AU755679B2 - Homogeneous human papilloma virus capsomere containing compositions, methods for manufacture,and the use thereof as diagnostic, prophylactic or therapy - Google Patents

Description

WO 99/01557 PCT/US98/13799 HOMOGENEOUS HUMAN PAPILLOMA VIRUS CAPSOMERE CONTAINING COMPOSITIONS, METHODS FOR MANUFACTURE, AND THE USE THEREOF AS DIAGNOSTIC, PROPHYLACTIC OR THERAPY FIELD OF THE INVENTION The present invention relates to stable human papillomavirus (HPV) capsomeres and compositions containing produced by enzymatic, chemical and/or recombinant methods. Such HPV capsomeres and compositions containing are useful, as vaccines for conferring protection against human papillomavirus infection and as diagnostic agents for detection of antibodies specific to HPV L1 proteins. The present invention further relates to modified HPV L1 nucleic acid sequences which have been modified by site specific mutagenesis and/or deletion in order to favor the formation of stable capsomeres which are substantially incapable of assembly into virus-like particles.

Background of the Invention Papillomaviruses infect a wide variety of different species of animals including humans. Infection is typi- WO 99/01557 PCT/US98/13799 -2cally characterized by the induction of benign epithelial and fibro-epithelial tumors, or warts at the site of infection. Each species of vertebrate is infected by a distinct group of papillomavirus, each papillomavirus group comprising several different papillomavirus types.

For example, more than sixty different human papillomavirus (HPV) genotypes have been isolated. Papillomaviruses are highly species-specific infective agents. For example, canine and rabbit papillomaviruses cannot induce papillomas in heterologous species- such as humans. Neutralizing immunity to infection against one papillomavirus type generally does not confer immunity against another type, even when the types infect a homologous species.

In humans, papillomaviruses cause genital warts, a prevalent sexually transmitted disease. HPV types 6 and 11 are most commonly associated with benign genital warts condyloma acuminata. Genital warts are very common and subclinical or inapparent HPV infection is even more common than clinical infection. While most HPV induced lesions are benign, lesions arising from certain papillomavirus types, HPV-16 and HPV-18, can undergo malignant progression. Moreover, infection by one of the WO 99/01557 PCT/US98/13799 -3malignancy associated papillomavirus types is considered to be a significant risk factor in the development of cervical cancer, the second most common cancer in women worldwide. Of the HPV genotypes involved in cervical cancer, HPV-16 is the most common, being found in about of cervical cancers.

In view of the significant health risks posed by papillomavirus infection generally, and human papillomavirus infection in particular, various groups have reported the development of recombinant papillomavirus antigens and their use as diagnostic agents and as prophylactic vaccines. In general, such research has been focused toward producing prophylactic vaccines containing the major capsid protein (LI) alone or in combination with the minor capsid protein For example, Ghim et al, Virology, 190:548-552 (1992) reported the expression of HPV-1 L1 protein using a vaccinia expression in Cos cells which displayed conformational epitopes and the use thereof as a vaccine or for serological typing or detection.

This work is also the basis of a patent application, U.S.

Serial No. 07/903,109, filed June 25, 1992 (abandoned in favor of U.S. Serial No. 08/216,506, filed on March 22, WO 99/01557 PCT/US98/13799 -4- 1994), which has been licensed by the assignee of this application. Also, Suzich et al, Proc. Natl. Acad. Sci., 92:11553-11557 (1995) report that the immunization of canines with a recombinant COPV expressed in a baculovirus/insect cell system completely prevented the development of viral mucosal papillomas. These results are important given the significant similarities between many HPVs and COPV. For example, COPV, similar to HPVs associated with anogenital and genital papillomas cancer, infects and induces lesions at a mucosal site. Also, the L1 sequences of COPV shares structural similarities to HPV L1 sequences both at the level of DNA and protein. Given these similarities, the COPV/beagle model is useful for investigation of L1 protein containing vaccines, e.g., investigation of the protective immune response, protection from natural infection and optimization of vaccination protocols. (Id.) Also, a research group from the University of Rochester reported the production of human papillomavirus major capsid protein (LI) and virus-like particles using a baculovirus/insect cell expression system. (Rose et al, University of Rochester, WO 94/20137, published on Septem- WO 99/01557 PCT/US98/13799 ber 15, 1994). In particular, they reported the expression of the L1 major capsid protein of HPV-6 and HPV-11 and the production of HPV-6, HPV-11, HPV-16 and HPV-18 virus-like particles.

Further, a University of Queensland research group also purportedly disclosed the recombinant manufacture of papillomavirus L1 and/or L2 proteins and virus-like particles as well as their potential use as vaccines. (Frazer et al, WO 93/02189, published on February 4, 1993).

Still further, a United States government research group reported recombinant papillomavirus capsid proteins purportedly capable of self-assembly into capsomere structures and viral capsids that comprise conformational antigenic epitopes. Patent No. 5,437,951, Lowy et al, issued on August 1, 1995.) The claims of this patent are directed to a specific HPV-16 DNA sequence which encodes an L1 protein capable of self-assembly and use thereof to express recombinant HPV-16 capsids containing said HPV-16 L1 protein.

With respect to HPV capsid protein containing vaccines, it is widely accepted by those skilled in the art that a necessary prerequisite of an efficacious HPV L1 WO 99/01557 PCT/US98/13799 -6major capsid protein-based vaccine is that the L1 protein present conformational epitopes expressed by native human papillomavirus major capsid proteins (See, Hines et al, Gynecologic Oncology, 53:13-20 (1994); Suzich et al, Proc. Natl. Acad. Sci., 92:11553-11557 (1995)).

Both non-particle and particle recombinant HPV L1 proteins that present native conformational HPV L1 epitopes have been reported in the literature. It is known that L1 is stable in several oligomeric configurations, capsomeres which comprise pentamers of the L1 protein and (ii) capsids which are constituted of seventytwo capsomeres in a T=7 icosahedron structure. Also, it is known that the L1 protein, when expressed in eukaryotic cells by itself, or in combination with L2, is capable of efficient self-assembly into capsid-like structures generally referred to as virus-like particles (VLPs).

VLPs have been reported to be morphologically and antigenically equivalent to authentic virions. Moreover, immunization with VLPs has been reported to elicit the production of virus-neutralizing antibodies. More specifically, results with a variety of animal papillomaviruses (canine oral papillomavirus and bovine papillomavirus-4) WO 99/01557 PCT/US98/13799 -7have suggested that immunization with VLPs results in protection against subsequent papillomavirus infection-.

Consequently, VLPs composed of HPV L1 proteins have been proposed as vaccines for preventing diseases associated with human papillomavirus infections.

Additional studies have examined the effects of L1 deletions on capsid assembly. For example, Paintsil et al recently reported that certain carboxy-terminal residues of the BPV-1 L1 protein are not required for capsid formation. (Paintsil et al, Virol., 223:238-244 (1996)).

Moreover, at page 239, a schematic summary of the results obtained upon expression of various BPV L1 deletions generated by PCR mutagenesis is provided. In particular, this summary indicates whether such fragments result in proper (icosahedon) capsids, aberrant capsids, unstructured L1 aggregates or capsomeres. Also, Paintsil et al teach a specific carboxy-deletion wherein residues 451-495 (AC1) of the BPV-1 L1 protein were deleted.

However, there is no indication that the resultant capsomeres present conformational epitopes of native BPV-1 or whether they elicited neutralizing antisera. Also, Paintsil et al further notes at page 21, that 8 "these truncation results suggested that deletion of a more conserved region upstream of [amino acid] 471 (Fig. 4) completely perturbs the proper folding of the L1 protein". Therefore, these results would teach against making modifications involving significant carboxy-terminal deletions. Also, their experiments are limited to BPV-1 L1 deletions and mutations.

Therefore, notwithstanding what has been previously reported, there still exists a need in the art for novel HPV major capsid protein containing compositions that present conformational epitopes associated with native (wildtype) HPVs, and methods for their manufacture.

OBJECT OF THE INVENTION It is an object of the invention to provide stable HPV capsomeres which present conformational epitopes expressed by authentic (wild-type, infectious) 15 HPVvirions.

It is preferable that the invention provide stable HPV capsomeres which present at least one virus-neutralizing conformational epitope(s) expressed by authentic HPV virions by enzymatic (trypsin) digestion of purified HPV capsomere 20 and/or virus-like particles.

4 44 Further, it is desired that the invention produce stable HPV capsomeres by chemical methods, i.e. by "capping-off" one or more cysteine residues, e.g. by reacting reduced cysteine residues with compounds that prevent oxidation of sulfhydryls, e.g. alkylating agents, thereby preventing disulfide bond formation and VLP assembly.

It is also desired that the invention provide stable HPV capsomeres by expression of a DNA encoding a modified HPV L1 sequence wherein such modification comprises a carboxy deletion and/or at least one site specific mutation wherein such modification(s), upon expression, results in capsomeres that are substantially incapable of VLP assembly.

It is further desired that the invention provide modified HPV L1 nucleic acid sequences which upon expression result in stable HPV capsomeres that are substantially incapable of VLP assembly.

More preferably, that the invention provide modified HPV L1 nucleic acid sequences which comprise a carboxy-terminal deletion and/or substitution or deletion modification involving at least one cysteine residue which upon expression results in capsomeres substantially incapable of VLP assembly.

S•It is also desired that the invention provide vaccines or diagnostic compositions containing stable HPV capsomeres produced by enzymatic, 15 chemical, and/or recombinant methods and to use the stable HPV capsomeres of the present invention as vaccines for conferring protection against HPV infection.

It is desired to use the stable HPV capsomeres of the present invention for the manufacture of neutralizing polyclonal and monoclonal antibodies.

It is also desired to use the stable HPV capsomeres of the present invention as diagnostic agents for detection of anti-HPV antibodies.

BRIEF DESCRIPTION OF THE INVENTION Therefore, the invention generally relates to stable HPV capsomeres which present at least one virus-neutralizing conformational epitope expressed by an L1 protein expressed by a native (infectious) HPV, methods for their manufacture, and use thereof as diagnostic, prophylactic, and therapeutic agents.

31-10-02:14:25 ;WATERMARK PATENT ;61 3 98196010 4/ 1 7 In particular, the present invention relates to stable human papillomavirus (HPV) capsomeres, with the proviso that said human papillomavirus (HPV) capsomeres are not HPV-11 capsomeres, which: are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein; (ii) present at least one virus-neutralizing conformational epitope of the major capsid protein (L1) expresses by a native (wild-type infectious) HPV virus; and (iii) induce the production of HPV neutralizing antibodies.

As discussed in greater detail infra, it has been surprisingly discovered that HPV L1 proteins, which have been modified to favor capsomere formation, and substantially prevent the assembly of such capsomeres into VLPs, express conformational epitopes of native, infectious HPVs. In particular, they react with conformational antibodies produced against native, infectious HPVs and elicit the production of neutralizing antibodies.

These results are surprising given the significant adverse effects that even minor modifications to L1 proteins may incur. For example, it has been reported that a point mutation in the HPV-16 L1 protein disrupts assembly of the protein into virus-like particles and also impairs conformation, (Roden et al, J. Virol., 68(11):1-5 (1994)).

Also, these capsomeres afford further advantages because they should result in highly homogeneous vaccine compositions. As the subject capsomeres, unlike non- 11

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WO 99/01557 PCT/US98/13799 -12modified L1 proteins, do not give rise to virus-like particles or other aggregates to any significant extent, compositions according to the invention should be substantially free of higher molecular weight forms of the L1 proteins. This is advantageous from a clinical standpoint wherein supplying a product of high consistency may be very important, indeed essential. Also, because capsomeres are significantly smaller than VLPs, they may-be easier to purify on conventional chromatographic media, thereby increasing the ease of manufacture.

Definitions: Major capsid protein or L1 protein This refers to the structural protein of papillomavirus (PV) which constitutes the major portion of the PV capsid structure. This protein has reported application in the preparation of HPV vaccines and as a diagnostic agent.

Major capsid protein or L2 protein This refers to the structural protein of papillomavirus which constitutes a minor portion of the PV viral capsid structure.

WO 99/01557 PCT/US98/13799 -13- Virus-like particles or VLPs This refers to the capsid-like structures which result-upon expression and assembly of a papillomavirus L1 DNA sequence alone or in combination with an L2 DNA sequence. VLPs are morphologically and antigenically similar to authentic virions. VLPs may be produced in vivo, in suitable host cells, mammalian and insect host cells, or may form spontaneously upon purification of recombinant L1 proteins.

Capsomeres This refers to an oligomeric configuration of the L1 protein which is constituted of L1 pentamers. Therefore, capsomeres comprise the "monomer" units which constitute the viral capsid structure.

Stable Capsomeres This refers to capsomeres which are substantially incapable of assembly into virus-like particles. "Stable" in this context refers to the fact that these capsomeres substantially retain their capsomere morphology instead of assembling into VLPs. This is preferably accomplished by removing enough of the carboxy-terminal portion of the L1 protein to prevent or substantially inhibit VLP assem-

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WO 99/01557 PCT/US98/13799 -14bly and/or (ii) preventing or substantially inhibiting disulfide bond formation. Disulfide bond formation may be prevented by elimination of one or more cysteine residues, by a substitution or deletion modification or by chemical means, by incubation and storage in sulfhydryl reducing agents, by reaction with 3-mercaptoethanol, dithiothreitol, cysteine or other compounds which prevent oxidation of sulfhydryl groups. The free sulfhydryls on capsomeres generated by thiol reduction of VLPs are then "capped off", by reaction with alkylating agents, iodoacetamide or N-ethylmaleimide.

The subject stable capsomeres will express at least one conformational neutralizing epitope expressed by the L1 protein of a corresponding native HPV virion.

Capsids This refers to the structural portion of the papillomavirus which is comprised of capsomeres. More specifically, it is constituted of seventy-two capsomeres in a T=7 icosahedron structure.

Conformational L1 HPV Epitope This refers to an epitope expressed on the surface of the subject stable papillomavirus capsomeres which is also WO 99/01557 PCT/US98/13799 expressed by an. L1 protein of a corresponding native (wild-type), infectious HPV. It is well accepted by those skilled in the art that the presentation of conformational epitopes is essential to the efficacy (both as prophylactic and diagnostic agents) of HPV L1 protein immunogens.

Conformational Neutralizing L1 HPV Epitope This refers to an epitope expressed on the surface of the subject stable papillomavirus capsomeres which is also expressed by an L1 protein of a corresponding native (wild-type), infectious HPV, and which elicits neutralizing antibodies. It is well accepted by those skilled in the art that the presentation of conformational neutralizing epitopes is essential to the efficacy (both as prophylactic and diagnostic agents) of HPV L1 protein immunogens.

Conformational Antibody This refers to an antibody that specifically binds an epitope expressed by a naturally occurring (wild-type) HPV L1 protein, major capsid protein expressed on the surface of a native HPV.

WO 99/01557 PCT/US98/13799 -16- Modified HPV L1 DNA This refers to an HPV L1 DNA modified such that upon expression it results in an HPV L1 protein that presents at least one virus-neutralizing HPV L1 conformational epitope, and forms stable capsomeres that are substantially incapable of assembly into virus-like particles.

"Substantially incapable" is relative to non-modified HPV L1 proteins which are known to spontaneously assembly into VLPs when expressed by suitable host cells, mammalian or insect cells, or in vitro during protein purification. Preferably, the modification will prevent VLP assembly altogether. However, the invention embraces modifications which substantially inhibit VLP formation, by at least 50%, more preferably by at least and most preferably by at least 95%. This can be determined by known methods, by visual detection of VLPs, by electron microscopy. The HPV L1 DNA may further comprise additional modification(s), additions, substitutions, deletions, provided that they do not adversely affect presentation of conformational neutralizing epitope(s). Preferably, modifications which prevent VLP assembly will comprise carboxy-terminal deletions and/or WO 99/01557 PCT/US98/13799 -17removal of at least one cysteine residue that inhibits or prevents VLP assembly.

Modification which inhibits disulfide bond formation This refers to a modification of an HPV L1 DNA or corresponding protein which inhibits disulfide bond formation. Preferably, this is effected by deletion and/or substitution of at least one cysteine residue. However, such modifications also include the replacement of one or more amino acids, which are sufficiently proximate to a cysteine residue, to sterically hinder the cysteine residue and thereby prevent disulfide bond formation or interfere with capsomere-capsomere interactions. Alternatively, cysteine residues involved in VLP assembly can be chemically "capped-off", reaction with 3-mercaptoethanol or dithiothreitol, followed by P-alkylation with iodoacetamide or N-ethylmaleimide. As discussed in greater detail infra, such cysteine residue(s) are comprised, in particular, in the carboxy-terminal portion of the protein, more specifically in the region of the L1 protein spanning amino acids 30 to 86, inclusive, relative to the carboxy terminal end of the L1 protein. In the specific case of HPV-11, a conserved cysteine is found at position WO 99/01557 PCT/US98/13799 -18- 424 of the L1 protein, which apparently affects VLP assembly.

DETAILED DESCRIPTION OF FIGURES Figure SDS/PAGE analysis of purified HPV-11 L1 protein. The protein was mixed with sample preparation buffer in the absence (lane 1) or presence (lane 2) of 2 mM DTT and boiled for 2 minutes prior to gel electrophoresis. Shown on the left are the positions at which molecular weight standards (in Da x 10-3) migrated.

Figure 2: 30% sucrose cushion analysis of HPV-11 VLP disassembly. HPV-11 preparations were treated at 4 0 C as described in the text, and samples were taken at the top or bottom of the sucrose cushion prior to gel electrophoresis. Group 1, untreated, purified HPV-11 VLP starting material in PBS. Group 2, VLPs incubated with SME for 16 hours. Group 3, VLPs incubated with 5% SME for 1 hour. Group 4, VLPs incubated with 2% SME for 16 hours.

Group 5, VLPs incubated with 0.5% SME for 16 hours. Group 6, VLPs incubated with 10 mM DTT, 5mM EDTA for 16 hours.

Figure 3: 5-20% linear sucrose gradient analysis of disassembled HPV-11 VLPs. VLPs in PBS were incubated with WO 99/01557 PCT/US98/13799 -19- SME or 200 mM NaHCO 3 pH 9.6(b) for 16 hours at 4 0

C

and then centrifuged on a 5-20% linear sucrose gradient as described in the text. The gradient was collected in fractions (0.5 ml), and the pellet was resuspended in 0.5 ml PBS. Shown is an immunoblot demonstrating the position of the L1 protein across the gradient. Also indicated are the peak positions at which sedimentation standards migrated when run on separate gradients.

Figure 4: 10-65% linear sucrose gradient analysis of HPV-11 VLPs in various states of assembly. An aliquot of purified VLP starting material was incubated with SME for 16 hours at 4 0 A portion of SME-treated VLPs were then reassembled by dialysis into PBS-0.5 NaC1 to remove reducing agent The samples are then centrifuged on 10-65% linear sucrose gradients as described in the text. Each gradient was collected in 12 fractions (1 ml), and the pellet was resuspended in 1 ml PBS.

Shown are immunoblots demonstrating the positions at which the L1 protein migrated on the different gradients. Also indicated are the peak positions at which sedimentation standards migrated, as in Fig. 3.

WO 99/01557 PCT/US98/13799 Figure 5: Electron micrographs of HPV-11 VLPs in various states of assembly. VLPs, treated as described, were stained with 2% phosphotungstic acid, applied to grids, and photographed at magnifications of 15-25,000 times, a, purified VLP starting material, b, VLPs disassembled to the level of capsomeres by incubation with 1ME for 16 hours at 4 0 C. c, VLPs reassembled from disassembled VLPs by dialysis into PBS-0.5 NaCl, d, the central region of image c at greater magnification. Scale bar: a,c 200 nm; 100 nm.

Figure 6: Reaction of intact and disassembled VLPs with HPV-11 structure-specific monoclonal antibodies.

HPV-11 L1 VLP starting material VLPs disassembled by treatment with 5% ME either without or with (C) subsequent dialysis into PBS-0.5 M NaCl to remove reducing agent, and VLPs disassembled in the presence of 200 mM carbonate, pH 9.6 and then dialyzed into PBS-0.5 M NaCl were attached to the wells of microtiter plates. HPV- 11 structure-specific monoclonal antibodies H11.F1 (HPV-11 neutralizing; V) and H11.A3 (HPV-11 non-neutralizing; were tested for immunoreactivity to the bound antigens in an ELISA as described in the Materials and Methods.

WO 99/01557 PCT/US98/13799 -21- Reactivity with monoclonal antibody AU1 which recognizes a linear epitope found on HPV-11 L1, was used as a control to demonstrate antigen attachment to the microtiter wells.

Figure 7: Anti-HPV-11 capsid and anti-HPV-11 capsomere sera were incubated with HPV-11 virions for 75 min at 37 0 C before addition to HaCaT cells. Alternatively, virions were added to cells without pre-incubation with serum, or virions were pre-incubated with pre-immune serum prior to infection of HaCaT cells. Six day post-infection, the cells were harvested and total RNA was extracted. Ten percent of the total RNA was used for cDNA synthesis with an oligo d-T primer. Ten percent of the cDNA was then used as template for nested PCR using primers specific for the HPV-11 ElAE4 spliced message. PCR products were separated on 2% agarose gels. Gels were stained with ethidium bromide and examined under UV light for the presence of the 0.6 kb E1^E4 band (top). PCR amplification of S-actin was performed on all cDNA samples as an internal control (bottom). The expected size of the 6actin band is 0.6 kb. Lane A contains molecular size markers. Lanes B and C contain PCR products obtained with WO 99/01557 PCT/US98/13799 -22- RNA isolated from cells infected with HPV-11 pre-incubated with a 10- 2 dilution of normal rabbit serum. The ability to detect the E1^E4 PCR product indicates that virus is not neutralized by this control serum.. Lanes D and Erepresent reactions carried out with RNA from cells incubated with virus that had not been pre-incubated with serum, and lane F and G are from cells incubated without virus. As expected, the EA1E4 band is detected in virusinfected but not in uninfected cells. Lanes H-L contain PCR products from-cells infected with virus that had been pre-incubated with serial logo dilutions of anti-HPV-11 capsid antiserum (10-3-10-7). This antiserum neutralizes the virus at all dilutions tested. Lanes M-Q show PCR products obtained when cells were infected with virus preincubated with serial logo dilutions of anti-HPV-ll capsomere serum (10-107). This antiserum effectively neutralizes the virus out to a 10-6 dilution.

DETAILED DESCRIPTION OF THE INVENTION As discussed, the present invention generally relates to stable HPV capsomeres which present at least one virusneutralizing conformational epitope of a native (infec- 31-10-02;14:25 ;WATERMARK PATENT ;61 3 98196010 5/ 1 7 23 tious) HPV, which are substantially incapable of assembly into VLPs (when subjected to conditions that normally result in VLP assembly).

The present invention relates to stable human papillomavirus (HPV) capsomeres, with the proviso that said human papillomavirus (HPV) capsomeres are not HPV-11 capsomeres, which are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein; (ii) present at least one virus-neutralizing conformational epitope of the major capsid protein (L1) expresses by a native (wild-type infectious) HPV virus; and (iii) induce the production of HPV neutralizing antibodies.

The present invention also provides a vaccine for conferring protection against HPV comprising stable human HPV capsomeres as well as an HPV L1 DNA other than HPV-11 L1 DNA that contains a modification such that upon expression it results in the production of stable HPV capsomeres which are substantially incapable of assembly into virus-like particles and which present at least one virus-neutralizing conformational epitope expressed by a native HPV virion.

The present invention was based, in part, on observations made by the inventors during quantitative disassembly and reassembly of HPV-11 VLPs in vitro. Specifically, it was observed that maximal VLP disassembly required prolonged exposure to very high concentrations of reducing agent. This suggested that stabilizing disulfide bonds are buried and inaccessible, and that exposure of these bonds to solvent by local fluctuations is very infrequent.

However, this observation conflicted to some extent with other reported experiments which suggested that residues in the C-terminal end of the L1 WO 99/01557 PCT/US98/13799 -24deletion (44 amino acids) exhibited significantly inhibited ability to form capsids (Paintsil et al, Virology, 223:238-244 (1996)). Moreover, it was recently reported that an HPV-1 protein containing an even larger C-terminal deletion (86 amino acids) yielded capsomeres apparently incapable of forming capsid-like structures. (Li et al, J. Virol., 71:2988-2995 (1997)). These results suggested the importance of C-terminal residues in VLP formation.

In this regard, it has been reported that in the 3.8 A structure of the SV40 virus, that the C-terminal domain of the VP1 protein is involved in the formation of intracapsomeric bonds which stabilize the capsid, by extending across the space between capsomeres and forming part of the extended 3-sheet of the neighboring capsomeric L1 protein. However, the requirement of disulfide bonds for this interaction was not resolved in the crystal structure because of disorder in this portion of the molecule (Liddington et al, Nature, 354:278-284 (1991)). Also, it was previously reported that 15 A strands connecting capsomeres can be seen, at low resolution, in the cryoelectron microscopic reconstruction of the BPV structure (Baker et al, Biophys 60:1445-1456 (1991); Belnap et WO 99/01557 PCT/US98/13799 al, J. Mol. Biol., 259:249-263 (1996)); and also in negatively-stained HPV virions (Yabe et al, Virology, 227:13- 23 (1997)). These results suggested that linker arms may stabilize papillomavirudae capsids. [However, it is noted that these references did not provide any information concerning what specific residues or role of other factors which potentially could have affected PV capsid formation and stability.] The present invention was further based on experiments which demonstrated that capsomeres generated from HPV-11 VLPs, even after long exposure to high concentration of reducing agent, still retain structural epitopes found on native VLPs (disclosed infra in the Examples).

This was demonstrated in part based on their reactivity with a panel of antibodies that specifically react with HPV-11 L1 VLPs but do not with "denatured" L1 proteins.

These results were surprising as it had previously been reported that the binding of two of the tested antibodies was VLP-dependent. (Ludmeyer et al, J. Virol., 71:3834- 3837 (1997)). Also, it was demonstrated (also disclosed infra) that HPV-11 capsomeres are capable of eliciting the production of virus-neutralizing antibodies (also dis- WO 99/01557 PCT/US98/13799 -26closed infra in Example. Therefore, these results and observations in combination suggested to the inventors the suitability of stable HPV capsomeres as immunogens for conferring protection against HPV infection..

As discussed, given their resistance to VLP formation, the stable capsomeres potentially will give rise to vaccines of enhanced homogeneity. Also, HPV capsomeres, because of their smaller size and molecular weight relative to VLPs, should be easier to purify then VLPs, thereby facilitating vaccine manufacture.

More specifically, these results, most especially the fact that capsomere formation was favored by very high reducing agent, suggested that one or more cysteine residues are likely involved in VLP assembly and disassembly.

Moreover, the fact that deletions in the carboxy terminal portion of the L1 protein inhibits (or prevents) VLP assembly further suggested that at least one cysteine residue involved in VLP assembly is apparently comprised in the carboxy-terminal portion of the L1 protein.

In general, stable capsomeres will be produced by one of two general methods. The first method comprises expression of a modified HPV L1 DNA which contains at least WO 99/01557 PCT/US98/13799 -27one modification(-s) such that upon expression it results in the production of stable capsomere. This first method comprises the following steps: obtaining a desired HPV L1 DNA sequence; (ii) introducing suitable modification(s) therein by deletion and/or site-specific mutagenesis that prevent VLP assembly and result in stable capsomere upon expression; (iii) expressing said modified HPV L1 DNA in suitable host cells, and (iv) recovering capsomere from said host cells.

The second method comprises expression of a nonmodified HPV L1 protein, and modifying the resultant expression product to produce stable capsomere. Specifically, the second method will comprise the following steps: obtaining a desired HPV L1 DNA; (ii) expressing said HPV L1 DNA in suitable host cells; (iii) purifying the resultant VLPs under conditions high reducing agent concentration) that provide for the dissociation of said VLPs into capsomere and chemical- WO 99/01557 PCT/US98/13799 -28ly "capping off" to prevent VLP reassembly, by alkylating free sulfhydryls; or (iv) purifying the resultant VLPs or capsomere produced upon expression of the HPV L1 DNA during step (ii) and digesting said VLPs or capsomeres with a protease trypsin) under conditions that result in stable capsomere wherein a sufficient amount of the carboxyterminal portion of the L1 protein has been removed which is required for VLP assembly.

Many HPV L1 DNAs have been reported in the literature and are publicly available. (See, Baker, Sequence Analysis of Papillomavirus, Genomes, pp. 321-384; Long et al, U.S. Patent No. 5,437,931, Cole et al, J. Mol Biol., 193:599-608 (1987); Danos et al, EMBO 1:231-236 (1982); Cole et al J. Virol., 38(3):991-995 (1986).) Also, it is well known that HPV L1 DNAs exhibit significant homology. Therefore, a desired HPV L1 DNA can easily be obtained, by the use of a previously reported HPV L1 DNA or a fragment thereof as a hybridization probe or as a primer during polymerization chain reaction (PCR) amplification. Indeed, numerous HPV L1 DNAs have been cloned and expressed.

WO 99/01557 PCT/US98/13799 -29- Preferably, the HPV L1 DNA said in the subject invention will be derived from an HPV which is involved in cancer or condyloma. acuminata, HPV-16, HPV-18, HPV- 31, HPV-33, HPV-35, HPV-39, HPV-45, HPV-51, HPV-52, and HPV-56 are involved in cancer, and HPV-6, HPV-11, HPV-42, HPV-43, HPV-44, HPV-54, HPV-55,and HPV-70, are involved in warts. However, the subject stable capsomeres may be produced from any desired HPV L1 DNA.

According to the first embodiment of the invention, the selected HPV L1 DNA will be modified such that the modified L1 DNA upon expression results in stable capsomeres which do not significantly assemble into larger oligomers such as VLPs and which present at least one virus-neutralizing conformational epitope of a native, infectious HPV. This will be effected by introducing one or both of the following modifications: deletion of up to 86 carboxy-terminal residues, and more preferably deletion of from about 30 to 86 carboxy-terminal residues inclusive; and (ii) introducing one or more site specific modifications which inhibit or prevent disulfide bond formation, in particular disulfide bond(s) which are involved in VLP WO 99/01557 PCT/US98/13799 assembly. It is noted that if the L1 protein contains modifications that prevent. or inhibit disulfide bond formation, it may not be necessary to delete carboxyterminal amino acids to generate stable capsomers.

Methods for introducing desired deletions in DNA sequences are well known in the art. For example, carboxy-terminal deletions can be introduced by cleaving the L1 DNA with appropriate restriction enzyme(s). Alternatively, L1 deletions can be constructed by PCR mutagenesis of the L1 gene such as described by Paintsil et al (Virology, 223:238-244 (1996)). Still alternatively, an HPV L1 DNA containing a deletion in the carboxy-terminal end of the L1 gene can be made by DNA synthesis.

Similarly, methods for introducing desired site specific mutations in DNA sequences are well known.

Preferably, the selected HPV L1 DNA will be mutagenized by removal of at least one cysteine residue involved in VLP assembly. As discussed, this can be accomplished by a substitution modification, substituting a selected cysteine codon with another codon, or by deletion. Substitution mutations are preferred as this may reduce the potential of adversely affecting the three-dimensional WO 99/01557 PCT/US98/13799 -31structure of the resultant protein and the presentation of desired conformational epitopes. Especially preferred cysteine residues targeted for modification are those at the carboxy-terminal portion of the protein, most especially those contained within carboxy-terminal 86 amino acids of the L1 protein. However, other cysteine residues may also potentially be modified provided that they do not impair capsomere production and presentation of conformational epitopes upon expression. Suitable methods for introducing mutations in PV L1 DNAs are also disclosed in Paintsil et al In the specific case of HPV-11, a cysteine residue targeted for modification is found at position 424.

Alternatively, disulfide bond formation may be prevented by modification of residues proximate to cysteine residues, by introduction of amino acids which sterically hinder disulfide bond formation or interfere with capsomere-capsomere interactions.

While stable capsomeres should result from either of these modifications alone, the introduction of both carboxy deletions and cysteine residue modifications into an HPV-L1 sequence may impart synergistic effects. Moreover, WO 99/01557 PCT/US98/13799 -32as noted in this embodiment of the invention, the deletion of fewer than 86 carboxy-terminal amino acids may be effected, thereby potentially retaining conformational epitopes that may be present in this portion of the L1 protein. These modified or non-modified L1 DNA will then be expressed in a selected expression system.

The selected host and expression vector will be cultured under conditions that favor the production of the subject stable HPV capsomeres. This will largely depend upon the selected host system and regulatory sequences contained in the vector, whether expression requires induction. After expression, the HPV capsomeres will be recovered from the host cells. The means of recovery will also depend to some extent on the host/vector system.

For example, if an intracellular expression vector is selected, the host cells will need to be lysed and the HPV capsomeres recovered from the lysate. By contrast, if the expression vector contains sequences that facilitate secretion, HPV capsomeres can be recovered directly from the culture medium. Methods for recovery of heterologous proteins from recombinant host cells and culture medium are well known in the art.

WO 99/01557 PCT/US98/13799 -33- The subject modified HPV L1 sequences may be expressed in any host cell that provides for the expression of recoverable yields of HPV capsomeres. Suitable host systems for expression of recombinant proteins are well known and include, by way of example, bacteria, mammalian cells, yeast, and insect cells. A preferred expression system comprises the baculovirus/insect cell system used in the examples as this system provides for high protein yields. However, HPV L1 proteins can be produced in other systems, in particular bacteria and yeast.

Suitable vectors for cloning of expression of the subject HPV L1 encoding DNA sequences are well known in the art and commercially available. Further, suitable regulatory sequences for achieving cloning and expression, promoters, polyadenylation sequences, enhancers, selectable markers are also well known. The selection of appropriate sequences for obtaining recoverable protein yields is routine to one skilled in the art.

As discussed, when expressing the subject modified HPV L1 DNAs, the host cells should only express HPV L1 protein in the form of HPV capsomeres (as the L1 sequence has been modified to prevent VLP assembly). However, as WO 99/01557 PCT/US98/13799 -34discussed, the present invention further embraces the expression of non-modified HPV L1 DNAs, and the use of the resultant expression product to produce stable HPV capsomeres.

This aspect of the invention will preferably be conducted by expression of non-modified HPV L1 DNAs in a selected host/vector system, recovery of resultant HPV VLPs, and the conversion of said VLPs into stable capsomeres. It is well known that non-modified HPV L1 DNAs upon expression in eukaryotic cells may spontaneously assemble into VLPs, or in the case of cells wherein assembly does not occur in vivo (bacterial cells) this may occur during purification.

While VLPs have reported application in HPV vaccines and diagnostics, the object of the present invention is to produce stable capsomeres, as it has been discovered that they present conformational neutralizing epitopes and induce neutralizing antisera.

This can be accomplished, by enzymatic treatment of the HPV VLPs with an appropriate enzyme, e.g., trypsin, under conditions that remove the carboxy-terminal portion of the HPV VLPs. In the specific case of HPV-11 WO 99/01557 PCT/US98/13799 VLPs, proteotype digestion with trypsin has been reported to remove the 86 terminal amino acids. (Li et al, J.

Virol 71:2988-2995 (1997)). Moreover, said limited proteolytic digestion of purified HPV-11 VLPs results in a homogeneous population of stable HPV capsomeres, i.e., which are resistant to VLP assembly. (Li et al, J.

Virol., 71:2988-2995 (1997)).

Alternatively, the expressed HPV L1 proteins can be disassembled during the course of HPV capsomere purification. This can be effected by, conducting all the purification steps in the presence of high concentration of reducing agent, on the order of 1% to 5% by weight of reducing agent, -mercaptoethanol. This is discussed in greater detail in the Examples.

Reactive sulfhydryls on the purified capsomeres can be chemically "capped-off", thereby preventing disulfide bond formation (between cysteine residues on different capsomeres) by reaction of cysteine residues with alkylating agents, such as iodoacetamide after reduction.

As discussed, the present invention should be broadly applicable to any HPV L1 sequence. There are a variety of PV types known in the art. Further, particular types of WO 99/01557 PCT/US98/13799 -36- PVs are associated with particular infections such as flatwarts, cutaneous warts, epidermodysplasia verruciformis, lesions and cervical cancer. Over 60 different HPV types have been identified in clinical lesions by viral nucleotide sequence homology studies. See, for example, Jenson et al, "Human papillomaviruses" In: Belshe, R. ed., Textbook of human virology, Second Edition, MASS:PSG, 1989:951 and Kremsdorf et al, J. Virol., 52:1013-1018 (1984). The HPV type determines, in part, the site of infection, the pathological features and clinical appearance as well as the clinical course of the respective lesion.

Because it is believed that there is little or no cross-immunity for HPV types and immunity to infection is HPV type-specific, it will be necessary to produce recombinant HPV capsomere for each specific HPV type upon which protection or treatment is needed. However, due to the homology between the L1 proteins and genes, hybridization techniques can be utilized to isolate the particular L1 gene of interest. Nucleotide probes selected from regions of the L1 protein which have been demonstrated to show sequence homology, can be utilized to isolate other L1 genes. Methods for hybridization are known in the art.

WO 99/01557 PCT/US98/13799 -37- See, for example, Nucleic Acid Hybridization, A Practical Approach, IRL Press, Washington, D.C. (1985); Molecular Cloning, A Laboratory Manual, Maniatis et al, eds., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1982); and Molecular Cloning, A Laboratory Manual, Sambrook et al, eds., Cold Spring Harbor Laboratory, Second Edition, Cold Spring Harbor, NY (1989). Alternatively, PCR methods can be utilized to amplify L1 genes or gene fragments.

See, for example, U.S. Patent Nos. 4,683,195; 4,683,202; and 4,800,159.

Virus particles can also be isolated for a particular papillomavirus type, the DNA cloned, and the nucleic acid sequences encoding L1 proteins isolated. Methods for isolation of viral particles and cloning of virus DNAs have been reported. See, for example, Heilman et al. J.

Virology, 36:395-407 (1980); Beaudenon et al, Nature, 321:246-249 (1986); Georges et al, J. Virology, 51:530-538 (1984); Kremsdorf et al, J. Virology, 52:1013-1018 (1984); Clad et al, Virology, 118:254-259 (1982); DeVilliers et al, J. Virology, 40:932-935 (1981); and European Patent Application 0133123.

WO 99/01557 PCT/US98/13799 -38- Alternatively, the L1 protein for a particular human papillomavirus can be isolated, the amino acid sequence determined and nucleic acid probes constructed based on the predicted DNA sequence. Such probes can be utilized in isolating the L1 gene from a library of the papillomavirus DNA. See, for example, Suggs et al, PNAS, 78(11):6613-6617 (1981). See also, Young and Davis, PNAS, 80:1194 (1983).

Since the HPV capsomere must express at least one neutralizing conformational epitope expressed by an intact, infectious HPV, the particular expression system is important to the invention. An expression system must be utilized which provides for the production of capsomeres having appropriate conformation. Such expression systems should desirably also produce high levels of capsomere.

Generally, the expression system will comprise a vector having the L1 protein of interest and the appropriate regulatory regions as well as a suitable host cell.

As discussed, baculovirus vectors are preferably utilized. A baculovirus system offers the advantage that a large percentage of cells can be induced to express protein due to the use of infection rather than transfec- WO 99/01557 PCT/US98/13799 -39tion techniques. While baculovirus is an insect virus and grows in insect cells (SF9), these cells retain many of the eucaryotic mechanisms for processing-of proteins including glycosylation and phosphorylation which may be important for generating proteins of appropriate conformation. Baculovirus vector systems are known in the art.

See, for example, Summers and Smith, Texas Agricultural Experimental Bulletin No. 1555 (1987); Smith et al, Mol.

Cell Biol., 3:2156-2165 (1985); Posse, Virus Research, 5:4359 (1986); and Matsuura, J. Gen. Virol., 68:1233-1250 (1987). Also, it has been reported that baculovirus/infected cells express HPV L1 proteins exhibiting appropriate conformation.

For expression in an appropriate expression system, an L1 gene or modified L1 gene is operably linked into an expression vector and introduced into a host cell to enable the expression of the L1 protein by that cell. The gene with the appropriate regulatory regions will be provided in proper orientation and reading frame to allow for expression. Methods for gene construction are known in the art. See, in particular, Molecular Cloning, A Laboratory Manual, Sambrook et al, eds., Cold Spring WO 99/01557 PCT/US98/13799 Harbor Laboratory, Second Edition, Cold Spring Harbor, NY (1989) and the references cited therein.

A wide variety of transcriptional and regulatory sequences may be employed. The signals may be- derived from viral sources, where the regulatory signals are associated with a particular gene which has a high level of expression. That is, strong promoters, for example, of viral or mammalian sources, will be utilized. In this manner, the optimum conditions for carrying our the invention include the cloning of the L1 gene into an expression vector that will overexpress conformationally-dependent virus-neutralizing epitopes of the L1 protein in transfected or infected target cells.

The suitability of the particular stable HPV capsomeres produced according to the invention as vaccines or as diagnostic agents is confirmed by reaction with antibodies or monoclonal antibodies which react or recognize conformational epitopes present on the intact virion and based on their ability to elicit the production of neutralizing antiserum. Suitable assays determining whether neutralizing antibodies are produced are known to those skilled in the art. Further, this application teaches (in WO 99/01557 PCT/US98/13799 -41- Example 6) an in vitro assay suitable for determining whether the HPV capsomere elicits neutralizing antibodies.

This is an essential characteristic of HPV capsomeres which are to be used in HPV vaccines. In this manner, it can be verified whether the HPV capsomeres will confer protection against HPV infection. Thus, other expression vectors and expression systems can be tested for use in the invention.

As discussed, the capsomeres of the present invention can be utilized to detect, diagnose, serotype, and treat papillomavirus infection. When used for diagnosis or serotyping, capsomeres according to the invention may be labeled using any of a variety of labels and methods of labeling. Examples of types of labels which can be used in the present invention include, but are not limited to, enzyme labels, radioisotopic labels, non-radioactive isotopic labels, fluorescent labels, toxin labels, and chemiluminescent labels.

Examples of suitable enzyme labels include malate hydrogenase, staphylococcal nuclease, isomerase, yeast-alcohol dehydrogenase, alpha-glycerol phosphate dehydrogenase, triose phosphate isomerase, WO 99/01557 PCT/US98/13799 -42peroxidase, alkaline phosphatase, asparaginase, glucose oxidase, beta-galactosidase, ribonuclease, urease, catalase, glucose-6-phosphate dehydrogenase, glucoamylase, acetylcholine esterase, etc.

Examples of suitable radioisotopic labels include 3

H,

1251, 1311, 32 p, 35 S, 51 Cr, "To, 58 Co, sFe, 75 Se, 152 Eu, 90

Y,

67 Cu, 217 Ci, 211 At, 212 Pb, 4Sc, and 109 Pd.

Examples of suitable fluorescent labels include a 152 Eu label, a fluorescein label, an isothiocyanate label, a rhodamine label, a phycoerythrin label, a phycocyanin label, and allophycocyanin label, an o-phthaldehyde label, an fluorescamine label, etc.

Examples of suitable toxin labels include diphtheria toxin, ricin, and cholera toxin. Examples of chemiluminescent labels include a luminal label, an isoluminal label, an aromatic acridinium ester label, and imidazole label, and acridinium salt label, an oxalate ester label, a luciferin label, a luciferase label, an aequorin label, etc.

Those of ordinary skill in the art will know of other suitable labels which may be employed in accordance with the present invention. The binding of these labels to WO 99/01557 PCT/US98/13799 -43consomers can be accomplished using standard techniques commonly known to those of ordinary skill in the art.

Typical techniques are described by Kennedy, et al, Clin. Chim. Acta, 70:1-31 (1976), and Schurs, et al, Clin. Chim. Acta, 81:1-40 (1977). Coupling techniques mentioned in the latter are the glutaraldehyde method, the periodate method, the dimaleimide method, the m-maleimidobenzyl-N-hydroxy-succinimide ester method, all these methods incorporated by reference herein.

The detection of the anti-HPV antibodies using the subject capsomere can be improved through the use of carriers. Well-known carriers include glass, polystyrene, polypropylene, polyethylene, dextran, nylon, amylases, natural and modified celluloses, polyacrylamides, agaroses and magnetite. The nature of the carrier can be either soluble to some extent or insoluble for the purposes of the present invention. Those skilled in the.art will note many other carriers suitable for binding proteins, or will be able to ascertain the same by use of routine experimentation.

The most important aspect of the present invention, however, involves the development of PV type-specific WO 99/01557 PCT/US98/13799 -44vaccines. The vaccines of the invention will contain an amount of the subject stable HPV capsomeres sufficient to induce formation of neutralizing antibodies in the host contained in a pharmaceutically acceptable carrier.

Administration of the subject capsomere containing vaccines may be effected by any pharmaceutically acceptable means, parenterally, locally or systemically, including by way of example, oral, intranasal, intravenous, intramuscular, and topical administration. The manner of administration depends on factors including the natural route of infection. The dosage administered will depend upon factors including the age, health, weight, kind of concurrent treatment, if any, and nature and type of the particular human papillomavirus. The vaccine may be employed in dosage form such as capsules, liquid solutions, suspensions, or elixirs, for oral administration, or sterile liquid formulations such as solutions or suspensions for parenteral or intranasal use. An inert, immunologically acceptable carrier is preferably used, such as saline or phosphate-buffered saline.

The vaccines will be administered in therapeutically effective amounts. That is, in amounts sufficient to WO 99/01557 PCT/US98/13799 produce a protective immunological response. Generally, the vaccines will be administered in dosages ranging from about 0.1 mg protein to about 20 mg protein, more generally about 0.001 mg to about 100 mg protein. A single or multiple dosages can be administered.

The method of the present invention makes possible the preparation of HPV capsomere containing vaccines for preventing papillomavirus infection. Further, by following the methods of the invention, vaccines for any immunogenic type of human specific papillomavirus can be made.

As more than one PV type may be associated with PV infections, the vaccines may comprise stable HPV capsomeres derived from more than one type of PV. For example, as HPV 16 and 18 are associated with cervical carcinomas, therefore a vaccine for cervical neoplasia may comprise capsomere of HPV 16; of HPV 18; or both HPV 16 and 18.

In fact, a variety of neoplasia are known to be associated with PV infections. For example, HPVs 3a and have been associated with flat warts. A number of HPV types have been reported to be associated with epidermodysplasia verruciformis (EV) including HPVs 3a, 5, 8, 9, and 12. HPVs 1, 2, 4, and 7 have been reported to be WO 99/01557 PCT[US98/13799 -46associated with cutaneous warts and HPVs 6b, lla, 13, and 16 are associated with lesions of the mucus membranes.

See, for example, Kremsdorf et al, J. Virol., 52:1013-1018 (1984); Beaudenon et al, Nature, 321:246-249 (1986); Heilman et al, J. Virol., 36:395-407 (1980); and DeVilliers et al, J. Virol., 40:932-935 (1981). Thus, the subject vaccine formulations may comprise a mixture of capsomere from different HPV types depending upon the desired protection.

As indicated, the HPV capsomeres of the invention can also be utilized for serotyping and for incorporation in serotyping kits.

For serological testing, the kits will comprise the subject HPV capsomere and means for detection such as enzyme substrates, labelled antibody, and the like.

Having now generally described the invention, the following examples are offered by way of illustration and not intended to be limiting unless otherwise specified.

EXAMPLES

The following materials and methods were used in the Examples.

WO 99/01557 PCT/US98/13799 -47- Chemicals The anti-HPV mouse monoclonal antibody AU1 was purchased from Berkely Antibody Co., monoclonal antibodies H11.F1 and H11.A3 were purchased from Pennsylvania State University (Christensen et al., 1990), horseradish peroxidase (HRP)-labelled goat anti-mouse IgG was purchased either from Southern Biotechnology Associates, Inc. or Gibco/BRL, 10X phosphate-buffered saline (PBS) minus Ca 2 or Mg 2 was from Gibco/BRL, ECL reagents were purchased from Amersham, protein molecular weight standards were purchased from BioRad, and formvar/carbon-coated copper grids and phosphotungstic acid were purchased from Electron Microscopy Sciences. All other reagents were purchased from Sigma.

HPV-11 VLPs HPV-11 L1 proteins were heterologously expressed in Trichoplusia ni (High Five®) cells infected with recombinant baculovirus encoding the complete L1 open reading frame downstream of the polyhedron promoter as described (Ghim et al, Immunology of Human Papillomaviruses, Plenum, NY, pp 147-152 (1994). Cells were harvested approximately 72 hours post-infection, pelleted by centrifugation, and WO 99/01557 PCT/US98/13799 -48frozen. For preparation of VLPs (all steps performed at the cell paste was resuspended in homogenization buffer (20 mM NaH 2

PO

4 150 mM NaCl, pH 7.4, containing mg/ml leupeptin, 1 mg/ml aprotinin, and 1 mg/ml pepstatin A) and lysed at -3,000 PSI in a microfluidizer (Microfluidics model HC8000/3A). The homogenized lysate was then centrifuged at 100,000 x g for 90 minutes, and the supernatant removed. The pellet, containing HPV-11 VLPs, was resuspended in PBS containing CsC1 (405 g/L) and centrifuged at 66,000 x.g for 90 minutes to remove a contaminating buoyant layer. The clarified lysate was then centrifuged overnight at 83,000 x g in a vertical rotor, and the VLP band was collected (at a density of 1.28 g/cm 3 The VLPs were diluted 2-fold in NaCl, to reduce the density of the solution, and layered over a two component step gradient composed of 30% and 63% sucrose (w/w in PBS -0.5M NaC1). The gradients were centrifuged at 167,000 x g for 3 hours in a vertical rotor, and the purified VLP band was collected at the interface between the 30% and 63% sucrose solutions. The VLPs were then dialyzed into selected buffers (either PBS, or PBS with NaCl added to a final concentration of 0.3 M WO 99/01557 PCT/US98/13799 -49or 0.5 and stored at 40 C. Protein concentration was determined by the Bradford assay (Bradford, 1976) using bovine serum albumin as the reference protein, and L1 content was determined as described by Suzich et al., Proc. Natl. Acad. Sci. USA, 92:11553-11557 (1995). Starting with 25-30 g of wet cell paste, the above protocol yielded 15-25 mg of HPV-11 VLPs.

Sucrose gradient centrifugation Three types of sucrose gradients were used in these experiments. First, centrifugation on 30% sucrose cushions was used to identify conditions which favored the disassembly of VLPs into smaller, soluble components.

100-200 pl reaction mixtures containing VLPs (50-100 pg total protein) plus or minus potential disrupting agents were layered atop 5 ml centrifuge tubes filled with 4.8 ml of 30% sucrose (w/w in PBS-0.5M NaCl) and centrifuged at 197,000 x g for 2 hours at 40 C in a swinging bucket rotor.

A 50 p1 aliquot was taken from the very top of the tube, and mixed with 2X Laemmli sample preparation buffer (Laemmli, Nature, 227:680-685 (1970). The remainder of the 30% sucrose cushion was removed by pipet, and the "pellet" (typically none was visible) was resuspended in WO 99/01557 PCT/US98/13799 100 p1 of IX Laemmli sample preparation buffer. The presence of HPV-11 L1 protein at the top or bottom of the sucrose cushion was then determined by SDS/PAGE, and the relative amount of L1 quantified by analysis of digitized gels. Second, the state of disassembled VLPs was determined by rate-zonal centrifugation through 5-20% linear sucrose gradients. Disassembled VLPs (100-200 pg total protein in 400 ml) were layered atop preformed 11.6 ml gradients composed of 5-20% sucrose (w/v in NaC1), and centrifuged at 111,000 x g for 24 hours at 40 C in a swinging bucket rotor. Fractions (0.5 ml) were collected across the gradient, and the "pellet" (typically none was visible) was resuspended in 0.5 ml of PBS by dounce homogenization. The position of HPV-11 L1 protein across the gradient was determined by immunoblotting. The gradients were calibrated using standard proteins with established sedimentation coefficients coli 3-galactosidase, 19 S; catalase, 11.3 S; bovine serum albumin, 4.3 and the percentage of sucrose in the fractions was determined by refractometry.

Third, the state of initial, disassembled, and reassembled VLPs was determined by rate-zonal centrifugation WO 99/01557 PCT/US98/13799 -51through 10-65% linear sucrose gradients. HPV-11 L1 protein (100-200 Ag total protein in 400 il) in various states of assembly was layered atop preformed 11.6 ml gradients composed of 10-65% sucrose (w/v in PBS-0.5M NaC1), and centrifuged at 188,000 x g for 2.5 hours at 40 C in a swinging bucket rotor. The gradients were collected (in ml fractions), analyzed, and calibrated as above, with parvovirus B19 (70 S) and HPV-18 L1 VLPs (160 S) used as additional calibration standards.

Gel Electrophoresis SDS/PAGE SDS/PAGE was performed largely according to the method of Laemmli, Nature, 227:680-685 (1970). Samples were mixed with sample preparation buffer, boiled for 2 minutes, briefly spun in a minifuge, and loaded onto 7.5% (Fig. 1) or 10% (Figs. 2-4) minigels with a 4% stacking gel. Gels were run for approximately 1 hour at 20 mA constant current at room temperature, and protein was visualized by staining with Coomassie brilliant blue R250.

Immunoblotting Electroblots of HPV-11 L1 from SDS/PAGE gels were prepared largely according to the method of Towbin et al., Proc. Natl. Acad. Sci. USA, 76:4350-4354 (1979). The blots WO 99/01557 PCT/US98/13799 -52were blocked with 1% nonfat milk protein in PBS overnight at 40 C. The blots were probed with AU1, a mouse monoclonal directed against a linear epitope on papillomavirus L1 proteins (Lim et al., J. Infect. Dis., 162:1263-1269 (1990) for 90 minutes, washed with PBS, 0.1% Tween-80, and then reblocked for 30 minutes. The blots were then incubated with HRP-labeled goat anti-mouse IgG (Southern Biotechnology Associates, Inc.) for 40 minutes, and washed as above. The blots were then developed with ECL Western blotting reagent, and exposed to X-ray film.

Analysis of gels The Mr of monomeric and oligomeric L1 were determined from their Rf values on 7.5% SDS/PAGE, in comparison to standard proteins (See and Jackowski, In T. E. Creighton (ed) Protein structure: a practical approach, IRL Press, NY, pp 1-21, (1989). When indicated, gels and immunoblots were digitized on a Hewlett Packard Scanjet Plus flatbed densitometer, and the relative intensity of bands was determined using Scan Analysis software (Version 2.2; Specom Research).

Electron microscopy WO 99/01557 PCT/US98/13799 -53- Protein samples were allowed to settle on formvar and carbon-coated copper grids, blotted dry, and stained with freshly-filtered 2% phosphotungstic acid (pH Grids were examined in a JEOL model 1005 transmission electron microscope at an accelerating voltage of 100 KV and photographed at nominal magnifications of 15-25,000x.

Enzyme-linked immunosorbent assay (ELISA) HPV-11 L1 VLPs (0.5 1.0 mg/ml L1) in PBS-0.3 M NaC1 were either stored without treatment at 4 0 C, or incubated overnight at 4 0 C following addition of 3ME (to a final concentration of or 2.0 M carbonate-buffer, pH 9.6 (to a final concentration of 200 mM carbonate). A portion of the treated samples were then dialyzed against 4 x 1L PBS-0.5 M NaC1 at 4 0 C for about 24 hrs. All samples were diluted to a concentration of 0.8 pg Ll/ml and distributed into the wells of microtiter plates (80 ng L1 per well). Untreated VLPs and dialyzed material were diluted into PBS. Sample treated with 3ME without subsequent dialysis was diluted into PBS containing 5% 3ME, and undialyzed sample incubated in 200 mM carbonate was diluted into 200 mM carbonate, pH 9.6. Following incubation at 370 C for 1 hr, the plates were washed with PBS containing WO 99/01557 PCT/US98/13799 -54- 0.1% Tween 20 (PBS-Tw) and blocked with 5% nonfat milk protein in PBS. Monoclonal antibodies were diluted in 1% nonfat milk in PBS and added to the wells. Following a 1 hr incubation at room temperature, the plates were washed with PBS-Tw and HRP-labeled goat anti-mouse IgG (Gibco/BRL) was added. After 1 hr at room temperature, the plates were washed as above and developed with HRP substrate. Optical density measurements were made at 405 nm at the 15 min end-point. Averages of duplicate wells were calculated as the final optical density values.

EXAMPLE 1 Quantitative disassembly of HPV-11 VLPs Relatively large quantities of HPV-11 L1 VLPs were prepared as starting material for the study of VLP disassembly and reassembly. HPV-11 L1 VLPs were isolated from recombinant baculovirus-infected High Five, cells by CsCl and sucrose gradient centrifugation. The calculated purity of these L1 preparations, based on densitometric analysis of SDS/PAGE, ranged between 70-90% (see Fig. 1, lane In addition, in linear sucrose gradients most of the protein migrated as expected for a mixture of individ- WO 99/01557 PCT/US98/13799 ual and clumped VLPs (Fig. 4a), and in the electron microscope a mixture of intermediate and full-size (50-55 nm) particles were apparent (Fig. The covalent and non-covalent interactions which stabilize the assembled L1 VLPs are not entirely known, but earlier work on papillomavirus VLPs and related polyomavirus virions and VLPs suggested the importance of ionic strength, divalent cations (Brady et al, J. Virol., 23:717-724 (1977); Salunke et al, Biophys. 56:887-900 (1987), and disulfide bonds (Sapp et al, J. Gen. Virol., 76:2407-2512 (1995); Volpers et al, Virology, 200:504-512 (1994). In particular, Sapp and co-workers had demonstrated by immunoblotting that -50 percent of the L1 protein of HPV-33 VLPs was disulfide-bonded into a range of larger oligomers with an apparent Mr consistent with trimers of L1, and that mild reducing conditions partially broke down HPV-33 VLPs to the level of capsomeres (Sapp et al, J. Gen. Virol., 76:2407-2412 (1995); Volpers et al, Virol., 200:504-512 (1994). In our studies, in the absence of reducing agents only a portion of the HPV-11 L1 protein migrated on SDS/PAGE with an apparent Mr of 55,000 Da (Fig. 1, Lane Approximately 40% (the percentage WO 99/01557 PCT/US98/13799 varied between different VLP preparations) of the L1 protein of HPV-11 VLPs was disulfide-bonded into. larger oligomers (Fig. 1, Lane with predicted Mr values of approximately 144,000 Da (possibly L1 trimer) and 210,000 Da (possibly L1 tetramer). The L1 oligomers did not migrate as a single band, and appeared to be heterogeneous in size. The -200,000 Da oligomer was also observed on immunoblots by Sapp and coworkers (Sapp et al, J. Gen.

Virol., 76:2407-2412 (1995); Volpers et al, Virol., 200:504-512 (1994), as part of a broad higher molecular weight band. These results indicate that a portion of the L1 proteins in HPV-11 VLPs are disulfide-linked into higher oligomers. To study the role of disulfide linkages and other interactions in VLP stability, a rapid screening assay for VLP disassembly was developed. Purified HPV-11 L1 VLPs, both before and after various treatments, were layered atop 30% sucrose cushions, centrifuged, and the distribution of L1 protein at the top and bottom of the cushion was visualized by SDS/PAGE. Intact VLPs were expected to pellet through the 30% sucrose cushion; non-aggregated capsomeres and L1 monomer were expected to remain on the top of the cushion. An example of this WO 99/01557 PCT/US98/13799 -57assay is shown in Fig. 2. To quantitate the relative disposition-of L! protein, the gels were digitized, the total intensity-of the L1 bands at the top and the bottom of the cushion was determined, and then the percentage of the L1 staining intensity found at either position was calculated. The results of a number of such determinations are tabulated in Tables 1 and 2. As demonstrated in Fig. 2, the purified VLP starting material sedimented through the 30% sucrose, as predicted, with no L1 apparent at the top. However, upon incubation with a high concentration of the reducing agent P-mercaptoethanol (PME), L1 protein was found largely at the top of the 30% sucrose cushion, indicating that the reducing agent had disassembled the HPV-11 VLPs to smaller, non-aggregated components. Interestingly, maximal disassembly of the VLPs typically required exposure to a very high concentration of reducing agent (in this instance or 713 mM, 3ME) for a relatively long duration (-16 hours at 40 Lower concentrations of reducing agent or shorter durations of reduction were not as reliably effective at VLP disassembly. Addition of a low concentration of a chelating agent did not enhance disassembly (Fig. 2 and Table 1) WO 99/01557 PCT/US98/13799 -58- In addition to reductants, the other important variables for quantitative disassembly of VLPs were found to be the ionic strength during the disassembly reaction and the solubility of the VLP starting material. As observed earlier for polyomavirus virions, lower ionic strength conditions destabilize VLPs (Brady et al, J. Virol., 23:717-724 (1977), although Sapp et al, J. Gen. Virol., 76:2407-2412 (1996) reported that generation of HPV-33 capsomeres from VLPs was insensitive to salt concentration between 0.15M and 0.6 M NaCl. For HPV-11 VLPs, maximum disassembly of VLPs exposed to 5% PME for 16 hours was observed at "physiological" ionic strength 0.15 M NaCi), but became correspondingly less effective as the ionic strength was increased (Table The stabilizing effect of increased ionic strength could be partially overcome by incubating the VLPs with reducing agents for longer durations or at elevated temperatures. However, while incubating the VLPs with 5% 3ME for 120 hours at C, or for 24 hours at 240 C increased the extent of disassembly to 60-70% at 0.5 M NaCl, disassembly was still far from complete (data not shown). Furthermore, for quantitative disassembly, the degree of aggregation of the VLP WO 99/01557 PCT/US98/13799 -59starting material was also important. In the experiments reported here, the VLP solutions were dialyzed into different ionic strength buffers and stored at 49 C until use in disassembly trials. After several days, particularly at 0.15 M NaCl, the solutions became slightly cloudy, indicating some degree of aggregation (although little or no precipitate was observed). Treatment of the clouded VLP solutions with reducing agents did not yield the same degree of disassembly as was observed with the initial soluble VLP solution, indicating that the aggregated VLPs were resistant to disassembly. However, upon removal of the aggregated material (which ranged from 10-50% of the total VLPs depending on the age of the preparation) by filtration, the remaining soluble VLPs again could be disassembled to the same extent as the initial soluble VLP starting material.

Interestingly, even at high concentrations of chelators, chelation of cations did not significantly influence VLP disassembly. Dialysis of VLPs into 200 mM EDTA or EGTA buffers (PBS-0.3 M NaCi, pH 7.4) led to no apparent disassembly, and the addition of 10 mM dithiothreitol (DTT) to the dialysis buffers had little effect WO 99/01557 PCT/US98/13799 (Table The inability of high concentrations of chelators to disassemble VLPs was confirmed by electron microscopic analysis, although EDTA (but not EGTA) appeared to swell the VLPs slightly (data not shown). Either these concentrations of chelator are insufficient to extract tightly bound, structurally-important ions, or cations are not essential to maintaining VLP structural integrity.

Conversely, addition of a concentrated aliquot of NaHCO 3 buffer (pH 9.6) to a solution of VLPs, to a final concentration of 200 mM carbonate (in PBS-0.3 M NaCl), caused significant breakdown of the VLPs (Table Addition of DTT (to a final concentration of 10 mM), did not further enhance carbonate-induced breakdown. Incubation of VLPs with 200 mM carbonate/10 mM DTT is commonly used to denature HPV virions or VLPs in ELISAs (Favre et al, J.

Virol., 15:1239-1237 (1975); Christensen and Kreider, J.

Virol., 64:3151-3156 (1990); Christensen et al, J. Gen.

Virol., 75:2271-2276 (1994). The effect of carbonate appears to be buffer specific, and not merely a function of pH, as incubation of HPV-11 VLPs with pH 9.6 glycine buffer (200 mM final concentration) caused very little VLP breakdown, as measured by the 30% sucrose cushion assay WO 99/01557 PCT/US98/13799 -61- (Table Similarly, Brady et al, J. Virol., 23:717-724 (1977), observed that carbonate buffer at alkaline pH, but not alkaline pH alone, dissociated polyomavirus virions.

However, the specific effect of carbonate at pH 9.6 does not appear to be due to carbonate's potential chelating ability, as suggested by Brady et al, J. Virol., 23:717- 724 (1977), as 200 mM EDTA at pH 9.6 10 mM DTT) was completely ineffective at VLP disassembly (data not shown).

EXAMPLE 2 Characterization of disassembled VLPs Following long-term exposure to high concentrations of reducing agent, the purified VLPs appear to be broken down to the level of capsomeres. As shown in Fig. 3a, the disassembled VLPs generated by incubation with 5% 3ME for 16 hours at 40 C migrated on 5-20% linear sucrose gradients with an average sedimentation coefficient of 11.3 1.5 S (n determined relative to sedimentation standards.

Larger species, with a calculated sedimentation coefficient of 16-18 S (perhaps dimeric capsomeres), and even pelleted materials were occasionally observed. However, WO 99/01557 PCT/US98/13799 -62less than 10% of the L1 was detected at the top of the gradient (expected position for L1 monomer) or in the pellet (expected position for intact VLPs or aggregated capsomeres), suggesting that the purified VLP starting material was largely disassembled to the level of individual capsomeres upon prolonged reduction. This conclusion is supported by electron microscopic analysis of VLPs following prolonged incubation with 5% 3ME, which depicted a field of homogeneous capsomeres (Fig. 5b) averaging 9.7+1.2 nm (n 15) in diameter, with occasionally a few larger aggregated structures apparent (monomeric L1 would not be detected with this technique). The estimated capsomere diameter is slightly smaller than that observed by cryoelectronmicroscopy (11-12 nm) (Baker et al, Biophys.

1991; Hagensee et al, J. Virol., 68:4503-4505, (1994); Belnap et al, J. Mol. Biol., 259:249-263 (1996), perhaps due to shrinkage during electron microscope grid preparation. The data demonstrated in Figs. 3a and 5b indicate that prolonged exposure to high concentrations of reductants quantitatively disassembles purified, soluble VLPs to a homogenous population of capsomeres.

WO 99/01557 PCT/US98/13799 -63- Capsomeres generated from HPV-11 VLPs upon long term exposure to high concentrations of reducing agent contain structural epitopes found on intact VLPs. A panel of HPV-ll-specific monoclonal antibodies has been described which react with intact HPV-11 L1 VLPs but not with "denatured" L1. These monoclonals include H11.F1, which has been demonstrated to recognize a dominant neutralizing epitope on HPV-11 virions, and H11.A3, a distinct non-neutralizing structure-dependent antibody (Christensen and Kreider, J. Virol., 64:3151-3156 (1990); Christensen et al, J. Virol., 64:5678-5681 (1990). As anticipated, H11.F1 and H11.A3 reacted strongly with the purified HPV-11 VLP starting material when analyzed by ELISA (Fig.

6a). However, these antibodies also reacted with capsomeres generated from the VLP starting material by exposure to reducing agent (Fig. 6b). Thus, capsomeres possess at least some of the structure-dependent epitopes found on the surface of intact VLPs and authentic virions, in agreement with studies performed by Li et al, J. Virol., 71:2988-2995 (1997) on HPV-11 capsomeres expressed in E.

coli. These results further demonstrate that monoclonal antibodies H11.F1 and H11.A3, while requiring a "native- WO 99/01557 PCT/US98/13799 -64like" conformation for binding, are not VLP-dependent as has been previously described (Ludmerer et al, J. Virol., 71:3834-3839 (1997)).

In contrast, monoclonal antibodies H11.F1 and H11.A3 fail to recognize HPV 11 VLPs dissociated by treatment with carbonate buffer at pH 9.6 (data not shown; Christensen et al, J. Gen. Virol., 75:2271-2275 (1994) Carbonate treatment did not lead to a homogeneous solution of capsomeres, but instead appeared as an indistinct mixture of small objects, partially aggregated, when examined by electron microscopy (data not shown). This view was partially confirmed by analysis of carbonatetreated VLPs on 5-20% linear sucrose gradients, in which the L1 protein largely migrated at -4 S, although a small population at 9-11 S was observed (Fig. 3b), in agreement with the effects of carbonate buffer (at pH 10.6, with mM DTT) upon BPV virions (Favre et al, J. Virol., 15:1239- 1247 (1975)). Finally, while treatment with glycine buffer at pH 9.6 did not dissociate VLPs to smaller, individual particles (Table it did have some effect.

VLPs treated with pH 9.6 glycine appeared in the electron microscope as a poorly-defined mixture of intact, and WO99/01557 PCT/US98/13799 partially-broken down and aggregated VLPs (data not shown).

EXAMPLE 3 Use of Isolated HPV-11 Ll Capsomeres to Produce Induce Virus-Neutralizing Antibodies Purified L1 capsomeres were used to produce polyclonal antisera in rabbits, and three-fold serial dilutions of these antisera along with antisera raised previously against recombinant HPV-11, 16 and 18 capsids, where tested against intact capsids of HPV types 11, 16 and 18.

HPV-11 capsomere-specific and capsid-specific polyclonal antisera were each equally immunoreactive with intact HPV- 11 capsids at all dilutions tested but did not react with HPV-16 or HPV-18 capsids. These results are consistent with previous observations made using HPV-11, 16 and 18 capsid-specific polyclonal antisera (Rose et al, J. Gen.

Virol., 75:2445-2449 (1994)), indicating that HPV-11 isolated L1 capsomeres are highly immunogenic and retain genotype-restricted antigenicity exhibited by intact L1 capsids and native HPV virions. When tested in an in vitro neutralization assay involving infectious HPV-11 WO 99/01557 PCT/US98/13799 -66virions, post-immune HPV-11 L1 capsomere-specific polyclonal antisera exhibited a neutralization titer of 10 5 6 which is comparable to that obtained with an antiserum raised against intact HPV-11 virions in vivo (Rose et al, J. Gen. Virol., Pre-immune sera from rabbits immunized with isolated L1 capsomeres exhibited no virusneutralizing activity, nor did a polyclonal antiserum raised previously against HPV-16 capsids. Thus, isolated HPV-11 capsomeres display a highly immunogenic, genotyperestricted capsid neutralizing antigenic domain of HPV-11 virions and intact capsids, and should be a useful immunogen for the prevention of genital HPV disease.

TABLE 1 Disassembly of HPV-11 L1 VLPs'; Effects of reducing agentsa Disassembly Condition 0.15 M NaCI 0.3 m NaCI 0.5 M NaCI Top Bottom Top Bottom Top Bottom Starting Material 3.8±0.7 96.3±0.8 3.2±1.4 96.8±1.4 4.2±0.3.4 95.9±0.6 BME, 16 hr 87.7±3.2 12.4±3.1 70.9±12 29.1±12 53.2±6.8 46.8+6.8 BME, 1 hr 68.1±11 31.9±11 68.0±10 32±10 2% BME, 16 hr 72.1±2.7 27.9±2.7 67.6±21 32.3±612 0.5% 1ME, 16hr 45.8±18 54.2±16 28.8±16 71.2±16 mM DTT, 16hr 44.5±11 55.5±11 43.8±20 56.2±20 mM DTT, 1 hr 9.5±6.4 90.5±6.4 WO 99/01557 WO 9901557PCTIUS98/13799 -67- E lOmM DTr, 5mM 55.9±6.2 144.1± 6.21 EDTA, 16 hr II aV7TPs (0.5-1.0 mg/mi protein) were treated as indicat ed-at 4*C, and the distribution of LI across a 30% sucrose cushion was determined as described in the Methods section. Shown are the means-of multiple determinations the standard deviation.

TABLE 2 Disassembly of HPV-i1 LI VLPs; Effects of chelators and buf fersa Disassembly Condition TOP Bottom 200 mM EDTA, pH 7.4 4±3 96±3 200 mM EDTA, 10mM DTT 10±6 90±6 200 mM EGTA, pH 7.4 13±11 87±11 200niM EGTA, 10,M D1T 11±6 89±6 200 mM NaHCQ3, pH 9.6 81±2 19±2 200 mM NaHCO3, 10mM DTT 74±11 26±11 200 mM glycne, pH 9.6 11±1 89±1 200 mM glycine, 10niM DIT 41±12 59±11 aVLPs,(0.5-1.0 mg/mi protein) were treated as indicated for 16 hours at 4'C, and the distribution of Li across of 30% sucrose cushion was determined as described in the WO 99/01557 PCT/US98/13799 -68- Methods section. Shown are the averages of duplicate determinations the range.

The invention may be embodied in other specific forms without departing from its spirit or essential characteristics. The described embodiments are tobe considered in all respects only as illustrative and not restrictive, and the scope of the invention is, therefore, indicated by the appended claims rather than by the foregoing description.

All modifications which come within the meaning and range of the lawful equivalency of the claims are to be embraced within that scope.

Claims (4)

1. 31-10-02:14:25 ;WATERMARK PATENT .61 3 98196010 6/ 1 7 69 THE CLAIMS DEFINING THE INVENTION ARE AS FOLLOWS: 1. Stable human papillomavirus (HPV) capsomeres, with the proviso that said human papillomavirus (HPV) capsomeres are not HPV-11 capsomeres, which are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein; (ii) present at least one virus-neutralizing conformational epitope of the major capsid protein (L1) expressed by a native (wild-type infectious) HPV virus; and (iii) induce the production of HPV neutralizing antibodies. 2. The stable HPV capsomeres of claim 1, which are selected from the group consisting of HPV-6, HPV-16, HPV-18, HPV-30, HPV-31, HPV-33, HPV-35, HPV- 39, HPV-42, HPV-43, HPV-44, HPV-45, HPV-51, HPV-52, HPV-54, HPV-56 and HPV-70 capsomeres. 3. The stable capsomeres of claim 1, wherein said stable HPV capsomeres are produced by expression of a modified HPV L1 DNA which comprises a carboxyl-terminal deletion which inhibits or prevents VLP assembly. 4. The stable capsomeres of claim 3, wherein said carboxyl-terminal deletion results in the deletion of at least 30 amino acids of the carboxyl-terminal portion of the L1 protein. The stable capsomeres of claims 3 or 4, wherein said modified HPV Li DNA upon expression results in an L1 protein lacking from about 30 amino acids to about 86 amino acids of the carboxyl-terminal portion of the L1 protein. 6. The stable capsomeres of any one of claims 3 to 5, wherein said HPV L1 DNA further comprises at least one addition, substitution or deletion modification which inhibits or prevents disulfide bond formation. 31-10-02:14:25 ;WATERMARK PATENT ;61 3 98196010 7/ 17 7. The stable capsomeres of claim 6, wherein the modification comprises the deletion and/or substitution of at least one cysteine codon. 8. The stable capsomeres of claim 7, wherein at least one of said cysteine residue(s) is comprised in the region of the L1 protein spanning about residues to 86, inclusive, relative to the carboxy terminal end of the L1 protein. 9. The stable capsomeres of claim 1, wherein said capsomeres are produced by the expression of an HPV L1 DNA which has been modified to introduce a mutation which inhibits capsomere-capsomere disulfide bond formation. The stable capsomeres of claim 9, wherein said modification comprises the deletion and/or substitution of at least one cysteine codon. 11. The stable capsomeres of claim 1, wherein said HPV capsomeres induce the production of neutralizing antibodies in a human. 12. The stable capsomeres of claim 11, wherein said HPV capsomeres are selected from the group consisting of HPV-6, HPV-16, HPV-18, HPV-30, HPV-31, HPV-33, HPV-35, HPV-39, HPV-42, HPV-43, HPV-44, HPV-45, HPV-51, HPV-52, HPV-54, HPV-55, HPV-56 and HPV-70 capsomeres. 13. A vaccine for conferring protection against HPV which comprises an amount of the stable HPV capsomeres of claim 1 sufficient to confer protection to said HPV upon challenge and a pharmaceutically acceptable carrier. 14. The vaccine of claim 13, wherein said composition consists essentially of said stable HPV capsomeres. The vaccine of claims 13 or 14, wherein said stable HPV capsomeres are produced by expression of an HPV L1 DNA containing a modification which upon expression results in stable HPV capsomeres that are substantially incapable of .ssembly into virus-like particles. 31-10-02;14:25 ;WATERMARK PATENT ;61 3 98196010 S/ 17 71 16. The vaccine of claim 15, wherein said modification results in the deletion of at least the 30 carboxyl-terminal amino acids of the HPV L1 protein and/or deletion, addition or substitution modification which inhibits or prevents formation of a disulfide bond involved in VLP assembly. 17. The vaccine of claim 16, wherein said modification comprises the deletion and/or substitution of at least one cysteine residue. 18. The vaccine of claims 13 or 14, wherein the stable HPV capsomeres contained therein are selected from the group consisting of HPV-6, HPV-16 and HPV-18 capsomeres, or a mixture thereof. 19. The vaccine of claims 13 or 14, wherein said stable HPV capsomeres are produced by trypsin digestion of HPV virus-like particles or capsomeres, or by treatment with a compound that inhibits the oxidation of reactive sulfhydryls. A method of conferring protection to HPV infection in a susceptible host comprising administering a prophylactically effective amount of stable human capsomeres which are selected from the group consisting of HPV-6, HPV-16, HPV-18, HPV-30, HPV-31, HPV-33, HPV-35, HPV-39, HPV-42, HPV-43, HPV-44, HPV-51, HPV-52, HPV-54, HPV-55, HPV-56 and HPV-70, and mixtures thereof, which are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein; (ii) present at least one virus-neutralizing conformational epitope of the major capsid protein (L1) expressed by a native (wild-type infectious) HPV virus; and (iii) induce the production of HPV neutralizing antibodies. 21. The method of claim 20, wherein said stable capsomeres contain a carboxyl-terminal deletion which removes at least 30 amino acids of the carboxy- rlminal portion of the L1 protein. 31-10-02:14:25 :WATERMARK PATENT ;61 3 98196010 9/ 17 72 22. The method of claim 21, wherein said stable capsomeres lack from about to 86 amino acids of said HPV L1 protein. 23. The method of claim 20, wherein said stable HPV capsomeres are produced by expression of an HPV L1 DNA which has been modified to inhibit either directly or indirectly capsomere-capsomere disulfide bond formation. 24. The method of claim 23, wherein the modification comprises the deletion and/or substitution of at least one cysteine codon. A diagnostic composition comprising a diagnostically effective amount of stable human papillomavirus capsomeres according to claim 1. 26. The diagnostic composition of claim 25, wherein said capsomeres are directly or indirectly attached to a moiety that provides for detection. 27. An HPV L1 DNA other than an HPV-11 L1 DNA that contains a modification such that upon expression it results in the production of stable HPV capsomeres which are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein and which present at least one virus-neutralizing conformational epitope expressed by a native HPV virion. 28. The HPV L1 DNA of claim 27, which comprises a modification which inhibits or prevents the formation of at least one disulfide bond involved in the VLP assembly. 29. The HPV L1 DNA of claim 28, wherein said modification comprises the substitution or deletion of at least one cysteine residue. The HPV L1 DNA of claim 29, which further comprises a carboxyl terminal deletion which inhibits the formation of virus-like particles. 31-10-02;14:25 ;WATERMARK PATENT ;61 3 98196010 10/ 17 73 31. The HPV L1 DNA of claim 30, wherein said carboxyl-terminal deletion results in the elimination of at least 30 amino acids of the L1 protein.
2. 32. The HPV L1 DNA of claim 31, wherein said carboxyl-terminal deletion results in the elimination of from about 30 to 86 amino acids of the L1 protein.
3. 33. Use of stable HPV capsomeres as claimed in any one of claims 1 to 12 for the preparation of a medicament for the prophylaxis and/or treatment of HPV infection.
4. 34. Stable modified human papillomavirus (HPV) capsomeres which are selected from the group consisting of HPV-6, HPV-16, HPV-18, HPV-30, HPV-31, HPV-33, HPV-35, HPV-39, HPV-42, HPV-43, HPV-44, HPV-45, HPV-51, HPV-52, HPV-54, HPV-55, HPV-56 and HPV-70, and mixtures thereof, which are modified such that the modifications inhibit VLP formation by at least 50% relative to a corresponding non-modified HPV L1 protein; (ii) present at least one virus-neutralizing conformational epitope of the major capsid protein (L1) expressed by a native (wild-type infectious) HPV virus; and (iii) induce the production of HPV neutralizing antibodies. DATED this 3 1 st day of October, 2002 UNIVERSITY OF COLORADO, UNIVERSITY TECHNOLOGY CORPORATION. UNIVERSITY OF ROCHESTER MEDIMMUNE, INC. WATERMARK PATENT TRADEMARK ATTORNEYS 290 BURWOOD ROAD HAWTHORN VICTORIA 3122 AUSTRALIA s e: P17056AU00 CJS/MCQ/AMT/SIG 0UFS