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ORCIDEkaterina Buyko
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2010 – 2019
- 2012
[c15]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler:
Active Learning-Based Corpus Annotation - The PathoJen Experience. AMIA 2012- [c14]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler, Jenny Traumüller, Susann Schröder, Kerstin Hornbostel:
Iterative Refinement and Quality Checking of Annotation Guidelines - How to Deal Effectively with Semantically Sloppy Named Entity Types, such as Pathological Phenomena. LREC 2012: 3881-3885 - [c13]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The Extraction of Pharmacogenetic and Pharmacogenomic Relations - A Case Study Using PharmGKB. Pacific Symposium on Biocomputing 2012: 376-387 - 2011
- [j4]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus. J. Biomed. Semant. 2(S-5): S11 (2011) - [j3]Yoshinobu Kano, Jari Björne, Filip Ginter, Tapio Salakoski, Ekaterina Buyko, Udo Hahn, K. Bretonnel Cohen, Karin Verspoor
, Christophe Roeder, Lawrence E. Hunter, Halil Kilicoglu, Sabine Bergler, Sofie Van Landeghem, Thomas Van Parys, Yves Van de Peer, Makoto Miwa, Sophia Ananiadou, Mariana L. Neves, Alberto D. Pascual-Montano, Arzucan Özgür, Dragomir R. Radev, Sebastian Riedel, Rune Sætre, Hong-Woo Chun, Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, Jun'ichi Tsujii:
U-Compare bio-event meta-service: compatible BioNLP event extraction services. BMC Bioinform. 12: 481 (2011) - [j2]Ekaterina Buyko, Erik Faessler, Joachim Wermter, Udo Hahn:
Syntactic Simplification and Semantic Enrichment - Trimming Dependency Graphs for Event Extraction. Comput. Intell. 27(4): 610-644 (2011) - [c12]Ekaterina Buyko, Jörg Linde, Steffen Priebe, Udo Hahn:
Towards Automatic Pathway Generation from Biological Full-Text Publications. IDA 2011: 67-79 - [c11]Ekaterina Buyko, Udo Hahn:
Generating Semantics for the Life Sciences via Text Analytics. ICSC 2011: 193-196 - 2010
- [j1]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
Calbc Silver Standard Corpus. J. Bioinform. Comput. Biol. 8(1): 163-179 (2010) - [c10]Ekaterina Buyko, Udo Hahn:
Evaluating the Impact of Alternative Dependency Graph Encodings on Solving Event Extraction Tasks. EMNLP 2010: 982-992 - [c9]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The GeneReg Corpus for Gene Expression Regulation Events - An Overview of the Corpus and its In-Domain and Out-of-Domain Interoperability. LREC 2010 - [c8]Dietrich Rebholz-Schuhmann, Antonio José Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Katrin Tomanek, Elena Beisswanger, Udo Hahn:
The CALBC Silver Standard Corpus for Biomedical Named Entities - A Study in Harmonizing the Contributions from Four Independent Named Entity Taggers. LREC 2010 - [c7]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC silver standard corpus. Semantic Mining in Biomedicine 2010
2000 – 2009
- 2009
- [c6]Ekaterina Buyko, Erik Faessler, Joachim Wermter, Udo Hahn:
Event Extraction from Trimmed Dependency Graphs. BioNLP@HLT-NAACL (Shared Task) 2009: 19-27 - [c5]Udo Hahn, Katrin Tomanek, Ekaterina Buyko, Jung-Jae Kim, Dietrich Rebholz-Schuhmann:
How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions. BioNLP@HLT-NAACL 2009: 37-45 - 2008
- [c4]Ekaterina Buyko, Udo Hahn:
Are Morpho-Syntactic Features More Predictive for the Resolution of Noun Phrase Coordination Ambiguity than Lexico-Semantic Similarity Scores? COLING 2008: 89-96 - [c3]Ekaterina Buyko, Christian Chiarcos, Antonio Pareja-Lora:
Ontology-Based Interface Specifications for a NLP Pipeline Architecture. LREC 2008 - [c2]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Michael Poprat, Katrin Tomanek, Joachim Wermter:
Semantic Annotations for Biology: a Corpus Development Initiative at the Jena University Language & Information Engineering (JULIE) Lab. LREC 2008 - 2007
- [c1]Udo Hahn, Ekaterina Buyko, Katrin Tomanek, Scott Piao, John McNaught, Yoshimasa Tsuruoka, Sophia Ananiadou:
An Annotation Type System for a Data-Driven NLP Pipeline. LAW@ACL 2007: 33-40
Coauthor Index
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