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Pull requests: galaxyproject/galaxy

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Pull requests list

Add fsspec base implementation for File Source plugins area/backend kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#20698 opened Jul 25, 2025 by davelopez • Draft
2 of 5 tasks
25.1
[25.0] Fix dataset serializers and response models area/API
#20694 opened Jul 24, 2025 by arash77 Loading…
2 of 4 tasks
25.1
11
add special case for BAM files in RStudio area/tools
#20692 opened Jul 23, 2025 by bgruening Loading… 25.1
2
[25.0] Fix scratchbook display area/UI-UX
#20684 opened Jul 22, 2025 by dannon Loading…
1 of 4 tasks
10000 25.1
1
Bump form-data from 4.0.0 to 4.0.4 in /client area/client dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#20683 opened Jul 21, 2025 by dependabot bot Loading… 25.1
Rework and expand client job state handling constants. area/client area/upload kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#20675 opened Jul 17, 2025 by jmchilton Loading…
2 tasks done
25.1
Add (sub) workflow creation from selection area/API area/UI-UX
#20668 opened Jul 16, 2025 by ElectronicBlueberry • Draft
1 of 4 tasks
[25.0] Remove content from packages/meta/requirements.txt area/packaging
#20662 opened Jul 15, 2025 by nsoranzo Loading…
2 of 4 tasks
25.1
7
[25.0] Fix deferred datasets in multiple dataset parameters. area/tool-framework kind/bug
#20650 opened Jul 11, 2025 by jmchilton Loading…
2 tasks done
25.1
3
Code cleanups from pyupgrade area/API area/auth Authentication and authorization area/database Galaxy's database or data access layer area/datatypes area/jobs area/libraries Data libraries area/scripts area/security area/testing/api area/testing/integration area/testing/selenium area/testing area/tool-framework area/workflows kind/refactoring cleanup or refactoring of existing code, no functional changes
#20642 opened Jul 10, 2025 by nsoranzo Loading…
2 of 4 tasks
25.1
4
Add a "Feedback" tab to Workflow Invocations area/UI-UX area/workflows kind/feature
#20624 opened Jul 8, 2025 by ahmedhamidawan Loading…
2 of 4 tasks
25.1
1
3
Improve docs for invalidjobexception_state and _retry of DRMAA runners
#20612 opened Jul 8, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.1
6
[WIP] Pulsar-based ARC Job Runner area/API area/jobs area/testing/integration area/testing
#20598 opened Jul 3, 2025 by kysrpex • Draft
1 of 4 tasks
@kysrpex
6
Implement Data Landing Requests area/API area/upload kind/enhancement
#20592 opened Jul 2, 2025 by jmchilton • Draft
2 tasks done
25.1
1
[25.0] Add datatype for LexicMap index area/datatypes area/testing
#20586 opened Jun 30, 2025 by Smeds Loading…
1 of 4 tasks
25.1
8
Add new ODV datatype area/datatypes
#20581 opened Jun 28, 2025 by pavanvidem Loading…
1 of 4 tasks
25.1
3
Drop unnecessary getattr(config, "key") calls area/datatypes area/jobs area/tool-framework kind/refactoring cleanup or refactoring of existing code, no functional changes
#20578 opened Jun 28, 2025 by mvdbeek • Draft
1 of 4 tasks
2
[24.2] Fix planemo serve, need user list area/API kind/bug
#20575 opened Jun 27, 2025 by mvdbeek • Draft
1 of 4 tasks
[25.0] Fix Workflow Preview Header Layout area/UI-UX
#20570 opened Jun 26, 2025 by itisAliRH • Draft
1 of 3 tasks
25.1
1
[25.0] Propagate cached job output replacement to copies of outputs area/database Galaxy's database or data access layer kind/bug
#20553 opened Jun 24, 2025 by mvdbeek Loading…
2 of 4 tasks
25.1
[25.0] Fix output dataset collection visualizations area/UI-UX
#20544 opened Jun 22, 2025 by mvdbeek • Draft
1 of 4 tasks
[25.0] Improve workflow monitor loop times area/workflows
#20522 opened Jun 19, 2025 by mvdbeek • Draft A77B
1 of 4 tasks
25.1
5
Remove deprecated tool document cache area/admin area/API area/database Galaxy's database or data access layer area/dependencies area/documentation area/packaging area/tool-framework area/util kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#20510 opened Jun 18, 2025 by nsoranzo Loading…
2 of 4 tasks
25.1
1
1
Show expose_user_name in /api/configuration
#20504 opened Jun 18, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.1
[25.0] Add Auspice JSON datatype area/datatypes
#20466 opened Jun 15, 2025 by pvanheus Loading…
2 of 4 tasks
25.1
9
ProTip! What’s not been updated in a month: updated:<2025-06-25.
0