Microbial-Ecology-Group
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AMRplusplus
AMRplusplus PublicAMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.
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Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots
Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots PublicThis repository contains all of the code required to replicate the analysis in the manuscript "METAGENOMIC INVESTIGATION OF THE EFFECTS OF ANTIMICROBIAL DRUG USE PRACTICES ON THE MICROBIOME AND RES…
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Repositories
- AMRplusplus Public
AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.
Microbial-Ecology-Group/AMRplusplus’s past year of commit activity - vero-research Public
Microbial-Ecology-Group/vero-research’s past year of commit activity - VARIANTplusplus Public
Microbial-Ecology-Group/VARIANTplusplus’s past year of commit activity - Mh_strain_diversity_in_cattle_populations Public
Code for manuscript "Mannheimia haemolytica strain-level diversity in cattle populations."
Microbial-Ecology-Group/Mh_strain_diversity_in_cattle_populations’s past year of commit activity - Manuscript-BeefFeedingTrial Public
Microbial-Ecology-Group/Manuscript-BeefFeedingTrial’s past year of commit activity - TCFA_cattle_GI_microbiome_tight_junctions Public
This code is for the analysis of the data for the manuscript titled: Characterizing the microbial communities and expression of tight junction proteins in the gastrointestinal tract of feedlot cattle.
Microbial-Ecology-Group/TCFA_cattle_GI_microbiome_tight_junctions’s past year of commit activity - 8782
Microbial-Ecology-Group/Bioinformatics_tools’s past year of commit activity - FDA_liver_abscess_trial Public
Microbial-Ecology-Group/FDA_liver_abscess_trial’s past year of commit activity
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