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A rapid method for developing chlorophyll equations using alternative solvents: DMF (N,N-dimethylformamide)

  • Methodology
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Abstract

Acetone although very good as a spectroscopic solvent is often found to be an unsatisfactory extractant of chlorophylls from photosynthetic organisms and hence often seriously underestimates chlorophyll content. Unfortunately, although spectroscopic equations for organisms with chlorophyll a + b are available in some other solvents, suitable equations for organism with different chlorophyll profiles are often not available and are very labour-intensive and need a lot of expertise to obtain. DMF (N,N-dimethylformamide) is a very good extractant of chlorophylls. DMF is more toxic than DMSO (dimethyl sulphoxide) but it offers the same advantages of very low volatility and limited flammability but has a much lower freezing point. We describe a simple method to obtain usable chlorophyll equations in DMF solvent using available Acetone-based formulae as benchmarks. The workings for the development of the equations is shown so the same appoach can be used for other solvents. The relative errors of the equations are all about ± 2% (see Table).

  

Absorption coefficients (mg L−1 cm−1) in DMF solvent

Pigment Composition

Chlorophyll

630 nm

647 nm

664 nm

691 nm

Chl a only

Chl a

  

11.12 (± 0.150)

 

Chl a + b

Chl a

 

–2.223 (± 0.0523)

12.42 (± 0.270)

 
 

Chl b

 

23.45 (± 0.552)

–5.73 (± 0.125)

 

Chl a + c2

Chl a

–0.657 (± 0.00921)

 

11.47 (± 0.1188)

 
 

Chl c2

27.80 (± 0.390)

 

–3.64 (± 0.0377)

 

Chl a + c1c2

Chl a

-0.538 (± 0.0168)

 

10.85 (± 0.159)

 
 

Chl c1 + c2

32.77 (± 1.021)

 

-3.53 (± 0.0516)

 

Chl d + a

Chl d

  

–0.1296 (± 0.00191)

11.74 (± 0.1694)

 

Chl a

  

11.43 (± 0.1654)

–1.731 (± 0.0255)

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Data availability

The graphs of the spectrophotometric data used for the project are included in the Supplementary Material. The data as EXCEL files are available upon request.

References

  • Allen MM (1973) Methods for cyanobacteria. In: Stein JR (ed) Handbook of Phycological methods: culture methods and growth measurement. Cambridge University Press, Cambridge, pp 127–138

    Google Scholar 

  • Arnon DI (1949) Copper enzymes in isolated chloroplasts. Polyphenoloxidase in Beta vulgaris. Plant Physiol 24:1–15

    CAS  PubMed  Google Scholar 

  • Blank MM (1992) Determination of chlorophyll using DMSO. Viticult Enolog Sci 47:32–35

    Google Scholar 

  • Frigaard N-U, Larsen KL, Cox RP (1996) Spectrochromatography of photosynthetic pigments as a fingerprinting technique for microbial phototrophs. FEMS Microbiol Ecol 20:69–77

    Article  CAS  Google Scholar 

  • Humphrey GF, Jeffrey SW (1997) Test of accuracy of spectrophotometric equations for the simultaneous determination of chlorophylls a, b, c1 and c2. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton Pigments in Oceanography: Guidelines to Modern Methods. UNESCO, Paris, pp 616–621

    Google Scholar 

  • Inskeep WP, Bloom PR (1984) Extinction coefficients of chlorophyll a and b in N,N-dimethylformamide and 80% acetone. Plant Physiol 77:483–485

    Article  Google Scholar 

  • Jeffrey SW, Humphrey GF (1975) New spectrophotometric equations for determining chlorophylls a, b, c1 and c2 in higher plants, algae and natural phytoplankton. Biochem Physiol Pflanz 167:191–194

    Article  CAS  Google Scholar 

  • Jeffrey SW, Welschmeyer NA (1997) Spectrophotometric and fluorometric equations in common use in oceanography. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton Pigments in Oceanography: Guidelines to Modern Methods. UNESCO, Paris, pp 597–615

    Google Scholar 

  • Larkum AW, Scaramuzzi C, Cox GC, Hiller RG, Turner AG (1994) Light-harvesting chlorophyll c-like pigment in Prochloron. Proc Nat Acad Sci 91:679–683

  • Li Y, Cai ZL, Chen M (2013) Spectroscopic properties of chlorophyll f. J Phys Chem B 117:11309–11317

    Article  CAS  PubMed  Google Scholar 

  • Li Y, Scales N, Blankenship RE, Willows RD, Chen M (2012) Extinction coefficient for red-shifted chlorophylls: Chlorophyll d and chlorophyll f. Biochim Biophys Acta 1817:1292–1298

    Article  CAS  PubMed  Google Scholar 

  • Lichtenthaler HK, Wellburn AR (1983) Determinations of total carotenoids and chlorophylls a and b of leaf extracts in different solvents. Biochem Soc Trans 11:591–592

    Article  CAS  Google Scholar 

  • MacKinney G (1941) Absorption of light by chlorophyll solutions. J Biol Chem 140:315–322

    Article  CAS  Google Scholar 

  • McLachlan J (1973) Growth media – marine. In: Stein JR (ed) Handbook of phycological methods: culture methods and growth measurements. Cambridge University Press, Cambridge, pp 25–51

    Google Scholar 

  • Moran R (1982) Formulae for determination of chlorophyllous pigments extracted with N,N-dimethylformamide. Plant Physiol 69:1376–1381

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Moran R, Porath D (1980) Chlorophyll determination in intact tissues using N,N-dimethylformamide. Plant Physiol 65:478–479

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Nichols HW (1973) Growth Media – freshwater. In: Stein JR (ed) Handbook of Phycological methods: culture methods and growth measurements. Cambridge University Press, Cambridge, pp 7–24

    Google Scholar 

  • Porra RJ (1990) A simple method for extracting chlorophylls from the recalcitrant alga, Nannochloris atomus, without formation of spectroscopically-different magnesium-rhodochlorin derivatives. Biochim Biophys Acta -Bioenergetics 1019:137–141

    Article  CAS  Google Scholar 

  • Porra RJ (2006) Spectrometric assays for plant, algal and bacterial chlorophylls. In: Grimm B, Porra RJ, Rüdiger W, Scheer H (eds) Chlorophylls and Bacteriochlorophylls: Biochemistry, Biophysics, Functions and Applications. Springer, Dordrecht, pp 95–107

    Chapter  Google Scholar 

  • Porra RJ, Scheer H (2019) Towards a more accurate future for chlorophyll a and b determinations: the inaccuracies of Daniel Arnon’s assay. Photosynth Res 140:215–219

    Article  CAS  PubMed  Google Scholar 

  • Porra RJ, Thompson WA, Kriedemann PE (1989) Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim Biophys Acta 975:384–394

    Article  CAS  Google Scholar 

  • Ritchie RJ (2006) Consistent sets of spectrophotometric equations for acetone, methanol and ethanol solvents. Photosynth Res 89:27–41

    Article  CAS  PubMed  Google Scholar 

  • Ritchie RJ, Sma-Air S (2020a) Solvent-free chlorophyll spectrometry in unicellular algal research. J Appl Phycol 32:2711–2723

    Article  CAS  Google Scholar 

  • Ritchie RJ, Sma-Air S (2020b) Using integrating sphere spectrophotometry in unicellular algal research. J Appl Phycol 32:2947–2958

    Article  CAS  Google Scholar 

  • Ritchie RJ, Sma-Air S (2023) Microalgae grown under different light sources. J Appl Phycol 35:551–566

    Article  CAS  Google Scholar 

  • Ritchie RJ, Sma-Air S, Phongphattarawat S (2021) Using DMSO for chlorophyll spectroscopy. J Appl Phycol 33:2047–2055

    Article  CAS  Google Scholar 

  • Ritchie RJ, Sma-Air S, Dummee V (2022) DMSO formula for chlorophyll determination in dinoflagellates (Chl a + c2). J Appl Phycol 34:335–341

    Article  CAS  Google Scholar 

  • Schumann R, Häubner N, Klausch S, Karsten U (2005) Chlorophyll extraction methods for the quantification of green microalgae colonizing building facades. Int Biodeterior Biodegrad 55:213–222

    Article  CAS  Google Scholar 

  • Tada K, Yamaguchi H, Montani S (2004) Comparison of chlorophyll concentrations obtained with 90% acetone and N,N-dimethylformamide: Extraction in coastal seawater. J Oceanogr 60:259–261

    Article  CAS  Google Scholar 

  • Qin H, Li S, Li D (2013) An improved method for determining phytoplankton chlorophyll a concentration without filtration. Hydrobiologia 707:81–95

    Article  CAS  Google Scholar 

  • Vernon LP (1960) Spectrophotometric determination of chlorophylls and pheophytins in plant extracts. Anal Chemy 32:1144–1150

    Article  CAS  Google Scholar 

  • Zar JH (2014) Biostatistical analysis. Pearson new international edition, 5th edn. Harlow, UK, p 761

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Acknowledgements

The authors wish to thank The Faculty of Technology and Environments for access to their facilities for this project.

Funding

No specific funding was used for the project.

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Contributions

RJR conceived the project, RJR & SSA did the experimental work together and wrote the manuscript and prepared the figures. Both authors reviewed the manuscript and checked the revised MS and figures.

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Correspondence to Raymond J. Ritchie.

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Ritchie, R.J., Sma-Air, S. A rapid method for developing chlorophyll equations using alternative solvents: DMF (N,N-dimethylformamide). J Appl Phycol 36, 3153–3161 (2024). https://doi.org/10.1007/s10811-024-03358-z

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