Lists (17)
Stars
A proof of concept daisy-chaining Nextflow workflows
Nextflow runs monitoring and organisation UI
PyGWalker: Turn your pandas dataframe into an interactive UI for visual analysis
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
Script for generating snapshot assertions for nf-tests
Phylogenetic maximum representation sampling: choosing most representative strains or taxa
Miscellaneous Perl scripts from 20 years in microbial bioinformatics
A single cell transcriptomics pipeline for QC, integration and making the data presentable
SGPT is a command-line tool that provides a convenient way to interact with OpenAI models, enabling users to run queries, generate shell commands and produce code directly from the terminal.
Command line utility for manipulating Illumina-generated FASTQ files.
Visualise and analyse nanopore (ONT) raw signals
🌐 The Internet OS! Free, Open-Source, and Self-Hostable.
Disty McMatrixface - compute a distance matrix from a core genome alignment file
Fast and accurately polish the genome generated by long reads.
A comprehensive assembly evaluating pipeline
RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches
Assort phage protein sequences into phamilies using MMseqs2
A lightweight, pure-Swift library for downloading and caching images from the web.
Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform (beta)
An extremely fast Python package and project manager, written in Rust.
Statistical test of similarity between binary data using the Jaccard/Tanimoto coefficients
Python package to plot a phylogenetic tree on an existing matplotlib axis.