Software Manual
Software Manual
Preface....................................................................................................................................1
Conventions Used in This Guide........................................................................................1
Where to Find Information..................................................................................................1
Technical Support...............................................................................................................2
Feedback............................................................................................................................2
➢ Title Bar
➢ Menu Bar
➢ Toolbar
➢ Display Window
➢ Status Bar
Title Bar
Menu Bar
Toolbar
Display Window
Status Bar
Title Bar
The Title Bar shows the data filename. When the data are changed, a “*” symbol will appear
at the end of the filename to remind you to save the data file.
➢ File Menu
➢ Pre-Process Menu
➢ Topography Menu
➢ Inversion Menu
➢ Section Menu
➢ Curve Menu
➢ Window Menu
➢ Help Menu
When you click one of the menu names, a drop-down submenu appears and displays a list of
related commands.
File Menu
The submenu under the File menu, as shown in figure 1-2, contains following commands:
The submenu under the Pre-Process menu, as shown in figure 1-3, contains following
commands:
Topography Menu
The submenu under the Topography menu, as shown in figure 1-4, contains commands
listed as follows:
Inversion
The submenu under the Inversion menu, as shown in figure 1-5, contains the commands
given below:
The submenu under the Section menu, as shown in figure 1-6, contains commands listed
as follows:
Curve Menu
The submenu under the Curve menu as shown in figure 1-7 contains following commands:
The submenu under the Window menu, as shown in figure 1-8, contains the following
commands:
Help Menu
The submenu under the Help menu as shown in figure 1-9 contains following commands:
Toolbar
As shown in figure 1-10, the button icons on the Toolbar correspond to the commonly used
commands under the menus. To run a command, click its related button icon.
To adjust the view sizes, drag the separator bar as shown in figure 1-11.
Status Bar
On the Status Bar, you will see the information related to commands or data when moving
the mouse cursor over the RTomo interface.
➢ Loading data
Loading Data
To load data, open the Load Data dialog box by clicking the Open command under the File
menu. On the dialog box as shown in figure 2-1:
(1) Select the data filename by clicking the left mouse button on the filename. After that,
the data format is automatically recognized and the corresponding parameters are
displayed at the bottom of the dialog box.
The supported data formats include ABEM, DUK, RT, and RTOMO.
➢ Array — The supported array includes Wenner Alpha, Wenner Beta, Wenner
Gamma, Pole Pole, Pole Dipole, Schlumberger, Wenner Schlumberger, Dipole
Dipole, and other general arrays. The sketch maps of these arrays are described in
Appendix 1.
➢ Starting Location — The coordinate of the 1st electrode in meters. The default value
is 0m.
➢ Wenner Schlumberger Factor — It is only valid for the Wenner Schlumberger array.
The detected depth D is the product of electrode spacing a, separation factor n, and
depth scaling factor f, D = a·n·f.
Note: If the data format is not the format of RTomo, a “~” will be appended to the original data
filename, and then the data be saved in the original filename with RTomo format.
On the Data Information dialog box as shown in figure 2-2, you can check the Number of
Electrodes, Separation Factor, and Array, or modify the following values:
➢ Spacing
➢ Starting Location
After the values are changed, click the Save button to save the parameters in data file.
On the Data Selection dialog box as shown in figure 2-3, select the data source under the
Source list and choose the data type under the Data list.
There will be only original listed if the topographic correction and tomography are not
conducted.
Except the pole-dipole array, all other arrays only have two types of data: ρ (resistivity)
and η (IP). If the data file only contains resistivity, η will not be shown.
➢ Filtering
➢ Editing
➢ Remote Correction
For the pole-dipole array, the ρsa(ηsa) and ρsb(ηsb) must be pre-processed separately.
Filtering Data
To filter data, open the Filter dialog box as shown in figure 3-1 by clicking the Filter command
under the Pre-Process menu. On the dialog box,
(1) Select the type of filter by clicking the Median, Alpha-Trimmed, or Mean radio button.
(2) If the Median or Mean option is chosen, enter the smoothing radius in the X and Y
fields below the Smoother label. You can also change the radius by clicking the arrow
button next to the fields.
The smoothing radius is the number of data points used in the median or mean filter.
(3) If the Alpha-Trimmed option is chosen, enter the value of Alpha in the Alpha field
To check the effect of filter or tune the parameters, click the Undo and Redo command under
the Pre-Process menu.
You can manually edit data in the display of color section or curves.
The Display Window are similar in figure 3-2 or figure 3-3 when the Edit Manually command
under the Pre-Process menu is clicked.
(1) Select a data point by clicking the left mouse button on the color section. After that,
the data value at the chosen data point is shown in the field on the Edit dialog box.
(2) On the Edit dialog box, enter a value in the field, and then click the Set button to
change the data value and update the display of color section.
The data point with a minimum or maximum data value can be located on a color section
when the Min or Max button on the Edit dialog box is clicked.
(1) Select a data point by clicking the left mouse button on the curves. After that, the data
value at the chosen data point is shown in the field on the Edit dialog box.
(2) Vertically drag the chosen data point with left mouse button in the Display Window to
directly change the data value and update the display of curves.
Or enter a value in the field and then click the Set button on the Edit dialog box to
change the data value and update the display of curves.
To check the effect of editing, click the Undo and Redo command on the Toolbar.
For the pole-pole array, the remote electrodes B and N are perpendicular to the survey line
and are normally placed in the opposite direction as far as possible. If the positions are not far
enough, the effect can be reduced with the Remote Correction command.
To reduce the effect of remote electrodes, open the Correction of Remote Electrodes dialog
box by clicking the Remote Correction command under the Pre-Process menu.
(1) Enter the X and Y coordinates of remote electrode B in the relevant fields below the
Electrode B label.
(2) Enter the X and Y coordinates of remote electrode N in the relevant fields below the
Electrode N label.
To check the effect of remote correction, click the Undo and Redo command on the Toolbar.
If the file contains both resistivity and IP, the correction will be automatically applied on both
types of data.
Inputting Elevation
To input elevation, open the Input Elevation dialog box by clicking the Input Elevation
command under the Topography menu.
(2) If the elevation data is based on electrode coordinates, select the Coordinates option.
By default, the elevation data uses electrode numbers.
(3) Input elevation from a text file by clicking the Load button.
The text file has two columns as shown below with the 1 st column for the electrode
number or coordinate and 2nd column for the elevation:
1, 0
10, 2.9
19, 2
25, 1.5
40, -11
50, -4.4
60, -5
…
If elevation data is not saved in a text file, go to step (2).
(4) Enter electrode numbers or coordinates and elevations in the text area below the
Electrode # (or X), Elevation label.
You can also use the Ctrl-C and Ctrl-V keys to copy and paste the elevation data from
other text editors or Windows Excel.
Next time when the data file is opened, the elevation will be automatically loaded.
Note: The electrode number always starts at 1 if the elevation data is based on electrode
numbers.
(1) Set the number of iterations by entering a value in the Maximum Iterations field, or
clicking the arrow button next to the field.
(2) Define the change of data range relative to the data average by entering values in the
Lower and Upper fields.
After the topographic correction is started, a subdirectory is created under the data file path.
The subdirectory, named as the prefix of data filename + “_pd”, saves the corrected data.
The corrected data file has the same prefix of data filename but with an extension of “.mod”.
To only display the corrected data in the Display Window after topographic correction,
choose the Topo-Corrected option by clicking the list box on the Toolbar or clicking the Data
Selection command under the File menu.
The corrected data can also be loaded with the Open command under the File menu.
➢ Run tomography
(1) Specify the number of iterations by entering a value in the Maximum Iterations field,
or clicking the arrow button next to the field.
(2) Set the limit of RMS fitting error by entering a value(%) in the RMS Convergence
Limit field.
The Data Source is automatically determined. If there is variable surface, you must first run
topographic correction and then use the Topography Corrected data as the data source.
Running Tomography
To run tomography:
(1) Click the Start command under the Inversion menu. After that, you will see the Tomo
Settings dialog box on which the OK button is replaced by the Start button as shown
in figure 5-2.
Since the tomography is time consuming, the Tomo Settings dialog box reappears to
let you double check the settings before running the tomography.
(2) Check the parameter settings, and then click the Start button to start tomography.
When the tomography is started, a subdirectory is created under the current data file path.
The subdirectory, named as the prefix of data filename + “_pd”, saves the inverse models.
The file of model has the same prefix of data filename but with an extension of “.inv”.
After starting tomography, you may click the Pause or Stop button icon on the Toolbar to
pause/resume or stop the inversion at any time.
➢ The current RMS fitting error is smaller than the RMS Convergence Limit.
If the data file contains both resistivity and IP, the tomography will be automatically applied on
both types of data.
Click the name in the Iteration list box to review the tomography results. Here, the name
shows the iteration number followed by the average fitting error in percentage.
If the Iteration list box is empty (normally after you exit the RTomo), click the Load button to
update the list.
To display the inverse model in the Display Window at the chosen iteration after the review,
choose the Inverse option by clicking the drop-down list box on the Toolbar as shown in
figure 5-5 or clicking the Data Selection command under the File menu.
The inverse model can also be loaded with the Open command under the File menu.
➢ Set the display including scale, annotation, colorbar, fonts, and title.
(1) Select the Mapping Mode by clicking the Linear or Logarithm radio button.
(2) Change the number of grades by clicking the Insert, Append, or Remove button.
(3) Enter the grade values in the cells at the Value column.
For reference, the original and the mapping data ranges are shown above the table.
When the grade values are changed, the mapping range will be updated accordingly.
To interpolate the grade values based on two cells, select a block of cells by dragging
the left mouse button over the relevant cells or clicking the left mouse button on the
first and last cells of the block while holding the Shift key (clicking the Value header
will select all cells), and then click the Value button under the Interpolate label.
(4) To plot sections with colors, turn on the Color option and then change a grade color
by double clicking the cell filled with the color under the Color column.
To interpolate the grade colors based on two cells, select a block of cells by dragging
the left mouse button over the relevant cells or clicking the left mouse button on the
first and last cells of the block while holding the Shift key (clicking the Color header
will select all cells), and then click the Color button under the Interpolate label.
To reverse the color map, click the Reverse button next to the Color check box.
(5) To plot sections with symbols, turn on the Symbol option and then set a grade symbol
by double clicking a cell under the Symbol column then selecting a symbol from the
drop-down list box in that cell.
The >> button next to the Symbol check box is to edit predefined symbols.
(6) To plot sections with contours, turn on the Contour option, and then select whether to
label the contours by clicking the Label check box, finally choose the contours to be
plotted by clicking the check boxes under the Contour column.
To plot all contours, click the On button next to the All label. To cancel all contours,
click the Off button next to the On button.
(7) Click the Apply button to update the display with the defined settings.
After defining the values, colors, and symbols, you can save the settings in a file by clicking
the Save button. The file can be loaded anytime with the Load button.
To edit predefined symbols, click the >> button to open the Symbol Editor dialog box as
shown in figure 6-3, and then:
➢ Edit a symbol by selecting a symbol name from the Symbol List box, then clicking or
dragging the left mouse button to draw or the right mouse button to erase on the grids
in the Edit panel, and finally clicking the Update button.
➢ Design the filling pattern of a symbol, as shown in the Sample panel, by selecting a
symbol name from the Symbol List box, then selecting the Shift or Skip option, and
finally clicking the Update button.
➢ Rename a symbol by selecting a symbol name from the Symbol List box, and then
changing the name in the Name field, finally clicking the Update button.
➢ Add a symbol by clicking the Add button and then editing the symbol.
➢ Click the Save button to save the symbols in the g3symbols.sym file under the
C:\Users\<username>\.geogiga directory. These symbols are shared by all applications
in Geogiga RImager and Seismic Pro.
➢ Set the display scale under the Scale label by turning off the Auto option and then
entering values in the X and Y fields.
The image size, shown in the relevant non-editable fields, is updated accordingly. When
the image size is larger than the Display Window size, the scrollbar will appear.
➢ Change the annotations of axes under the X Axis or Y Axis label by turning off the Auto
option and then entering values in the relevant Major and Minor fields.
To modify the starting coordinate of annotations, enter a value in the relevant Start field.
➢ Specify the type of tick mark by clicking the Tick Mark combo box and then selecting an
option among the None, Inside, Outside, and Cross options from the drop-down list.
If the Colorbar option is selected, click the Vertical check box to display the colorbar
vertically or horizontally. If the sections are filled with colors and symbols, click the
Value check box to annotate the colorbar with data values or symbol names.
To specify the decimal places of annotations for colorbar, enter a value in the Decimal
Places field under the Colorbar check box or click the arrow button next to the field.
➢ Display the title by turning on the Title option and then entering the name in the field
next to the option.
➢ To update the display with the defined settings, click the Apply button. To change the
fonts of annotations, click the Font Button.
To annotate the X axis with electrode numbers as shown in figure 6-5, click the Annotate
Electrode Numbers command under the Section menu. The annotation will be switched
back to coordinates if the Annotate Electrode Numbers command is re-clicked.
To hide the data points on color section as shown in figure 6-6, click the Show Data Points
command under the Section menu. The data points will be displayed if the Show Data
Points command is re-clicked.
If the Show Electrodes option is selected, the electrodes will be plotted on the X axis as
shown in figure 6-7 when you click the left mouse button on any data point.
(1) Click the Add button, and then input the well name under the Name column in the
Well List.
(2) Enter the well location and the starting depth of the well in the Location and Starting
Depth fields.
Note: The depth of a color section always starts at n·a·f, where n is the minimum of
separation factor, a is the electrode spacing, and f is the depth scaling factor. To match
the plotting of color section, the starting depth of the well should be -n·a·f, otherwise,
all the depths of well data need to subtract n·a·f.
(3) Input the depths of well data under the Depth column and select the lithologic symbol
from the Lithologic Symbols list to describe the layers.
To remove a well from the well list, click the Remove button. To save the input of well
data in a text file, click the Save button. The well data can be loaded from the text file
by clicking the Load button.
(5) Click the Apply button to plot well data in color section.
To cancel the display of well data, deselect the Show option. To specify the width for
the display of wells, enter a value in the Width field or click the arrow button next to
the field.
➢ Set the display including scale, annotation, gridlines, background, fonts and title.
➢ Select the type of data by clicking the Resistivity, Ratio, or Polarizability radio button
and then turning on the relevant check boxes.
➢ Choose the type of curves by clicking the Profile or Sounding Curve radio button.
If the Profile option is chosen, select the curves to be displayed by clicking the numbers
in the Visibility list while holding the Ctrl or Shift key.
➢ Select the mode of display by clicking the Separate, Separate Uniform, or Together
radio button.
The Separate option makes all curves individually displayed with different scales; the
Separate Uniform option makes all curves are individually displayed with a same
scale; the Together option makes all curves displayed together with a same scale.
➢ Properties – Define the style and color of gridlines, background color, and title.
Geometry
Under the Geometry tab as shown in figure 7-4, the settings are grouped by axes:
➢ X – horizontal axis
➢ Y – vertical axis
The Lower, the starting coordinate on X or Y, corresponds with the left or the bottom of
the display window. The Upper, the ending coordinate on X or Y, consists with the right
or the top of the display window.
You can reverse the curve plotting by setting the Lower bigger than the Upper. To set
the Lower or the Upper, enter a value in the relative field and click the Apply button.
The Scale defines the relative plotting size. The Autofit option fits the curve plotting in
the display window in the X or Y direction.
To change the Scale, deselect the relevant Autofit check box, and then enter a value in
the relevant Scale field , finally click the Apply button.
Another way to change the scale is to hold down the Shift key while dragging the left
mouse button on any side of X or Y or at any corner as shown in figure 7-5. To cancel
the change, click the Reset button at the bottom of the Curve Display dialog box.
The Major or Minor defines the distance between two nearest major or minor gridlines
on X or Y. The Minor is always smaller than the Major.
Click the related Gridlines check box to toggle the visibility of the Major and the Minor
gridlines in the X or Y direction.
To change the Major or the Minor interval, enter a value in the relevant field and click
the Apply button.
Toggle these options by clicking the relevant check boxes, then click the Apply button
to update the annotations.
Under the Geometry tab, the plotting range, plotting size, gridlines, and annotations have
been discussed. Next, you will see the other settings related to the curve plotting under the
Properties tab.
Under the Properties tab as shown in figure 7-6, following settings are available:
➢ Gridlines – Select the Style and Color to plot the Major or Minor gridlines.
The style includes Solid, Dash, and Dot. To change the style of gridlines, select a name
from the drop-down list under the Style label, and click the Apply button.
To change the color of gridlines, click the button filled with the current color of Major or
Minor gridlines next to the Color label.
➢ Decimal Places – Set the decimal places of annotations on the X or Y axis by entering
a value in the X or Y field .
➢ Tick Mark – Specify the type of tick mark by clicking the Tick Mark combo box and
then selecting an option among the None, Inside, Outside, and Cross options from the
drop-down list.
➢ Background – Change the color of background color by clicking the button filled with
the current background color next to the Background label.
➢ Font – Define annotation fonts for the Axis and the Title. To change the annotation
font, click the Font button.
➢ Axis Title – Enter the title of X or Y axis in the X or Y field under the Axis Title label
and then click the Apply button.
➢ Title – Change the visibility of chart title by clicking the Chart Title check box. If the
Chart Title option is turned on, input a name in the text field next to this check box and
then click the Apply button.
➢ Print Images
➢ Save Images
Outputting to RViewer
The data file processed by RTomo can be directly opened in RViewer without any conversion.
(1) Select the data to be exported by clicking the drop-down list box on the Toolbar.
(2) Open the Select Data File Name dialog box by clicking the Export Data command
under the File menu. On the dialog box as shown in figure 8-1, enter the output file
name in the File name field and then click the Save button.
(1) Select the data to be displayed by clicking the drop-down list box on the Toolbar.
(2) Open the Print dialog box by clicking the Print command under the File menu.
➢ Define the Margins by entering values in the Left and Top fields, and then click the
Refresh button to update the plotting in the Preview area.
➢ Click the Printer Setup button to change the printer settings, such as the paper size,
layout, and number of copies.
➢ Click the Print button to print the data image plotted in the Display Window.
Note: The size of output image depends on the size of image plotted in the Display Window.
To modify the size of output image, adjust the size of image plotted in the Display Window,
and then click the Refresh button to update the plotting in the Preview area.
(1) Select the data to be displayed by clicking the drop-down list box on the Toolbar.
(2) Open the Save Image dialog box by clicking the Save Image command under the
File menu.
(3) On the Save image dialog box as shown in figure 8-3, enter a name in the File name
field and click the Save button to save the image as PNG or BMP format.
Note: The size of output image depends on the size of image plotted in the Display Window.
To modify the size of output image, adjust the size of image plotted in the Display Window,
and then click the Refresh button to update the plotting in the Preview area.
Figure 8-3: Saving an image with the Save Image dialog box
4.Pole-Pole: AM
10.Wenner Schlumberger 1: AMNB (MN spacing varies with the Separator Factor)
11.Wenner Schlumberger 2: AMNB (MN spacing varies with the Separator Factor)
12.Pole-Pole Sounding: AM