Python Examples

All the python examples can be found in the repository. You can also find many examples in the python tutorials.

Example	Result
Load an image and display it	;" />
Load an whole slide image (WSI) and display it	;" />
Convert a numpy ndarray image to a FAST image and display it
Generate tissue patches from a whole slide image WSI	;" />
Filter an image in FAST, convert it to numpy ndarrays and display it with matplotlib	;" />
Neural network segmentation of ultrasound images	;" />
Export visualization of ultrasound video segmentation to a video file	;" />
Capture individual frames of a video file, convert to images and display with matplotlib	;" />
Display orthogonal slices of 3D CT data with segmentation overlay	;" />
Display orthogonal slices of 3D MRI data with segmentation overlay	;" />
Block matching based ultrasound speckle tracking	;" />
Stream images from webcamera and apply edge detection	;" />
Stream images from Clarius ultrasound scanner and apply a non-local means (NLM) filter	;" />
Extract surface mesh from CT volume and render using GPU-based Marching Cubes algorithm	;" />
Create a rotating GIF of a 3D volume	;" />
Inject Python code into a FAST pipeline by creating a custom Python process object	;" />
GPU image processing with OpenCL in Python	;" />
Create a custom data streamer in Python	;" />
Create a custom random access streamer with playback GUI in Python	;" />
Creating a Qt GUI with PySide2 along FAST	;" />
Using FAST in an existing PySide2 application	;" />
Real-time line plotting	;" />
Controlling a FAST surface extraction pipeline with a Qt GUI using PySide2	;" />
Stream ultrasound file format (UFF) data, apply non-local means and display	;" />
Stream ultrasound file format (UFF) data and display with matplotlib	;" />
Perform envelope detection, log compression and scan conversion on ultrasound IQ data	;" />
Beamform ultrasound file format (UFF) data with VBeam and process & visualize with FAST	;" />