kathiwaury / GenomeAnalysis Public

Metagenomics project for Genome Analysis course, part of Bioinformatics Master at Uppsala University

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Name		Name	Last commit message	Last commit date
Latest commit History 60 Commits
Results		Results
README.md		README.md
bwa_DNA_mapping_sbatch_SRR4342129.sh		bwa_DNA_mapping_sbatch_SRR4342129.sh
bwa_DNA_mapping_sbatch_SRR4342133.sh		bwa_DNA_mapping_sbatch_SRR4342133.sh
bwa_sbatch_SRR4342129.sh		bwa_sbatch_SRR4342129.sh
bwa_sbatch_SRR4342129_bin1.sh		bwa_sbatch_SRR4342129_bin1.sh
bwa_sbatch_SRR4342129_bin2.sh		bwa_sbatch_SRR4342129_bin2.sh
bwa_sbatch_SRR4342133.sh		bwa_sbatch_SRR4342133.sh
bwa_sbatch_SRR4342133_bin1.sh		bwa_sbatch_SRR4342133_bin1.sh
checkm_sbatch_SRR4342129.sh		checkm_sbatch_SRR4342129.sh
checkm_sbatch_SRR4342133.sh		checkm_sbatch_SRR4342133.sh
htseq.py		htseq.py
htseq_sbatch_SRR4342129.sh		htseq_sbatch_SRR4342129.sh
htseq_sbatch_SRR4342133.sh		htseq_sbatch_SRR4342133.sh
megahit_sbatch.sh		megahit_sbatch.sh
megahit_sbatch_SRR4342129.sh		megahit_sbatch_SRR4342129.sh
megahit_sbatch_SRR4342133.sh		megahit_sbatch_SRR4342133.sh
metaquast_sbatch_SRR4342129.sh		metaquast_sbatch_SRR4342129.sh
metaquast_sbatch_SRR4342133.sh		metaquast_sbatch_SRR4342133.sh
phylophlan_sbatch_SRR4342129.sh		phylophlan_sbatch_SRR4342129.sh
phylophlan_sbatch_SRR4342133.sh		phylophlan_sbatch_SRR4342133.sh
prokka_sbatch_SRR4342129.sh		prokka_sbatch_SRR4342129.sh
prokka_sbatch_SRR4342133.sh		prokka_sbatch_SRR4342133.sh
sam_to_bam_sorted.sh		sam_to_bam_sorted.sh