Gene
Version 2.5p (09.08.06) Copyright 1993 - M. Borodovsky, J. McIninch
PROGRAM INFORMATION
Sequence : MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome
Analysis Date : 5/11/24 at 13:53:15
Pages : 10
Sequence Length : 18246 bp
GC Content : 38.51%
Window Length : 96 bp
Window Step : 12 bp
Threshold Value : 0.500
PS-Version : 1.2
GeneMark Options : PostScript graph,
Mark ORFs / splice sites,
List ORFs,
List regions and/or splice sites,
Matrix
notes &
comme
nts
For d
etai
Besem ls on the
e m
"Heur r J. and B odel buil
i o d
NAR, stic appro rodovsky ing proced
1999, a M. ure s
Vol. ch to deri ee:
27, N
o. 19 ving model
, pp. s
3911- for gene
3920 findi
ng"
MATRIX INFORMATION
Matrix : Heuristic, GC = 39
Author : Borodovsky Laboratory - Georgia Tech, School of Biology, Atlanta, GA, USA
Order : 2
Send questions / comments to:
Dr. M. Borodovsky
Georgia Institute of Technology
School of Biology
Atlanta, GA 30332-0230
For help or information, send electronic mail to: custserv@genepro.com, or mark@amber.biology.gatech.edu
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 2/10
1.0
0.5
0.0
400 800 1200 1600 2000
1.0
Direct Sequence
0.5
0.0
400 800 1200 1600 2000
1.0
0.5
0.0
400 800 1200 1600 2000
1.0
0.5
0.0
400 800 1200 1600 2000
Complementary Sequence
1.0
0.5
0.0
400 800 1200 1600 2000
1.0
0.5
0.0
400 800 1200 1600 2000
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 3/10
1.0
0.5
0.0
2400 2800 3200 3600 4000
1.0
Direct Sequence
0.5
0.0
2400 2800 3200 3600 4000
1.0
0.5
0.0
2400 2800 3200 3600 4000
1.0
0.5
0.0
2400 2800 3200 3600 4000
Complementary Sequence
1.0
0.5
0.0
2400 2800 3200 3600 4000
1.0
0.5
0.0
2400 2800 3200 3600 4000
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 4/10
1.0
0.5
0.0
4400 4800 5200 5600 6000
1.0
Direct Sequence
0.5
0.0
4400 4800 5200 5600 6000
1.0
0.5
0.0
4400 4800 5200 5600 6000
1.0
0.5
0.0
4400 4800 5200 5600 6000
Complementary Sequence
1.0
0.5
0.0
4400 4800 5200 5600 6000
1.0
0.5
0.0
4400 4800 5200 5600 6000
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 5/10
1.0
0.5
0.0
6400 6800 7200 7600 8000 8400
1.0
Direct Sequence
0.5
0.0
6400 6800 7200 7600 8000 8400
1.0
0.5
0.0
6400 6800 7200 7600 8000 8400
1.0
0.5
0.0
6400 6800 7200 7600 8000 8400
Complementary Sequence
1.0
0.5
0.0
6400 6800 7200 7600 8000 8400
1.0
0.5
0.0
6400 6800 7200 7600 8000 8400
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 6/10
1.0
0.5
0.0
8800 9200 9600 10000 10400
1.0
Direct Sequence
0.5
0.0
8800 9200 9600 10000 10400
1.0
0.5
0.0
8800 9200 9600 10000 10400
1.0
0.5
0.0
8800 9200 9600 10000 10400
Complementary Sequence
1.0
0.5
0.0
8800 9200 9600 10000 10400
1.0
0.5
0.0
8800 9200 9600 10000 10400
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 7/10
1.0
0.5
0.0
10800 11200 11600 12000 12400
1.0
Direct Sequence
0.5
0.0
10800 11200 11600 12000 12400
1.0
0.5
0.0
10800 11200 11600 12000 12400
1.0
0.5
0.0
10800 11200 11600 12000 12400
Complementary Sequence
1.0
0.5
0.0
10800 11200 11600 12000 12400
1.0
0.5
0.0
10800 11200 11600 12000 12400
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 8/10
1.0
0.5
0.0
12800 13200 13600 14000 14400 14800
1.0
Direct Sequence
0.5
0.0
12800 13200 13600 14000 14400 14800
1.0
0.5
0.0
12800 13200 13600 14000 14400 14800
1.0
0.5
0.0
12800 13200 13600 14000 14400 14800
Complementary Sequence
1.0
0.5
0.0
12800 13200 13600 14000 14400 14800
1.0
0.5
0.0
12800 13200 13600 14000 14400 14800
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 9/10
1.0
0.5
0.0
15200 15600 16000 16400 16800
1.0
Direct Sequence
0.5
0.0
15200 15600 16000 16400 16800
1.0
0.5
0.0
15200 15600 16000 16400 16800
1.0
0.5
0.0
15200 15600 16000 16400 16800
Complementary Sequence
1.0
0.5
0.0
15200 15600 16000 16400 16800
1.0
0.5
0.0
15200 15600 16000 16400 16800
Nucleotide Position
GeneMark.hmm prediction
MK801755.1 Henipavirus nipahense isolate CSUR381, complete genome, Order 2, Window 96, Step 12, 10/10
1.0
0.5
0.0
17200 17600 18000 18400 18800
1.0
Direct Sequence
0.5
0.0
17200 17600 18000 18400 18800
1.0
0.5
0.0
17200 17600 18000 18400 18800
1.0
0.5
0.0
17200 17600 18000 18400 18800
Complementary Sequence
1.0
0.5
0.0
17200 17600 18000 18400 18800
1.0
0.5
0.0
17200 17600 18000 18400 18800
Nucleotide Position
