update

dccuchile · Aug 23, 2022 · b4ab75c · b4ab75c
1 parent 42702be
commit b4ab75c
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Showing 2 changed files with 10 additions and 10 deletions.
diff --git a/scripts/.Rhistory b/scripts/.Rhistory
@@ -1,12 +1,3 @@
-dim(sim.height)
-sim.height <- sapply( weight.seq , height.weight)
-dim(sim.height)
-library(rethinking)
-data(rugged)
-d <- rugged
-d$log_gdp <- log(d$rgdppc_2000)
-dd <- d[ complete.cases(d$rgdppc_2000) , ]
-dd.trim <- dd[ , c("log_gdp","rugged","cont_africa") ]
 str(dd.trim)
 library(rethinking)
 data(rugged)
@@ -510,3 +501,12 @@ install.packages("GGally")
 install.packages("GGally")
 install.packages("GGally")
 ggcor
+# we recommend running this is a fresh R session or restarting your current session
+install.packages("cmdstanr", repos = c("https://mc-stan.org/r-packages/", getOption("repos")))
+cmdstanr::install_cmdstan()
+install.packages(c("coda","mvtnorm","devtools","loo","dagitty","shape"))
+devtools::install_github("rmcelreath/rethinking")
+install.packages(c("coda", "mvtnorm", "devtools", "loo", "dagitty", "shape"))
+cmdstanr::install_cmdstan()
+install.packages(c("coda","mvtnorm","devtools","loo","dagitty","shape"))
+devtools::install_github("rmcelreath/rethinking")
diff --git a/scripts/rethinking_install.R b/scripts/rethinking_install.R
@@ -8,5 +8,5 @@ install.packages("cmdstanr", repos = c("https://mc-stan.org/r-packages/", getOpt
 
 cmdstanr::install_cmdstan()
 
-install.packages(c("coda","mvtnorm","devtools","loo","dagitty","shape"))
+install.packages(c("coda","mvtnorm","devtools","loo","dagitty","shape"), dependencies = TRUE)
 devtools::install_github("rmcelreath/rethinking")