Cell Biology 3rd Edition Thomas D. Pollard PDF Download
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Preface
Our goal is to explain the molecular basis of life at the of each class of molecules, so the reader learns where
cellular level. We use evolution and molecular structures the many varieties of each type of molecule came from.
to provide the context for understanding the dynamic Our goal is for readers to understand the big picture
mechanisms that support life. As research in cell biology rather than just a mass of details. For example, Chapter
advances quickly, the field may appear to grow more 16 opens with an original figure showing the evolution
complex, but we aim to show that understanding cells of all types of ion channels to provide context for each
actually becomes simpler as new general principles family of channels in the following text. Given that these
emerge and more precise molecular mechanisms replace molecular systems operate on time scales ranging from
vague concepts about biological processes. milliseconds to hours, we note (where it is relevant)
For this edition, we revised the entire book, taking the concentrations of the molecules and the rates of
the reader to the frontiers of knowledge with exciting their reactions to help readers appreciate the dynamics
new information on every topic. We start with new of life processes.
insights about the evolution of eukaryotes, followed by We present a wealth of experimental evidence in
macromolecules and research methods, including recent figures showing micrographs, molecular structures,
breakthroughs in light and electron microscopy. We and graphs that emphasize the results rather than the
begin the main part of the book with a section on basic experimental details. Many of the methods will be
molecular biology before sections on membranes, organ- new to readers. The chapter on experimental methods
elles, membrane traffic, signaling, adhesion and extracel- introduces how and why scientists use particularly
lular matrix, and cytoskeleton and cellular motility. As in important approaches (such as microscopy, classical
the first two editions, we conclude with a comprehen- genetics, genomics and reverse genetics, and biochemi-
sive section on the cell cycle, which integrates all of cal methods) to identify new molecules, map molecular
the other topics. pathways, or verify physiological functions.
Our coverage of most topics begins with an introduc- The book emphasizes molecular mechanisms because
tion to the molecular hardware and finishes with an they reveal the general principles of cellular function. As
account of how the various molecules function together a further demonstration of this generality, we use a wide
in physiological systems. This organization allows for range of experimental organisms and specialized cells
a clearer exposition of the general principles of each and tissues of vertebrate animals to illustrate these
class of molecules, since they are treated as a group general principles. We also use medical “experiments of
rather than isolated examples for each biological system. nature” to illustrate physiological functions throughout
This approach allows us to present the operation of the book, since connections have now been made
complex processes, such as signaling pathways, as an between most cellular systems and disease. The chapters
integrated whole, without diversions to introduce the on cellular functions integrate material on specialized
various components as they appear along the pathway. cells and tissues. Epithelia, for example, are covered
For example, the section on signaling mechanisms under membrane physiology and junctions; excitable
begins with chapters on receptors, cytoplasmic signal membranes of neurons and muscle under membrane
transduction proteins, and second messengers, so the physiology; connective tissues under the extracellular
reader is prepared to appreciate the dynamics of 10 criti- matrix; the immune system under connective tissue
cal signaling systems in the chapter that concludes the cells, apoptosis, and signal transduction; muscle under
section. Teachers of shorter courses may concentrate the cytoskeleton and cell motility; and stem cells and
on a subset of the examples in these systems chapters, cancer under the cell cycle and signal transduction.
or they may use parts of the “hardware” chapters as The Guide to Figures Featuring Specific Organisms
reference material. and Specialized Cells that follows the Contents lists
We use molecular structures as one starting point for figures by organism and cell. The relevant text accompa-
explaining how each cellular system operates. This nies these figures. Readers who wish to assemble a unit
edition includes more than 50 of the most important and on cellular and molecular mechanisms in the immune
revealing new molecular structures derived from elec- system, for example, will find the relevant material
tron cryomicroscopy and x-ray crystallography. We associated with the figures that cover lymphocytes/
explain the evolutionary history and molecular diversity immune system.
vii
viii PREFACE
Our Student Consult site provides links to the Protein Throughout, we have attempted to create a view of
Data Bank (PDB), so readers can use the PDB accession Cell Biology that is more than just a list of parts and
numbers in the figure legends to review original data, reactions. Our book will be a success if readers finish
display an animated molecule, or search links to the each section with the feeling that they understand better
original literature simply by clicking on the PDB number how some aspect of cellular behavior actually works at
in the online version of the text. a mechanistic level and in our bodies.
Graham T. Johnson
Jennifer Lippincott-Schwartz
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THE GRIDIRON STREETS OF THE NOISY CITY.
New York Post Office, Broadway.
CHAPTER II.
THE SECOND CITY IN THE WORLD.
A pandemonium of type-writing machines—of gigantic type-writing
machines driven by demons who never tire—in some vast hall of
Eblis. The clank of the type, the swish of the machine, the quick
nervous ring of the bell, all indefinitely multiplied and magnified, fill
the vast space with a reverberating clangour. This clangour
continuously increases until its very vibrations seem to become
clotted and fill the air with a sound that can be felt in every pore. It
is like the pressure of an atmosphere so dense you can almost cut it
with a knife, an atmosphere that is never still, but perpetually frets,
and moans, and snarls with feverish unrest.
How many machines there must be to crowd the air with this million
times multiplied misery of click and clang—ring-ring—ring-ring—and
clang and click, that never stops, but rises and falls, rhythmless and
rude, like the waves of a choppy sea on a rocky beach! Now and
again through the infernal hubbub there pierces a dreadful wail,
Greater New York has come into being in order to increase, not to
diminish, the influence of New York in the Republic and in the world
at large. This influence may be for evil. “Under the new charter,”
says Mr. W. C. De Witt, Chairman of the Committee which drafted
that document, “the City of New York at one bound becomes the
mistress of the Western hemisphere and the second city of the
world. It should be to its people what Athens was to the Greek,
Rome to the Romans, Florence to the Florentine—an object of
constant solicitude and of civic pride.”
The question whether they intend to obey the voice of their friendly
mentor is one on which the future fortune of the American
Commonwealth will largely depend. For, as Mr. J. C. Adams pointed
out in a thoughtful article on “The Municipal Threat in National
Politics,” which he contributed to the New England Magazine in July,
1891:—
The misgovernment of the cities is the prophecy of misgovernment
of the nation; just as the paralysis of the great nerve-centres means
the palsy of the whole body. There is graver danger to the republic
in the failure of good government in our cities than arises from the
moral corruption which accompanies that failure. The
misgovernment of our cities means the break-down of one of the
two fundamental principles upon which our political fabric rests. It is
the failure of local self-government in a most vital part. It is as great
a peril to the republic as the revolt against the Union. For the
republic is organised upon two great political ideas, both essential to
its existence. The first is the principle of federation, which is
embodied in the Union; the second is the principle of local self-
government, which places the business of the states and the towns
in the hands of the people who live in them. Both of these are vital
principles. The republic has survived the attempt to subvert one of
them. It has just entered on its real struggle with a serious attack
upon the other.
The fate, therefore, of the American Republic may be bound up with
the fortunes of Greater New York.
CHAPTER III.
ST. TAMMANY AND THE DEVIL.
Hitherto, the city government of New York has not been a credit to
the Republic; otherwise I should not be publishing a survey of the
way in which New York has been governed as “Satan’s Invisible
World Displayed.” The title, of course, is an adaptation, not an
invention. The original holder of the copyright was one Hopkins, of
the seventeenth century, who, having had much experience in the
discovery of witches, deemed himself an expert qualified to describe
the inner history and secret mystery of the infernal regions under
that picturesque title. I have adopted it as being on the whole the
most appropriate description of the state of abysmal abomination
into which the government of New York had sunk before the great
revolt of 1894 broke the power of Tammany—for a season—and
placed in office a Reform Government charged to cleanse the
Augean stable. The old witchfinder had no story to tell so horrible or
so incredible as that which I have drawn up from the sworn evidence
of witnesses exposed to public cross-examination before a State
Commission in the City of New York. In the reports of the infernal
Sabbats, for attending which thousands of old women were burnt or
hanged in the seventeenth century, there always figures in the
background, as the central figure in the horrid drama, a form but
half-revealed, concerning whose identity even the witchfinders speak
with awe. The weird women, with their incantations and their
broomsticks, their magic spells and their diabolical trysts, are but the
slaves of the Demon, who, whether as their lover or their torturer, is
ever their master, whose name they whisper with fear, and whose
commands they obey with instant alacrity. For the Master of
Ceremonies in the Infernal revels, the Lord of the Witches’ Sabbat, is
none other than Satan himself, the incarnate principle of Evil, the
Boss of Hell!
In the modern world, sceptical and superstitious, these tales of
witches and warlocks seem childish nonsense, unworthy of the
attention of grown-up men. But although the dramatis personæ
have changed, and the mise-en-scène, the same phenomena
reappear eternally. Here in the history of New York we have the
whole infernal phantasmagoria once again, with heelers for witches,
policemen as wizards, and secret sessions in Tammany Hall as the
Witches’ Sabbat of the new era. And behind them all, always present
but dimly seen—the omnipresent central force, whose name is
muttered with awe, and whose mandate is obeyed with speed—is
the same sombre figure whom his devotees regard with passionate
worship, and whom his enemies dread even as they curse his name.
And this modern Sathanas—this man who to every good Republican
is the most authentic incarnation of the principle of Evil, the veritable
archfiend of the political world—is the Boss of Tammany Hall.
Among the many legends which have clustered round the beginning
of the great association which has played so conspicuous a part in
the history of New York, there is one which appeals specially to the
sense of humour. Tammany, according to tradition, was the name of
a Delaware Indian who in ancient days belonged to a Redskin
confederacy that inhabited the regions now known as New Jersey
and Pennsylvania. His name has been variously spelled as Temane,
Tamanend, Taminent, Tameny, and Tammany.
Curiously enough, by a kind of metamorphosis by no means without
precedent among more historical saints, his name has been attached
to a locality which he probably never visited, and with the
inhabitants of which he and his people lived in hereditary feud. This
was not, however, due to any of his conflicts with the Mohicans, who
in those days pitched their wigwams on the island of Manhattan. He
owes it to a battle which he fought with no less a personage than
the great enemy of mankind. In the days when St. Tammany, passed
his legendary existence, there were no white men on the American
Continent; but although the Pale-Face was absent, the Black man
was in full force, and one fine day St. Tammany was exposed to the
fell onslaught of the foul fiend. At first, as is his wont, the bad spirit,
with honeyed words, sought to be admitted to a share in the
government of Tammany’s realm.
“Get thee behind me, Satan!” rendered in the choicest Delaware
dialect, was the Saint’s response to the offers of the tempter. But as
a more illustrious case attests, the Devil is not a person who will
accept a first refusal. Changing his tactics, he brought upon St.
Tammany and his Delawares many grievous afflictions of body and
of estate, and while the good Chief’s limbs were sore and his heart
was heavy, the cunning deceiver attempted to slink into the country
unawares.
St. Tammany, however, although sick and sore, slept with one eye
open, and the Devil was promptly ordered to “get out of that,” with
an emphasis which left him no option but to obey. Again and again
the Devil, renewing his attacks, tried his best to circumvent St.
Tammany, but finding that all was in vain, he at last flung patience
and strategy to the winds, and boldly attacked the great Sagamore
in order to overwhelm him by his infernal might.
Then, says the legend, ensued the most tremendous battle that has
ever been waged between man and his great enemy. For many
months the great fight went on, and as Tammany and the Devil
wrestled to and fro in mortal combat, whole forests were broken
down, and the ground was so effectually trampled under foot that it
has remained prairie land to this day. At last, after the forests had
been destroyed, and the country trodden flat, St. Tammany, catching
his adversary unawares, tripped him up, and hurled him to the
ground. It was in the nick of time, for Tammany was so exhausted
with the prolonged struggle that when he drew his scalping-knife to
make a final end of the Evil One, the fiend, to the eternal regret of
all the children of men, succeeded in slipping from Tammany’s
clutches. He escaped across the river to New York, where—so runs
the legend, as it is recorded by a writer in Harper—“he was
hospitably received by the natives, and has ever since continued to
make his home.”
Such, in the quaint but suggestive narrative of the ancient myth, is
the way in which the Devil first came to New York, where, as if in
revenge for his defeat, he seems to have christened the political
organisation which has been his headquarters after the name of
Tammany.
The Tammany organisation did not in the beginning take its rise in
New York. It first sprang into being in the ranks of the revolutionary
army of Pennsylvania. Tammany, or Tamanend, as he was then
called, was adopted by the Pennsylvanian troops under General
Washington as their patron saint. There were two reasons for this.
In the first place, it was Hobson’s choice, for St. Tammany was the
only native American who had ever been canonised; and, in the
second place, nothing seemed more appropriate to the revolutionary
heroes than to adopt as their patron saint a brave who had
“whipped the Devil.” St. Tammany, therefore, came to be adopted by
the American army as a kind of counterpart to our own St. George.
St. Tammany and the Devil seemed to be a good counterpoise to the
legendary tale of St. George and the Dragon. The 12th of May was
Tammany’s Saint’s Day, and was celebrated with wigwams, liberty
poles, tomahawks, and all the regular paraphernalia of the Redskin.
A soldier attired in Indian costume represented the great Sachem,
“and, after delivering a talk full of eloquence for law and liberty and
courage in battle to the members of the order, they danced with
feathers in their caps and buck tails dangling on behind.” The
practice spread from the Pennsylvania troops to the rest of the army,
and so popular did Tammany become that May 12th bid fair to be
much more a popular national festival than July 4th.
It was not until this century had begun that the Tammany Society
was domiciled in New York. It was introduced there by an
upholsterer of Irish descent, named William Mooney. He did not take
much stock in St. Tammany, but preferred to call his Society the
Columbian Order, in honour of Columbus. The transactions of the
Society dated from the discovery of America. Besides the European
head, who was to be known as the Great Father, there were to be
twelve Sachems, or counsellors—“Old Men” being the Indian
signification of the word; a Sagamore, or master of ceremonies; a
Wiskinkie, or doorkeeper of the sacred wigwam; and a Secretary.
The Society from its outset appears to have been political, but in its
early days it combined charity with politics. In the second year of its
existence it undertook the establishment of a Museum of Natural
History, and got together the exhibits which formed the nucleus of
Barnum’s famous museum. It was a social and convivial club, which
met first in a hotel of Broadway, then in a public-house in Broad
Street, and finally in the Pig-pen, a long room attached to a saloon
kept by one Martling. In 1811 it erected a hall of its own. Its present
address is “Tammany Hall, Fourteenth Street.”
There is no necessity to do more than glance at the curious
beginnings of a society which is perhaps the most distinctively
American of all the associations that have ever been founded in the
New World. A writer of “The Story of Tammany,” which appeared in
Harper’s Magazine many years ago, from which most of these facts
are taken, says:—
The Tammany Society, or Columbian Order, is doubtless the oldest
purely self-constituted political association in the world, and has
certainly been by far the most influential. Beginning with the
government, for it was organised within a fortnight of the
inauguration of the first President, and at a spot within the sound of
his voice as he spoke his first official words to his countrymen, it has
not only continued down to the present time—through nearly three
generations of men—but has controlled the choice of at least one
President, fixed the character of several national as well as State
administrations, given pseudonyms to half a dozen well-known
organisations, and, in fact, has shaped the destiny of the country in
several turning-points of its history.
Few suspect, much less comprehend, the extent of the influence this
purely local association has exerted. To its agency more than any
other is due the fact that for the last three-quarters of a century
New York city has been the most potent political centre in the world,
not even Paris excepted. Greater than a party, inasmuch as it has
been the master of parties, it has seen political organisation after
organisation, in whose conflicts it has fearlessly participated, arise,
flourish, and go down, and yet has stood ready, with powers
unimpaired, to engage in the struggles of the next crop of
contestants. In this experience it has been solitary and peculiar.
Imitators it has had in abundance, but not one of them has
succeeded in catching that secret of political management which has
endowed Tammany with its wonderful permanency.
What is that secret? It is unquestionably to be traced, in part, to the
sagacity which Tammany’s leaders have at all times shown in
forecasting the changes of political issues, or availing themselves of
the opportunities afforded by current events as they have arisen.
Tammany has not only furnished the most capable politicians the
country has possessed, but has managed to ally itself with the
shrewdest ones to be found outside of its own organisation. It has
always shown a willingness to trade in the gifts at its command, and
rarely indeed has it got the worst of a bargain.
FIRST TAMMANY HALL, ERECTED 1811.
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