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@Edinburgh-Genome-Foundry

Edinburgh Genome Foundry

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  1. DnaFeaturesViewer DnaFeaturesViewer Public

    👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

    Python 597 92

  2. DnaChisel DnaChisel Public

    ✏️ A versatile DNA sequence optimizer

    Python 222 43

  3. DnaWeaver DnaWeaver Public

    A route planner for DNA assembly

    Python 29 9

  4. DnaCauldron DnaCauldron Public

    ⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

    Python 51 11

  5. BandWitch BandWitch Public

    💫 Computer-aided DNA assembly validation and identification from restriction digests.

    Python 15

  6. Sequeduct Sequeduct Public

    Sequencing analysis pipeline

    Nextflow 12

Repositories

Showing 10 of 72 repositories
  • easy_dna Public

    🎒 Python library to read, write, edit DNA sequences

    Edinburgh-Genome-Foundry/easy_dna’s past year of commit activity
    Python 7 MIT 0 0 0 Updated Nov 2, 2024
  • DnaChisel Public

    ✏️ A versatile DNA sequence optimizer

    Edinburgh-Genome-Foundry/DnaChisel’s past year of commit activity
    Python 222 MIT 43 13 1 Updated Oct 30, 2024
  • Ediacara Public

    Python package for interpreting sequencing data of assembled DNA constructs (plasmids)

    Edinburgh-Genome-Foundry/Ediacara’s past year of commit activity
    Python 3 GPL-3.0 0 0 0 Updated Oct 20, 2024
  • Sequeduct Public

    Sequencing analysis pipeline

    Edinburgh-Genome-Foundry/Sequeduct’s past year of commit activity
    Nextflow 12 GPL-3.0 0 1 0 Updated Oct 19, 2024
  • Plateo Public

    🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more

    Edinburgh-Genome-Foundry/Plateo’s past year of commit activity
    Python 41 MIT 7 1 0 Updated Oct 4, 2024
  • Examples Public

    Collection of Python modules and Jupyter notebook examples

    Edinburgh-Genome-Foundry/Examples’s past year of commit activity
    HTML 6 MIT 2 0 0 Updated Sep 5, 2024
  • DnaFeaturesViewer Public

    👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

    Edinburgh-Genome-Foundry/DnaFeaturesViewer’s past year of commit activity
    Python 597 MIT 92 34 3 Updated Aug 19, 2024
  • Mutator Public
    Edinburgh-Genome-Foundry/Mutator’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 13, 2024
  • Sequeduct_Methyl Public
    Edinburgh-Genome-Foundry/Sequeduct_Methyl’s past year of commit activity
    Nextflow 2 GPL-3.0 0 0 0 Updated Aug 8, 2024
  • SnapGeneReader Public Forked from IsaacLuo/SnapGeneFileReader

    👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

    Edinburgh-Genome-Foundry/SnapGeneReader’s past year of commit activity
    Python 18 MIT 14 0 0 Updated Aug 2, 2024
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