How reliably can we predict the reliability of protein structure predictions? (Q30368057): Difference between revisions

From Wikidata

Jump to navigation Jump to search

Browse history interactively

← Older edit Newer edit →

Revision as of 02:04, 4 January 2023

scientific article

Language	Label	Description	Also known as
English	How reliably can we predict the reliability of protein structure predictions?	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

How reliably can we predict the reliability of protein structure predictions? (English)

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

protein structure prediction

0 references

author name string

István Miklós

1

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Adám Novák

2

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Balázs Dombai

3

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Jotun Hein

4

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

publication date

3 March 2008

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

9

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

137

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

copyright license

Creative Commons Attribution 2.0 Generic

3 March 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-137

0 references

Ab initio protein structure prediction using chunk-TASSER

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Ab initio modeling of small proteins by iterative TASSER simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

BAli-Phy: simultaneous Bayesian inference of alignment and phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Joint Bayesian Estimation of Alignment and Phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

An algorithm for progressive multiple alignment of sequences with insertions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Bayesian coestimation of phylogeny and sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

An expectation maximization algorithm for training hidden substitution models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Ab initio protein structure prediction via a combination of threading, lattice folding, clustering, and structure refinement.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Evolutionary HMMs: a Bayesian approach to multiple alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Hidden Markov models for detecting remote protein homologies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Profile hidden Markov models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

HOMSTRAD: a database of protein structure alignments for homologous families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Dynamic programming alignment accuracy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

JOY: protein sequence-structure representation and analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

On the complexity of multiple sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Hidden Markov models in computational biology. Applications to protein modeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Parametric and ensemble sequence alignment algorithms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Identification of common molecular subsequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

The alignment of sets of sequences and the construction of phyletic trees: an integrated method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Progressive sequence alignment as a prerequisite to correct phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Improvements in protein secondary structure prediction by an enhanced neural network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

An evolutionary model for maximum likelihood alignment of DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Inching toward reality: an improved likelihood model of sequence evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

3 June 2018

Transducers: an emerging probabilistic framework for modeling indels on trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

Simultaneous statistical multiple alignment and phylogeny reconstruction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

A "Long Indel" model for evolutionary sequence alignment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

Assessing variability by joint sampling of alignments and mutation rates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

Using Evolutionary Trees in Protein Secondary Structure Prediction and Other Comparative Sequence Analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

GOR method for predicting protein secondary structure from amino acid sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

Gathering them in to the fold

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

An improved algorithm for matching biological sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324098

26 November 2018

Using guide trees to construct multiple-sequence evolutionary HMMs

1 reference

https://pubmed.ncbi.nlm.nih.gov/18315874

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A hidden Markov model for progressive multiple alignment

1 reference

https://pubmed.ncbi.nlm.nih.gov/18315874

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence alignments and pair hidden Markov models using evolutionary history

1 reference

https://pubmed.ncbi.nlm.nih.gov/18315874

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-9-137

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

DBLP publication ID

journals/bmcbi/MiklosNDH08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q30368057&oldid=1802324030"