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Luana Licata
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2020 – today
- 2023
- [j22]Simona Panni, Kalpana Panneerselvam
, Pablo Porras, Margaret J. Duesbury, Livia Perfetto, Luana Licata
, Henning Hermjakob
, Sandra E. Orchard
:
The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study. Database J. Biol. Databases Curation 2023 (2023) - [j21]Prisca Lo Surdo, Marta Iannuccelli, Silvia Contino, Luisa Castagnoli, Luana Licata
, Gianni Cesareni, Livia Perfetto
:
SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update. Nucleic Acids Res. 51(D1): 631-637 (2023) - 2022
- [j20]Noemi del-Toro
, Anjali Shrivastava
, Eliot Ragueneau
, Birgit Meldal
, Colin W. Combe, Elisabet Barrera
, Livia Perfetto
, Karyn How, Prashansa Ratan, Gautam Shirodkar, Odilia Lu
, Bálint Mészáros
, Xavier Watkins, Sangya Pundir
, Luana Licata
, Marta Iannuccelli, Matteo Pellegrini
, Maria Jesus Martin
, Simona Panni
, Margaret J. Duesbury, Sylvain D. Vallet
, Juri Rappsilber, Sylvie Ricard-Blum
, Gianni Cesareni, Lukasz Salwínski, Sandra E. Orchard
, Pablo Porras
, Kalpana Panneerselvam
, Henning Hermjakob
:
The IntAct database: efficient access to fine-grained molecular interaction data. Nucleic Acids Res. 50(D1): 648-653 (2022) - 2021
- [j19]Vasundra Touré, Steven Vercruysse
, Marcio Luis Acencio
, Ruth C. Lovering
, Sandra E. Orchard
, Glyn Bradley, Cristina Casals-Casas, Claudine Chaouiya, Noemi del-Toro, Åsmund Flobak
, Pascale Gaudet
, Henning Hermjakob
, Charles Tapley Hoyt
, Luana Licata
, Astrid Lægreid, Christopher J. Mungall, Anne Niknejad, Simona Panni, Livia Perfetto, Pablo Porras
, Dexter Pratt
, Julio Saez-Rodriguez
, Denis Thieffry
, Paul D. Thomas
, Dénes Türei, Martin Kuiper
:
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). Bioinform. 36(24): 5712-5718 (2021) - [j18]Michael G. Leeming
, Sean O'Callaghan, Luana Licata
, Marta Iannuccelli, Prisca Lo Surdo, Elisa Micarelli, Ching-Seng Ang
, Shuai Nie
, Swati Varshney
, Sadia Ameen, Heung-Chin Cheng
, Nicholas A. Williamson
:
Phosphomatics: interactive interrogation of substrate-kinase networks in global phosphoproteomics datasets. Bioinform. 37(11): 1635-1636 (2021) - 2020
- [j17]Livia Perfetto
, Chiara Pastrello
, Noemi del-Toro
, Margaret J. Duesbury, Marta Iannuccelli, Max Kotlyar, Luana Licata
, Birgit Meldal
, Kalpana Panneerselvam, Simona Panni
, N. Rahimzadeh, Sylvie Ricard-Blum
, Lukasz Salwínski, Anjali Shrivastava
, Gianni Cesareni, Matteo Pellegrini, Sandra E. Orchard
, Igor Jurisica, Henning Hermjakob
, Pablo Porras
:
The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions. Database J. Biol. Databases Curation 2020 (2020) - [j16]Rachel Drysdale, Charles E. Cook
, Robert Petryszak, Vivienne Baillie Gerritsen, Mary Barlow, Elisabeth Gasteiger, Franziska Gruhl
, Jürgen Haas, Jerry Lanfear, Rodrigo Lopez
, Nicole Redaschi
, Heinz Stockinger
, Daniel Teixeira, Aravind Venkatesan
, Alex Bateman
, Alan J. Bridge, Guy Cochrane
, Robert D. Finn
, Frank Oliver Glöckner, Marc Hanauer, Thomas M. Keane, Andrew Leach, Luana Licata
, Per Oksvold, Sandra E. Orchard
, Christine A. Orengo, Helen E. Parkinson
, Bengt Persson, Pablo Porras
, Jordi Rambla, Ana Rath, Charlotte Rodwell, Ugis Sarkans
, Dietmar Schomburg, Ian Sillitoe, J. Dylan Spalding
, Mathias Uhlén
, Sameer Velankar
, Juan Antonio Vizcaíno
, Kalle von Feilitzen, Christian von Mering, Andrew D. Yates
, Niklas Blomberg
, Christine Durinx
, Johanna R. McEntyre
:
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences. Bioinform. 36(8): 2636-2642 (2020) - [j15]Marta Iannuccelli, Elisa Micarelli
, Prisca Lo Surdo, Alessandro Palma
, Livia Perfetto
, Ilaria Rozzo, Luisa Castagnoli, Luana Licata
, Gianni Cesareni:
CancerGeneNet: linking driver genes to cancer hallmarks. Nucleic Acids Res. 48(Database-Issue): D416-D421 (2020) - [j14]Luana Licata
, Prisca Lo Surdo, Marta Iannuccelli, Alessandro Palma
, Elisa Micarelli
, Livia Perfetto
, Daniele Peluso, Alberto Calderone, Luisa Castagnoli, Gianni Cesareni:
SIGNOR 2.0, the SIGnaling Network Open Resource 2.0: 2019 update. Nucleic Acids Res. 48(Database-Issue): D504-D510 (2020)
2010 – 2019
- 2019
- [j13]Livia Perfetto
, Marcio Luis Acencio
, Glyn Bradley, Gianni Cesareni, Noemi del-Toro
, Dávid Fazekas, Henning Hermjakob
, Tamás Korcsmáros
, Martin Kuiper, Astrid Lægreid, Prisca Lo Surdo, Ruth C. Lovering
, Sandra E. Orchard
, Pablo Porras
, Paul D. Thomas
, Vasundra Touré, John Zobolas
, Luana Licata
:
CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. Bioinform. 35(19): 3779-3785 (2019) - 2018
- [j12]M. Sivade Dumousseau, Diego Alonso-López
, Mais G. Ammari, Glyn Bradley, Nancy H. Campbell
, Arnaud Céol
, Gianni Cesareni, Colin W. Combe
, Javier De Las Rivas
, Noemi del-Toro
, Joshua Heimbach, Henning Hermjakob
, Igor Jurisica, Maximilian Koch
, Luana Licata
, Ruth C. Lovering
, David J. Lynn
, Birgit H. M. Meldal
, Gos Micklem, Simona Panni
, Pablo Porras
, Sylvie Ricard-Blum
, Bernd Roechert, Lukasz Salwínski
, Anjali Shrivastava
, Julie M. Sullivan, Nicolas Thierry-Mieg
, Yo Yehudi
, Kim Van Roey, Sandra E. Orchard
:
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. BMC Bioinform. 19(1): 134:1-134:8 (2018) - [j11]Prisca Lo Surdo, Alberto Calderone, Marta Iannuccelli, Luana Licata
, Daniele Peluso, Luisa Castagnoli
, Gianni Cesareni, Livia Perfetto
:
DISNOR: a disease network open resource. Nucleic Acids Res. 46(Database-Issue): D527-D534 (2018) - 2017
- [c2]Alberto Calderone, Luana Licata, Elisa Micarelli, Livia Perfetto, Gianni Cesareni:
Revealing Disease Similarities by Text Mining. SWAT4LS 2017 - [c1]Claudio Carta, Marco Roos, Annika Jacobsen, Rajaram Kaliyaperumal, Mark Thompson, Mark D. Wilkinson, Ronald Cornet, Andra Waagmeester, David van Enckevort, Mascha Jansen, Luana Licata, Allegra Via, Domenica Taruscio:
The FAIRification of Data and the Potential of FAIR Resources Demonstrated, in Practice, at the Rome Bring Your Own Data Workshop. SWAT4LS 2017 - 2016
- [j10]Jon C. Ison
, Kristoffer Rapacki, Hervé Ménager
, Matús Kalas
, Emil Rydza, Piotr Chmura
, Christian Anthon
, Niall Beard
, Karel Berka
, Dan M. Bolser
, Tim Booth
, Anthony Bretaudeau, Jan Brezovsky
, Rita Casadio
, Gianni Cesareni, Frederik Coppens
, Michael Cornell, Gianmauro Cuccuru
, Kristian Davidsen, Gianluca Della Vedova
, Tunca Dogan
, Olivia Doppelt-Azeroual
, Laura Emery, Elisabeth Gasteiger
, Thomas Gatter, Tatyana Goldberg, Marie Grosjean
, Björn A. Grüning
, Manuela Helmer-Citterich
, Hans Ienasescu, Vassilios Ioannidis
, Martin Closter Jespersen, Rafael C. Jiménez
, Nick S. Juty, Peter Juvan, Maximilian Koch, Camille Laibe
, Jing-Woei Li, Luana Licata
, Fabien Mareuil
, Ivan Micetic
, Rune Møllegaard Friborg, Sébastien Moretti
, Chris Morris
, Steffen Möller, Aleksandra Nenadic, Hedi Peterson
, Giuseppe Profiti
, Peter M. Rice, Paolo Romano
, Paola Roncaglia, Rabie Saidi
, Andrea Schafferhans
, Veit Schwämmle
, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger
, Radka Svobodová Vareková
, Silvio C. E. Tosatto
, Victor de la Torre, Paolo Uva
, Allegra Via, Guy Yachdav, Federico Zambelli
, Gert Vriend, Burkhard Rost
, Helen E. Parkinson
, Peter Løngreen, Søren Brunak
:
Tools and data services registry: a community effort to document bioinformatics resources. Nucleic Acids Res. 44(Database-Issue): 38-47 (2016) - [j9]Livia Perfetto
, Leonardo Briganti, Alberto Calderone, Andrea Cerquone Perpetuini, Marta Iannuccelli, Francesca Langone
, Luana Licata
, Milica Marinkovic, Anna Mattioni, Theodora Pavlidou, Daniele Peluso, Lucia Lisa Petrilli
, Stefano Pirrò
, Daniela Posca, Elena Santonico
, Alessandra Silvestri
, Filomena Spada, Luisa Castagnoli
, Gianni Cesareni:
SIGNOR: a database of causal relationships between biological entities. Nucleic Acids Res. 44(Database-Issue): 548-554 (2016) - 2015
- [j8]Birgit H. M. Meldal
, Oscar Forner-Martinez
, Maria C. Costanzo, Jose M. Dana
, Janos Demeter
, Marine Dumousseau, Selina S. Dwight, Anna Gaulton
, Luana Licata
, Anna N. Melidoni
, Sylvie Ricard-Blum
, Bernd Roechert, Marek S. Skrzypek, Manu Tiwari
, Sameer Velankar
, Edith D. Wong, Henning Hermjakob
, Sandra E. Orchard:
The complex portal - an encyclopaedia of macromolecular complexes. Nucleic Acids Res. 43(Database-Issue): 479-484 (2015) - [j7]Alberto Calderone
, Luana Licata
, Gianni Cesareni:
VirusMentha: a new resource for virus-host protein interactions. Nucleic Acids Res. 43(Database-Issue): 588-592 (2015) - 2014
- [j6]Sandra E. Orchard
, Mais G. Ammari, Bruno Aranda, Lionel Breuza
, Leonardo Briganti, Fiona Broackes-Carter, Nancy H. Campbell
, Gayatri Chavali, Carol Chen
, Noemi del-Toro
, Margaret J. Duesbury
, Marine Dumousseau, Eugenia Galeota
, Ursula Hinz, Marta Iannuccelli, Sruthi Jagannathan, Rafael C. Jiménez
, Jyoti Khadake, Astrid Lægreid, Luana Licata
, Ruth C. Lovering
, Birgit Meldal
, Anna N. Melidoni
, Mila Milagros, Daniele Peluso, Livia Perfetto
, Pablo Porras, Arathi Raghunath, Sylvie Ricard-Blum
, Bernd Roechert, Andre Stutz, Michael Tognolli
, Kim Van Roey, Gianni Cesareni
, Henning Hermjakob
:
The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res. 42(Database-Issue): 358-363 (2014) - 2013
- [j5]Cecilia N. Arighi
, Ben Carterette, K. Bretonnel Cohen, Martin Krallinger
, W. John Wilbur, Petra Fey
, Robert J. Dodson, Laurel Cooper, Ceri E. Van Slyke
, Wasila M. Dahdul
, Paula M. Mabee
, Donghui Li
, Bethany R. Harris, Marc Gillespie
, Silvia Jimenez, Phoebe M. Roberts, Lisa Matthews
, Kevin G. Becker
, Harold J. Drabkin, Susan M. Bello, Luana Licata
, Andrew Chatr-aryamontri, Mary L. Schaeffer, Julie Park, Melissa A. Haendel
, Kimberly Van Auken, Yuling Li, Juancarlos Chan, Hans-Michael Müller, Hong Cui
, James P. Balhoff
, Chi-Yang Wu, Zhiyong Lu, Chih-Hsuan Wei
, Catalina O. Tudor, Kalpana Raja, Suresh Subramani, Jeyakumar Natarajan, Juan Miguel Cejuela, Pratibha Dubey, Cathy H. Wu
:
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task. Database J. Biol. Databases Curation 2013 (2013) - 2012
- [j4]Luana Licata
, Leonardo Briganti, Daniele Peluso, Livia Perfetto
, Marta Iannuccelli, Eugenia Galeota
, Francesca Sacco, Anita Palma
, Aurelio Nardozza, Elena Santonico
, Luisa Castagnoli
, Gianni Cesareni:
MINT, the molecular interaction database: 2012 update. Nucleic Acids Res. 40(Database-Issue): 857-861 (2012) - 2011
- [j3]Martin Krallinger
, Miguel Vazquez
, Florian Leitner
, David Salgado
, Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto
, Leonardo Briganti, Luana Licata
, Marta Iannuccelli, Luisa Castagnoli
, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi
, Robert Leaman, Graciela Gonzalez
, Sérgio Matos
, Sun Kim, W. John Wilbur, Luis M. Rocha
, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu:
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. BMC Bioinform. 12(S-8): S3 (2011) - [j2]Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto
, Leonardo Briganti, Luana Licata
, Marta Iannuccelli, Luisa Castagnoli
, Gianni Cesareni, Mike Tyers:
Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases. BMC Bioinform. 12(S-8): S8 (2011) - 2010
- [j1]Arnaud Céol
, Andrew Chatr-aryamontri, Luana Licata
, Daniele Peluso, Leonardo Briganti, Livia Perfetto
, Luisa Castagnoli
, Gianni Cesareni:
MINT, the molecular interaction database: 2009 update. Nucleic Acids Res. 38(Database-Issue): 532-539 (2010)
Coauthor Index
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