simplified code in application_prediction.get_weighted_ligand_target_links #13
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11 errors and 12 warnings
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Run r-lib/actions/check-r-package@v2
Can't combine `..1$weight` <double[,22]> and `..3$weight` <double[,12]>.
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Can't combine `..1$weight` <double[,63]> and `..2$weight` <double[,53]>.
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Run r-lib/actions/check-r-package@v2
The total size of the 19 globals exported for future expression (‘FUN()’) is 2.81 GiB.. This exceeds the maximum allowed size of 500.00 MiB (option 'future.globals.maxSize'). The three largest globals are ‘FUN’ (2.54 GiB of class ‘function’), ‘raw_umi’ (272.22 MiB of class ‘S4’) and ‘model_pars_fit’ (1.72 MiB of class ‘list’)
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Can't combine `..1$weight` <double[,19]> and `..2$weight` <double[,17]>.
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there is no package called ‘DiagrammeRsvg’
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trying to use CRAN without setting a mirror
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Run r-lib/actions/check-r-package@v2
Can't select columns that don't exist.
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Run r-lib/actions/check-r-package@v2
there is no package called ‘nsga2R’
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cannot read from connection
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Run r-lib/actions/check-r-package@v2
Can't combine `..1$weight` <double[,31]> and `..2$weight` <double[,42]>.
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Run r-lib/actions/setup-r@v2
No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2
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Run r-lib/actions/setup-r-dependencies@v2
Cache not found for keys: macOS Sonoma 14.7.2-R version 4.4.2 (2024-10-31)-1-4ddb6a128ff975a0429bc094b00f63d1ba42e26c4465f20331cb43d1922e7075, macOS Sonoma 14.7.2-R version 4.4.2 (2024-10-31)-1-
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Run r-lib/actions/check-r-package@v2
'::' or ':::' imports not declared from:
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Run r-lib/actions/check-r-package@v2
get_expressed_genes:
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Run r-lib/actions/check-r-package@v2
Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':
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Run r-lib/actions/check-r-package@v2
Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:
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Run r-lib/actions/check-r-package@v2
Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':
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Run r-lib/actions/check-r-package@v2
LazyData DB of 5.8 MB without LazyDataCompression set
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Run r-lib/actions/check-r-package@v2
Files in the 'vignettes' directory but no files in 'inst/doc':
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Directory 'inst/doc' does not exist.
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Run r-lib/actions/check-r-package@v2
the standard deviation is zero
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Run r-lib/actions/setup-r@v2
pkgconf 2.3.0_1 is already installed and up-to-date.
To reinstall 2.3.0_1, run:
brew reinstall pkgconf
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Run r-lib/actions/setup-r@v2
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated
dependents or dependents with broken linkage!
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