Typo #9

	on:
	push:
	branches:
	- devel
	- ubsan-errors
	pull_request:
	branches:
	- devel

	name: Test package for UBSAN issues

	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
	R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
	ASAN_OPTIONS: detect_leaks=0

	jobs:
	R-CMD-check:
	runs-on: ubuntu-latest
	container:
	image: ${{ matrix.config.image }}
	name: ${{ matrix.config.name }}

	strategy:
	fail-fast: false
	matrix:
	config:
	- { name: gcc-san, image: rocker/r-devel-san}
	- { name: clang-ubsan, image: rocker/r-devel-ubsan-clang}

	steps:

	- uses: actions/checkout@v4

	- name: Cache Dependencies
	id: cache-deps
	uses: actions/cache@v4
	with:
	path: /usr/local/lib/R/site-library
	key: R_lib-${{ matrix.config.name }}-${{ hashFiles('**/DESCRIPTION') }}
	restore-keys: \|
	R_lib-${{ matrix.config.name }}-${{ hashFiles('**/DESCRIPTION') }}
	R_lib-${{ matrix.config.name }}-

	- name: Install system libraries
	run: \|
	apt-get update && apt-get -y install git pandoc

	- name: Set R profile
	run: echo 'options(Ncpus=4L, timeout = 300)' > $HOME/.Rprofile

	- name: Install packages
	run: \|
	install.packages("BiocManager")
	BiocManager::install("rhdf5")
	shell: Rscriptdevel {0}

	- name: Bioc - Build, Install, Check
	id: build-install-check
	uses: grimbough/bioc-actions/build-install-check@v1

	## upload the Rcheck folder if the workflow fails
	- name: Upload output
	uses: actions/upload-artifact@v4
	with:
	name: ${{ matrix.config.name }}-R-check
	path: \|
	${{ steps.build-install-check.outputs.check-dir }}

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