10000 [Issue 305] add new json parser by meretp · Pull Request #366 · spdx/tools-python · GitHub
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Dec 28, 2022
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296816b
[issue-305] add new parser
meretp Nov 25, 2022
cd095e2
[issue-305, refactor] add method to construct an object and raise SPD…
meretp Dec 14, 2022
f2f91fd
[issue-305, refactor] annotation_parser: extract methods to improve r…
meretp Dec 14, 2022
190cd5a
[issue-305, refactor] add methods to parse required/ optional fields …
meretp Dec 14, 2022
2834000
[issue-305, refactor] relationship_parser: extract dict to invert rel…
meretp Dec 14, 2022
6297673
[issue-305, refactor] add method to raise error if logger has message…
meretp Dec 14, 2022
4741a43
[issue-305, review] refactor methods in dict_parsing_functions.py, sm…
meretp Dec 15, 2022
080d848
[issue-305, refactor] json_parser
meretp Dec 15, 2022
5826922
[issue-305, reformat]
meretp Dec 19, 2022
e6332cb
[issue-305] add testcases and update license_expression parser
meretp Dec 19, 2022
1f6d5b6
[issue-305, refactor] delete duplicated check for error type
meretp Dec 20, 2022
fc980b1
[issue-305, review] fix messages, naming, type hints
meretp Dec 21, 2022
3fe3e11
[issue-305, review] refactor relationship_parser
meretp Dec 21, 2022
0be1780
[issue-305, review] refactor snippet_parser
meretp Dec 21, 2022
c5b8d3c
[issue-305, review] make naming consistent
meretp Dec 21, 2022
03cce38
[issue-305, review] add test for dict parsing functions and catch Val…
meretp Dec 21, 2022
2dcd125
[issue-305, review] add None handling for required fields
meretp Dec 21, 2022
50c3038
[issue-305, review] make error messages consistent, add test for json…
meretp Dec 28, 2022
562f288
[issue-305, review] add tests, change test data, naming of tests and …
meretp Dec 22, 2022
a722036
[issue-305, review] add method to parse fields that can be SpdxNone o…
meretp Dec 22, 2022
c8851d8
[issue-305, review] refactor parse_field_or_log_error
meretp Dec 22, 2022
347051a
[issue-305, review] reformat, type hints, fix typos, error messages
meretp Dec 28, 2022
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[issue-305, review] reformat, type hints, fix typos, error messages
Signed-off-by: Meret Behrens <meret.behrens@tngtech.com>
  • Loading branch information
meretp committed Dec 28, 2022
commit 347051ace184acdb4362faeef466ca28e6688709
16 changes: 7 additions & 9 deletions src/parser/json/annotation_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -34,11 +34,8 @@ def parse_all_annotations(self, input_doc_dict: Dict) -> List[Annotation]:
self.parse_annotations_from_object(annotations, [input_doc_dict])
reviews: List[Dict] = input_doc_dict.get("revieweds", [])
for review in reviews:
annotations = append_parsed_field_or_log_error(self.logger, annotations, review,
lambda x: self.parse_review(x,
spdx_id=input_doc_dict.get(
"SPDXID")))

annotations = append_parsed_field_or_log_error(
self.logger, annotations, review, lambda x: self.parse_review(x, spdx_id=input_doc_dict.get("SPDXID")))
packages: List[Dict] = input_doc_dict.get("packages", [])
self.parse_annotations_from_object(annotations, packages)
files: List[Dict] = input_doc_dict.get("files", [])
Expand All @@ -54,8 +51,9 @@ def parse_annotations_from_object(self, annotations: List[Annotation], element_l
element_spdx_id: Optional[str] = element.get("SPDXID")
element_annotations: List[Dict] = element.get("annotations", [])
annotations.extend(parse_field_or_log_error(self.logger, element_annotations,
lambda y: self.parse_annotation(y, spdx_id=element_spdx_id),
[], True))

lambda y: self.parse_annotation(y, spdx_id=element_spdx_id),
[], True))

def parse_annotation(self, annotation_dict: Dict, spdx_id: Optional[str] = None) -> Annotation:
logger = Logger()
Expand All @@ -75,8 +73,8 @@ def parse_annotation(self, annotation_dict: Dict, spdx_id: Optional[str] = None)
raise_parsing_error_if_logger_has_messages(logger, "Annotation")
annotation_dict = construct_or_raise_parsing_error(Annotation,
dict(spdx_id=spdx_id, annotation_type=annotation_type,
annotator=annotator, annotation_date=annotation_date,
annotation_comment=annotation_comment))
annotator=annotator, annotation_date=annotation_date,
annotation_comment=annotation_comment))

return annotation_dict

Expand Down
2 changes: 1 addition & 1 deletion src/parser/json/checksum_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@ def parse_checksum(checksum_dict: Dict) -> Checksum:
try:
checksum_algorithm = ChecksumAlgorithm[algorithm]
except KeyError:
logger.append(f"Invalid Algorithm for checksum: {algorithm}")
logger.append(f"Invalid ChecksumAlgorithm: {algorithm}")
checksum_algorithm = None
checksum_value: Optional[str] = checksum_dict.get("checksumValue")
raise_parsing_error_if_logger_has_messages(logger, "Checksum")
Expand Down
11 changes: 7 additions & 4 deletions src/parser/json/dict_parsing_functions.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
# See the License for the specific language governing permissions and
# limitations under the License.
from datetime import datetime
from typing import Any, Callable, Dict, List, Union
from typing import Any, Callable, Dict, List, Union, Optional

from src.model.spdx_no_assertion import SpdxNoAssertion
from src.model.spdx_none import SpdxNone
Expand Down Expand Up @@ -74,15 +74,17 @@ def raise_parsing_error_if_logger_has_messages(logger: Logger, parsed_object_nam
else:
raise SPDXParsingError(logger.get_messages())

def parse_field_or_no_assertion_or_none(field: str, method_for_field: Callable=lambda x: x) -> Any:

def parse_field_or_no_assertion_or_none(field: Optional[str], method_for_field: Callable = lambda x: x) -> Any:
if field == SpdxNoAssertion().__str__():
return SpdxNoAssertion()
elif field == SpdxNone().__str__():
return SpdxNone()
else:
return method_for_field(field)

def parse_field_or_no_assertion(field: str, method_for_field: Callable = lambda x: x) -> Any:

def parse_field_or_no_assertion(field: Optional[str], method_for_field: Callable = lambda x: x) -> Any:
if field == SpdxNoAssertion().__str__():
return SpdxNoAssertion()
else:
Expand All @@ -94,6 +96,7 @@ def parse_list_of_elements(list_of_elements: List[Dict], method_to_parse_element
logger = Logger()
parsed_elements = []
for element_dict in list_of_elements:
parsed_elements = append_parsed_field_or_log_error(logger, parsed_elements, element_dict, method_to_parse_element)
parsed_elements = append_parsed_field_or_log_error(logger, parsed_elements, element_dict,
method_to_parse_element)
raise_parsing_error_if_logger_has_messages(logger)
return parsed_elements
32 changes: 13 additions & 19 deletions src/parser/json/package_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -63,29 +63,23 @@ def parse_package(self, package_dict: Dict) -> Package:
lambda x: x, True)
homepage: Optional[str] = package_dict.get("homepage")
license_comments: Optional[str] = package_dict.get("licenseComments")
license_concluded = parse_field_or_log_error(logger, package_dict.get("licenseConcluded"),
lambda x: parse_field_or_no_assertion_or_none(x,
self.license_expression_parser.parse_license_expression),
None)
license_concluded = parse_field_or_log_error(
logger, package_dict.get("licenseConcluded"),
lambda x: parse_field_or_no_assertion_or_none(x, self.license_expression_parser.parse_license_expression),
None)

license_declared: Optional[Union[LicenseExpression, SpdxNoAssertion, SpdxNone]] = parse_field_or_log_error(
logger, package_dict.get("licenseDeclared"),
lambda x: parse_field_or_no_assertion_or_none(x, self.license_expression_parser.parse_license_expression))

license_info_from_file: Optional[
Union[List[LicenseExpression], SpdxNoAssertion, SpdxNone]] = parse_field_or_log_error(logger,
package_dict.get(
"licenseInfoFromFiles"),
lambda
x: parse_field_or_no_assertion_or_none(
x,
self.license_expression_parser.parse_license_expressions))
originator: Optional[Union[Actor, SpdxNoAssertion]] = parse_field_or_log_error(logger,
package_dict.get("originator"),
lambda
x: parse_field_or_no_assertion(
x,
self.actor_parser.parse_actor))
license_info_from_file: Optional[Union[List[LicenseExpression], SpdxNoAssertion, SpdxNone]] = \
parse_field_or_log_error(
logger, package_dict.get("licenseInfoFromFiles"),
lambda x: parse_field_or_no_assertion_or_none(x,
self.license_expression_parser.parse_license_expressions))
originator: Optional[Union[Actor, SpdxNoAssertion]] = parse_field_or_log_error(
logger, package_dict.get("originator"),
lambda x: parse_field_or_no_assertion(x, self.actor_parser.parse_actor))
package_file_name: Optional[str] = package_dict.get("packageFileName")

package_verification_code: Optional[
Expand Down Expand Up @@ -155,7 +149,7 @@ def parse_external_ref_category(external_ref_category_str: str) -> ExternalPacka
external_ref_category = ExternalPackageRefCategory[
json_str_to_enum_name(external_ref_category_str)]
except KeyError:
raise SPDXParsingError([f"Invalid Category for ExternalPackageRef {external_ref_category_str}"])
raise SPDXParsingError([f"Invalid ExternalPackageRefCategory: {external_ref_category_str}"])

return external_ref_category

Expand Down
17 changes: 8 additions & 9 deletions src/parser/json/relationship_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,10 +41,9 @@ def parse_all_relationships(self, input_doc_dict: Dict) -> List[Relationship]:

package_dicts: List[Dict] = input_doc_dict.get("packages", [])

relationships.extend(
parse_field_or_log_error(self.logger, package_dicts, lambda x: self.parse_has_files(package_dicts=x,
existing_relationships=relationships),
[]))
relationships.extend(parse_field_or_log_error(
self.logger, package_dicts,
lambda x: self.parse_has_files(package_dicts=x, existing_relationships=relationships), []))

file_dicts: List[Dict] = input_doc_dict.get("files", [])

Expand Down Expand Up @@ -144,13 +143,13 @@ def get_all_relationships_without_comments(existing_relationships: List[Relation
def invert_relationship(self, relationship: Relationship) -> Relationship:
return Relationship(related_spdx_element_id=relationship.spdx_element_id,
spdx_element_id=relationship.related_spdx_element_id,
relationship_type=self.invvert_relationship_types[relationship.relationship_type],
relationship_type=self.invert_relationship_types[relationship.relationship_type],
comment=relationship.comment)

invvert_relationship_types = {RelationshipType.DESCRIBES: RelationshipType.DESCRIBED_BY,
RelationshipType.DESCRIBED_BY: RelationshipType.DESCRIBES,
RelationshipType.CONTAINS: RelationshipType.CONTAINED_BY,
RelationshipType.CONTAINED_BY: RelationshipType.CONTAINS}
invert_relationship_types = {RelationshipType.DESCRIBES: RelationshipType.DESCRIBED_BY,
RelationshipType.DESCRIBED_BY: RelationshipType.DESCRIBES,
RelationshipType.CONTAINS: RelationshipType.CONTAINED_BY,
RelationshipType.CONTAINED_BY: RelationshipType.CONTAINS}

@staticmethod
def parse_file_dependencies(file_dicts: List[Dict]) -> List[
Expand Down
2 changes: 1 addition & 1 deletion tests/parser/test_checksum_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ def test_parse_invalid_checksum():
checksum_parser.parse_checksum(checksum_dict)

TestCase().assertCountEqual(err.value.get_messages(),
["Error while parsing Checksum: ['Invalid Algorithm for checksum: SHA']"])
["Error while parsing Checksum: ['Invalid ChecksumAlgorithm: SHA']"])


def test_parse_incomplete_checksum():
Expand Down
2 changes: 1 addition & 1 deletion tests/parser/test_creation_info_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@
from src.parser.json.creation_info_parser import CreationInfoParser


def test_pares_creation_info():
def test_parse_creation_info():
creation_info_parser = CreationInfoParser()
doc_dict = {
"spdxVersion": "2.3",
Expand Down
2 changes: 1 addition & 1 deletion tests/parser/test_file_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -107,7 +107,7 @@ def test_parse_invalid_files():
TestCase().assertCountEqual(err.value.get_messages(), [
"Error while constructing File: ['SetterError File: type of argument " '"checksums" must be a list; got NoneType instead: None\']',
'Error while constructing File: [\'SetterError File: type of argument "name" ' "must be str; got NoneType instead: None']",
'Error while parsing File: ["Error while parsing Checksum: [\'Invalid Algorithm for checksum: MD\']"]'])
'Error while parsing File: ["Error while parsing Checksum: [\'Invalid ChecksumAlgorithm: MD\']"]'])


def test_parse_file_types():
Expand Down
13 changes: 11 additions & 2 deletions tests/parser/test_package_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -156,7 +156,7 @@ def test_parse_invalid_package():
package_parser.parse_package(package_dict)

TestCase().assertCountEqual(err.value.get_messages(), [
'Error while parsing Package: ["Error while parsing Checksum: [\'Invalid Algorithm for checksum: SHA\']"]'])
'Error while parsing Package: ["Error while parsing Checksum: [\'Invalid ChecksumAlgorithm: SHA\']"]'])


def test_parse_packages():
Expand Down Expand Up @@ -184,7 +184,7 @@ def test_parse_packages():

TestCase().assertCountEqual(err.value.get_messages(),
['Error while parsing Package: ["Error while parsing Checksum: '
'[\'Invalid Algorithm for checksum: SHA\']"]',
'[\'Invalid ChecksumAlgorithm: SHA\']"]',
"Error while constructing Package: ['SetterError Package: type of argument "
'"name" must be str; got int instead: 5\']'])

Expand All @@ -200,3 +200,12 @@ def test_parse_external_ref():

TestCase().assertCountEqual(err.value.get_messages(), [
"Error while constructing ExternalPackageRef: ['SetterError " 'ExternalPackageRef: type of argument "category" must be ' "src.model.package.ExternalPackageRefCategory; got NoneType instead: None', " '\'SetterError ExternalPackageRef: type of argument "locator" must be str; ' "got NoneType instead: None']"])

def test_parse_invalid_external_package_ref_category():
package_parser = PackageParser()
external_package_ref_category = "TEST"

with pytest.raises(SPDXParsingError) as err:
package_parser.parse_external_ref_category(external_package_ref_category)

TestCase().assertCountEqual(err.value.get_messages(), ["Invalid ExternalPackageRefCategory: TEST"])
4 changes: 2 additions & 2 deletions tests/parser/test_relationship_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -129,13 +129,13 @@ def test_parse_has_files_without_duplicating_relationships():
"hasFiles": ["SPDXRef-File1", "SPDXRef-File2"]
}]
}
created_relationships = [
existing_relationships = [
Relationship(spdx_element_id="SPDXRef-Package", relationship_type=RelationshipType.CONTAINS,
related_spdx_element_id="SPDXRef-File1", comment="This relationship has a comment."),
Relationship(spdx_element_id="SPDXRef-File2", relationship_type=RelationshipType.CONTAINED_BY,
related_spdx_element_id="SPDXRef-Package")]

relationships = relationship_parser.parse_has_files(document_dict.get("packages"),
existing_relationships=created_relationships)
existing_relationships=existing_relationships)

assert len(relationships) == 0
0