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@treangenlab

Treangen Lab

Treangen Lab @ Rice University

Popular repositories

  1. methphaser methphaser Public

    MethPhaser: methylation-based haplotype phasing of human genomes

    Python 40

  2. emu emu Public

    Python 27 3

  3. lemur lemur Public

    Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets

    Python 19

  4. Olivar Olivar Public

    Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens

    Python 18 2

  5. rhea rhea Public

    Recognizing HGT Events in Assemblies

    Python 9

  6. crykey crykey Public

    Python 8

Repositories

Showing 10 of 12 repositories
  • emu Public
    treangenlab/emu’s past year of commit activity
    Python 27 MIT 3 1 2 Updated Aug 27, 2024
  • magnet Public
    treangenlab/magnet’s past year of commit activity
    Jupyter Notebook 3 0 3 0 Updated Aug 20, 2024
  • Olivar Public

    Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens

    treangenlab/Olivar’s past year of commit activity
    Python 18 GPL-3.0 2 8 0 Updated Jul 27, 2024
  • methphaser Public

    MethPhaser: methylation-based haplotype phasing of human genomes

    treangenlab/methphaser’s past year of commit activity
    Python 40 MIT 0 9 0 Updated Jul 17, 2024
  • InfA-amplicon Public

    Amplicon sequencing of influenza A

    treangenlab/InfA-amplicon’s past year of commit activity
    1 GPL-3.0 0 0 0 Updated Jul 2, 2024
  • lemur Public

    Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets

    treangenlab/lemur’s past year of commit activity
    Python 19 MIT 0 2 0 Updated Jun 28, 2024
  • crykey_analysis_scripts Public
    treangenlab/crykey_analysis_scripts’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Apr 2, 2024
  • wasterwater_arg_metagenomics Public
    treangenlab/wasterwater_arg_metagenomics’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 8, 2024
  • rhea Public

    Recognizing HGT Events in Assemblies

    treangenlab/rhea’s past year of commit activity
    Python 9 MIT 0 0 0 Updated Jan 30, 2024
  • radmicrobes Public

    2023 RAD microbes boot camp

    treangenlab/radmicrobes’s past year of commit activity
    HTML 8 MIT 0 0 0 Updated Dec 18, 2023
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