GitHub - huayu1111/carmProj: The codes used for the analysis reported in our study.

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The codes used for the analysis reported in our study.

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Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
M1M2_DiffAnaly.R		M1M2_DiffAnaly.R
Path_Anal_CD206.R		Path_Anal_CD206.R
Path_Anal_CD68.R		Path_Anal_CD68.R
Path_Anal_CD80.R		Path_Anal_CD80.R
Path_Anal_CD86.R		Path_Anal_CD86.R
ipsClusteringAnalysis_singlecell.R		ipsClusteringAnalysis_singlecell.R
ipsClusteringAnalysis_singlecell_CD80.R		ipsClusteringAnalysis_singlecell_CD80.R
ipsClusteringAnalysis_singlecell_all.R		ipsClusteringAnalysis_singlecell_all.R
ipsClusteringAnalysis_singlecell_total.R		ipsClusteringAnalysis_singlecell_total.R
ipsPCAAnalysis_singlecell.R		ipsPCAAnalysis_singlecell.R
ipsPCAAnalysis_singlecell_CD80.R		ipsPCAAnalysis_singlecell_CD80.R
ipsPCAAnalysis_singlecell_all.R		ipsPCAAnalysis_singlecell_all.R
ipsPCAAnalysis_singlecell_total.R		ipsPCAAnalysis_singlecell_total.R
plotARG1boxplot.R		plotARG1boxplot.R
plotBoxplot20230724.R		plotBoxplot20230724.R
plotBoxplot20230809.R		plotBoxplot20230809.R
plotCCL13boxplot.R		plotCCL13boxplot.R
plotCCL8boxplot.R		plotCCL8boxplot.R
plotCD163boxplot.R		plotCD163boxplot.R
plotCD206boxplot.R		plotCD206boxplot.R
plotCD68boxplot.R		plotCD68boxplot.R
plotCD80boxplot.R		plotCD80boxplot.R
plotCD83boxplot.R		plotCD83boxplot.R
plotCD86boxplot.R		plotCD86boxplot.R
plotCSF1Rboxplot.R		plotCSF1Rboxplot.R
plotCSFRboxplot.R		plotCSFRboxplot.R
plotCXCL11boxplot.R		plotCXCL11boxplot.R
plotCXCL9boxplot.R		plotCXCL9boxplot.R
plotDiffHeatmapCD206.R		plotDiffHeatmapCD206.R
plotDiffHeatmapCD68.R		plotDiffHeatmapCD68.R
plotDiffHeatmapCD80.R		plotDiffHeatmapCD80.R
plotDiffHeatmapCD86.R		plotDiffHeatmapCD86.R
plotHLAboxplots.R		plotHLAboxplots.R
plotHeatmap20230724.R		plotHeatmap20230724.R
plotHeatmap20230809.R		plotHeatmap20230809.R
plotM1M2markerPerc.R		plotM1M2markerPerc.R
plotMMPboxplots.R		plotMMPboxplots.R
plotMetabolicHeatmapCD206.R		plotMetabolicHeatmapCD206.R
plotMetabolicHeatmapCD68.R		plotMetabolicHeatmapCD68.R
plotMetabolicHeatmapCD80.R		plotMetabolicHeatmapCD80.R
plotMetabolicHeatmapCD86.R		plotMetabolicHeatmapCD86.R
plotTraditionHeatmapCD206.R		plotTraditionHeatmapCD206.R
plotTraditionHeatmapCD68.R		plotTraditionHeatmapCD68.R
plotTraditionHeatmapCD80.R		plotTraditionHeatmapCD80.R
plotTraditionHeatmapCD86.R		plotTraditionHeatmapCD86.R
plotTraditionHeatmapTotal.R		plotTraditionHeatmapTotal.R
plotVolcano.R		plotVolcano.R
predbyScibet20210721.R		predbyScibet20210721.R
seurat_AA_Anal.R		seurat_AA_Anal.R
seurat_BB_Anal.R		seurat_BB_Anal.R
seurat_DD_Anal.R		seurat_DD_Anal.R
tranReadsToTPM_singlecell.R		tranReadsToTPM_singlecell.R