Cytofin-an R package for CyTOF data integration

Accurate and Efficient Simulation of CyTOF data

Analysis and visualisation single-cell proteomic data (CyTOF)

🌻 View single-cell RNA-seq and mass cytometry data in synovial tissues from patients with RA or OA.

Fast auto-cleanup of CyTOF data

Lite version of the tool to analyze and visualize CyTOF data (still under development)

Batch effect correction and automated gating of CyTOF data

Very fast method to read number of events from some / all FCS files in a directory

Opens two or more FCS files and creates new files that contain only the Channels common to all.

Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.

R Script to plot the average event rate in flow or mass cytometry (FCS) files

Source code for the At-Risk RA work