Python package to obtain, parse and explore biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)
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Updated
Aug 13, 2024 - Python
Python package to obtain, parse and explore biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)
Python module to use the MISP Taxonomies
Development of the Gellish Communicator reference application and tools for universal data exchange and data integration supporting Formal English and other Gellish formalized natural languages.
A mapping project between tags (annotations, labels) and domain names
An automatic opinion implicit and explicit aspect identification and clustering tool for aspect-based opinion mining / sentiment analysis applications. Opcluster-PT also allows the customization for other languages, being minimally necessary a lexical language resource as such as WordNet, deverbal, foreign, diminutive and enhancing Lexicon. OpCl…
Language Model based ontology concept placement
MetaShot (Metagenomics Shotgun) is a complete pipeline designed for the taxonomic classification of the human microbiota members. In MetaShot, third party tools and new developed Python and Bash scripts are integrated to analyze paired-end (PE) Illumina sequences, offering an automated procedure covering all the analysis steps from raw data mana…
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