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snakemake-wrappers
snakemake-wrappers PublicThis is the development home of the Snakemake wrapper repository, see
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snakemake-github-action
snakemake-github-action PublicA Github action for running a Snakemake workflow
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snakemake-workflow-catalog
snakemake-workflow-catalog PublicA statically generated catalog of available Snakemake workflows
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snakedeploy
snakedeploy Publicdeploy a snakemake pipeline directly from version control (under development)
Repositories
- snakemake-executor-plugin-slurm Public
A Snakemake executor plugin for submitting jobs to a SLURM cluster
snakemake/snakemake-executor-plugin-slurm’s past year of commit activity - snakemake-interface-software-deployment-plugins Public
A stable interface for Snakemake software deployment plugins
snakemake/snakemake-interface-software-deployment-plugins’s past year of commit activity - snakemake-lang-vscode-plugin Public
Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.
snakemake/snakemake-lang-vscode-plugin’s past year of commit activity - snakemake-executor-plugin-kubernetes Public
A snakemake executor plugin for submission of jobs to Kubernetes
snakemake/snakemake-executor-plugin-kubernetes’s past year of commit activity - snakemake-interface-executor-plugins Public
This package provides a stable interface for interactions between Snakemake and its executor plugins.
snakemake/snakemake-interface-executor-plugins’s past year of commit activity