OMOP Common Data Model.

A reference manager.

A schema for clinical metadata.

Genomic interval operations on Pandas DataFrames

Formalizing and benchmarking open problems in single-cell genomics

Spatial Single Cell Analysis in Python

User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

Cloud-native genomic dataframes and batch computing

Scalable genetics toolkit

A simple, yet elegant, HTTP library.

Exon is an OLAP query engine specifically for biology and life science applications.

Lamin's R SDK.

Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

Fastest library to load data from DB to DataFrames in Rust and Python

Use cases for spatial data.

Perturbation Analysis in the scverse ecosystem.

single cell foundation model for Gene network inference and more

Python API and Jupyter widget for Vitessce

Collaborate on LaminDB instances.

Cross-platform lib for process and system monitoring in Python

Type in Morse code by repeatedly slamming your laptop shut

A template for Viash projects

dstack is an open-source alternative to Kubernetes, designed to simplify development, training, and deployment of AI across any cloud or on-prem. It supports NVIDIA, AMD, and TPU.

A command line utility to display dependency tree of the installed Python packages

Annotated multivariate observation data in R

The code coverage tool for Python

A sphinx extension for designing beautiful, screen-size responsive web components.

PostgreSQL database adapter for the Python programming language