My General Project Setup for Python
This is a general-purpose template for bioinformatics and data science projects. Includes:
- Modular pipeline (
main.py) - Logging
- SQLite / JSON / CSV support
- Sentence embedding for semantic modeling
- Reusable configuration and scripts
# clone and create env
conda env create -f environment.yml
conda activate bio-template
# or use pip
pip install -r requirements.txt