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Electron backscatter diffraction (EBSD) as a tool for detection of coral diagenesis

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Abstract

Fine-scale structures of intact modern and fossil coralline skeletons were analysed to determine alteration to secondary cements and phases using electron backscatter diffraction (EBSD). EBSD analysis revealed secondary aragonite cements in endolithic borings in the modern skeleton and whole dissepiments of the fossil skeleton replaced by calcite, despite X-ray diffraction (XRD) bulk analysis of the general area suggesting only aragonite was present. Non-destructive, in situ screening of coral samples by EBSD analysis provides a valuable tool for assessing the extent of alteration and can determine which areas may produce more reliable climate proxy data.

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References

  • Adams BL, Wright SI, Kunze K (1993) Orientation imaging - the emergence of a new microscopy. Metall Mater Trans A 24:819–831

    Article  Google Scholar 

  • Alam MN, Blackman M, Pashley DW (1954) High-angle kikuchi patterns. Proc R Soc Lond A 221:224–242

    Article  CAS  Google Scholar 

  • Allison N, Finch AA (2004) High-resolution Sr/Ca records in modern Porites lobata corals: effects of skeletal extension rate and architecture. G-cubed 5:Q05001. doi:05010.01029/02004GC000696

  • Allison N, Finch AA, Newville M, Sutton SR (2005) Strontium in coral aragonite: 3. Sr coordination and geochemistry in relation to skeletal architecture. Geochim Cosmochim Acta 69:3801–3811

    Article  CAS  Google Scholar 

  • Allison N, Finch AA, Webster JM, Clague DA (2007) Palaeoenvironmental records from fossil corals: the effects of submarine diagenesis on temperature and climate estimates. Geochim Cosmochim Acta 71:4693–4703

    Article  CAS  Google Scholar 

  • Cartwright JHE, Checa AG (2006) The dynamics of nacre self-assembly. J R Soc Interface 4:491–504

    Article  CAS  Google Scholar 

  • Chappell J (1974) Geology of coral terraces, Huon-Peninsula, New-Guinea - study of Quaternary tectonic movements and sea-level changes. Bull Geol Soc Am 85:553–570

    Article  Google Scholar 

  • Charles CD, Cobb KM, Moore MD, Fairbanks RG (2003) Monsoon-tropical ocean interaction in a network of coral records spanning the 20th century. Mar Geol 201:207–222

    Article  Google Scholar 

  • Cobb KM, Charles CD, Cheng H, Edwards RL (2003) El Niño southern oscillation and tropical Pacific climate during the last millennium. Nature 424:271–276

    Article  PubMed  CAS  Google Scholar 

  • Cohen AL, McConnaughey TA (2003) Geochemical perspectives on coral mineralization. In: Dove PM, De Yoreo JJ, Weiner S (eds) Biomineralization. Rev Mineral Geochem 54:151–187

  • Cohen AL, Owens KE, Layne GD, Shimizu N (2002) The effect of algal symbionts on the accuracy of Sr/Ca paleotemperatures from coral. Science 296:331–333

    Article  PubMed  CAS  Google Scholar 

  • Cohen AL, Smith SR, McCartney MS, van Etten J (2004) How Brain Corals Record Climate: An Integration of Skeletal Structure, Growth and Chemistry in Diploria labyrinthiformis on Bermuda. Mar Ecol Prog Ser 271:147–158

    Article  CAS  Google Scholar 

  • Cole JE (2003) Holocene coral records: windows on tropical climate variability. In: Mackay A, Battarbee R, Birks J, Oldfield F (eds) Global change in the Holocene. Arnold, London, pp 168–184

    Google Scholar 

  • Constantz BR, Meike A (1989) Calcite centers of calcification in Mussa angulosa (Scleractinia). In: Crick RE (ed) Origin, evolution and modern aspects of biomineralization in plants and animals. Plenum Press, New York, pp 201–207

    Google Scholar 

  • Correge T (2006) Sea surface temperature and salinity reconstruction from coral geochemical tracers. Palaeogeogr Palaeoclimatol Palaeoecol 232:408–428

    Article  Google Scholar 

  • Cusack M, Pérez-Huerta A, Dalbeck P (2007) Common crystallographic control in calcite biomineralization of bivalved shells. Cryst Eng Comm 9:1215–1218

    CAS  Google Scholar 

  • Cusack M, England J, Parkinson D, Dalbeck P, Lee M, Curry GB, Fallick AE (2008) Oxygen isotope composition, magnesium distribution and crystallography of Terebratulina retusa. Fossils & Strata 54:259–267

    Google Scholar 

  • Dalbeck P, Cusack M (2006) Crystallography (electron backscatter diffraction) and chemistry (electron probe microanalysis) of the avian eggshell. Crystal Growth and Design 6:2558–2562

    Article  CAS  Google Scholar 

  • Dalbeck P, England J, Cusack M, Lee MR, Fallick AE (2006) Crystallography and chemistry of the calcium carbonate polymorph switch in M. edulis shells. Eur J Mineral 18:601–609

    Article  CAS  Google Scholar 

  • Dingley DJ (1981) A comparison of diffraction techniques for the SEM. Scanning Electron Microscopy 4:273–286

    Google Scholar 

  • Dingley DJ (1984) Diffraction from sub-micron areas using electron backscattering in a scanning electron-microscope. Scanning Electron Microscopy 11:569–575

    Google Scholar 

  • Dingley DJ, Razavizadeh N (1981) The use of Kossel diffraction in the SEM for precision crystallographic studies in metallurgy, mineralogy and semiconductor-materials. Scanning Electron Microscopy 4:287–294

    CAS  Google Scholar 

  • England J, Cusack M, Dalbeck P, Perez-Huerta A (2007) Comparison of the crystallographic structure of semi nacre and nacre by electron backscatter diffraction. Crystal Growth and Design 7:307–310

    Article  CAS  Google Scholar 

  • Esat TM, McCulloch MT, Chappell J, Pillans B, Omura A (1999) Rapid fluctuations in sea level recorded at Huon Peninsula during the penultimate deglaciation. Science 283:197–201

    Article  PubMed  CAS  Google Scholar 

  • Evans MN, Fairbanks RG, Rubenstone JL (1998) A proxy index of ENSO teleconnections. Nature 394:732–733

    Article  CAS  Google Scholar 

  • Fallon SJ, White JC, McCulloch MT (2002) Porites corals as recorders of mining and environmental impacts: Misima Island, Papua New Guinea. Geochim Cosmochim Acta 66:45–62

    Article  CAS  Google Scholar 

  • Felis T, Pätzold J (2003) Climate records from corals. In: Wefer GLF, Mantoura F (eds) Marine science frontiers for Europe. Springer-Verlag, Berlin, pp 11–27

    Google Scholar 

  • Gabitov RI, Cohen AL, Gaetani GA, Holcomb M, Watson EB (2006) The impact of crystal growth rate on element ratios in aragonite: an experimental approach to understanding vital effects. Geochim Cosmochim Acta 70:A187

    Article  Google Scholar 

  • Gaetani GA, Cohen AL (2004) Experimental investigation of the partitioning of Mg2+, Ca2+, Sr2+, and Ba2+ between aragonite and seawater at 5 to 45°C. Geochim Cosmochim Acta 68:A209

    Google Scholar 

  • Gaetani GA, Cohen AL (2006a) Calculating paleotemperatures from the elemental composition of coral skeleton: a new approach to old proxies. Geochim Cosmochim Acta 70:A187

    Article  Google Scholar 

  • Gaetani GA, Cohen AL (2006b) Element partitioning during precipitation of aragonite from seawater: a framework for understanding paleoproxies. Geochim Cosmochim Acta 70:4617–4634

    Article  CAS  Google Scholar 

  • Gagan MK, Ayliffe LK, Beck JW, Cole JE, Druffel ERM, Dunbar RB, Schrag DP (2000) New views of tropical paleoclimates from corals. Quaternary Sci Rev 19:4564

    Article  Google Scholar 

  • Grottoli AG, Eakin M (2007) A review of coral δ18O and Δ14C proxy records. Earth Sci Rev 81:67–91

    Article  Google Scholar 

  • Guilderson TP, Fairbanks RG, Rubenstone JL (1994) Tropical temperature variations since 20,000 years ago - modulating interhemispheric climate-change. Science 263:663–665

    Article  PubMed  Google Scholar 

  • Guilderson TP, Fairbanks RG, Rubenstone JL (2001) Tropical Atlantic coral oxygen isotopes: glacial–interglacial sea surface temperatures and climate change. Mar Geol 172:75–89

    Article  CAS  Google Scholar 

  • Hendy EJ, Gagan MK, Lough JM, McCulloch M, deMenocal PB (2007) Impact of skeletal dissolution and secondary aragonite on trace element and isotopic climate proxies in Porites corals. Paleoceanography 22:PA4101. doi:4110.1029/2007PA001462

  • Hughen KA, Schrag DP, Jacobsen SB, Hantoro W (1999) El Nino during the last interglacial period recorded by a fossil coral from Indonesia. Geophys Res Lett 26:3129–3132

    Article  Google Scholar 

  • Jenkins R, Snyder RL (1996) Introduction to X-ray powder diffractometry. Wiley, New York

    Google Scholar 

  • Kinsman DJJ, Holland HD (1969) Co-precipitation of cations with CaCO3 IV. Co-precipitation of Sr2+ with aragonite between 16 and 96°C. Geochim Cosmochim Acta 33:1–18

    Article  CAS  Google Scholar 

  • Kuhnert H, Crüger T, Pätzold J (2005) NAO signature in a Bermuda coral Sr/Ca record, G-cubed 6:Q04004. doi:10.1029/2004GC000786

  • Mahway E (2005) OIM user’s manual. EDAX-TSL, New Jersey

    Google Scholar 

  • Maier C, Felis T, Patzold J, Bak RPM (2004) Effect of skeletal growth and lack of species effects in the skeletal oxygen isotope climate signal within the coral genus Porites. Mar Geol 207:193–208

    Article  CAS  Google Scholar 

  • Marriott CS, Henderson GM, Crompton R, Staubwasser M, Shaw S (2004) Effect of mineralogy, salinity, and temperature on Li/Ca and Li isotope composition of calcium carbonate. Chem Geol 212:5–15

    Article  CAS  Google Scholar 

  • Meibom A, Stage M, Wooden J, Constantz BR, Dunbar RB, Owen A, Grumet N, Bacon CR, Chamberlain CP (2003) Monthly strontium/calcium oscillations in symbiotic coral aragonite: biological effects limiting the precision of the paleotemperature proxy. Geophys Res Lett 30. doi:10.1029/2002GL016864

  • Meibom A, Cuif JP, Hillion FO, Constantz BR, Juillet-Leclerc A, Dauphin Y, Watanabe T, Dunbar RB (2004) Distribution of magnesium in coral skeleton. Geophys Res Lett 31:L23306. doi:23310.21029/22004GL021313

  • Meibom A, Yurimoto H, Cuif JP, Domart-Coulon I, Houlbreque F, Constantz B, Dauphin Y, Tambutte E, Tambutte S, Allemand D, Wooden J, Dunbar R (2006) Vital effects in coral skeletal composition display strict three-dimensional control. Geophys Res Lett 33:L11608. doi:10.1029/2006GL025968

  • Meibom A, Mostefaoui S, Cuif JP, Dauphin Y, Houlbreque F, Dunbar R, Constantz B (2007) Biological forcing controls the chemistry of reef-building coral skeleton. Geophys Res Lett 34:L02601. doi:10.1029/2006GL028657

  • Meibom A, Cuif J-P, Houlbreque F, Mostefaoui S, Dauphin Y, Meibom KL, Dunbar R (2008) Compositional variations at ultra-structure length-scales in coral skeleton. Geochim Cosmochim Acta 72:1555–1569

    Article  CAS  Google Scholar 

  • Mitsuguchi T, Matsumoto E, Uchida T (2003) Mg/Ca and Sr/Ca ratios of Porites coral skeleton: evaluation of the effect of skeletal growth rate. Coral Reefs 22:381–388

    Article  Google Scholar 

  • Mucci A, Canuel R, Zhong SJ (1989) The solubility of calcite and aragonite in sulfate-free seawater and the seeded growth-kinetics and composition of the precipitates at 25°C. Chem Geol 74:309–320

    Article  CAS  Google Scholar 

  • Muller A, Gagan MK, McCulloch MT (2001) Early marine diagenesis in corals and geochemical consequences for paleoceanographic reconstructions. Geophys Res Lett 28:4471–4474

    Article  CAS  Google Scholar 

  • Nishikawa S, Kikuchi S (1928a) Diffraction of cathode rays by mica. Nature 121:1019–1020

    Article  CAS  Google Scholar 

  • Nishikawa S, Kikuchi S (1928b) Diffraction of cathode rays by calcite. Nature 122:726–726

    Article  CAS  Google Scholar 

  • Nothdurft LD, Webb GE, Bostrom T, Rintoul L (2007) Calcite-filled borings in the most recently deposited skeleton in live-collected Porites (Scleractinia): implications for trace element archives. Geochim Cosmochim Acta 71:5423–5438

    Article  CAS  Google Scholar 

  • Nowell MM, Witt RA, True B (2005) EBSD sample preparation: techniques tips and tricks. Micros Microanal 11:504–505

    Google Scholar 

  • Perez-Huerta A, Cusack M, England J (2007) Crystallography and diagenesis in fossil craniid brachiopods. Palaeontology 50:757–763

    Article  Google Scholar 

  • Prior DJ, Boyle AP, Brenker F, Cheadle MC, Day A, Lopez G, Peruzzo L, Potts GJ, Reddy S, Spiess R, Timms NE, Trimby P, Wheeler J, Zetterstrom L (1999) The application of electron backscatter diffraction and orientation contrast imaging in the SEM to textural problems in rocks. Am Mineral 84:1741–1759

    CAS  Google Scholar 

  • Quinn TM, Taylor FW (2006) SST artifacts in coral proxy records produced by early marine diagenesis in a modern coral from Rabaul, Papua New Guinea. Geophys Res Lett 33:L04601. doi:10.1029/2005GL024972

  • Schmahl WW, Griesshaber E, Neuser R, Lenze A, Job R, Brand U (2004) The microstructure of the fibrous layer of terebratulide brachiopod shell calcite. Eur J Mineral 16:693–697

    Article  CAS  Google Scholar 

  • Schwartz AJ (2000) Electron backscatter diffraction in materials science. Plenum Press, New York

    Google Scholar 

  • Schwarzer RA (1997a) Advances in crystal orientation mapping with the SEM and TEM. Ultramicroscopy 67:19–24

    Article  CAS  Google Scholar 

  • Schwarzer RA (1997b) Automated crystal lattice orientation mapping using a computer-controlled SEM. Micron 28:249–265

    Article  CAS  Google Scholar 

  • Tudhope AW, Shimmield GB, Chilcott CP, Jebb M, Fallick AE, Dalgleish AN (1995) Recent changes in climate in the far western equatorial Pacific and their relationship to the southern oscillation; oxygen isotope records from massive corals, Papua New Guinea. Earth Planet Sci Lett 136:575–590

    Article  CAS  Google Scholar 

  • Tudhope AW, Lea DW, Shimmield GB, Chilcott CP, Head S (1996) Monsoon climate and Arabian Sea coastal upwelling recorded in massive corals from southern Oman. Palaios 11:347–361

    Article  Google Scholar 

  • Tudhope AW, Chilcott CP, McCulloch MT, Cook ER, Chappell J, Ellam RM, Lea DW, Lough JM, Shimmield GB (2001) Variability in the El Niño - Southern oscillation through a glacial-interglacial cycle. Science 291:1511–1517

    Article  PubMed  CAS  Google Scholar 

  • Urban FE, Cole JE, Overpeck JT (2000) Influence of mean climate change on climate variability from a 155-year tropical Pacific coral record. Nature 407:989–993

    Article  PubMed  CAS  Google Scholar 

  • Vandermeule JH, Watabe N (1973) Studies on reef corals.1. Skeleton formation by newly settled planula larva of Pocillopora-damicornis. Mar Biol 23:47–57

    Article  Google Scholar 

  • Venables JA, Harland CJ (1973) Electron backscattering patterns - new technique for obtaining crystallographic information in scanning electron-microscope. Phil Mag A 27:1193–1200

    Article  CAS  Google Scholar 

  • Wilson RA, Tudhope AW, Brohan P, Briffa KR, Osborn TJ, Tett SBF (2006) 250-years of reconstructed and modeled tropical temperatures. J Geophys Res 111:C10007. doi:10010.11029/12005JC003188

  • Woodroffe CD, Gagan MK (2000) Coral microatolls from the central Pacific record late Holocene El Niño. Geophys Res Lett 27:1511–1514

    Article  Google Scholar 

  • Wright SI, Adams BL (1991) Automated lattice orientation determination from electron backscatter kikuchi diffraction patterns. Texture Microstruct 14:273–278

    Article  Google Scholar 

  • Wright SI, Adams BL (1992) Automatic-analysis of electron backscatter diffraction patterns. Metall Mater Trans A 23:759–767

    Article  Google Scholar 

  • Wright SI, Gray GT, Rollett AD (1994) Textural and microstructural gradient effects on the mechanical-behavior of a Tantalum plate. Metall Mater Trans A 25:1025–1031

    Article  Google Scholar 

  • Zhong SJ, Mucci A (1989) Calcite and aragonite precipitation from seawater solutions of various salinites - precipitation rates and overgrowth compositions. Chem Geol 78:283–299

    Article  CAS  Google Scholar 

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Acknowledgements

The authors all gratefully acknowledge financial support from the Leverhulme Trust (F/100179/X) and UK Natural Environment Research Council (NER/T/S2002/00443 and GR3/12021). John Gilleece is thanked for his assistance in sample preparation, Peter Chung for valuable assistance in EBSD and SEM analyses and Robert McDonald for assistance with XRD. This work is in keeping with the aims of Theme 3 of the Scottish Alliance for Geoscience, Environment and Society (SAGES).

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Correspondence to M. Cusack.

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Communicated by Geology Editor Dr. Bernhard Riegl

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Cusack, M., England, J., Dalbeck, P. et al. Electron backscatter diffraction (EBSD) as a tool for detection of coral diagenesis. Coral Reefs 27, 905–911 (2008). https://doi.org/10.1007/s00338-008-0414-3

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