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Symmetric Positive 4th Order Tensors & Their Estimation from Diffusion Weighted MRI

  • Conference paper
Information Processing in Medical Imaging (IPMI 2007)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 4584))

Abstract

In Diffusion Weighted Magnetic Resonance Image (DW-MRI) processing a 2nd order tensor has been commonly used to approximate the diffusivity function at each lattice point of the DW-MRI data. It is now well known that this 2nd-order approximation fails to approximate complex local tissue structures, such as fibers crossings. In this paper we employ a 4th order symmetric positive semi-definite (PSD) tensor approximation to represent the diffusivity function and present a novel technique to estimate these tensors from the DW-MRI data guaranteeing the PSD property. There have been several published articles in literature on higher order tensor approximations of the diffusivity function but none of them guarantee the positive semi-definite constraint, which is a fundamental constraint since negative values of the diffusivity coefficients are not meaningful. In our methods, we parameterize the 4th order tensors as a sum of squares of quadratic forms by using the so called Gram matrix method from linear algebra and its relation to the Hilbert’s theorem on ternary quartics. This parametric representation is then used in a nonlinear-least squares formulation to estimate the PSD tensors of order 4 from the data. We define a metric for the higher-order tensors and employ it for regularization across the lattice. Finally, performance of this model is depicted on synthetic data as well as real DW-MRI from an isolated rat hippocampus.

This research was in part funded by the NIH grants NS42075 & EB007082 to BCV, and in part by the University of Florida Alumni Fellowship to AB.

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References

  • Amaral, D., Witter, M.: Hippocampal formation. In The Rat Nervous System, pp. 443–493. Academic Press, San Diego (1995)

    Google Scholar 

  • Barmpoutis, A., Vemuri, B.C., Forder, J.R.: Robust tensor splines for approximation of Diffusion Tensor MRI data. In: Proceedings of MMBIA06, pp. 86–86, 17-18 June 2006 (2006)

    Google Scholar 

  • Basser, P.J., Mattiello, J., Lebihan, D.: Estimation of the Effective Self-Diffusion Tensor from the NMR Spin Echo. J. Magn. Reson. B 103, 247–254 (1994)

    Article  Google Scholar 

  • Basser, P.J., Pajevic, S.: A normal distribution for tensor-valued random variables: Applications to diffusion tensor MRI. IEEE Trans. on Medical Imaging 22, 785–794 (2003)

    Article  Google Scholar 

  • Basser, P.J., Pajevic, S.: Spectral decomposition of a 4th-order covariance tensor: Applications to diffusion tensor MRI. Signal Processing 87, 220–236 (2007)

    Article  Google Scholar 

  • Descoteaux, M., Angelino, E., Fitzgibbons, S., Deriche, R.: A fast and robust odf estimation algorithm in q-ball imaging. In: International Symposium on Biomedical Imaging: From Nano to Macro 2006, pp. 81–84 (2006)

    Google Scholar 

  • Fletcher, P., Joshi, S.: Principal geodesic analysis on symmetric spaces: Statistics of diffusion tensors. In: Proc. of CVAMIA 2004, pp. 87–98 (2004)

    Google Scholar 

  • Hilbert, D.: Ãœber die darstellung definiter formen als summe von formenquadraten. Math. Ann. 32, 342–350 (1888)

    Article  Google Scholar 

  • Özarslan, E., Mareci, T.H.: Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging. Magn. Reson. Med. 50(5), 955–965 (2003)

    Article  Google Scholar 

  • Özarslan, E., Shepherd, T.M., Vemuri, B.C., Blackband, S.J., Mareci, T.H.: Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT). NeuroImage 31, 1086–1103 (2006)

    Article  Google Scholar 

  • Özarslan, E., Vemuri, B.C., Mareci, T.: Fiber orientation mapping using generalized diffusion tensor imaging. In: ISBI, pp. 1036–1038 (2004)

    Google Scholar 

  • Pennec, X., Fillard, P., Ayache, N.: A Riemannian framework for tensor computing. International Journal of Computer Vision, 65 (2005)

    Google Scholar 

  • Powers, V., Reznick, B.: Notes towards a constructive proof of Hilbert’s theorem on ternary quartics. In: Quadratic Forms and Their Applications (Dublin, 1999), Contemp. Math. 272, Am. Math. Soc. Providence, RI, pp. 209–227 (2000)

    Google Scholar 

  • Rudin, W.: Sums of squares of polynomials. Am. Math. Monthly 107, 813–821 (2000)

    Article  MATH  Google Scholar 

  • Söderman, O., Jönsson, B.: Restricted diffusion in cylindrical geometry. J. Magn. Reson. A 117, 94–97 (1995)

    Google Scholar 

  • Squire, L., Stark, C., Clark, R.: The medial temporal lobe. Annu. Rev. Neurosci. 27, 279–306 (2004)

    Article  Google Scholar 

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Nico Karssemeijer Boudewijn Lelieveldt

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Barmpoutis, A., Jian, B., Vemuri, B.C., Shepherd, T.M. (2007). Symmetric Positive 4th Order Tensors & Their Estimation from Diffusion Weighted MRI. In: Karssemeijer, N., Lelieveldt, B. (eds) Information Processing in Medical Imaging. IPMI 2007. Lecture Notes in Computer Science, vol 4584. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-73273-0_26

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  • DOI: https://doi.org/10.1007/978-3-540-73273-0_26

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-73272-3

  • Online ISBN: 978-3-540-73273-0

  • eBook Packages: Computer ScienceComputer Science (R0)

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