Abstract
The emergence of heterogeneous cellular state in uniform environment was studied. Using a continuous culture system which provides homogeneous culture environment, we investigated the fluctuation in expression level of glnA gene in a cell population. As results, we found that the expression level of glnA gene in the cells exhibit a large fluctuation (with two orders of magnitude of protein number), even though expression of the gene is essential for cellular growth and the environment is homogeneous. Furthermore, among several steady states, the transient processes of such heterogeneous cell population were investigated, by changing environmental conditions. The results showed that cells can respond to environmental changes even when their intra-cellular state is accompanied by fluctuations. These results may provide a clue to understand why biological systems can maintain and reproduce themselves robustly.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
Similar content being viewed by others
References
Natarajan, A., Srienc, F.: Glucose uptake rates of single E. coli cells grown in glucose-limited chemostat cultures. J. Microbiol Methods 42(1), 87–96 (2000)
Natarajan, A., Srienc, F.: Dynamics of glucose uptake by single Escherichia coli cells. Metab Eng. 1(4), 320–333 (1999)
Xu, W.-Z., Kashiwagi, A., Yomo, T., Urabe, I.: Fate of a mutant emerging at the initial stage of evolution. Researches on Population Ecology 38, 231–237 (1996)
Zhang, G., Gurtu, V., Kain, S.R.: An enhanced green fluorescent protein allows sensitive detection of gene transfer in mammalian cells. Biochem. Biophys. Res. Commun. 227(3), 707–711 (1996)
Atkinson, M.R., Blauwkamp, T.A., Bondarenko, V., Studitsky, V., Ninfa, A.J.: Activation of glnA,glnK, and nac Promoters as Escherihia coli Nitrogen Starvation. Journal of Bacteriology 184(19), 5358–5363 (2002)
Ueno-Nishio, S., Backman, K.C., Magasanik, B.: Regulation at the glnL-Operator-Promoter of the Complex glnALG Operon of Escherichi coli. Journal of Bacterioloty, 1247–1251 (March 1983)
De Boar, H.A., Comstock, L.L., Vaser, M.: The tac promoter: A functional hybrid derived from the trp and lac promoters. PNAS 80(1), 21–25 (1983)
Butler, G.J., Wolkowicz, G.S.K.: A mathematical model of the chemostat with a general class of functions describing nutrient uptake. SIAM Journal of Applied Mathematics 45, 138–151 (1985)
Bailey, J.E., Ollis, D.F.: Biochemical Engineering Fundamentals. McGraw-Hill, New York (1986)
Rosenfeld, N., Young, J.W., Alon, U., Swain, R.S., Elowitz, M.B.: Gene Regulation at the Single-Cell Level. Science 307, 1962–1965 (2005)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2006 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Yamada, T. et al. (2006). Analysis of Fluctuation in Gene Expression Based on Continuous Culture System. In: Ijspeert, A.J., Masuzawa, T., Kusumoto, S. (eds) Biologically Inspired Approaches to Advanced Information Technology. BioADIT 2006. Lecture Notes in Computer Science, vol 3853. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11613022_12
Download citation
DOI: https://doi.org/10.1007/11613022_12
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-31253-6
Online ISBN: 978-3-540-32438-6
eBook Packages: Computer ScienceComputer Science (R0)