Application of Infrared
Spectroscopy Chapter 17
                 Dr. Nizam M. El-Ashgar
                  Chemistry Department
              Islamic University of Gaza
                                           1
• Infrared spectrometry is applied to the qualitative and
  quantitative determination of molecular species of all
  types.
• The most widely used region is the mid-infrared that
  extends from about 400 to 4000 cm-1 (2.5 to 25 m).
  (Absorption, reflection and emission spectra are
  employed)
• The near-infrared region from 4000 to 14,000 cm-1 (0.75
  to 2.5 m) also finds considerable use for the routine
  quantitative determination. (water, CO2, low conc.
  Hydrocarbons, amine nitrogen, many other compounds)
• The far-infrared region has been for the determination of
  the structures of inorganic and metal-organic species.
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          MID-INFRARED ABSORPTION
                SPECTROMETRY
  Sample Handling
• No good solvents exist that are transparent throughout
  the region of interest.
• As a consequence, sample handling is frequently the
  most difficult and time-consuming part of an infrared
  spectrometric analysis.
• Gases: The spectrum of a low-boiling liquid or gas can
  be obtained by permitting the sample to expand into an
  evacuated cylindrical cell equipped with suitable
  windows.
                                                      4
                       Gas samples
• A gas sample cell consists of a cylinder of glass or sometimes a metal.
The cell is closed at both ends with an appropriate window materials
(NaCl/KBr) and equipped with valves or stopcocks for introduction of the
sample.
• Long path length (10 cm) cells – used to study dilute (few molecules) or
weakly absorbing samples.
• Multipass cells – more compact and efficient instead of long-pathlength
cells. Mirrors are used so that the beam makes several passes through the
sample before exiting the cell. (Effective pathlength  10 m).
• To resolve the rotational structure of the sample, the cells must be
capable of being evacuated to measure the spectrum at reduced pressure.
• For quantitative determinations with light molecules, the cell is
sometimes pressurized in order to broaden the rotational structure and all
simpler measurement.
                                                                            5
• Solutions:
• A convenient way of obtaining infrared spectra is on
  solutions prepared to contain a known concentration
  of sample.
• This technique is somewhat limited in its
  applications, however, by the availability of solvents
  that are transparent over significant regions in the
  infrared.
Solvents:
• No single solvents is transparent throughout the
  entire mid-infrared region.
• Water and alcohols are seldom employed, not only
  because they absorb strongly, but also because they
  attack alkali-metal halides, the most common
  materials used for cell windows.
                                                      6
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    Cells:
• Sodium chloride windows are most commonly employed; even
  with care, however, their surfaces eventually become fogged due
  to absorption of moisture.
• Polishing with a buffing powder returns them to their original
  condition.
    Liquids:
•  When the amount of liquid sample is small or when a suitable
  solvent is unavailable, it is common practice to obtain spectra on
  the pure (neat) liquid.
• A drop of the neat liquid is squeezed between two rock-salt plated
  to give a layer that has a thickness of 0.01 mm or less.
• The two plates, held together are then mounted in the beam path.
  Such a technique does not give reproducible transmittance data,
  but the resulting spectra are usually satisfactory for qualitative
  investigations.                                                 8
Preparing a “Neat” IR Liquid
Sample
                               9
IR solution Cell (Quantitative analysis)
                                           10
IR Liquid Sample Cell
                        11
Carbon Tetrachloride
          no C-H!
      Cl
 Cl   C    Cl
      Cl
                    C-Cl stretch
                                   12
13
  Solids:
• Most organic compounds exhibit numerous absorption peaks
  throughout the mid-infrared region, and finding a solvent that does
  not have overlapping peaks is often impossible.
• As a consequence, spectra are often obtained on dispersions of the
  solid in a liquid or solid matrix.
  Pelleting:
• One of the most popular techniques for handling solid samples has
  been KBr pelleting.
• A milligram or less of the finely ground sample is mixed with
  about 100 mg of dried potassium bromide powder.
• The mixture is then pressed in a die at 10,000 to 15,000 pounds
  per square inch to yield a transparent disk.
• The disk is then held in the instrument beam for spectroscopic
  examination.
                                                                 14
Preparing a KBr Disk
                       15
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    Mulls (suspension):
•    Infrared spectra of solids that are not soluble in an
    infrared-transparent solvent or are not conveniently
    pelleted in KBr are often obtained by dispersing the
    analyte in a mineral oil or fluorinated hydrocarbon
    mull.
•   Mulls are formed by grinding 2 to 5 mg of the finely
    powdered sample in the presence of one or two drops
    of a heavy hydrocarbon oil (Nujol).
•    If hydrocarbon bands interfere, Fluorolube, a
    halogenated polymer, can be used.
•    The resulting mull is then examined as a film between
    flat salt plates.
                                                        18
          Determination of cell thickness
• Determination of thickness (b) : Pathlength of thin IR sample
  holder can be determined by observation of the interference
  patterns associated with constructive interference from
  reflection of light from the two internal surfaces of cell:
   – Insertion of empty cell in the light path (reference beam
      passed unobstructed to monochromator).
   – Interference fringe (maxima and minima) occurs.
   – Maxima: internal reflection of radiation by cell surfaces at
      distance of multiple N of wavelength of radiation.
   – 2b = N                 2b/N =                N = 2b/ 
   – Number if interference fringes N between two known
     wavelengths
   – N = 2b/  1 – 2b/  2                 N
                                    b=
                                       2(  2  1)    19
20
               Qualitative Analysis
• Used for identifying organic, inorganic, and biological species.
• The time required to perform a structural determination was
   reduced by a factor of ten, one hundred, or even one thousand (by
   FTIR modern instruments).
 Identification of an organic compound is a two-step process.
• The first step involves determining what functional groups are
  most likely present by examining the group frequency region.
• The second step then involves a detailed comparison of the
  spectrum of the unknown with the spectra of pure compounds that
  contain all of the functional groups found in the first step.
The fingerprint region, from 1200 to 600 cm -1 is particularly useful
  because small differences in the structure and constitution of a
  molecule result in significant changes in the appearance and
  distribution of absorption peaks in this region.
                                                                 21
                      IR Spectrum
Baseline
Absorbance/
Peak
• No two molecules will give exactly the same IR spectrum
  (except enantiomers)
• Group frequency region (Simple stretching): 1200-3500 cm-1
• Fingerprint region (Complex vibrations): 400-1200 cm-1,
  Group Frequencies:
• The approximate frequency (or wavenumber) at which an organic
  functional group, such as C=O, C=C, C—H, CC, or O—H
  absorbs infrared radiation can be calculated from the masses of
  the atoms and the force constant of the bond between them.
• These frequencies, called group frequencies, are seldom totally
  invariant  غير ثابتة القيمةbecause of interactions with other
  vibrations associated with one or both of the atoms composing the
  group.
• A range of frequencies can be assigned within which it is highly
  probable that the absorption peak for a given functional group
  will be found.
• Are usually due to stretching vibrations of
  diatomic units                           23
24
  The “Fingerprint” Region:
• Small differences in the structure and constitution of a
  molecule result in significant changes in the
  distribution of absorption peaks in this region of the
  spectrum that extends from about 1200 to 700 cm-1.
• As a consequence, a close match between two spectra
  in this fingerprint region constitutes strong evidence for
  the identity of compounds yielding the spectra.
• Exact interpretation of spectra in this region is seldom
  possible because of the complexity of the spectra.
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27
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Correlation chart: General regions of an infrared spectrum
    Note   that the blue coloured sections above the dashed line
    refer to stretching vibrations, and the green coloured band
    below the line encompasses bending vibrations.                  29
Summary of IR Absorptions
                            30
  Computer Search Systems:
• Virtually all infrared instrument manufactures now offer
  computer search systems to assist chemist in identifying
  compounds from stored infrared spectral data.
• The position and relative magnitudes of peaks in the spectrum
  of the analyte are determined and stored in memory to give a
  peak profile, which can then be compared with profiles of pure
  compounds stored.
• The computer then matches profiles and prints a list of
  compounds having spectra similar to that of the analyte.
• Usually the spectrum of the analyte and that of each potential
  match can then be shown simultaneously on the computer
  display for comparison.                                     31
32
                       Infrared interpretation
• Step 1
   – Look first for the carbonyl C=O band.
   – Look for a strong band at 1820-1660 cm-1.
    This band is usually the most intense absorption band in a
     spectrum. It will have a medium width. If you see the
     carbonyl band, look for other bands associated with
     functional groups that contain the carbonyl by going to step 2.
   – If no C=O band is present, check for alcohols and go to step
     3.
• Step 2
   – If a C=O is present you want to determine if it is part of an
     acid, an ester, or an aldehyde or ketone. At this time you may
     not be able to distinguish aldehyde from ketone.
                                                                 33
• ACID
   – Look for indications that an O-H is also present.
   – It has a broad absorption near 3300-2500 cm-1.
   – This actually will overlap the C-H stretch. There will also be
     a C-O single bond band near 1100-1300 cm-1.
   – Look for the carbonyl band near 1725-1700 cm-1.
• ESTER
   – Look for C-O absorption of medium intensity near 1300-1000
     cm-1.
   – There will be no O-H band.
                                                                  34
• ALDEHYDE
   – Look for aldehyde type C-H absorption bands. These are
     two weak absorptions to the right of the C-H stretch near
     2850 cm-1 and 2750 cm-1 and are caused by the C-H bond
     that is part of the CHO aldehyde functional group.
   – Look for the carbonyl band around 1740-1720 cm-1.
• KETONE
   – The weak aldehyde CH absorption bands will be absent.
     Look for the carbonyl CO band around 1725-1705 cm-1.
• Step 3
   – If no carbonyl band appears in the spectrum, look for an
     alcohol O-H band.
• ALCOHOL
   – Look for the broad OH band near 3600-3300 cm-1 and a C-
     O absorption band near 1300-1000 cm-1.                    35
• Step 4
   – If no carbonyl bands and no O-H bands are in the spectrum,
     check for double bonds, C=C, from an aromatic or an
     alkene.
• ALKENE
   – Look for weak absorption near 1650 cm-1 for a double bond.
     There will be a CH stretch band near 3000 cm-1.
• AROMATIC
   – Look for the benzene, C=C, double bonds which appear as
     medium to strong absorptions in the region 1650-1450 cm-1.
     The CH stretch band is much weaker than in alkenes.
                                                            36
C-H stretching region
• Alkanes C-H sp3 stretch < 3000 cm-1
• Alkenes C-H sp2 stretch > 3000 cm-1
• Alkynes C-H sp stretch ~ 3300 cm-1
• C-H Bending region
• CH2 bending ~ 1460 cm-1
• CH3 bending (asym) appears near the same value
• CH3 bending (sym) ~ 1380 cm-1
                                                   37
• Step 5
   – If none of the previous groups can be identified, you may
     have an alkane.
• ALKANE
   – The main absorption will be the C-H stretch near 3000 cm-1.
     The spectrum will be simple with another band near 1450
     cm-1.
• Step 6
   – If the spectrum still cannot be assigned you may have an
     alkyl halide.
• ALKYL BROMIDE
   – Look for the C-H stretch and a relatively simple spectrum
     with an absorption to the right of 667 cm-1.
                                                              38
         1-Hexene
sp2
C-H
                C=C
                stretch
                            out of plane
  sp3                       bendings (oops)
  C-H stretch      CH2 CH CH2 CH2 CH2 CH3
                                            39
          Toluene
sp2 sp3
C-H C-H      CH3   aromatic
                     C=C
                              aromatic oops
                                          40
          Cyclohexanol
                       OH   bending
O-H
stretch                          C-O
                                 stretch
     sp3 C-H stretch
                                           41
          1-Butanamine
                       N-H
                       bend   CH2
N-H
stretch                       CH3
doublet                       bend
     sp3 C-H stretch           CH3 CH2 CH2 CH2 NH2
                                                     42
 4-Methyl-2-pentanone
 C-H < 3000, C=O @ 1715 cm-1
                               CH3    O
                            CH3 CH CH2 C   CH3
C-H stretch   C=O stretch
                                             43
  Acetophenone
C-H stretch
     C   CH3        aromatic C=C
               conj C=O
                                   44
Strengths and Limitations
• IR alone cannot determine a structure
• Some signals may be ambiguous
• The functional group is usually indicated
• The absence of a signal is definite proof that the
  functional group is absent
• Correspondence with a known sample’s IR
  spectrum confirms the identity of the compound
                                                  45
                  Quantitative Applications
• Quantitative infrared absorption methods differ
  somewhat        from       ultraviolet/visible    molecular
  spectroscopic methods because of the greater complexity
  of the spectra, the narrowness of the absorption bands,
  and the instrumental limitations of infrared instruments.
• Quantitative data obtained with infrared instruments are
  generally significantly inferior in quality to data obtained
  with ultraviolet/visible spectrophotometers.
                                                            46
Quantitative Analysis
• IR more difficult than UV-Vis because
   – narrow bands (variation in e)
   – complex spectra
   – weak incident beam
   – low transducer sensitivity
   – solvent absorption
• IR mostly used for rapid qualitative but not quantitative
  analysis
   – Beer’s law failure
   – Long optical path-length required
   – Regular FT-IR is worse than UV-VIS
   – Exception - Tunable IR laser, quantum cascade laser,
     optical parametric oscillator, OPO.                    47
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• Absorbance measurements:
   – In UV/Vis: matched absorption cells for solvent
     and solution are employed and so
   A = log (I solvent /I solution)
   – Blank cancel out the effects of:
      • Radiation losses due to reflection
      • Scattering and absorption by solvent
      • Absorption by container windows
   – In IR: Reference cell (blank) seldom employed
     because:
      • Difficulty in obtaining identical cells.
      • IR cells have short bathlengths (difficult to
        duplicate)
      • Cell windows rapidly attacked (atmosphere &
        solvent).
• Deviations from Beer’s law
   – More common than in UV/Vis
   – IR absorption bands are relatively narrow
      • Dispersive instruments: low intensity sources
        and low sensitivity detectors require the use
        of relatively wide monochromator slit widths.
      • Non linear relationship between absorbance
        and concentration.
• Quantitative data from dispersive IR Instruments
  are less precise and accurate than those from
  UV/Vis instruments.
• FT instruments are better than dispersive ones
      Empirical calibration curves are often required
        for IR quantitative work.
•    Correction for scattering and absorption by
     solvent an cell
•    Two methods:
    1. Cell-in/cell-out:
       –   spectra of pure solvent and analyte solution obtained
           successively.
       –   The same cell is used for both measurements.
                     T0 = P0/Pr      &     Ts = P/Pr
       –   If Pr remains constant during the two measurements, then
           the transmittance of the sample with respect to solvent is
           obtained by
                              T = Ts/T0 = P/P0
    2. Baseline method:
       –   Solvent transmittance assumed to be constant
           between the shoulders of the absorption peak
Large sloping background often interferes with normal spectrum.
The base line method corrects involves selection of absorption
band of the substance under analysis which is sufficiently separated
from other matrix peaks and corrected as shown below.
                                                                 52
• Typical Applications:
   – All organic and inorganic molecular species
     absorb in IR region (except homonuclear
     molecules).
   – Uniqueness of IR spectrum
   – Specificity: application to analysis of mixtures
     of closely related organic compounds
   Example: Analysis of mixture of aromatic
     hydrocarbon
   Resolution of C8H10 isomers in a mixture
     includes:
   o-xylene, m-xylene, p-xylene and ethyl
     benzene. Need to set up the correct number of
    simultaneous equations.
54
• Determination of Air Contaminants
  – Sensitive, rapid and highly specific
    methods are required.
  .
  – Table 17-3. analysis of mixtures of
    gases by computerized instrument
    Fig.16-14.
  – 20m sample cell was employed
  – Data obtained within 1 or 2 min after
    injection.
  – Table 17-4 application of IR filter
    photometer.
  – Determination of various chemicals in
    the atmosphere
• Disadvantages and Limitations to
  Quantitative IR methods:
  – Frequent non-adherence to Beer’s law
  – Complexity of spectra
     • Enhances the probability of absorption peaks
       overlapping
  – Narrowness of peaks and effects of stray
    radiation
     • Makes abs measurements dependent on slit width & λ
       setting
  – Narrow cells: lead to significant analytical
    uncertainty
  So, errors associated to IR quantitative analysis
   often cannot be reduced to the level associated
   with UV/Vis
57