmitted light microscope the proteins of yolk, nucleoplasm and chromatin of actively dividing cleavage cells show different colors of staining; said colors of staining comprising hues of brownish yellow for said proteins of yolk, yellow for said nucleoplasm and dark blue for said chromatin. 20 16. A dye as claimed in claim I wherein the fluorescence color emissions follow Stoke's law of fluorescence. S17. A dye as claimed in claim 1 wherein microphotographs with Kodak film rolls show hues of adjacent color emission wavelengths, said adjacent color emissions comprising blue color fluorescence under the epifluorescence. 18. A dye as claimed in claim 1 wherein the microphotographs with Kodak film rolls shows hues of the adjacent color emission wavelengths like when seen yellow color fluorescence under the epifluorescence microscope in microphotograph the hues of green also comes. 19. A dye as claimed in claim 1 wherein when seen orange fluorescence color under the epifluorescence microscope in microphotograph the hues of red also COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 10-NOV-2005(THU) 14:14 61 2 9453 3659 (FAX)bl Z q D) O r. u I I/ 3055-30.doc 37 comes. A dye as claimed in claim 1 wherein the cytogenetic slides seen under all fluorescences gives a counterstain effect of cells and cell components verses the background color where no specimen but only dye is present. 21. A dye as claimed in claim 1 wherein the dye is diluted with water in the ratio 1:10,000 times and this gives fluorescence of three colors at three different wavelengths. 22. A dye as claimed in claim 1 wherein the dye is diluted with water in the ratio 1:40,000 times and this gives fluorescence of three colors at three different wavelengths. 23. A dye as claimed in claim 1, wherein said organic solvents are selected from the group consisting of ethanol, methanol and acetone. 24. A dye as claimed in claim 1, wherein said UV, visible spectroscopy is from 250 nm-350 nm and the peaks are at 272 nm and 299 nm wavelengths for said dye. 15 25. A dye as claimed in claim 1, wherein said dye is included in a molecular or radioactive kit, said dye being stable when said kit is transported at room temperature. S26. A dye as claimed in claim 1 useful for: preparation of flexible polyvinyl chloride film that exhibits fluorescent colors; fluorescent colors in paints, inks, and textiles; a composition of fluorescent dye for bleaching and brightening polymer; leak detection with a full spectrum fluorescent dye; in automated chemical metering system; (0 to mark the location of crashed transport vessel; said vessel being selected from the group consisting of aircraft, life crafts, and rockets; undersea probes; photochemotherapy of skin cancers; chromatophore sunscreen component of cosmetic creams and lotions; the water miscible quality of the dye can make it easily miscible in COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 10-NOV-2005(THU) 14:14 61 2 9453 3659 (FAXJbl Z 94V J Jb)' r.UI/U54 3055-30.doc 38 moisturizers; fluorescent in situ hybridization application kit component for molecular diagnostics; component of the nonradioactive labeling and detection kits, said kits being used for a purpose selected from the group consisting of biochemistry, cell biology, immunochemistry, and molecular biology for labeling of DNA, RNA, proteins and enzymes; immunofluorescent detections; counterstain of DIG-labeled oligonucleotide probes and Anti-DIG Fab- fragments; single and multiple flow cytometry applications; fluorochrome stains for epifluorescence microscopy; S* a quick check of biocontamination in the health food industry, cosmetic I industry, 15 pharmaceutical and chemical industries; rapid estimations of biocontaminants in laboratory cultures; a rapid check of biopollutants under field conditions; competitive inhibitor of cholinesterases; in antimicrobial compositions; as a biosurfactant in toiletry compositions; a natural colorant; a bioactive composition of the dye in the ratio of 1:40000 in ultrapure water; to obtain fluorescences of three colors at three different wavelengths and a phase contrast effect under transmitted light; and (aa) various fluorescent applications to be performed in areas of sub zero temperatures. 27. A skin care composition containing the dye of claim 1 and further comprising at least one physiologically and cosmetically acceptable vehicle; said vehicle being selected from the group consisting of a diluent, dispersant and carrier. 28. A process for extraction of a natural fluorescent dye from Holothuria scabra COMS ID No: SBMI-01931614 Received by IP Australia: Time 14:24 Date 2005-11-10 1-NOV-2005(THU) 14:14 61 2 9453 3659 t( 14: 1 U1 Z5 3 -HI L Yq)3 r. ui/u.q 3055-30.doc 39 sea cucumber, which comprises the steps of: collecting said Holothuria scabra, placing said Holothuria scabra in a seawater bath, freezing said Holothuria scabra at -20 degree C, thawing said Holothuria scabra to obtain a pigment; and repeating steps and for removal of said pigment. 29. A process as claimed in claim 28 wherein the dye is diluted with water in the ratio 1:40,000 times and emits fluorescence of three colors at three different wavelengths. 30. A process as claimed in claim 28 wherein said purification of said pigments comprises treating said pigments in proportion to 250 ml of 50% ethanol crude extract when evaporated on a water-bath at 80 degree centigrade for 5 minutes to provide 2.5 gms of partially purified dye in a powder form. 31. A process as claimed in claim 28 wherein the dye is diluted with water in the 15 ratio 1:10,000 times and emits fluorescence of three colors at three different wavelengths. 32. A process as claimed in claim 28 further comprising assessing the physical characteristic of the dye by taking a sample of said dye in proportion to 2 mg/10 ml solution for spectrophotometry. 33. A process as claimed in claim 28 further comprising chemically analyzing S" said dye using a sample of said dye having a concentration of 10 mg/ml. 34. A process as claimed in claim 28, wherein said seawater bath does not require mechanical aeration. A process as claimed in claim 28, wherein steps and are repeated 3-4 times, 36. A process as claimed in claim 28, further comprising step purifying said pigment. Dated 10 November 2005 Council of Scientific and Industrial Research By its Patent Attorneys M A MARTIN ASSOCIATES COMS ID No: SBMI-01931614 Received by IP Australia: Time 14 24 Date 2005-11-10
AU58724/01A 2001-03-30 2001-03-30 A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses Ceased AU783951B2 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/IN2001/000082 WO2002079327A1 (en) 2001-03-30 2001-03-30 A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses

Publications (2)

Publication Number Publication Date
AU5872401A AU5872401A (en) 2002-10-15
AU783951B2 true AU783951B2 (en) 2006-01-05

Family

ID=32800560

Family Applications (1)

Application Number Title Priority Date Filing Date
AU58724/01A Ceased AU783951B2 (en) 2001-03-30 2001-03-30 A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses

Country Status (3)

Country Link
JP (1) JP2004517172A (en)
CN (1) CN100393814C (en)
AU (1) AU783951B2 (en)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN100457831C (en) * 2006-12-22 2009-02-04 中国科学院南海海洋研究所 Pigment extracted from fish skin and preparation process thereof
CN102165924A (en) * 2011-01-20 2011-08-31 中国科学院南海海洋研究所 Fluorescence labeling method for sea cucumber larvas
JP2013146263A (en) * 2011-12-21 2013-08-01 Azbil Corp Microorganism detecting apparatus calibration method and microorganism detecting apparatus calibration kit

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0495116A1 (en) * 1990-08-02 1992-07-22 Taiho Pharmaceutical Co., Ltd. Anti-human immunodeficiency virus agent

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPS57212200A (en) * 1981-06-23 1982-12-27 Takeda Chem Ind Ltd Preparation of echinoside a
JPH06287111A (en) * 1991-12-24 1994-10-11 Takeshi Mihara Hair growth promoting cosmetic
US6055936A (en) * 1997-01-21 2000-05-02 Collin; Peter Donald Sea cucumber carotenoid lipid fractions and process

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0495116A1 (en) * 1990-08-02 1992-07-22 Taiho Pharmaceutical Co., Ltd. Anti-human immunodeficiency virus agent

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
CHEM. ABSTRACTS, VOL. 45, NO. 6(1951): 33545 *

Also Published As

Publication number Publication date
AU5872401A (en) 2002-10-15
CN100393814C (en) 2008-06-11
CN1419588A (en) 2003-05-21
JP2004517172A (en) 2004-06-10

Similar Documents

Publication Publication Date Title
US6689391B2 (en) Natural non-polar fluorescent dye from a non-bioluminescent marine invertebrate, compositions containing the said dye and its uses
US6582730B2 (en) Natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses
Rost Fluorescence microscopy
Mann et al. On pigments, growth, and photosynthesis of phaeodactylum tricornutum 1 2
Welch et al. Fluorescence in insects
US6916492B2 (en) Natural nontoxic multicolor fluorescent protein dye from a marine invertebrate, compositions containing the said dye and its uses
US6956122B2 (en) Multiple fluorescent natural dye compound from a marine organism
AU783951B2 (en) A natural fluorescent dye obtained from a marine invertebrate, compositions containing the said dye and their uses
CN110495445A (en) A method for staining the intermuscular bone of juvenile Yellow River carp
EP1423478B1 (en) Fluorescent natural dye from a marine organism
Wilde et al. Fluorescence microscopy for algal studies
Vermeij et al. Patterns in fluorescence over a Caribbean reef slope: the coral genus Madracis
GB2373788A (en) Natural fluorescent dye extract from the invertebrate marine sea cucumber Holothuria scabra
Cole Induced fluorescence in gametophytes of some Laminariales
Lintner et al. Spectroscopic analysis of sequestered chloroplasts in Elphidium williamsoni (Foraminifera)
JP2005538032A (en) Fluorescent natural pigment derived from marine organisms
Kubota et al. Distribution pattern of GFP (green fluorescent protein) in a bivalve-inhabiting hydrozoan, Eutima japonica (Leptomedusae: Eirenidae)
Juarranz et al. Metachromatic staining and electron dense reaction of glycosaminoglycans by means of cuprolinic blue
JPH09248198A (en) Algae life and death discrimination method
Nothnagle et al. Barrier filter for fluorescence microscopy of strongly autofluorescent plant tissues. Application to actin cables in Chara.
Woodbridge III FLUORESCENT SHELLS
Kaur et al. Fluorescence in Nature
Sale et al. The 1st International Conference on Local Resource Exploitation
Marques et al. Microspectrofluorometry of ultraviolet-inducible fluorescence in supravitally-stained ascites tumour cells
Brown Unusual Pigments in a Primitive Green Alga