AU2008200070A1 - Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases - Google Patents
Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases Download PDFInfo
- Publication number
- AU2008200070A1 AU2008200070A1 AU2008200070A AU2008200070A AU2008200070A1 AU 2008200070 A1 AU2008200070 A1 AU 2008200070A1 AU 2008200070 A AU2008200070 A AU 2008200070A AU 2008200070 A AU2008200070 A AU 2008200070A AU 2008200070 A1 AU2008200070 A1 AU 2008200070A1
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- Australia
- Prior art keywords
- substituted
- phenyl
- dna
- homo sapiens
- unsubstituted
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
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- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 title description 29
- 201000010099 disease Diseases 0.000 title description 24
- 206010028980 Neoplasm Diseases 0.000 title description 17
- 102000043136 MAP kinase family Human genes 0.000 title description 15
- 108091054455 MAP kinase family Proteins 0.000 title description 15
- 201000011510 cancer Diseases 0.000 title description 5
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- 239000010452 phosphate Substances 0.000 description 1
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- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 description 1
- 150000003003 phosphines Chemical class 0.000 description 1
- ABLZXFCXXLZCGV-UHFFFAOYSA-N phosphonic acid group Chemical group P(O)(O)=O ABLZXFCXXLZCGV-UHFFFAOYSA-N 0.000 description 1
- 150000003013 phosphoric acid derivatives Chemical class 0.000 description 1
- OJMIONKXNSYLSR-UHFFFAOYSA-N phosphorous acid Chemical class OP(O)O OJMIONKXNSYLSR-UHFFFAOYSA-N 0.000 description 1
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- BZQFBWGGLXLEPQ-REOHCLBHSA-N phosphoserine Chemical compound OC(=O)[C@@H](N)COP(O)(O)=O BZQFBWGGLXLEPQ-REOHCLBHSA-N 0.000 description 1
- 238000006303 photolysis reaction Methods 0.000 description 1
- 230000015843 photosynthesis, light reaction Effects 0.000 description 1
- XNGIFLGASWRNHJ-UHFFFAOYSA-L phthalate(2-) Chemical compound [O-]C(=O)C1=CC=CC=C1C([O-])=O XNGIFLGASWRNHJ-UHFFFAOYSA-L 0.000 description 1
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- 230000004962 physiological condition Effects 0.000 description 1
- OXNIZHLAWKMVMX-UHFFFAOYSA-N picric acid Chemical class OC1=C([N+]([O-])=O)C=C([N+]([O-])=O)C=C1[N+]([O-])=O OXNIZHLAWKMVMX-UHFFFAOYSA-N 0.000 description 1
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- 229920000768 polyamine Polymers 0.000 description 1
- 238000003752 polymerase chain reaction Methods 0.000 description 1
- NNFCIKHAZHQZJG-UHFFFAOYSA-N potassium cyanide Chemical compound [K+].N#[C-] NNFCIKHAZHQZJG-UHFFFAOYSA-N 0.000 description 1
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- XOFYZVNMUHMLCC-ZPOLXVRWSA-N prednisone Chemical compound O=C1C=C[C@]2(C)[C@H]3C(=O)C[C@](C)([C@@](CC4)(O)C(=O)CO)[C@@H]4[C@@H]3CCC2=C1 XOFYZVNMUHMLCC-ZPOLXVRWSA-N 0.000 description 1
- 102000004196 processed proteins & peptides Human genes 0.000 description 1
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- 235000018102 proteins Nutrition 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 239000001944 prunus armeniaca kernel oil Substances 0.000 description 1
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- 125000000561 purinyl group Chemical group N1=C(N=C2N=CNC2=C1)* 0.000 description 1
- 125000004309 pyranyl group Chemical group O1C(C=CC=C1)* 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- 125000002098 pyridazinyl group Chemical group 0.000 description 1
- BGUWFUQJCDRPTL-UHFFFAOYSA-N pyridine-4-carbaldehyde Chemical compound O=CC1=CC=NC=C1 BGUWFUQJCDRPTL-UHFFFAOYSA-N 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
- 229940107700 pyruvic acid Drugs 0.000 description 1
- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 description 1
- IUVKMZGDUIUOCP-BTNSXGMBSA-N quinbolone Chemical compound O([C@H]1CC[C@H]2[C@H]3[C@@H]([C@]4(C=CC(=O)C=C4CC3)C)CC[C@@]21C)C1=CCCC1 IUVKMZGDUIUOCP-BTNSXGMBSA-N 0.000 description 1
- 125000005493 quinolyl group Chemical group 0.000 description 1
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 description 1
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- RMAQACBXLXPBSY-UHFFFAOYSA-N silicic acid Chemical compound O[Si](O)(O)O RMAQACBXLXPBSY-UHFFFAOYSA-N 0.000 description 1
- 235000012239 silicon dioxide Nutrition 0.000 description 1
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- 229910052708 sodium Inorganic materials 0.000 description 1
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- 235000002639 sodium chloride Nutrition 0.000 description 1
- BEOOHQFXGBMRKU-UHFFFAOYSA-N sodium cyanoborohydride Chemical compound [Na+].[B-]C#N BEOOHQFXGBMRKU-UHFFFAOYSA-N 0.000 description 1
- 229910001495 sodium tetrafluoroborate Inorganic materials 0.000 description 1
- HAEPBEMBOAIUPN-UHFFFAOYSA-L sodium tetrathionate Chemical compound O.O.[Na+].[Na+].[O-]S(=O)(=O)SSS([O-])(=O)=O HAEPBEMBOAIUPN-UHFFFAOYSA-L 0.000 description 1
- 239000007901 soft capsule Substances 0.000 description 1
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- IIACRCGMVDHOTQ-UHFFFAOYSA-N sulfamic acid group Chemical class S(N)(O)(=O)=O IIACRCGMVDHOTQ-UHFFFAOYSA-N 0.000 description 1
- 125000000446 sulfanediyl group Chemical group *S* 0.000 description 1
- 125000000475 sulfinyl group Chemical group [*:2]S([*:1])=O 0.000 description 1
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- 150000003512 tertiary amines Chemical class 0.000 description 1
- TUNFSRHWOTWDNC-HKGQFRNVSA-N tetradecanoic acid Chemical compound CCCCCCCCCCCCC[14C](O)=O TUNFSRHWOTWDNC-HKGQFRNVSA-N 0.000 description 1
- 125000000383 tetramethylene group Chemical group [H]C([H])([*:1])C([H])([H])C([H])([H])C([H])([H])[*:2] 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- 125000004627 thianthrenyl group Chemical group C1(=CC=CC=2SC3=CC=CC=C3SC12)* 0.000 description 1
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- 150000003626 triacylglycerols Chemical class 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical class [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 1
- PNQBEPDZQUOCNY-UHFFFAOYSA-N trifluoroacetyl chloride Chemical compound FC(F)(F)C(Cl)=O PNQBEPDZQUOCNY-UHFFFAOYSA-N 0.000 description 1
- UFTFJSFQGQCHQW-UHFFFAOYSA-N triformin Chemical compound O=COCC(OC=O)COC=O UFTFJSFQGQCHQW-UHFFFAOYSA-N 0.000 description 1
- 125000003258 trimethylene group Chemical group [H]C([H])([*:2])C([H])([H])C([H])([H])[*:1] 0.000 description 1
- 125000000026 trimethylsilyl group Chemical group [H]C([H])([H])[Si]([*])(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- PIEPQKCYPFFYMG-UHFFFAOYSA-N tris acetate Chemical compound CC(O)=O.OCC(N)(CO)CO PIEPQKCYPFFYMG-UHFFFAOYSA-N 0.000 description 1
- 230000002792 vascular Effects 0.000 description 1
- 235000015112 vegetable and seed oil Nutrition 0.000 description 1
- 239000008158 vegetable oil Substances 0.000 description 1
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- NCYCYZXNIZJOKI-UHFFFAOYSA-N vitamin A aldehyde Natural products O=CC=C(C)C=CC=C(C)C=CC1=C(C)CCCC1(C)C NCYCYZXNIZJOKI-UHFFFAOYSA-N 0.000 description 1
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Landscapes
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Description
L
r 00 c, 0 0
F-.
O 0 0 0 0
N
Australian Patents Act 1990 Regulation 3.2 ORIGINAL COMPLETE SPECIFICATION STANDARD PATENT Invention Title "Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases" The following statement is a full description of this invention, including the best method of performing it known to us:- Q:\OPER\MJC\30458138 new div 004 doc 00 -1- SUSE OF ISOQUINOLINE DERIVATIVES FOR TREATING CANCER AND MAP KINASE RELATED
DISEASES
O This application is a divisional of Australian Patent Application No. 2004218914, the 0 5 entire content of which is incorporated herein by reference.
N Summary SThe present invention relates to the discovery that certain compounds inhibit RAF kinase, a serine/threonine kinase that functions in the MAP kinase signaling pathway, and to the use of the compounds for the treatment of diseases characterized by excessive signaling in the MAP kinase signaling pathway, for example proliferative diseases like certain cancers.
Background Cells communicate various aspects of their extracellular environment to the nucleus by using various signal transduction pathways. Many of these signals are transmitted by protein kinases which activate various factors through the transfer of phosphate groups. Disruption of 1 signal transduction by inhibiting appropriate kinase activity can have a clinical benefit as has been demonstrated by imatinib, an inhibitor ofbcr-abl kinase, which is marketed as its mesylate salt under the brand GLEEVEC (in the United States) or GLIVEC.
The MAP kinase signaling pathway is known in the art as one of the pathways for growth factors to send their signal to proliferate from the extracellular environment to the cell nucleus. The growth factors activate transmembrane receptors located on the cell surface which in turn start a cascade whereby RAS is activated and recruits RAF kinase to the membrane where it is activated and in turn activates MEK kinase which then activates
ERK
kinase. Activated ERK kinase can move to the nucleus where it activates various gene transcription factors. Aberrations in this pathway can lead to altered gene transcription, cellular growth and contribute to tumorogenicity by negatively regulating apoptosis and transmitting proliferative and angiogenic signals. Inhibitors of RAF kinase have been shown to block signaling through the MAP kinase signaling pathway.
The RAF kinase family is known to have three members designated C-RAF, also known as RAF-1, B-RAF and A-RAF. Ii has been reported that B-RAF kinase is commonly activated by one of several somatic point mutations in human cancer, including 59% of the melanoma -2- Case 4-32905A/USN 00
O
C cell lines tested. See, Davies, H. et al, Nature 417, 949-954 (2002). Surprisingly, it has now been found that the compounds utilized in the method described herein are efficient inhibitors of RAF kinase, particularly C-RAF kinase and wild and mutated B-RAF kinases, particularly Sthe V599E mutant B-RAF kinase.
The compounds utilized in the present method of treatment are described, for example, in WO S00/94495, U.S. Published Application 2002-0010191 and WO 01/58899, which are here o, incorporated in their entirety by reference, as antiangiogenic agents due to their ability to Sinhibit vascular endothelial growth factor. However, these publications do not suggest that the isoquinoline compounds possess RAF kinase inhibiting properties and do not suggest that the compounds would have the therapeutic benefits associated with RAF kinase inhibiting properties.
The RAF kinase inhibiting property of the compounds makes them useful as therapeutic agents for the treatment for proliferative diseases characterized by an aberrant MAP kinase signaling pathway, particularly many cancers characterized by overexpression of RAF kinase or an activating mutation of RAF kinase, such as melanoma having mutated B-RAF, especially wherein the mutated B-RAF is the V599E mutant. The present invention also provides a method of treating other conditions characterized by an aberrant MAP kinase signaling pathway, particularly where B-RAF is mutated, for example benign Nevi moles having mutated B-RAF, with the compounds.
Description The present invention relates a method of treating a patient having a disease characterized by excessive signaling through the MAP kinase pathway, which comprises administering to the patient an effective RAF kinase inhibiting amount of a compound of formula (I) Case 4-32905A/USN 00 oO
O
A=B Z)m D-E
Q)
r Swherein r is from 0 to 2; 00oO Sn is from 0 to 2; CI m is from 0 to 4; A, B, D, E and T are each independently of the others N or CH, with the proviso that at least one, but not more than three, of A, B, D, E and T are N; G is lower alkylene, -CH 2
-CH
2
-CH
2
-SO
2 oxa thia or or is lower alkylene substituted by acyloxy, oxo, halogen or hydroxy.
Q is lower alkyl, especially methyl; R is H or lower alkyl; X is Y, oxa or thio; preferably -NH-; Y is H, unsubstituted or substituted lower alkyl, aryl, heteroaryl or unsubstituted or substituted cycloalkyl; and Z is amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, etherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenylsulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl or alkylphenylsulfonyl, and where, if more than one radical Z is present (m the substituents Z are identical or different; or an N-oxide or a pharmaceutically acceptable salt thereof.
The invention also relates to the use of a compound of formula I for the preparation of a medicament for the treatment of a disease characterized by excessive signaling through the MAP kinase signaling pathway.
-4- Case 4-32905A/USN 00 CI The patient is a mammal, generally a human, suffering from a disease that is characterized by excessive signaling through the MAP kinase pathway. This can be measured by activation state specific antibodies to pathway members by methods such as Western blot analysis or immunohistochemistry. Such methods are known to those of skill in the art.
In general, the disease characterized by excessive signaling through the MAP kinase signaling Spathway is a proliferative disease, particularly a cancer characterized by increased RAF 00 kinase activity, for example one which overexpresses wild-type B- or C-RAF kinase, or that Sexpresses an activating mutant RAF kinase, for example a mutant B-RAF kinase. Cancers wherein a mutated RAF kinase has been detected include melanoma, colorectal cancer, ovarian cancer, gliomas, adenocarcinomas, sarcomas, breast cancer and liver cancer. Mutated B-RAF kinase is especially prevalent in many melanomas.
In accordance with the present invention, a sample of diseased tissue is taken from the patient, for example, as a result of a biopsy or resection, and tested to determine whether the tissue produces a mutant RAF kinase, such as a mutant B-RAF kinase or overexpresses a wild-type RAF kinase, such as wild-type B- or C-RAF kinase. If the test indicates that mutant RAF kinase is produced or that a RAF kinase is overproduced in the diseased tissue, the patient is treated by administration of an effective RAF-inhibiting amount of a RAF inhibitor compound described herein.
Further in accordance with the invention is the use of a compound of formula I described herein for the preparation of a medicament for the treatment of melanoma which comprises comprises testing melanoma tissue from the patient to determine whether the melanoma tissue expresses mutant RAF kinase or overexpresses a wild-type RAF kinase and treating the patient if the melanoma tissue is found to overexpress a wild type RAF kinase or express an activating mutant B-RAF kinase with an effective RAF kinase inhibiting amount of a compound of formula I.
However, it is also possible to downregulate the MAP kinase signaling pathway with a RAF kinase inhibiting compound if another kinase in the cascade is the cause of excessive signaling in the pathway. Thus, the present invention further relates to the treatment of a Case 4-32905A/USN 00
O
CI disease characterized by excessive signaling in the MAP kinase signaling pathway attributed to a cause other than an activating mutation in or overexpression of a RAF kinase.
Tissue samples are tested by methods generally known in the art. For example, B-RAF mutations are detected by allele specific PCR, DHPLC, mass spectropscopy and overexpression of wild-type B- or C-RAF detected by immunohistochemistry, Simmunofluoresense, or Western blot analysis. A particularly useful method of detecting B- 00 RAF mutations is the polymerase chain reaction based method described in Example D1.
0O SSimilar methods are used to determine whether other kinases in the cascade are mutant or overexpressed.
stopt A particularly important aspect of this invention relates to a method of treating melanoma, which comprises testing melanoma tissue from a patient to determine whether the melanoma tissue expresses mutant RAF kinase or overexpresses a wild-type RAF kinase and treating the patient with an effective RAF kinase inhibiting amount of a RAFinhibiting compound described herein if the melanoma tissue is found to overexpress a wild type RAF kinase or express an activating mutant B-RAF kinase.
An important aspect of this embodiment relates to a method of treating melanoma, which comprises testing melanoma tissue from a patient to determine whether the melanoma tissue overexpresses B-RAF kinase or C-RAF kinase activity and treating the patient with an effective RAF kinase inhibiting amount of a RAF inhibiting compound described herein if the melanoma tissue is found to overexpress the B-RAF kinase or C-RAF kinase activity.
Another important aspect of this embodiment relates to a method of treating melanoma, which comprises testing melanoma tissue from a patient to determine whether the melanoma tissue expresses mutant B-RAF kinase and treating the patient with an effective RAF kinase inhibiting amount of a RAF inhibiting compound described herein if the melanoma tissue is found to express mutant B-RAF kinase.
Generally, the B-RAF kinase mutation is one of those described in the Davies et al article cited. These mutations are summarized in Table 1.
-6- Case 4-32905A/USN
O
0 00
O
O
0
(N
Table 1 B-RAF protein change mutation G1388A G463E G1388T G463V G1394C G465A G1394A G465E G1394T G465V G1403C G468A G1403A G468E G1753A E585K T1782G F594L G1783C G595R C1786G L596V T1787G L596R T1796A V599E TG1796- V599D 97AT Thus, the present invention particularly relates to a method of treating a disease characterized by an activated mutant B-RAF kinase, which comprises detecting a mutation in the B-RAF kinase gene or protein in a tissue sample from a patient and treating the patient with an effective B-RAF kinase inhibiting compound, especially a compound described herein.
A important aspect of this invention includes those instances wherein the mutant B-RAF kinase exhibits a mutation described in Table 1, especially the V599E mutation.
A particularly important aspect of this invention includes those instances wherein disease is melanoma and the mutant B-RAF kinase exhibits a mutation described in Table 1, especially the V599E mutation.
-7- Case 4-32905A/USN 00
O
O
Accordingly, this invention includes a method of treating a disease characterized by mutant B-RAF kinase, which comprises detecting a mutation in the B-RAF kinase gene selected from G1388A, G1388T, G1394C, G1394A, G1394T, G1403C, G1403A, G1753A, T1782G, G1783C, C1786G, T1787G, T1796A and TG1796-97AT, or corresponding mutation in the RAF kinase protein, in a tissue sample from a patient and treating the patient with an effective B-RAF kinase inhibiting compound described herein.
00 Within the context of the present disclosure, the general terms used herein to describe N compounds of formula have the following meanings, unless indicated otherwise.
The term "lower" denotes a radical having up to and including a maximum of 7, especially up to and including a maximum of 4, carbon atoms, the radicals in question being unbranched or branched one or more times.
Any reference to compounds, salts and the like in the plural is always to be understood as including one compound, one salt or the like.
Asymmetric carbon atoms which may be present (for example in compounds of formula I (or an N-oxide thereof) wherein n 1 and R is lower alkyl) may have the or configuration, preferably the or configuration. Substituents at a double bond or a ring may be in the cis Z) or trans E) form. Accordingly, the present compounds may be in the form of isomeric mixtures or in the form of pure isomers, preferably in the form of an enantiomerically pure diastereoisomer.
The index r is preferably 0 or 1.
The index n is preferably 0 or 1, especially 0. It may also be 2.
The index m is preferably 0, 1 or 2, especially 0, or also 1.
Of the ring members A, B, D, E and T in formula I, not more than three are to be N, and the others are CH or CQ. Preferably, the ring members A, B, D and E are each CH or CQ and T is N.
-8 Case 4-32905A/USN 00 When G is a divalent group -CH 2
-CH
2 or -CH 2 the methylene group is in each case bonded to the ring having the ring members A, B, D, E and T, while the hetero atom (O, S or NH) is bonded to the isoquinoline ring in formula I.
Lower alkylene G may be branched or, preferably, unbranched and is especially branched or, preferably, unbranched C 1
-C
4 alkylene, especially methylene (-CH 2 ethylene (-CH 2
-CH
2 0 trimethylene (-CH 2
-CH
2
-CH
2 or tetramethylene (-CH 2
-CH
2
-CH
2
-CH
2 G is preferably 00 oO methylene. Lower alkylene G is preferably unsubstituted, but may be substituted by acyloxy, N oxo, halogen or hydroxy.
Acyl in acyloxy-substituted lower alkylene G substituents is preferably arylcarbonyloxy, wherein aryl is as defined below, especially benzoyloxy or lower alkanoyloxy, more especially benzoyloxy; acyloxy-substituted lower alkylene is especially benzoyloxysubstituted methylene.
G as hydroxy-substituted lower alkylene is preferably hydroxymethylene A preferred oxo-substituted lower alkylene G substituents is carbonyl Halogen-substituted lower alkylene G substituents are monohalo to perhalo substituted alkylene, such as difluoromethylene.
Lower alkyl is especially CI-C 4 alkyl, for example n-butyl, sec-butyl, tert-butyl, n-propyl, isopropyl or, especially, methyl or also ethyl, or, in the case of Y as lower alkyl, it may be especially isopentyl.
Aryl is preferably an aromatic radical having from 6 to 14 carbon atoms, such as phenyl, biphenyl, naphthyl, fluorenyl or phenanthrenyl, especially phenyl, the aryl radical being unsubstituted or substituted by one or more substituents, preferably up to three, especially one or two substituents, especially selected from amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, etherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenyl- -9- Case 4-32905A/USN 00
O
CI sulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl, alkylphenylsulfonyl, lower alkenyl, such as ethenyl, phenyl, arylalkyl, such as benzyl or 1-methyl-1-phenyl-ethyl, lower alkylthio, such as methylthio, lower alkyl silyl, such as trimethylsilyl, lower alkanoyl, such as acetyl, unsubstituted or substituted cycloalkyl, lower alkylmercapto, such as methylmercapto (-S-CH 3 halo-lower alkylmercapto, such as trifluoromethylmercapto (-S-CF 3 lower alkanesulfonyl, halo-lower alkanesulfonyl, such as, Sespecially, trifluoromethanesulfonyl, dihydroxybora (-B(OH) 2 heterocyclyl, and lower 00 alkylenedioxy, such as methylenedioxy, bonded to adjacent carbon atoms of the ring or §wherein two adjacent positions are substituted by alkylene or alkenylene to form a 5 to 7 membered ring that is fused to the aryl ring; aryl is preferably phenyl that is unsubstituted or substituted by one or two identical or different substituents from the group above especially halogen, especially fluorine or chlorine; lower alkyl, especially methyl, ethyl, propyl or tbutyl; halo-lower alkyl, especially trifluoromethyl; hydroxy; lower alkoxy, especially methoxy or ethoxy; phenyl-lower alkoxy; lower alkanoyl, such as acetyl, phenyloxy, halolower alkyloxy, such as trifluoromethoxy or 1,1,2,2-tetrafluoroethyloxy, lower alkoxycarbonyl, such as ethoxycarbonyl, lower alkylmercapto, such as methylmercapto, halolower alkylmercapto, such as trifluoromethylmercapto, hydroxy-lower alkyl, such as hydroxymethyl, lower alkanesulfonyl, such as methanesulfonyl, halo-lower alkanesulfonyl, such as trifluoromethanesulfonyl, phenylsulfonyl; more especially by one or two identical or different substituents selected from unsubstituted or substituted lower alkyl, especially methyl, t-butyl or trifluoromethyl and halogen, especially fluorine or chlorine.
Heteroaryl is preferably an unsaturated heterocyclic radical in the bonding ring and is preferably mono- or also bi- or tri-cyclic; wherein at least in the ring bonding to the radical of the molecule of formula I one or more, preferably from one to four, especially one or two, carbon atoms of a corresponding aryl radical have been replaced by a hetero atom selected from the group consisting of nitrogen, oxygen and sulfur, the bonding ring having preferably from 4 to 12, especially from 5 to 7, ring atoms; wherein heteroaryl is unsubstituted or substituted by one or more, especially from one to three, identical or different substituents from the group consisting of the substituents mentioned above as substituents of aryl; and is especially a heteroaryl radical selected from the group consisting of imidazolyl, thienyl, furyl, pyranyl, thianthrenyl, isobenzofuranyl, benzofuranyl, chromenyl, 2H-pyrrolyl, pyrrolyl, lower alkyl- Case 4-32905A/USN 00 substituted imidazolyl, benzimidazolyl, pyrazolyl, thiazolyl, isothiazolyl, oxazolyl, isoxazolyl, pyridyl, pyrazinyl, pyrimidinyl, pyridazinyl, indolizinyl, isoindolyl, 3H-indolyl, indolyl, indazolyl, triazolyl, tetrazolyl, purinyl, 4H-quinolizinyl, isoquinolyl, quinolyl, phthalazinyl, naphthyridinyl, quinoxalyl, quinazolinyl, cinnolinyl, pteridinyl, carbazolyl, phenanthridinyl, acridinyl, perimidinyl, phenanthrolinyl and furazanyl, each of those radicals being bonded via a ring having at least one hetero atom to the radical of the molecule of formula I; pyridyl is especially preferred.
00 oO Mono- or di-substituted amino is especially amino that is substituted by one or two identical or different radicals from lower alkyl, such as methyl; hydroxy-lower alkyl, such as 2hydroxyethyl; phenyl-lower alkyl; lower alkanoyl, such as acetyl; benzoyl; substituted benzoyl, wherein the phenyl radical is unsubstituted or, especially, is substituted by one or more, preferably one or two, substituents selected from nitro and amino, or also from halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl and carbamoyl; and phenyl-lower alkoxycarbonyl wherein the phenyl radical is unsubstituted or, especially, is substituted by one or more, preferably one or two, substituents selected from nitro and amino, or also from halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl and carbamoyl; and is preferably N-lower alkylamino, such as N-methylamino, hydroxy-lower alkylamino, such as 2-hydroxyethylamino, phenyl-lower alkylamino, such as benzylamino, N,N-di-lower alkylamino, N-phenyl-lower alkyl-N-lower alkylamino, N,N-dilower alkylphenylamino, lower alkanoylamino, such as acetylamino, or a substituent selected from the group consisting of benzoylamino and phenyl-lower alkoxycarbonylamino, wherein in each case the phenyl radical is unsubstituted or, especially, is substituted by nitro or amino, or also by halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl or by carbamoyl, or alternatively or additionally to the preceding group of radicals, by aminocarbonylamino.
Halogen is especially fluorine, chlorine, bromine or iodine, more especially fluorine, chlorine or bromine, in particular fluorine and chlorine.
11 Case 4-32905A/USN 00 C1 Alkyl has preferably up to a maximum of 12 carbon atoms and is especially lower alkyl, more especially methyl, or also ethyl, n-propyl, isopropyl or tert-butyl.
Substituted alkyl is especially lower alkyl, preferably methyl, which may contain one or more, especially up to three, substituents selected especially from the group consisting of halogen, especially fluorine, for example trifluromethyl or perfluoroalkyl generall, and also amino, Nlower alkylamino, N,N-di-lower alkylamino, N-lower alkanoylamino, hydroxy, cyano, 00 carboxy, lower alkoxycarbonyl and phenyl-lower alkoxycarbonyl. Trifluoromethyl is an important substituted alkyl.
Etherified hydroxy is especially Cs-C 2 oalkyloxy, such as n-decyloxy, lower alkoxy (preferred), such as methoxy, ethoxy, isopropyloxy or n-pentyloxy, phenyl-lower alkoxy, such as benzyloxy, or also phenyloxy, or, alternatively or additionally to the preceding group, C 8
C
2 0oalkyloxy, such as n-decyloxy, halo-lower alkoxy, such as trifluoromethyloxy or 1,1,2,2tetrafluoroethoxy.
Esterified hydroxy is especially lower alkanoyloxy, benzoyloxy, lower alkoxycarbonyloxy, such as tert-butoxycarbonyloxy, or phenyl-lower alkoxycarbonyloxy, such as benzyloxycarbonyloxy.
Esterified carboxy is especially lower alkoxycarbonyl, such as tert-butoxycarbonyl or ethoxycarbonyl, phenyl-lower alkoxycarbonyl or phenyloxycarbonyl.
Alkanoyl is especially alkyl-carbonyl, more especially lower alkanoyl, for example acetyl.
N-Mono- or N,N-di-substituted carbamoyl is especially substituted at the terminal nitrogen by one or two substituents lower alkyl, phenyl-lower alkyl or hydroxy-lower alkyl.
Alkylphenylthio is especially lower alkylphenylthio.
Alkylphenylsulfinyl is especially lower alkylphenylsulfinyl.
-12- Case 4-32905A/USN 00
O
CN- Alkylphenylsulfonyl is especially lower alkylphenylsulfonyl.
Pyridyl Y is preferably 3- or 4-pyridyl.
Unsubstituted or substituted cycloalkyl is preferably C 3
-C
8 cycloalkyl which is unsubstituted or is substituted in the same manner as aryl, especially as defined for phenyl. Preference is Sgiven to cyclohexyl, or also cyclopentyl or cyclopropyl. Preference is given also to 4-lower 00 alkyl-cyclohexyl, such as 4-tert-butylcyclohexyl.
0 C If present, Z is preferably amino, hydroxy-lower alkylamino, such as 2-hydroxyethylamino, lower alkanoylamino, such as acetylamino, nitrobenzoylamino, such as 3-nitrobenzoylamino, aminobenzoylamino, such as 4-aminobenzoylamino, phenyl-lower alkoxycarbonylamino, such as benzyloxycarbonylamino, or halogen, such as bromine; preferably only one substituent is present (m especially one of the last-mentioned substituents, especially halogen. Very special preference is given to a compound of formula I (or an N-oxide thereof) wherein Z is not present (m 0).
Heterocyclyl is especially a five- or six-membered heterocycle having 1 or 2 hetero atoms selected from the group consisting of nitrogen, oxygen and sulfur, which heterocycle may be unsaturated or fully or partially saturated, and is unsubstituted or substituted, especially by lower alkyl, such as methyl; preference is given to a radical selected from 2-methyl-pyrimidin- 4-yl, oxazol-5-yl, 2-methyl-1,3-dioxolan-2-yl, 1 H-pyrazol-3-yl and 1-methyl-pyrazol-3-yl.
Aryl in the form of phenyl that is substituted by lower alkylenedioxy, such as methylenedioxy, bonded to two adjacent carbon atoms is preferably 3,4-methylenedioxyphenyl.
An N-oxide of a compound of formula I is preferably an N-oxide in which an isoquinoline ring nitrogen or a nitrogen in the ring having the ring members A, B, D and E carries an oxygen atom, or more than one of the mentioned nitrogen atoms carry an oxygen atom.
Salts are especially the pharmaceutically acceptable salts of compounds of formula I (or an N-oxide thereof).
-13- Case 4-32905A/USN 00 CN Such salts are formed, for example, by compounds of formula I (or an N-oxide thereof) having a basic nitrogen atom as acid addition salts, preferably with organic or inorganic acids, especially the pharmaceutically acceptable salts. Suitable inorganic acids are, for example, Shydrohalic acids, such as hydrochloric acid; sulfuric acid; or phosphoric acid. Suitable organic acids are, for example, carboxylic, phosphonic, sulfonic or sulfamic acids, for example acetic acid, propionic acid, octanoic acid, decanoic acid, dodecanoic acid, glycolic acid, lactic acid, S2-hydroxybutyric acid, gluconic acid, glucosemonocarboxylic acid, fumaric acid, succinic 00 acid, adipic acid, pimelic acid, suberic acid, azelaic acid, malic acid, tartaric acid, citric acid, glucaric acid, galactaric acid, amino acids, such as glutamic acid, aspartic acid, Nmethylglycine, acetylaminoacetic acid, N-acetylasparagine, N-acetylcysteine, pyruvic acid, acetoacetic acid, phosphoserine, 2- or 3-glycerophosphoric acid, maleic acid, hydroxymaleic acid, methylmaleic acid, cyclohexanecarboxylic acid, benzoic acid, salicylic acid, 1- or 3hydroxynaphthyl-2-carboxylic acid, 3,4,5-trimethoxybenzoic acid, 2-phenoxybenzoic acid, 2acetoxybenzoic acid, 4-aminosalicylic acid, phthalic acid, phenylacetic acid, glucuronic acid, galacturonic acid, methane- or ethane-sulfonic acid, 2-hydroxyethanesulfonic acid, ethane- 1,2-disulfonic acid, benzenesulfonic acid, 2-naphthalenesulfonic acid, naphthalenedisulfonic acid, N-cyclohexylsulfamic acid, N-methyl-, N-ethyl- or N-propyl-sulfamic acid, or other organic protonic acids, such as ascorbic acid.
When negatively charged radicals, such as carboxy or sulfo, are present, salts with bases can also be formed, for example metal or ammonium salts, such as alkali metal or alkaline earth metal salts, for example sodium, potassium, magnesium or calcium salts, or ammonium salts with ammonia or suitable organic amines, such as tertiary monoamines, for example triethylamine or tri(2-hydroxyethyl)amine, or heterocyclic bases, for example Nethylpiperidine or N,N'-dimethyl-piperazine.
When a basic group and an acid group are present in the same molecule, a compound of formula I (or an N-oxide thereof) can also form internal salts.
For isolation or purification it is also possible to use pharmaceutically unacceptable salts, for example picrates or perchlorates. Only the pharmaceutically acceptable salts or the free -14- Case 4-32905A/USN 00 I compounds (optionally in the form of pharmaceutical compositions) are used therapeutically, and those are therefore preferred.
SIn view of the close relationship between the novel compounds in free form and in the form of their salts, including also those salts which can be used as intermediates, for example in the purification of the novel compounds or for their identification, hereinbefore and hereinafter Sany reference to the free compounds is also to be understood as including the corresponding 00 salts, as appropriate and expedient. 00 The present invention further relates to a method of inhibiting RAF kinase, which comprises contacting the RAF kinase with a compound of formula Preferably, the RAF kinase is Bor C-RAF kinase, or a mutant RAF kinase, especially a mutant B-RAF kinase, particularly the V599E mutant. The RAF kinase may be isolated or in a cellular environment.
The compounds of formula I (or N-oxides thereof) have valuable pharmacological properties, as described above.
A compound of formula I (or an N-oxide thereof) can be administered on its own or in combination with one or more other therapeutic agents, it being possible for fixed combinations to be used or for a compound according to the invention and one or more other therapeutic agents to be administered in a staggered manner over time or independently of one another, or the combined administration of fixed combinations and of one or more other therapeutic agents is possible. In particular, the administration of a compound of formula I (or an N-oxide thereof) for tumour treatment can be carried out, alongside or additionally, in combination with chemotherapy (combination with one or more other chemotherapeutic agents, especially cytostatics, or with hormones or compounds having a hormone-like activity), radiotherapy, immunotherapy, surgical treatment or combinations thereof. Long-term therapy is also possible, as is adjuvant therapy in conjunction with other treatment methods, such as those just mentioned. Treatment to maintain the status of a patient after tumour remission or even chemopreventive treatment, for example in the case of at-risk patients, is also possible.
Case 4-32905A/USN 00 There come into consideration as therapeutic agents with which the compounds according to the invention can be combined especially one or more antiproliferative, cytostatic or cytotoxic compounds, for example one or more chemotherapeutic agents selected from the group Scomprising an inhibitor of polyamine biosynthesis, an inhibitor of a different protein kinase, especially protein kinase C, or of a tyrosine protein kinase, such as epidermal growth factor receptor protein tyrosine kinase, an inhibitor of a growth factor, such as vascular endothelial 8 growth factor, a cytokine, a negative growth regulator, such as TGF-P or IFN-P, an aromatase 00 inhibitor, hormones or hormone analogues, and a conventional cytostatic agent.
0 Compounds according to the invention are intended not only for the (prophylactic and, preferably, therapeutic) treatment of human beings, but also for the treatment of other warmblooded animals, for example of commercially useful animals, for example rodents, such as mice, rabbits or rats, or guinea pigs.
In general, the invention relates also to the use of a compound of formula I (or an N-oxide thereof) in inhibiting RAF kinase activity.
A compound of formula I (or an N-oxide thereof) can also be used for diagnostic purposes, for example in order that tumours obtained from warm-blooded animals, especially human beings, as the original "host" and transplanted into mice, can be examined for reduced growth after addition of such a compound, in order thus to study their sensitivity to the compound in question, thus allowing possible methods of treatment for a tumour disease in the original host to be ascertained and determined better.
In the groups of preferred compounds of formula I mentioned below, definitions of substituents from the above-mentioned general definitions may expediently be used, for example in order to replace more general definitions by definitions that are more specific or, especially, by definitions that are indicated as being preferred; preference is in each case given to the definitions indicated above as being preferred or mentioned by way of example.
Preference is given to a compound of formula I wherein r is from 0 to 2, preferably 0; -16- Case 4-32905A/USN 00 C, n is 0 or 1; S m is 1 or, especially, 0; A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N, or A, O B, E and T are CH and D is N, or A, T, D and E are CH and B is N; particularly wherein A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N.
G is lower alkylene, especially methylene or ethylene (-CH 2
-CH
2
-CH
2
-CH
2 Shydroxymethylene or benzoyloxy-methylene; 00 Q is methyl which is bonded to A, to D or to A and D; SR is H or lower alkyl, especially H or methyl; X is oxa or thia, expecially -NH- Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of amino; lower alkanoylamino, especially acetylamino; halogen, especially fluorine, chlorine or bromine; unsubstituted or substituted lower alkyl, especially methyl, ethyl, propyl, t-butyl or halo-lower alkyl, especially trifluoromethyl; hydroxy; lower alkoxy, especially methoxy or ethoxy; phenyl-lower alkoxy, especially benzyloxy; cyano, lower alkenyl, such as ethenyl, Cs-Ci 2 alkoxy, especially n-decyloxy, lower alkoxycarbonyl, such as tert-butoxycarbonyl, carbamoyl, lower alkylcarbamoyl, such as Nmethyl- or N-tert-butyl-carbamoyl, lower alkanoyl, such as acetyl, phenyloxy, halo-lower alkyloxy, such as trifluoromethoxy or 1,1,2,2-tetrafluoroethyloxy, lower alkoxycarbonyl, such as ethoxycarbonyl, lower alkylmercapto, such as methylmercapto, halo-lower alkylmercapto, such as trifluoromethylmercapto, hydroxy-lower alkyl, such as hydroxymethyl or 1hydroxymethyl, lower alkanesulfonyl, such as methanesulfonyl, halo-lower alkanesulfonyl, such as trifluoromethanesulfonyl, phenylsulfonyl and lower alkylenedioxy, such as methylenedioxy, bonded to two adjacent carbon atoms or wherein two adjacent positions are substituted by alkylene or alkenylene to form a 5 to 7 membered ring that is fused to the phenyl ring, especially by one or two substituents selected from halogen, such as chlorine or bromine, unsubstituted lower alkyl, such as methyl, and halo-substitued lower alkyl, such as trifluoromethyl, Y is especially phenyl or phenyl that is substituted by one or two identical or different substituents, which are especially halogen, especially fluoro or chloro, and/or unsubstitued or substituted lower alkyl; Z is amino; N-lower alkylamino, such as N-methylamino; hydroxy-lower alkylamino, such as 2-hydroxyethylamino; phenyl-lower alkylamino, such as benzylamino; N,N-di-lower alkyl- -17- Case 4-32905A/USN 00 CI amino; N-phenyl-lower alkyl-N-lower alkylamino; N,N-di-lower alkylphenylamino; lower alkanoylamino, such as acetylamino; or a substituent selected from the group consisting of benzoylamino and phenyl-lower alkoxycarbonylamino, wherein the phenyl radical in each 0case is unsubstituted or, especially, is substituted by nitro or by amino, or also by halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl or by carbamoyl; or Z is halogen, especially bromine; more Sespecially amino, acetylamino, nitrobenzoylamino, aminobenzoylamino, 2- 00 hydroxyethylamino, benzyloxycarbonylamino or bromine; and 0O Sor a salt or N-oxide thereof.
Special preference is given to a compound of formula I wherein r is 0; n is 0; m is 0; B, D, E and T are CH and A is N (3-pyridyl), or especially wherein A, B, D and E are each CH and T is N (4-pyridyl); G is lower alkylene, especially methylene; X is -NR- especially -NH-; Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of halogen, especially fluorine or, more especially, chlorine or bromine; lower alkyl, especially methyl; and halo-lower alkyl, especially trifluoromethyl; especially 4-chlorophenyl, 3- or 4-methylphenyl, trifluoromethylphenyl, 3-bromo-5-trifluoromethylphenyl, or more especially phenyl; or also 4-methyl-3-iodophenyl, 3,4-bis(trifluoromethyl)phenyl or 3-bromo-4-ethylphenyl; or a salt thereof.
Special preference is given also to a compound of formula I wherein r is 0; n is from 0 to 2; m is 0; A, B, D and E are each CH and T is N; 18 Case 4-32905A/USN 00 CN G is methylene; SR is H; X is especially and Y is phenyl that is unsubstituted or substituted by halogen, especially fluorine or chlorine, or by lower alkyl, such as methyl or trifluromethyl, lower alkoxy, especially methoxy, such as 4chlorophenyl, 4-methoxyphenyl or 4-trifluoromethoxyphenyl; naphthyl; cyclohexyl that is Sunsubstituted or substituted by lower alkyl, especially by tert-butyl, such as 4-tert-butyl- 0o cyclohexyl; indolyl that is unsubstituted or substituted by halogen, especially by fluorine, Sespecially 6-fluoroindol-3-yl; or lower alkyl, especially isopentyl; or a salt thereof where a salt-forming group is present.
In particular, preference is given also to a compound of formula I wherein r is 0; n is 0; m is O; B, D, E and T are CH and A is N or A, B, D and E are each CH and T is N; G is lower alkylene; X is -NH-; Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of halogen and lower alkyl.
Preference is given also to a compound of formula I wherein r is 0; n is from 0 to 2; m is 0; A, B, D and E are each CH and T is N; G is methylene; R is H; X is -NR; and Y is phenyl that is unsubstituted or substituted by halogen, lower alkyl, lower alkoxy or cyclohexyl that is unsubstituted or substituted by lower alkyl.
-19- Case 4-32905A/USN 00
O
O
CI In particular, especially useful compounds include those wherein r is O; t n is 0; m is 0; A, B, D and E are each CH and T is N; G is methylene; SX and 00 Y is phenyl that is substituted by one or two identical or different substituents selected from Shalogen and lower alkyl. Special preference is given to such compounds wherein Y is phenyl that is substituted in the 4-position by t-butyl or trifluoromethyl.
The compounds according to the invention can be prepared by processes known per se for other compounds, especially by a) reacting a compound of formula II
L
N
A=B Z
P
T D-E wherein r, m, A, B, D, E, T, G, Q and Z are as defined for a compound of formula I and L is a nucleofugal leaving group, with a compound of formula III Y (III)
H
wherein n, R, X and Y are as defined for a compound of formula I, functional groups in the compounds of formula II and of formula III that are not to take part in the reaction being in protected form, if necessary, and removing any protecting groups that are present, wherein the starting compounds mentioned in process a) may also be in the form of salts where a saltforming group is present and reaction in the salt form is possible; Case 4-32905A/USN 00 C and, if desired, converting a resulting compound of formula I, or an N-oxide thereof, into a t different compound of formula I or an N-oxide thereof, converting a free compound of formula I, or an N-oxide thereof, into a salt, converting a resulting salt of a compound of formula I, or of an N-oxide thereof, into the free compound or into a different salt, and/or separating a mixture of isomeric compounds of formula I, or its N-oxide, into the individual isomers.
SDetailed description of the process variants: 00 In the following, more detailed description of the preparation process, r, n, m, A, B, D, E, G, Q, R, X, Y and Z and are as defined for compounds of formula I, unless indicated otherwise.
Process a) In the compound of formula II, a nucleofugal leaving group L is especially halogen, more especially bromine, iodine or, very especially, chlorine.
The reaction between the compound of formula II and the compound of formula III takes place in suitable inert polar solvents, especially alcohols, for example lower alkanols, such as methanol, propanol or, especially, ethanol or n-butanol, or it takes place in a melt without the addition of a solvent, especially when one of the reactants is in liquid form. The reaction takes place at elevated temperatures, preferably from approximately 60'C to reflux temperature, for example under reflux conditions or at a temperature of from approximately 90 to approximately 1 10°C. The compound of formula III can also be used in the form of a salt, for example in the form of an acid addition salt with a strong acid, such as a hydrogen halide, for example in the form of the hydrochloride salt, or the corresponding acid, for example hydrochloric acid, can be added in a suitable solvent, for example an ether, such as dioxane.
Where one or more other functional groups, for example carboxy, hydroxy, amino or mercapto, in a compound of formula II and/or III are present in protected form or must be present in protected form because they are not to take part in the reaction, the protecting groups are groups which are customarily used in the synthesis of peptide compounds, but also in the synthesis of cephalosporins and penicillins as well as of nucleic acid derivatives and sugars.
The protecting groups may already be present in the precursors and are to protect the functional groups in question against undesired secondary reactions, such as acylations, -21- Case 4-32905A/USN 00 CI etherifications, esterifications, oxidations, solvolysis and the like. The protecting groups for functional groups in starting materials whose reaction is to be avoided, especially carboxy, amino, hydroxy and mercapto groups, include especially those protecting groups (conventional protecting groups) which are customarily used in the synthesis of peptide compounds, cephalosporins, penicillins or nucleic acid derivatives and sugars. The protecting groups may already be present in the precursors and are to protect the functional groups in Squestion against undesired secondary reactions, such as acylations, etherifications, 00 esterifications, oxidations, solvolysis, etc.. In some cases the protecting groups can cause the reactions to proceed selectively, for example stereoselectively. It is a characteristic of protecting groups that they can be removed easily, that is to say without undesired secondary reactions, for example by solvolysis, by reduction, by photolysis or enzymatically, for example also under conditions analogous to physiological conditions, and that they are not present in the end products. The person skilled in the art will know or can readily find out which protecting groups are suitable in the reactions mentioned hereinbefore and hereinafter.
The protection of functional groups by means of such protecting groups, the protecting groups themselves, and reactions for their removal are described, for example, in standard works such as J. F. W. McOmie, "Protective Groups in Organic Chemistry", Plenum Press, London and New York 1973, in Th. W. Greene, "Protective Groups in Organic Synthesis", Wiley, New York 1981, in "The Peptides"; Volume 3 Gross and J. Meienhofer, eds.), Academic Press, London and New York 1981, in "Methoden der organischen Chemie", Houben Weyl, 4th edition, Volume 15/I, Georg Thieme Verlag, Stuttgart 1974, in Jakubke and H.
Jescheit, "Aminosiuren, Peptide, Proteine", Verlag Chemie, Weinheim, Deerfield Beach and Basle 1982, and in Jochen Lehmann, "Chemie der Kohlenhydrate: Monosaccharide und Derivate", Georg Thieme Verlag, Stuttgart 1974.
Protecting groups mentioned in the Examples are preferably introduced and, if required, removed analogously to the mentioned methods.
Additional process steps In the additional process steps, which are carried out if desired, functional groups in the starting compounds that are not to take part in the reaction may be present in unprotected -22- Case 4-32905A/USN 00 oO 1 form or in protected form, for example protected by one or more of the protecting groups Smentioned above under process All or some of the protecting groups are then removed by one of the methods mentioned under process a).
Salts of compounds of formula I (or an N-oxide thereof) having a salt-forming group can be prepared in a manner known per se. For example, acid addition salts of compounds of for- Smula I or their N-oxides can be obtained, for example, by treatment with an acid or a suitable Sanion exchange reagent. It is also possible to convert salts having two acid molecules (for 00 example a dihalide of a compound of formula I (or of an N-oxide thereof)) into salts having Sone acid molecule per compound of formula I (or N-oxide thereof) (for example into a monohalide); that can be achieved, for example, by heating to the molten state or, for example, by heating in solid form under a high vacuum at elevated temperature, for example from 130 to 170 0 C, one molecule of the acid being expelled per molecule of a compound of formula I (or of an N-oxide thereof).
Salts can be converted into the free compounds in customary manner, for example by treatment with a suitable basic agent, for example with alkali metal carbonates, hydrogen carbonates or hydroxides, for example potassium carbonate or sodium hydroxide.
Stereoisomeric mixtures, for example mixtures of diastereoisomers, can be separated into the corresponding isomers in a manner known per se by means of suitable separating procedures. For example, diastereoisomeric mixtures can be separated into the individual diastereoisomers by fractional crystallisation, chromatography, solvent partitioning and the like. The separation may be carried out either at the stage of one of the starting materials or in the case of the compounds of formula I themselves. Enantiomers can be separated by formation of diastereoisomeric salts, for example by salt formation with an enantiomerically pure chiral acid, or by chromatographic methods, for example by chromatography, e.g.
HPLC, on chromatographic carrier materials with chiral ligands.
A compound of formula I can be converted into a corresponding N-oxide. The reaction is carried out with a suitable oxidising agent, preferably a peroxide, for example m-chloroperbenzoic acid, in a suitable solvent, for example a halogenated hydrocarbon, such as chloroform or methylene chloride, or in a lower alkanecarboxylic acid, such as acetic acid, preferably at a temperature of from 0°C to the boiling temperature of the reaction mixture, especially approximately room temperature.
23 Case 4-32905A/USN 00
O
O
A compound of formula I (or an N-oxide thereof) wherein Z is lower alkanoylamino can be Shydrolysed to the corresponding amino compound (Z amino), for example by hydrolysis r'- O with an inorganic acid, especially hydrochloric acid (HCI), in aqueous solution, it being possible to add further solvents, preferably at elevated temperature, for example under reflux.
SA compound of formula I (or an N-oxide thereof) wherein Z is amino substituted by one or Stwo identical or different radicals selected from lower alkyl, hydroxy-lower alkyl and phenyl- 00 lower alkyl can be converted into the compound that is correspondingly substituted at the Samino group, for example, by reaction with a lower alkyl halide, a hydroxy-lower alkyl halide, which is hydroxy-protected if necessary (see process or a phenyl-lower alkyl halide under reaction conditions analogous to those mentioned under process For the introduction of 2-hydroxy-lower alkyl substituents at the amino group Z, addition starting from an epoxide (for example ethylene oxide) is also possible. The addition is carried out especially in aqueous solution and/or in the presence of polar solvents, such as alcohols, for example methanol, ethanol, isopropanol or ethylene glycol, ethers, such as dioxane, amides, such as dimethyl formamide, or phenols, such as phenol, also under anhydrous conditions, in apolar solvents, such as benzene and toluene, or in benzene/water emulsions, optionally in the presence of acid or basic catalysts, for example of alkaline solutions, such as sodium hydroxide solution, or in the presence of hydrazine-doped solid phase catalysts, such as aluminium oxide, in ethers, for example diethyl ether, generally at temperatures of approximately from 0°C to the boiling temperature of the reaction mixture in question, preferably at from 20 0 C to reflux temperature, where appropriate under elevated pressure, for example in a bomb tube, whereby the boiling temperature may also be exceeded, and/or under an inert gas, such as nitrogen or argon. Reductive alkylation of an amino group Z with a lower alkanealdehyde, a phenyl-lower alkanealdehyde or a hydroxy-lower alkanealdehyde, which is hydroxy-protected if necessary, is also possible. The reductive alkylation preferably takes place with hydrogenation in the presence of a catalyst, especially a noble metal catalyst, such as platinum or, especially, palladium, which is preferably bonded to a support material, such as carbon, or a heavy metal catalyst, such as Raney nickel, at normal pressure or at pressures of from 0.1 to 10 megapascals (MPa), or with reduction by means of complex hydrides, such as boron hydrides, especially alkali metal cyanoborohydrides, for example sodium cyanoborohydride, in the presence of a suitable acid, preferably of a relatively weak acid, such as a lower alkanecarboxylic acid or, especially, a sulfonic acid, such as p-toluenesulfonic acid; in customary solvents, for example alcohols, such as methanol or ethanol, or -24- Case 4-32905A/USN 00 oO 0C ethers, for example cyclic ethers, such as tetrahydrofuran, in the absence or presence of Swater.
Ct O In a compound of formula I (or an N-oxide thereof), an amino group Z can be converted by acylation into an amino group that is substituted by lower alkanoyl, benzoyl, substituted benzoyl or by phenyl-lower alkoxycarbonyl wherein the phenyl radical is unsubstituted or Ssubstituted. The corresponding acids contain a free carboxy group or are in the form of C, reactive acid derivatives thereof, for example in the form of the derived activated esters or 00 0 reactive anhydrides, also reactive cyclic amides. The reactive acid derivatives can also be C formed in situ. Activated esters are especially esters that are unsaturated at the linking carbon atom of the radical to be esterified, for example of the vinyl ester type, such as vinyl esters (obtainable, for example, by transesterification of a corresponding ester by vinyl acetate; activated vinyl ester method), carbamoyl esters (obtainable, for example, by treating the corresponding acid with an isoxazolium reagent; 1,2-oxazolium or Woodward method), or 1lower alkoxyvinyl esters (obtainable, for example, by treating the corresponding acid with a lower alkoxyacetylene; ethoxyacetylene method), or esters of the amidino type, such as N,N'disubstituted amidino esters (obtainable, for example, by treating the corresponding acid with a suitable N,N'-disubstituted carbodiimide, for example N,N'-dicyclohexylcarbodiimide or, especially, N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide; carbodiimide method) or N,Ndisubstituted amidino esters (obtainable, for example, by treating the corresponding acid with an N,N-disubstituted cyanamide; cyanamide method), suitable aryl esters, especially phenyl esters suitably substituted by electrophilic substituents (obtainable, for example, by treating the corresponding acid with a suitably substituted phenol, for example 4-nitrophenol, 4methylsulfonylphenol, 2,4,5-trichlorophenol, 2,3,4,5,6-pentachlorophenol or 4phenyldiazophenol, in the presence of a condensing agent, such as N,N'-dicyclohexylcarbodiimide; activated aryl esters method), cyanomethyl esters (obtainable, for example, by treating the corresponding acid with chloroacetonitrile in the presence of a base; cyanomethyl esters method), thioesters, especially unsubstituted or substituted, for example nitrosubstituted, phenylthio esters (obtainable, for example, by treating the corresponding acid with unsubstituted or substituted, for example nitro-substituted, thiophenols, inter alia by means of the anhydride or carbodiimide method; activated thiolesters method), or, especially, amino or amido esters (obtainable, for example, by treating the corresponding acid with an N- Case 4-32905A/USN 00 C1 hydroxyamino or N-hydroxyamido compound, for example N-hydroxysuccinimide, Nhydroxypiperidine, N-hydroxyphthalimide, N-hydroxy-5-norbomene-2,3-dicarboxylic acid t. imide, 1 -hydroxybenztriazole or 3-hydroxy-3,4-dihydro-1,2,3-benztriazin-4-one, for example Sby the anhydride or carbodiimide method; activated N-hydroxy esters method). Intemal esters, for example y-lactones, can also be used. Anhydrides of acids may be symmetrical or, preferably, mixed anhydrides of those acids, for example anhydrides with inorganic acids, 0 such as acid halides, especially acid chlorides (obtainable, for example, by treating the 00 corresponding acid with thionyl chloride, phosphorus pentachloride, phosgene or oxalyl 0chloride; acid chloride method), azides (obtainable, for example, from a corresponding acid ester via the corresponding hydrazide and treatment thereof with nitrous acid; azide method), anhydrides with carbonic acid semiesters, for example carbonic acid lower alkyl semiesters (especially chloroformic acid methyl esters) (obtainable, for example, by treating the corresponding acid with chloroformic acid lower alkyl esters or with a -lower alkoxycarbonyl-2-lower alkoxy-1,2-dihydroquinoline; mixed O-alkylcarbonic acid anhydrides method), or anhydrides with dihalogenated, especially dichlorinated, phosphoric acid (obtainable, for example, by treating the corresponding acid with phosphorus oxychloride; phosphorus oxychloride method), anhydrides with other phosphoric acid derivatives (for example those which can be obtained with phenyl N-phenylphosphoramidochloridate, or by reacting alkylphosphoric acid amides in the presence of sulfonic acid anhydrides and/or racemisationreducing additives, such as N-hydroxybenzotriazole, or in the presence of cyanophosphonic acid diethyl ester) or with phosphorous acid derivatives, or anhydrides with organic acids, such as mixed anhydrides with organic carboxylic acids (obtainable, for example, by treating the corresponding acid with an unsubstituted or substituted lower alkane- or phenyl-lower alkane-carboxylic acid halide, for example phenylacetic acid, pivalic acid or trifluoroacetic acid chloride; mixed carboxylic acid anhydrides method) or with organic sulfonic acids (obtainable, for example, by treating a salt, such as an alkali metal salt, of the corresponding acid with a suitable organic sulfonic acid halide, such as lower alkane- or aryl-, for example methane- or p-toluene-sulfonic acid chloride; mixed sulfonic acid anhydrides method) as well as symmetrical anhydrides (obtainable, for example, by condensing the corresponding acid in the presence of a carbodiimide or of 1-diethylaminopropyne; symmetrical anhydrides method). Suitable cyclic amides are especially amides with five-membered diazacycles of aromatic nature, such as amides with imidazoles, for example imidazole (obtainable, for -26- Case 4-32905A/USN 00 oO Ci example, by treating the corresponding acid with N,N'-carbonyldiimidazole; imidazole method), or pyrazole, for example 3,5-dimethylpyrazole (obtainable, for example, via the acid hydrazide by treatment with acetylacetone; pyrazolide method). As mentioned, derivatives of carboxylic acids which are used as acylating agents can also be formed in situ. For example, N,N'-disubstituted amidino esters can be formed in situ by reacting the mixture of the starting material of formula I and the acid used as acylating agent in the presence of a suitable N,N'- Sdisubstituted carbodiimide, for example N,N'-dicyclohexylcarbodiimide or, especially, N-(3- O. dimethylaminopropyl)-N'-ethylcarbodiimide. Furthermore, amino or amido esters of the acids 00 Sused as acylating agent can be formed in the presence of the starting material of formula I to be acylated, by reacting a mixture of the corresponding acid and amino starting materials in the presence of an N,N'-disubstituted carbodiimide, for example N,N'dicyclohexylcarbodiimide, and of an N-hydroxyamine or N-hydroxyamide, for example Nhydroxysuccinimide, optionally in the presence of a suitable base, for example 4dimethylaminopyridine. Moreover, activation can be achieved in situ by reaction with N,N,N',N'-tetraalkyluronium compounds, such as O-benztriazol-1-yl-N,N,N',N'-tetra-methyluronium hexafluorophosphate, O-(1,2-dihydro-2-oxo- -pyridyl)-N,N,N',N'-tetramethyluronium tetrafluoroborate (in the absence or presence of 1,8-diazabicyclo[5.4.0]undec-7-eneor O-(3,4-dihydro-4-oxo-1,2,3-benztriazolin-3-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate. Finally, phosphoric acid anhydrides of the carboxylic acids can be prepared in situ by reacting an alkylphosphoric acid amide, such as hexamethylphosphoric acid triamide, in the presence of a sulfonic acid anhydride, such as 4-toluenesulfonic acid anhydride, with a salt, such as a tetrafluoroborate, for example sodium tetrafluoroborate, or with a different derivative of hexamethylphosphoric acid triamide, such as benzotriazol-1-yl-oxytris(dimethylamino)phosphonium hexafluoride, preferably in the presence of a racemisationreducing additive, such as N-hydroxybenztriazole. If desired, an organic base is added, preferably a tertiary amine, for example a tri-lower alkylamine, especially ethyldiisopropylamine or, more especially, triethylamine, and/or a heterocyclic base, for example 4-dimethylaminopyridine or, preferably, N-methylmorpholine or pyridine. The condensation is preferably carried out in an inert, aprotic, preferably anhydrous solvent or solvent mixture, for example in a carboxylic acid amide, for example formamide or dimethylformamide, a halogenated hydrocarbon, for example methylene chloride, carbon tetrachloride or chlorobenzene, a ketone, for example acetone, a cyclic ether, for example tetrahydrofuran or di- -27- Case 4-32905A/USN 00 oO Soxane, an ester, for example ethyl acetate, or a nitrile, for example acetonitrile, or in a mixture thereof, where appropriate at reduced or elevated temperature, for example in a temperature t range of from approximately -40 0 C to approximately +100 0 C, preferably from approximately to approximately +70 0 C, where arylsulfonyl esters are used also at approximately from S+100 0 C to +200 0 C, especially at temperatures of from 10 to 30 0 C, and, where appropriate, under an inert gas atmosphere, for example a nitrogen or argon atmosphere. Aqueous, for example alcoholic, solvents, e.g. ethanol, or aromatic solvents, e.g. benzene or toluene, are oO also possible.
A nitro group Z in a compound of formula I can be reduced to an amino group, for example by reduction with metals or selective hydrogenation; for example by reaction with magnesium/ammonium sulfate in a water/alcohol mixture, such as methanol/water, at elevated temperature, for example from 30 to 60 0 C (see Synth. Commun. 25(2), 4025-4028 (1995)); by reaction with zinc/borohydride in an acid amide, such as dimethylformamide, at temperatures below room temperature, for example at approximately 0°C; by reaction with 1,l'-dioctyl- 4,4'-bipyridinium dibromide/sodium tetrathionate/potassium carbonate in water/halogenated hydrocarbon mixtures, for example water/methylene chloride mixtures, at elevated temperature, for example from 25 to 35*C (see Tetrahedron Lett. 34(46), 7445-7446 (1993)); with sodium borohydride on Amberlyte IRA-400 ion exchanger in the chloride form in an alcohol, such as methanol/water, at preferred temperatures of from 0 to 40 0 C (see Synthetic Commun. 19(5/6), 805-811 (1989)); with potassium borohydride in a halogenated hydrocarbon/alcohol mixture, for example methylene chloride/methanol, at preferred temperatures of from 10 to 35 0 C (see Synthetic Commun. 19(17), 3047-3050 (1989)); with sodium borohydride in dioxane; with borane in tetrahydrofuran; by hydrogenation in the presence of Pd/C in an alcohol at a preferred temperature of from 0 to 35 0 C and in the presence of ammonium formate (see Tetrahedron Lett. 25(32), 3415-3418 (1989)); with titanium tetrachloride/lithium aluminium hydride or titanium tetrachloride/magnesium in an ether, such as tetrahydrofuran (see Bull. Chem. Soc. Belg. 97(1), 51-53 (1988)); or with ferric ammonium chloride/water at elevated temperature, preferably under reflux (Synth. Commun. 22, 3189- 3195 (1992)).
-28- Case 4-32905A/USN 00
O
C- In a compound of formula I wherein G is acyloxy-substituted lower alkyl and the other radicals are as defined for formula I, the acyl radical can be removed by hydrolysis, yielding the corresponding compound of formula I wherein G is hydroxy-substituted lower alkylene. The Shydrolysis is preferably carried out under customary conditions, for example in the presence of acids or bases, such as HCI or NaOH, in aqueous solution or in a suitable solvent or solvent mixture.
00 O, From a compound of formula I wherein G is acyloxy-substituted lower alkyl it is also possible Sto prepare a compound of formula I wherein G is lower alkylene. The reaction in that case is preferably carried out with catalytic hydrogenation (hydrogen in the presence of a suitable catalyst) in a customary solvent or solvent mixture.
General process conditions All the process steps mentioned in the present text can be carried out under reaction conditions which are known per se, preferably those mentioned specifically, in the absence or, customarily, in the presence of solvents or diluents, preferably those which are inert towards the reagents used and are solvents therefor, in the absence or presence of catalysts, condensing agents or neutralising agents, for example ion exchangers, such as cation exchangers, for example in the H' form, depending on the nature of the reaction and/or of the reactants at reduced, normal or elevated temperature, for example in a temperature range of from approximately -100 0 C to approximately 190 0 C, preferably from approximately -80°C to approximately 150 0 C, for example at from -80 to -60°C, at room temperature, at from -20 to 0 C or at the boiling point of the solvent used, under atmospheric pressure or in a closed vessel, where appropriate under pressure, and/or in an inert atmosphere, for example under an argon or nitrogen atmosphere.
In all starting materials and intermediate compounds, salts can be present where salt-forming groups are present. Salts can also be present during the reaction of such compounds, provided that the reaction is not impaired thereby.
At all stages of the reaction, isomeric mixtures that form can be separated into the individual isomers, for example diastereoisomers or enantiomers, or into any desired mixtures of isomers, for example racemates or diastereoisomeric mixtures, for example analogously to -29- Case 4-32905A/USN 00 oO Sthe methods described under "Additional process steps".
SIn certain cases, for example in the case of hydrogenations, it is possible to achieve stereoselective reactions so that, for example, it is easier to obtain individual isomers.
The solvents from which those that are suitable for a particular reaction can be selected include, for example, water, esters, such as lower alkyl lower alkanoates, for example diethyl acetate, ethers, such as aliphatic ethers, for example diethyl ether, or cyclic ethers, for ex- 00oO ample tetrahydrofuran, liquid aromatic hydrocarbons, such as benzene or toluene, alcohols, such as methanol, ethanol or 1- or 2-propanol, nitriles, such as acetonitrile, halogenated hydrocarbons, such as methylene chloride, acid amides, such as dimethylformamide, bases, such as heterocyclic nitrogen bases, for example pyridine, carboxylic acids, such as lower alkanecarboxylic acids, for example acetic acid, carboxylic acid anhydrides, such as lower alkanoic acid anhydrides, for example acetic anhydride, cyclic, linear or branched hydrocarbons, such as cyclohexane, hexane or isopentane, or mixtures of those solvents, for example aqueous solutions, unless indicated otherwise in the description of the processes. Such solvent mixtures can also be used in working up, for example by chromatography or partitioning.
The invention relates also to those forms of the process in which a compound obtainable as an intermediate at any stage is used as starting material and the remaining steps are carried out, or the process is interrupted at any stage, or a starting material is formed under the reaction conditions or is used in the form of a reactive derivative or salt, or a compound obtainable by the process according to the invention is produced under the process conditions and is processed further in situ. There are preferably used those starting materials which lead to the compounds described above as being preferred, especially as being especially preferred, more especially preferred and/or very especially preferred.
The preparation of compounds of formula I (or N-oxides thereof) is preferably carried out analogously to the processes and process steps mentioned in the Examples.
The compounds of formula I (or N-oxides thereof), including their salts, can also be obtained in the form of hydrates, or their crystals can include, for example, the solvent used for crystallisation (presence in the form of solvates).
Case 4-32905A/USN 00 SPharmaceutical compositions, methods and uses SThe present invention relates also to pharmaceutical compositions which comprise a compound of formula I (or an N-oxide thereof) as active ingredient and can be used especially Sin the treatment of the diseases mentioned at the beginning. Special preference is given to compositions for enteral, such as nasal, buccal, rectal or, especially, oral, and parenteral, such as intravenous, intramuscular or subcutaneous, administration to warm-blooded animals, O especially human beings. The compositions comprise the active ingredient on its own or, 0 preferably, together with a pharmaceutically acceptable carrier. The dose of active ingredient Sdepends on the disease to be treated and on the species, its age, weight and individual Scondition, individual pharmacokinetic data and on the mode of administration.
The invention relates also to pharmaceutical compositions for use in a method of treating the human or animal body prophylactically or, especially, therapeutically, to a process for their preparation (especially in the form of compositions for the treatment of tumours) and to a method of treating the above-mentioned diseases, especially tumour diseases, more especially those mentioned above.
The invention relates also to processes, and to the use of compounds of formula I (or an Noxide thereof), for the preparation of pharmaceutical compositions comprising compounds of formula I (or an N-oxide thereof) as active component (active ingredient).
Preference is given to a pharmaceutical composition which is suitable for administration to a warm-blooded animal, especially a human being or a commercially useful mammal, which is suffering from a disease characterized by an aberrant MAP kinsase signaling pathway especially, a tumour disease, most particularly melanoma, comprising a compound of formula I (or an N-oxide thereof), or a pharmaceutically acceptable salt thereof where salt-forming groups are present, in an amount that is effective in inhibiting RAF kinase, particularly a mutant RAF kinase, together with at least one pharmaceutically acceptable carrier.
Preference is given also to a pharmaceutical composition for the prophylactic or, especially, therapeutic treatment of tumour diseases and other proliferative diseases in a warm-blooded animal, especially a human being or a commercially useful mammal, which requires such -31 Case 4-32905A/USN 00 C1 treatment, especially which is suffering from such a disease, comprising a novel compound of formula I (or an N-oxide thereof), or a pharmaceutically acceptable salt thereof, as active r ingredient in an amount that is effective prophylactically or, especially, therapeutically against the mentioned diseases.
Pharmaceutical compositions comprise from approximately I to approximately 95 active Singredient, dosage forms that are in single dose form preferably comprising from 00 approximately 20 to approximately 90 active ingredient, and dosage forms that are not in Ssingle dose form preferably comprising from approximately 5 to approximately 20 active ingredient. Unit dose forms are, for example, drag6es, tablets, ampoules, vials, suppositories or capsules. Other dosage forms are, for example, ointments, creams, pastes, foams, tinctures, lipsticks, drops, sprays, dispersions, etc.. Examples are capsules comprising from approximately 0.05 g to approximately 1.0 g of the active ingredient.
The pharmaceutical compositions of the present invention are prepared in a manner known per se, for example by means of conventional mixing, granulating, confectioning, dissolving or lyophilising processes.
Solutions of the active ingredient are preferably used, in addition also suspensions or dispersions, especially isotonic aqueous solutions, dispersions or suspensions, which, in the case of, for example, lyophilised compositions which contain the active substance alone or together with a carrier, for example mannitol, can be prepared prior to use. The pharmaceutical compositions may be sterilised and/or comprise excipients, for example preservatives, stabilisers, wetting agents and/or emulsifiers, solubilisers, salts for regulating the osmotic pressure and/or buffers, and are prepared in a manner known per se, for example by means of conventional dissolving or lyophilising processes. The mentioned solutions or suspensions may comprise viscosity-increasing substances, such as sodium carboxymethylcellulose, carboxymethylcellulose, dextran, polyvinylpyrrolidone or gelatin, or solubilisers, for example Tween 80 [polyoxyethylene(20)sorbitan monooleate; trade mark of ICI Americas, Inc, USA].
-32- Case 4-32905A/USN 00 oO C Suspensions in oil comprise as the oily component the vegetable, synthetic or semi-synthetic oils customary for injection purposes. There may be mentioned as such especially liquid fatty acid esters, which comprise as the acid component a long-chained fatty acid having from 8 to S22, especially from 12 to 22, carbon atoms, for example lauric acid, tridecylic acid, myristic acid, pentadecylic acid, palmitic acid, margaric acid, stearic acid, arachidic acid, behenic acid or corresponding unsaturated acids, for example oleic acid, elaidic acid, erucic acid, brassidic Sacid or linoleic acid, optionally with the addition of antioxidants, for example vitamin E, 1- 00 carotene or 3,5-di-tert-butyl-4-hydroxytoluene. The alcohol component of those fatty acid esters has a maximum of 6 carbon atoms and is a mono- or poly-hydric, for example mono-, di- or tri-hydric, alcohol, for example methanol, ethanol, propanol, butanol or pentanol or their isomers, but especially glycol and glycerol. Examples of fatty acid esters which may be mentioned are, therefore: ethyl oleate, isopropyl myristate, isopropyl palmitate, "Labrafil M 2375" (polyoxyethyleneglycerol trioleate from Gattefoss6, Paris), "Labrafil M 1944 CS" (unsaturated polyglycolised glycerides prepared by alcoholysis of apricot kernel oil and composed of glycerides and polyethylene glycol ester; Gattefoss6, France), "Labrasol" (saturated polyglycolised glycerides prepared by alcoholysis of TCM and composed of glycerides and polyethylene glycol ester; Gattefoss6, France) and/or "Miglyol 812" (triglyceride of saturated fatty acids having a chain length of from C 8 to C 1 2 from Hiils AG, Germany), but especially vegetable oils, such as cottonseed oil, almond oil, olive oil, castor oil, sesame oil, soybean oil and, more especially, groundnut oil.
The preparation of the injection compositions is carried out in customary manner under sterile conditions, as are also the introduction thereof, for example, into ampoules or vials and the sealing of the containers.
Pharmaceutical compositions for oral administration can be obtained, for example, by combining the active ingredient with one or more solid carriers, granulating a resulting mixture, where appropriate, and processing the mixture or granules, if desired, where appropriate by addition of additional excipients, to tablets or drag6e cores.
Suitable carriers are especially fillers, such as sugars, for example lactose, saccharose, mannitol or sorbitol, cellulose preparations and/or calcium phosphates, for example tricalcium -33- Case 4-32905A/USN 00 N phosphate or calcium hydrogen phosphate, also binders, such as starches, for example corn, wheat, rice or potato starch, methylcellulose, hydroxypropylmethylcellulose, sodium carboxymethylcellulose and/or polyvinylpyrrolidone, and/or, if desired, disintegrators, such as the above-mentioned starches, also carboxymethyl starch, crosslinked polyvinylpyrrolidone, alginic acid or a salt thereof, such as sodium alginate. Additional excipients are especially flow conditioners and lubricants, for example silicic acid, talc, stearic acid or salts thereof, Ssuch as magnesium or calcium stearate, and/or polyethylene glycol, or derivatives thereof.
00 SDrag6e cores can be provided with suitable, optionally enteric, coatings, there being used inter alia concentrated sugar solutions which may contain gum arabic, talc, polyvinylpyrrolidone, polyethylene glycol and/or titanium dioxide, or coating solutions in suitable organic solvents or solvent mixtures or, for the preparation of enteric coatings, solutions of suitable cellulose preparations, such as acetylcellulose phthalate or hydroxypropylmethylcellulose phthalate. Colourings or pigments may be added to the tablets or drag6e coatings, for example for identification purposes or to indicate different doses of active ingredient.
Pharmaceutical compositions for oral administration are also hard gelatin capsules and soft sealed capsules consisting of gelatin and a plasticiser, such as glycerol or sorbitol. The hard gelatin capsules may contain the active ingredient in the form of granules, for example in admixture with fillers, such as corn starch, binders and/or glidants, such as talc or magnesium stearate, and optionally stabilisers. In soft capsules the active ingredient is preferably dissolved or suspended in suitable liquid excipients, such as fatty oils, paraffin oil or liquid polyethylene glycols or fatty acid esters of ethylene glycol or propylene glycol, it likewise being possible to add stabilisers and detergents, for example of the polyoxyethylenesorbitan fatty acid ester type.
Suitable rectally administrable pharmaceutical compositions are, for example, suppositories that consist of a combination of the active ingredient with a suppository base. Suitable suppository bases are, for example, natural or synthetic triglycerides, paraffin hydrocarbons, polyethylene glycols or higher alkanols.
-34- Case 4-32905A/USN 00
O
c1 For parenteral administration there are suitable, especially, aqueous solutions of an active c3 ingredient in water-soluble form, for example in the form of a water-soluble salt, or aqueous cinjection suspensions that comprise viscosity-increasing substances, for example sodium carboxymethylcellulose, sorbitol and/or dextran and, if desired, stabilisers. The active ingre- Sdient, optionally together with excipients, can also be in the form of a lyophilisate and can be made into a solution prior to parenteral administration by the addition of suitable solvents.
00 Solutions used, for example, for parenteral administration can also be used as infusion 0solutions.
Preferred preservatives are, for example, antioxidants, such as ascorbic acid, or microbicides, such sorbic acid or benzoic acid.
The invention relates especially to a process or a method for treating one of the pathological conditions that is characterized by an aberrant MAP kinase signaling pathway, especially a disease responsive to inhibition ofRAF kinase, especially a corresponding tumour disease.
The compounds of formula I (or an N-oxide thereof) can be administered prophylactically or therapeutically as such or in the form of pharmaceutical compositions, preferably in an amount that is effective against the mentioned diseases, to a warm-blooded animal, for example a human being, requiring such treatment, the compounds being used especially in the form of pharmaceutical compositions. In the case of a body weight of approximately 70 kg, a daily dose of from approximately 0.1 g to approximately 5 g, preferably from approximately g to approximately 2 g, of a compound of the present invention is administered.
The preferred dosage, composition and preparation of pharmaceutical formulations (medicaments) to be used in each particular case are described above.
Starting materials The starting materials used and the reaction conditions chosen are preferably such that the compounds mentioned as being preferred are obtained.
The starting materials of formulae II and 1111 are known, can be prepared by processes known Case 4-32905A/USN 00 rC per se, or are available commercially; in particular, they can be prepared by processes a analogous to those mentioned in the Examples.
SIn the preparation of starting materials, any functional groups present that are not to take part in the reaction may be in protected form, if necessary. Preferred protecting groups, their introduction and their removal are described under process a) or in the Examples. Instead of O the starting materials and intermediates in question, it is also possible to react salts thereof N where salt-forming groups are present and the reaction in question is also possible using a Ssalt. Therefore, any reference hereinbefore and hereinafter to starting materials is also C intended to include their salts, where expedient and possible.
Compounds of formula II wherein G is -CH 2
-CH
2 -CH2-NH-, oxa, thia or -NR- and the other symbols are as defined for formula I can be prepared, for example, by reacting a compound of formula IV
O
HN Z)m (IV)
L*
wherein L* is a nucleofugal leaving group, especially halo, such as bromo, and m and Z and the bonds indicated by wavy lines are as defined for a compound of formula I (especially m 0, i.e. Z is not present the corresponding compound of formula IV wherein L* is bromo is available commercially from SPECS BIOSPECS, Rijskwijk, Holland), with a compound of formula V
A=B
G-H (V) D-E
Q),
wherein G is -CH 2
-CH
2 or -CH 2 or is oxa, thia or and A, B, D, E, T, Q and r are as defined for compounds of formula I, preferably under conditions analogous to those mentioned under process a) for the reaction of a compound of formula II with a compound of formula III, or with palladium complex catalysis with Pdo, for example with -36- Case 4-32905A/USN 00 NC tetrakis(triphenylphosphinyl)palladium complexes, palladium(0)-P(o-tolyl) 3 complexes, palladium(0) complexes with chelating bis(phosphines) (see, for example, J. Org. Chem. 61.
7240-7241 (1996)) or the like, preferably with Pdo in the presence of an alkali metal carbonate, such as K 2 CO3, in a suitable solvent, such as toluene, at elevated temperature, preferably under reflux. There is then obtained a compound of formula II* 0
HN
00 A=B
(II*)
T G G
D-E
wherein m and Z and the bonds indicated by wavy lines, and A, B, D, E, T, Q and r are as defined for a compound of formula I, and wherein G is -CH 2
-CH
2 or -CH 2 or is oxa, thia or -NR-.
The corresponding compound of formula II can be prepared therefrom by introduction of a nucleofugal group L, as defined for formula II, using a corresponding acid anhydride, for example phosphoryl chloride (POCI3) for the introduction of L Cl or a different reagent mentioned below for the conversion of a compound of formula XII into a compound of formula II.
The starting materials of formulae IV and V are known, can be prepared by processes known per se, or are available commercially.
A compound of formula II wherein G is methylene and the other symbols are as defined for a compound of formula I can be prepared, for example, by reacting a lactone of formula VI 0 Ot
(VI)
wherein Z and m are as defined for a compound of formula I, with an alkali metal cyanide, especially potassium cyanide, at elevated temperature, for example at from 100°C to 200°C (see Org. Synthesis, Coll. Vol. 3, 174), yielding a cyanomethylbenzoic acid of formula VII -37- Case 4-32905A/USN 00 0 CN O HOZ)
(VII)
NC
wherein the radicals are as defined for formula VI; the compound of formula VII is then con- Sverted into the lower alkyl ester, for example by adding a suitable di-lower alkylformamide Sdi-lower alkylacetyl, such as dimethylformamide dimethylacetyl, to the compound of formula SVII in a suitable solvent, for example a halo-lower alkane, such as dichloromethane, and 00 stirring the mixture to complete the reaction, preferably at temperatures of from 0 to 60°C, for CI example at approximately room temperature. The corresponding lower alkyl ester of formula VIII is obtained 0 Alk-O Z)
(VII)
NCtla_ wherein Alk is lower alkyl, especially methyl, and the other radicals are as defined for formula VI. The ester is then reacted in a suitable solvent, for example an ether, such as tetrahydrofuran, or an ester, such as ethyl propionate, or mixtures thereof, with an aldehyde of formula IX
A=B
N CHO (IX) D-E )r wherein A, B, D, E, Q and r are as defined for a compound of formula I, in the presence of an alcohol, such as methanol, and of the corresponding alcoholate, such as an alkali metal methanolate, for example sodium methanolate, at a temperature of preferably from 0 C to reflux temperature, preferably at approximately from 5 to 30°C, yielding the compound of formula X -38- Case 4-32905A/USN 00
O
C 0 SHO Z)m
NC
A (X)
D
wherein the radicals A, B, D, E, Q and Z and the indices r and m are as defined for a com- 00 pound of formula I; that compound is converted (under conditions analogous to those for the Spreparation of the lower alkyl ester of formula VIII) into the corresponding lower alkyl ester of formula XI 0 Alk-O
Z),
NC
I
(XI)
A N. D E wherein Alk is lower alkyl, especially methyl, and the other radicals are as defined for formula X. Subsequent hydrogenation in the presence of a suitable catalyst, especially a framework catalyst, such as Raney cobalt or, especially, Raney nickel, in a suitable solvent, such as an ether, for example tetrahydrofuran, or an alcohol, such as methanol, or mixtures thereof, at preferred temperatures of from 10 to 80 0 C, at pressures of from 0.5 to 100 bar, especially approximately at normal pressure, yields an isoquinoline compound of formula XII 0 HN (1 Z)m
(XII)
r(xn)
B
S),
N
DE
wherein the radicals A, B, D, E, Q and Z and the indices r and m are as defined for a compound of formula I.
-39- Case 4-32905A/USN 00 oO N, The compound of formula XII is then converted into the corresponding compound of formu- Sla II, or a salt thereof, by means of a suitable reagent for the introduction of the nucleofugal leaving group, for example a phosphoryl halide or phosphorus pentahalide, especially phos- Sphoryl chloride (POCI3) or phosphorus pentachloride, without a solvent or in a suitable solvent, for example acetonitrile, in the absence or, preferably, in the presence of a corresponding acid, for example of a hydrohalic acid, such as hydrochloric acid, at preferred tempera- Stures of from 40 0 C to reflux temperature, preferably at approximately from 40 to 60 0
C.
00 SIn an analogous manner, it is possible using compounds analogous to those of formula IX wherein, however, the place of the -CHO- group is taken by a corresponding lower alkanealdehyde group, via compounds analogous to those of formulae X to XII wherein the place of the methylidene group (formula X, XI) or of the methylene group (formula XII) is taken by a corresponding lower alkylidene or lower alkylene group, to prepare corresponding compounds of formula II wherein G is lower alkylene.
The other starting materials are known, can be prepared by processes known per se, or are available commercially, or, in particular, can be prepared by processes analogous to those mentioned in the Examples.
The Examples which follow serve to illustrate the invention without limiting the scope thereof.
Synthesis Examples Example S 1: 1-(3,5-Dimethylanilino)-4-I(pyridin-4-yl)-methvll-isoquinoline N-(3,5-dimethyl-phenyl)-4-(pyridin-4-yl-methyl)-isoquinolin-l-vyll-amine) With the exclusion of moisture, 100 mg (0.825 mmol) of 3,5-dimethyl-aniline are dissolved in 4 ml of ethanol, and 196 pl (0.784 mmol) of HCl (4N in dioxane) are added. After the addition of 200 mg (0.785 mmol) of l-chloro-4-[(pyridin-4-yl)-methyl]-isoquinoline, the mixture is heated for 8 hours at 90 0 C. Concentration by evaporation is then carried out; the residue is taken up in 4 ml of water, 1 ml of saturated ammonia solution and 20 ml of CH 2 Cl 2 and the organic phase is separated off, dried with Na 2
SO
4 (anhydrous) and concentrated by evapo- Case 4-32905A/USN 00
O
CI ration again. Column chromatography (SiO 2 ethyl acetate/hexane 3:1) and crystallisation from ethyl acetate/hexane yield the title compound: m.p. 156-158 0 C; FAB-MS: Anal. calc. (C 23
H
21
N
3 0.1 H 2 0) C 80.95 H 6.26 N 12.31 %;found C 80.9 H 6.2 N 12.4 SThe starting material is prepared as follows: 0Sla) 2-Cvanomethvl-benzoic acid methyl ester 00 With gentle heating, 175 g (1.08 mol) of 2-cyanomethyl-benzoic acid (for preparation see: 0Org. Synthesis, Coll, Vol. 3, 174) are dissolved in 1.7 litres of CH 2
CI
2 242 ml (90 1.6 mol) of dimethylformamide dimethylacetal are added dropwise at room temperature, and stirring is carried out for 38 hours to complete the reaction. The reaction mixture is washed with 2 x 1.2 litres of saturated NaHCO 3 solution and brine. The aqueous phases are extracted using 2 portions of CH 2
CI
2 and the organic phases are dried (Na 2
SO
4 and concentrated by evaporation. Column chromatography (SiO 2 ethyl acetate/hexane 1:4, applied in ethyl acetate/hexane/CH 2 Cl2) yields the title compound: m.p. 49-50 0 C Anal. calc. (C 10
H
9 N0 2
C
68.56 H 5.18 N 8.00 %;found C 68.5 H 5.1 N 7.9 Slb) 2-1(1-Cvano-2-(pvridin-4-vl)-vinvll-benzoic acid With the exclusion of air, 127.7 ml (1.35 mol) of pyridine-4-carbaldehyde (Fluka, Buchs, Switzerland) are added to a solution of 215.6 g (1.23 mol) of 2-cyanomethyl-benzoic acid methyl ester in 1.8 litres of THF. The mixture is cooled to 8-9 0 C, 297 ml (1.6 mol) of a 5.4M solution of sodium methanolate in methanol are added dropwise in the course of 20 minutes, and the mixture is stirred for 1.5 hours at from 10 to 15 0 C. The mixture is then adjusted to pH using approximately 350 ml of 4N HCI and is then stirred for one hour at 5 0 C. The title compound crystallises out and is filtered off with suction and washed thoroughly with THF/water 2:1 and THF: m.p. 218-219 0 C; FAB-MS: Anal. calc. (Ci 5
H
0
N
2 0 2
C
71.99 H 4.03 N 11.19 %;found C 71.9 H 4.1 N 11.1 Sic) 2-[(1-Cyano-2-(pyridin-4-vl)-vinvll-benzoic acid methyl ester With the exclusion of moisture, 211 g (0.843 mol) of 2-[(1-cyano-2-(pyridin-4-yl)-vinyl]-benzoic acid are suspended in 3.3 litres of CH 2 C1 2 169 ml (-90 1.1 mol) of dimethylform- -41 Case 4-32905A/USN 00 C1 amide dimethylacetal (Fluka, Buchs, Switzerland) are added at room temperature, and stirring is carried out for 22 hours to complete the reaction. The reaction mixture is filtered, and the r- residue is washed thoroughly with CH 2 C1 2 and discarded. Concentration of the filtrate by evaporation, chromatography (SiO 2 ethyl acetate) and crystallisation from ethyl acetate/he- Sxane yield the title compound: m.p. 102-104 0 C; FAB-MS: Anal. calc.
(CI
6
H
2
N
2 0 2 C 72.72 H 4.58 N 10.60 %;found C 72.7 H 4.8 N 10.5 00 S d) 4-(Pvridin-4-vl-methyl)-2H-isoquinolin-l-one 0 In the presence of 5 x 40 g of Raney nickel (added at intervals), 163 g (617 mmol) of cyano-2-(pyridin-4-yl)-vinyl]-benzoic acid methyl ester are hydrogenated in 3 litres of THF at 0 C for 90 hours. The reaction mixture is filtered, and the filtrate is concentrated by evaporation and crystallised from acetonitrile/ethyl acetate title compound). Further product can be obtained from the mother liquor by chromatography (SiO 2 ethyl acetate-+acetone): m.p.
189-190 0 C; FAB-MS: Anal. calc. (C 1 5
H
12
N
2 0 .0.05 H 2 0) C 75.96 H 5.14 N 11.81 %;found C 75.8 H 5.2 N 11.9 S e) l-Chloro-4-(pvridin-4-vlmethvl)-isoauinoline With the exclusion of air, 32.7 g (139 mmol) of 4-(pyridin-4-yl-methyl)-2H-isoquinolin-1-one are made into a slurry in 560 ml of acetonitrile, and 69.2 ml (277 mmol) of 4N HCI in dioxane and 31.7 ml (346 mmol) of POCl3 are added. The mixture is stirred for 22 hours at 50 0 C and then cooled in an ice bath, and a solution of 128.6 g of NaHCO 3 in 1.64 litres of water is added in the course of 30 minutes. During the addition, first a clear solution forms and then the title compound precipitates and, after 15 minutes, can be filtered off, washed thoroughly with water and ether and dried under a high vacuum at 60°C: m.p. 119-120°C; FAB-MS: Example S2: 1-(3-Chlorobenzvlamino)-4-l(pyridin-4-vl)-methyll-isoauinoline With the exclusion of moisture, 1.6 ml (13.1 mmol) of 3-chlorobenzylamine and 800 mg (3.14 mmol) of 1-chloro-4-(pyridin-4-ylmethyl)-isoquinoline (Example le) are stirred for 2 hours at 150°C. The mixture is suspended in ethyl acetate, 1 ml of concentrated ammonia solution is added, washing with water and brine is carried out, and the organic phase is dried -42- Case 4-32905A/USN 00
O
Ni (Na 2
SO
4 and concentrated by evaporation. Column chromatography (SiO 2 ethyl acetate) F1 yields the title compound: m.p. 141-142 0 C; FAB-MS: Anal. calc.
(C
22 Hi 8
N
3 C1) C 73.43 H 5.04 N 11.68 Cl 9.85 %;found C 73.2 H 5.1 N 11.6 Cl 9.9 Example S3: 1-(4-t-butvlanilino)-4-(pvridin-4-l)-methvll-isouinoline 0With the exclusion of moisture, 27.5ml (172.7 mmol) of 4-t-butyl-aniline and 7.0 g (27.5 00 mmol) of 1-chloro-4-(pyridin-4-ylmethyl)-isoquinoline (Example e) are stirred for 3 hours at 0 C under a nitrogen blanket. The mixture is then cooled and partitioned between 5% (w/v) NaHCO 3 and ethyl acetate. The ethyl acetate phase is dried over MgSO 4 and evaporated. Flash chromatography (silica gel, 50% ethyl acetate/hexane) followed by crystallization from hexane in a dry ice/isopropyl alcohol bath yields 8.6 g of a light yellow powder, m.p. 157-159 0 C; Anal. calc. C 81.71 H 6.86 N 11.43 %;found C 81.88 H 6.85 N 11.43 Biological Examples Active B-Raf, C-Raf, and V599E B-Raf proteins of human sequence are purified from insect cells using the baculoviral expression system. Raf inhibition is tested in 96-well microplates coated with IKB-a and blocked with Superblock. The phosphorylation of IcB-a at Serine 36 is detected using a phospho-IiB-a specific antibody (Cell Signaling #9246), an anti-mouse IgG alkaline phosphatase conjugated secondary antibody (Pierce 31320), and an alkaline phosphatase substrate, ATTOPHOS (Promega, #S101).
Each of the following compounds inhibits wild-type C-RAF at an ICso of from 0.01 to micromoles/liter and/or wild-type B-RAF at an IC5o of from 0.03 to 3.7 micromoles/liter and/or mutant B-RAF (V599E) at an ICso of from 0.01 to 3.4 micromoles/liter.
Melting MS Example point No. -43 Case 4-32905A/USN 00 ~K1Melting MIS Example point (M+H)4' No. 0 c) 1.ci182-183 346 Cl~aNH 00 c-K1 Inc AA1 00 -44- Case 4-32!O5AIUSN C.1Melting
MIS
Example point No. (c) 4. 146-148 340 00~
NN
c-K 5.158-159 354 Case 4-32905A/USN F 7 Example No. Melting point
MS
.4.
1* I~aNH N~ N
NI
118-1191 354 W4-145 340 N~
N
N
11.143-145 354 ya
NH
NIN
N
00 -46- Case 4-32905A/USN CK1Melting
MS
Example point No. 12. 149-150 452 I aNH 00 N c-K1 13.
-47- Case 4-32905A/USN 00 Melting MIS Example point No. 0 c) 16. Br167-168 404/406
N
00 -48 Case 4-32905A/USN 00 CK1Melting MS Example point (M+H)w ctNo.__ 19. 81 N N 00 00-49- Case 4-32905A1USN Melting MIS Example point No. Br__ 0 0) _9 22. B 1
NH
N N 00 Case 4-32905A1USN 00 Melting MS Example point No. 418/420 Br a NH 00 7
N
-51 -51- Case 4-32905A/USN IMelting MIS Example point No. IQ 1 89-92 *1* F F 412 I F .1.
52 Case 4-32905A/USN Melting MS Example point No. (CC) 31. 369 N NH
N
N
32. F 410 0-
F
HN
N
33. 332 53- Case 4-32905A/USN 00 CK1Melting
MIS
Example point No. ec) 34. F 444 0
N
00 c-I Nlj -54- Case 4-32905A1USN 00 Melting Mis cIExample point No. C 0 C) 34 37.34
HN
N
00 N7 355 5 -Case 4-32905A/USN 00 00 Melting MIS Example point No. 0 c) 41. 394
HN
N
N
NI 42. C= 337
HN
N N -56 Case 4-32905A/USN 00 Melting MIS Example point No. (C 44 369
N
000 00 N -57 Case 4-32905A/USN 00 (NiMelting
MIS
Example point No. en__ (C 48. 384 7N
HN
00
~N+
CK1 'QQ 58 Case 4-32905A/USN 00 Melting MS Example point No. 51. 382
HN
00 o4
N
2 QA 59- Case 4-32905A/USN 00 ~~IMelting MIS Example point No. (c) 404
HN..
F
00N Case 4-32905N/USN 00 CK1Melting
MIS
Example point No. enC 59. 386
NH
N
00 S N 369 -61- -1-Case 4-32!O5N/USN Melting MIS Example point (M+H)y No. 0 c) 62. 433 N H
NN~-
00 63.35
HN
N
62 Case 4-32905A/USN 00 Melting MS Example point No. 0 c) 387
HN""I
00 63- Case 4-32905A/USN Melting MIS 00 Example point No. eA) 38 69.38 IaNH N
N
00/ N C -64- Case 4-32905A/USN Melting MS Example point (M+H) No. 72. 384
NH
N
KY OH Example D1 Detection of T1796A Mutation in the Human B-Raf Gene Detection Primer: GATTTTGGTCTAGCTACAGA Second Primer: GACTTTCTAGTAACTCAGCAG Genomic DNA is isolated from human cells from a melanoma cell line using a GENELUTE mammalian genomic DNA kit (Sigma cat G1N 350). PCR reactions are carried out on a PCR machine (MJ Research, Model PTC100) in a total volume of microL using the PCR Core kit by Roche (cat 1578 553). The PCR reaction mixture contains 5 microL of 10X reaction buffer,1 microL of 10 mM dNTPs, 100-10OOng of template DNA, 0.5 microL Taq polymerase (2.5-5 units), 1 microL of a 31 uM stock of each primer.
The PCR conditions are as follows: 3minutes 94 0 C 1 minutes 30 second Cycles Case 4-32905A/USN 00
O
0 172°C 1minutes S72 0 C lOminutes 4 0
C
0 0 After amplification, 8 microLs of the PCR reaction mixture is mixed with 2 microLs of O nucleic acid sample loading buffer [BioRad cat #161-0767]. The 10 microL sample is loaded 00 onto a 1.5% agarose [GIBCO-BRL cat 15510-027] gel that contains 0.3 ug/ml of ethidium 0 bromide [Pierce cat #17898]. Molecular weight standards [100 bp DNA ladder from Invitrogen cat 10380-012] are loaded in an adjacent lane. The DNA is separated by electrophoresis in TAE buffer (0.04 M Tris-acetate, 0.01 M EDTA. 0.02M glacial acetic acid pH8.4)[Roche cat #1666690]. Electrophoresis conditions are 120 volts for 30-40 minutes.
After separation, the gel is exposed to UV light and a picture taken on a Alphalmager2000 documentation system.
Generally, two bands are detected in the gel. The faster migrating band runs ahead of the 100 bp marker and represents the primers. The DNA that results from the T1796A mutant specific PCR amplification has a predicted size of 152 bp and migrates between the 100 bp standard and the 200bp standard as predicted. The PCR amplification product is confirmed by sequencing. The presence of the PCR amplification product demonstrates that the TI 796A mutation is present in the template DNA. The absence of the PCR amplification product is evidence that the mutation is absent in the tissue sample.
Other B-RAF mutations are detected by this method utilizing the detection primer and second primer indicated for the mutation in the following tables: SEQ ID Detection primer B-RAF NO: oligonucleotide segment mutation 1 ACAGTGGGACAAAGAATTGA G1388A 2 ACAGTGGGACAAAGAATTGT G1388T 3 GGACAAAGAATTGGATCTGC G1394C -66- 66-Case 4-32905N/USN 00 4 GGACAAAGAATTGGATCTGA G1394A GGACAAAGAATTGGATCTGT G1394T 6 ATrGGATCTGGATCATTTGC G1403C 7 ATTGGATCTGGATCATTGA G1403A 8 GAGTAATAATATATTTCTTCAT G1753A
A
9 CAGTAAAAATAGGTGATTTG T1782G 10 CAGTAAAAATAGGTGATT=fC G1783C 11I GTAAAAATAGGTGATTTTGGTG C1786G 12 GTAAAAATAGGTGATTTTGGTC T1787G
G
13 GAT'IIGGTCTAGCTACAGA T1796A 14 GATITGGTCTAGCTACAGAT TG1796-97AT SEQ EID Second Primer B-RAF NO: oligonucleotide segment mutation TGTCACCACATTACATACTTAC G1388A
C
16 TGTCACCACATTACATACTTAC G1388T
C
17 TGTCACCACATTACATACTTAC G1394C
C
18 TGTCACCACATTACATACTTAC G1394A
C
19 TGTCACCACATTACATACTTAC G1394T
C
TGTCACCACATTACATACTTAC G1403C
C
21 TGTCACCACATTACATACTTAC G1403A
C
-67- Case 4-32905A/USN 22 23 24 26 27 28
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
GACTTTCTAGTAACTCAGCAG
G1753A T1782G G1783C C1786G T1787G T1796A TG1796-97AT These examples are intended to further describe, but not limit, this invention.
Throughout this specification and the claims which follow, unless the context requires otherwise, the word "comprise", and variations such as "comprises" and "comprising", will be understood to imply the inclusion of a stated integer or step or group of integers or steps but not the exclusion of any other integer or step or group of integers or steps.
The reference in this specification to any prior publication (or information derived from it), or to any matter which is known, is not, and should not be taken as an acknowledgment or admission or any form of suggestion that that prior publication (or information derived from it) or known matter forms part of the common general knowledge in the field of endeavour to which this specification relates.
Claims (15)
1. A method of treating a patient having a disease characterized by excessive signaling through the MAP kinase signaling pathway, which comprises administering to the patient an C effective RAF kinase inhibiting amount of a compound of formula (I) 00 X N- (CHR)- Y N- A=B Z)m (I) T( G (&Gk D-E Q), wherein r is from 0 to 2; n is from 0 to 2; m is from 0 to 4; A, B, D, E and T are each independently of the others N or CH, with the proviso that at least one, but not more than three, of A, B, D, E and T are N; G is lower alkylene, -CH 2 -CH 2 -CH 2 -S02-, oxa thia or or is lower alkylene substituted by acyloxy, oxo, halogen or hydroxy. Q is lower alkyl, especially methyl; R is H or lower alkyl; X is Y, oxa or thio; preferably -NH-; Y is H, unsubstituted or substituted lower alkyl, aryl, heteroaryl or unsubstituted or substituted cycloalkyl; and Z is amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, etherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenylsulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl or -69- Case 4-32905A/USN 00 Nalkylphenylsulfonyl, and where, if more than one radical Z is present (m the substituents Z are identical or different; ct or an N-oxide or a pharmaceutically acceptable salt thereof.
2. Use of a a compound of formula (I) O SN (CHR)n Y 0 A =B T/ G T\ D-E Q), wherein r is from 0 to 2; n is from 0 to 2; m is from 0 to 4; A, B, D, E and T are each independently of the others N or CH, with the proviso that at least one, but not more than three, of A, B, D, E and T are N; G is lower alkylene, -CH 2 -CH 2 -CH 2 -SO 2 oxa thia or or is lower alkylene substituted by acyloxy, oxo, halogen or hydroxy. Q is lower alkyl, especially methyl; R is H or lower alkyl; X is Y, oxa or thio; preferably -NH-; Y is H, unsubstituted or substituted lower alkyl, aryl, heteroaryl or unsubstituted or substituted cycloalkyl; and Z is amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, etherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenylsulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl or alkylphenylsulfonyl, and where, if more than one radical Z is present (m the substituents Z are identical or different; Case 4-32905A/USN 00 C1 or an N-oxide or a pharmaceutically acceptable salt thereof, for the preparation of a medicament for the treatment of a disease characterized by excessive signaling through the MAP kinase signaling pathway.
3. A method or use according to claim I or 2 respectively wherein r is from 0 to 2; n is 0 or i; 00 m is 0 orl; A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N, or A, B, E and T are CH and D is N, or A, T, D and E are CH and B is N; particularly wherein A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N. G is lower alkylene, -CH 2 -CH 2 hydroxymethylene or benzoyloxy-methylene; Q is methyl; R is H or lower alkyl; X is oxa or thia; Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of amino; lower alkanoylamino; halogen; unsubstituted or substituted lower alkyl; hydroxy; lower alkoxy; phenyl-lower alkoxy; cyano, lower alkenyl, Cs-Cl2alkoxy, lower alkoxycarbonyl, carbamoyl, lower alkylcarbamoyl, lower alkanoyl, phenyloxy, halo-lower alkyloxy, lower alkoxycarbonyl, lower alkylmercapto, halo-lower alkylmercapto, hydroxy-lower alkyl, such, lower alkanesulfonyl, halo-lower alkanesulfonyl, ,phenylsulfonyl and lower alkylenedioxy bonded to two adjacent carbon atoms or wherein two adjacent positions are substituted by alkylene or alkenylene to form a 5 to 7 membered ring that is fused to the phenyl ring; Z is amino; N-lower alkylamino; hydroxy-lower alkylamino; phenyl-lower alkylamino; N,N- di-lower alkylamino; N-phenyl-lower alkyl-N-lower alkylamino; N,N-di-lower alkylphenylamino; lower alkanoylamino; benzoylamino and phenyl-lower alkoxycarbonylamino, wherein the phenyl radical in each case is unsubstituted or substituted by nitro, amino, halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl, carbamoyl, 2-hydroxyethylamino, benzyloxycarbonylamino or bromine. -71- Case 4-32905A/USN 00 O O CN 4. A method or use according to claim 1 or 2 respectively wherein r is 0; n is 0; m is 0; B, D, E and T are CH and A is N or A, B, D and E are each CH and T is N; G is lower alkylene; SX is -NH-; 00 Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of halogen and lower alkyl. A method or use according to claim 1 or 2 respectively wherein r is O; n is from 0 to 2; m is 0; A, B, D and E are each CH and T is N; G is methylene; Ris H; X is -NR; and Y is phenyl that is unsubstituted or substituted by halogen, lower alkyl, lower alkoxy or cyclo- hexyl that is unsubstituted or substituted by lower alkyl.
6. A method or use according to claim 1 or 2 respectively wherein ris 0; n is 0; m is 0; A, B, D and E are each CH and T is N; G is methylene; X and Y is phenyl that is substituted by one or two identical or different substituents selected from halogen and lower alkyl. 72 Case 4-32905A/USN 00 O C1 7. A method or use according to claim 6 wherein Y is phenyl that is substituted in the 4- position by t-butyl. t--
8. A method or use according to claim 6 wherein Y is phenyl that is substituted in the 4- position by trifluoromethyl. S9. A method or use according to claim 1 or 2 respectively wherein the disease characterized 0O by excessive signaling through the MAP kinase signaling pathway is a cancer. 0O A method or use according to claim 9 wherein the cancer is a melanoma, a colorectal cancer, an ovarian cancer, a glioma, an adenocarcinoma, a sarcoma, a breast cancer and a liver cancer.
11. A method or use according to claim 10 wherein the cancer is a melanoma.
12. A method of treating melanoma in a patient, which comprises comprises testing melanoma tissue from the patient to determine whether the melanoma tissue expresses mutant RAF kinase or overexpresses a wild-type RAF kinase and treating the patient if the melanoma tissue is found to overexpress a wild type RAF kinase or express an activating mutant B-RAF kinase with an effective RAF kinase inhibiting amount of a compound of formula (I) x-Y TX/ N -G(CHR)- Y G D-E Q)r wherein r is from 0 to 2; n is from 0 to 2; m is from 0 to 4; -73- Case 4-32905A/USN 00 Ci A, B, D, E and T are each independently of the others N or CH, with the proviso that at least one, but not more than three, of A, B, D, E and T are N; G is lower alkylene, -CH 2 -CH 2 -CH 2 -SO 2 oxa thia or or is Slower alkylene substituted by acyloxy, oxo, halogen or hydroxy. Q is lower alkyl, especially methyl; R is H or lower alkyl; O X is Y, oxa or thio; preferably -NH-; c Y is H, unsubstituted or substituted lower alkyl, aryl, heteroaryl or unsubstituted or 00 Ssubstituted cycloalkyl; and Z is amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, etherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenylsulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl or alkylphenylsulfonyl, and where, if more than one radical Z is present (m the substituents Z are identical or different; or an N-oxide or a pharmaceutically acceptable salt thereof.
13. Use of a compound of formula (I) X- N/ (CHR), Y A=B Z) D-E Q), wherein r is from 0 to 2; n is from 0 to 2; m is from 0 to 4; A, B, D, E and T are each independently of the others N or CH, with the proviso that at least one, but not more than three, of A, B, D, E and T are N; -74- Case 4-32905A/USN 00 C G is lower alkylene, -CH 2 -CH 2 -CH 2 -SO 2 oxa thia or or is lower alkylene substituted by acyloxy, oxo, halogen or hydroxy. Q is lower alkyl, especially methyl; R is H or lower alkyl; X is Y, oxa or thio; preferably -NH-; Y is H, unsubstituted or substituted lower alkyl, aryl, heteroaryl or unsubstituted or Ssubstituted cycloalkyl; and 00 Z is amino, mono- or di-substituted amino, halogen, alkyl, substituted alkyl, hydroxy, Setherified or esterified hydroxy, nitro, cyano, carboxy, esterified carboxy, alkanoyl, carbamoyl, N-mono- or N,N-di-substituted carbamoyl, amidino, guanidino, mercapto, sulfo, phenylthio, phenyl-lower alkylthio, alkylphenylthio, phenylsulfinyl, phenyl-lower alkylsulfinyl, alkylphenylsulfinyl, phenylsulfonyl, phenyl-lower alkanesulfonyl or alkylphenylsulfonyl, and where, if more than one radical Z is present (m 2 the substituents Z are identical or different; or an N-oxide or a pharmaceutically acceptable salt thereof, for the preparation of a medicament for the treatment of melanoma which comprises comprises testing melanoma tissue from the patient to determine whether the melanoma tissue expresses mutant RAF kinase or overexpresses a wild-type RAF kinase and treating the patient if the melanoma tissue is found to overexpress a wild type RAF kinase or express an activating mutant B-RAF kinase with an effective RAF kinase inhibiting amount of a compound of formula I.
14. A method or use according to claim 12 or 13 respectively wherein r is from 0 to 2; n is 0 or 1; m is 0 orl; A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N, or A, B, E and T are CH and D is N, or A, T, D and E are CH and B is N; particularly wherein A, B, D and E are each CH and T is N, or A, D and E are each CH and B and T are N. G is lower alkylene, -CH 2 -CH 2 hydroxymethylene or benzoyloxy-methylene; Q is methyl; R is H or lower alkyl; Case 4-32905A/USN 00 0 C X is oxa or thia; Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of amino; lower alkanoylamino; halogen; unsubstituted or substituted lower alkyl; hydroxy; lower alkoxy; phenyl-lower alkoxy; cyano, lower alkenyl, Cs-C 12 alkoxy, lower alkoxycarbonyl, carbamoyl, lower alkylcarbamoyl, lower alkanoyl, phenyloxy, halo-lower alkyloxy, lower alkoxycarbonyl, lower alkylmercapto, halo-lower alkylmercapto, hydroxy-lower alkyl, such, lower alkanesulfonyl, halo-lower alkanesulfonyl, 0, phenylsulfonyl and lower alkylenedioxy bonded to two adjacent carbon atoms or wherein 00 two adjacent positions are substituted by alkylene or alkenylene to form a 5 to 7 membered ring that is fused to the phenyl ring; Z is amino; N-lower alkylamino; hydroxy-lower alkylamino; phenyl-lower alkylamino; N,N- di-lower alkylamino; N-phenyl-lower alkyl-N-lower alkylamino; N,N-di-lower alkylphenylamino; lower alkanoylamino; benzoylamino and phenyl-lower alkoxycarbonylamino, wherein the phenyl radical in each case is unsubstituted or substituted by nitro, amino, halogen, amino, N-lower alkylamino, N,N-di-lower alkylamino, hydroxy, cyano, carboxy, lower alkoxycarbonyl, lower alkanoyl, carbamoyl, 2-hydroxyethylamino, benzyloxycarbonylamino or bromine. A method or use according to claim 12 or 13 respectively wherein ris 0; n is O; m is 0; B, D, E and T are CH and A is N or A, B, D and E are each CH and T is N; G is lower alkylene; X is -NH-; Y is phenyl that is unsubstituted or substituted by one or two identical or different substituents selected from the group consisting of halogen and lower alkyl.
16. A method or use according to claim 12 or 13 respectively wherein r is O; n is from 0 to 2; m is 0; -76- Case 4-32905A/USN 00 oO C- A, B, D and E are each CH and T is N; a G is methylene; R is H; 0 X is-NR; and Y is phenyl that is unsubstituted or substituted by halogen, lower alkyl, lower alkoxy or cyclo- i hexyl that is unsubstituted or substituted by lower alkyl. C
17. A method or use according to claim 12 or 13 respectively wherein oO S r is O; n is O; m is 0; A, B, D and E are each CH and T is N; G is methylene; X and Y is phenyl that is substituted by one or two identical or different substituents selected from halogen and lower alkyl.
18. A method or use according to claim 17 wherein Y is phenyl that is substituted in the 4- position by t-butyl.
19. A method or use according to claim 12 or 13 respectively wherein the melanoma expresses a mutant RAF kinase. A method or use according to claim 19 wherein the mutant RAF kinase corresponds to a mutation in the B-RAF kinase gene selected from G1388A, G1388T, G1394C, G1394A, G1394T, G1403C, G1403A, G1753A, T1782G, G1783C, C1786G, T1787G, T1796A and TG 1796-97AT.
21. A method or use according to claim 18 the melanoma expresses a mutant RAF kinase.
22. A method or use according to claim 21 wherein the mutant RAF kinase is a V599E mutation. 32905 Seq SEQUENCE LISTING 0 S<110> Novartis AG <120> Method of Treatment c <130> 4-32905A r- <160> 28 <170> PatentIn version 3.2 <210> 1 <211> S <212> DNA <213> HomO sapiens S <400> 1 00 acagtgggac aaagaattga 2 <210> 2 <211> <212> DNA <213> Homo sapiens <400> 2 acagtgggac aaagaattgt <210> 3 <211> <212> DNA <213> Homo sapiens <400> 3 ggacaaagaa ttggatctgc <210> 4 <211> <212> DNA <213> Homo sapiens <400> 4 ggacaaagaa ttggatctga <210> <211> <212> DNA <213> Homo sapiens <400> 5 ggacaaagaa ttggatctgt <210> 6 <211> <212> DNA <213> Homo sapiens <400> 6 attggatctg gatcatttgc <210> 7 <211> Page 1 oo <21> DNA3205 seq <213> HOMO sapiens cI <400> 7 2 attggatctg gatcatttga 2 <210> 8 <211> 23 C) <212> DNA <213> HOMO sapiens <400> 8 2 gagtaataat atatttcttc ata 2 <210> 9 cI <211> oc <212> DNA <213 HOMO sapiens cI <400> 9 2 cagtaaaaat aggtgatttg 2 <210> <211> 21 <212> DNA <213> HOMO sapiens <400> 10 2 cagtaaaaat aggtgatttt c 2 <210> 11 <211> 22 <212> DNA <213> HOMO sapiens <400> 11 2 gtaaaaatag gtgattttgg tg 2 <210> 12 <211> 23 <212> DNA <213> HOMO sapiens <400> 12 2 gtaaaaatag gtgattttgg tcg 2 <210> 13 <211> <212> DNA <213> HOMO sapiens <400> 13 2 gattttggtC tagctacaga 2 <210> 14 <211> 21 <212> DNA <213> Homo sapiens <400> 14 2 gattttggtc tagctacaga t 21e 32905 seq 00 <210> ci<211> 23 <212> DNA S<213> Homo sapiens S<400> 15 2 tgtcaccaca ttacatactt acc 2 <210> 16 <211> 23 r, <212> DNA S<213> HOMO sapiens C) <400> 16 2 N-K tgtcaccaca ttacatactt acc 2 00 S<210> 17 ci <211> 23 <212> DNA <213> HOMO sapiens <400> 17 2 tgtcacCaca ttacatactt acc 2 <210> 18 <211> 23 <212> DNA <213> HOMO sapiens <400> 18 2 tgtcaccaca ttacatactt acc 2 <210> <211> 23 <212> DNA <213> HOMO sapiens <400> 19 2 tgtcaccaca ttacatactt acc 2 <210> <211> 23 <212> DNA <213> HOMO sapiens <400> 20 2 tgtcaccaca ttacatactt acc 2 <210> 21 <211> 23 <212> DNA <213> HOMO sapiens <400> 21 2 tgtcaccaca ttacatactt acc 2 <210> 22 <211> 21 <212> DNA Page 3 32905 seq <213> HOMO sapiens 00 S<400> 22 2 Sgactttctag taactcagca g 2 ct <210> 23 S<211> 21 <212> DNA <213> HOMO sapiens <400> 23 2 gactttctag taactcagca g 2 S<210> 24 S<211> 21 S <212> DNA S <213> HOMO sapiens 00 S <400> 24 2 gactttctag taactcagca g 2 <210> <211> 21 <212> DNA <213> HOMO sapiens <400> 25 2 gactttctag taactcagca g 2 <210> 26 <211> 21 <212> DNA <213> HOMO sapiens <400> 26 2 gactttctag taactcagca g 2 <210> 27 <211> 21 <212> DNA <213> Homo sapiens <400> 27 2 gactttctag taactcagca g 2 <210> 28 <211> 21 <212> DNA <213> HOMO sapiens <400> 28 2 gactttctag taactcagca g 2 Page 4
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AU2008200070A AU2008200070A1 (en) | 2003-03-11 | 2008-01-07 | Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases |
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AU2004218914A AU2004218914A1 (en) | 2003-03-11 | 2004-03-10 | Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases |
AU2008200070A AU2008200070A1 (en) | 2003-03-11 | 2008-01-07 | Use of isoquinoline derivatives for treating cancer and MAP kinase related diseases |
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