abcsFrederick
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NGS_Preprocessing_Pipeline
NGS_Preprocessing_Pipeline PublicNGS Pipelines for Preprocessing RNA-seq, Whole Genome Sequencing and Exome-seq, and miRNA-Seq Data
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NGS_SV_CNV_Pipelines
NGS_SV_CNV_Pipelines PublicGenome Structural Variants Detection and Annotation Pipelines. Functions include NGS data QC, both germline and somatic SVs and CNVs detections, SVs and CNVs annotation and visualization.
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Repositories
Showing 10 of 86 repositories
- CHAMPAGNE Public Forked from CCBR/CHAMPAGNE
CHromAtin iMmuno PrecipitAtion sequencinG aNalysis pipEline
abcsFrederick/CHAMPAGNE’s past year of commit activity - ASPEN Public Forked from CCBR/ASPEN
CCBR pipeline for preliminary QC, peak calling, differential chromatin accessibility analysis with ATACseq datasets 🌲
abcsFrederick/ASPEN’s past year of commit activity - XAVIER Public Forked from CCBR/XAVIER
An easy-to-use, flexible variant calling pipeline for use on the Biowulf cluster at NIH
abcsFrederick/XAVIER’s past year of commit activity - RENEE Public Forked from CCBR/RENEE
A comprehensive quality-control and quantification RNA-seq pipeline
abcsFrederick/RENEE’s past year of commit activity
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