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DMA Strackure aia:
Le pyinidine 1 bind with 0 004
NTE
DJA tie stand of polyrucleatde
Ie Stractune,
Tre ord of nuclabiles in A strand
\purcithen inthe 5” toa fhe
bez Phasphoke gmp) L, bree ot group
HKiscead ia the 5 bo clveclio dep
The bro strands. un anbiporallel VEE
a
Cras lint
x the seyunce of bofes determines the calng sh
OF DUA (ganic. intoowabion)
2 on strichune
+ Able bebix (B form) met commen physiol gical farm
xcharaderestics
Tare contiparalteltsiands ns cght hanced belig (5 J
pod! to “aechae, Col ocasact a ass a,
Deomplarentong howe pang - Adenine =Teymine
capborines Goon /rat Az nds nhGanet C
Duh shawl a2 hanplate. bor synttesis of ren complemonkow,
shoad_ ba tocen bane laughter DUA mebcles
age stackiny : the batge pairs cracked alone each atve
buy van der wisals torees. sc hydrophobic infeacians
x stebihy of Hoe helix prouised bay
1) vamclee wats abtcackion > qurecahes ak van dec waals datorcelosoin
[2 hgrophabicinlcachins. 2) hylapn dong bebacen compat pen
Dimensions
pin cach comphele bunn Here is 10 Baiee fice
Q):- Gabel Hee nanos of base peic in U nebical burn of DUB 240 Dave poirs (oneheical compte: ban = 10 Bare pues) xDe nitions Leche 2
Rupture of hydrogen
TEESE bonds and separation of
the two strands
Question DNA'T rich in Tih tote pecs, DAD" richin GHC bare pars . Which onlrs higher velhiny temperate’)
Awsusut = DAIA"D" has Winhea melbiow leapucoburt (CG Inas mace Wyionce bonds Yoon AT)
x shun Hee lent ot DuA segnenkl ty | miblina temperaline
iment ot BBases =Code = amiro acid
>t tronsciped into BNA (mRUA, ERNA, CRNA) ;
osephypeal J funcional un oP heradiy » Hoe pon of gone along a heomanonte Iau ol Wes gene
Sy Bomeqpaus ak asinsirachions 60 walee maleabes (proteins)
Leman genes cl code Beptlans « Homa” Groves in geal envoces awchion
Se spac sequnes,
we +22 prices of daramosoneg in coll much
* Human genome: {PaloMcone Duh eae nla st,
— inclades— 5 pan-cobag DA gues ens fa PAA a plein 27 of penne
haploid picid a eect sort sane oP conbain_gancs oc BMA 04 fib 20h
sin geem cells In bomabic calls srt gale Rn
ay a (pila —_$§$£2ea= 2 = Ab Uocnssace erase reece
wla223 chconmaee ad
spin bab te
tal He sane gucrtyse con cl
Primarystructure —> sequence of nucleotides | opiong ae
Secondarystucture—»Brighthanded helix (clockwise) seal unl oR
yey onlin Nas
DNA Tertiary structure: \ sino a aha
It is the folding of long DNA molecule to
decrease its size and allow its packing inside
the cell this is called (DNA supercoiling)
—
cheomalin > clatomonoce Pehromabl > DNA > goneOngonizah ian of eakary akic DNA techn a
x Caromakin’s Sivples! implest Porm present in non. v vidi a cubtarplic cells Gagaice)
x clrramororne i inh most condensed shake when coll undecgoing The mebaphasech cll cbivisin
Wal Kare visible under ight mierovope
+ In electron microscope, chromatin resemble
2a regularly beaded thread.
One chromesome
>I single DMA walecuLe
Abon = wa Peoleine
sedebe sage abe 3 otha
Hisdnes proteins
boxe pectin. Deharged > tide in bysine’® Angina
Unk site WA Qdoryec Weide) sa foes Provence of pepe gure
Te mye tie tne Le lineage cts)
single na DOM ans, Deepal gut ener
Tene meh fs.
Fiduca cwomabids comected eh co! ote dhicss ch inp Kal 30
o), HDI WI “Aaesion conde comecte) to spec pris Pp acct I on spate
WWI Each cheomabid, ~ Dtdawacs (Rend) Hoal: chamfered by the pcsmsee.cl vorabe
ceptibed cumlose ot speatic. seq nce Gb socscal atsbuns) Long (TTAGES,) in htmtin
oTack dotomadid formed at at oucleninmet pihine cone )
Fach nucleosomes antiste at Eccl Aaah (calle kale ster
ei repped 175 Nebbhoncled burns:
oF DAS
“Gp Comes milion)
sleet
x suprcsiling of DNA: sbebivoen onto? ndbestnne Ure nse, come
rsdn ob linear VOU hawt bo be padued Incheomadin comping hss'25) vaipiagins
nfo eruclars 10m dame Leal roger st
(pany cabot ft) °°"? 10m Worl (10am inchavabe) ctpnome
2 fours eakaot 53. 30 nun ce Leach un cenan bruciessrs) ts Sell (cqindealh!) Gat
204 Lpaclinn cobinal 8d) > sted layed stuckoe(allachal to 2 pelt cathid tn ensettes.
Each covets conbain é [20 -
Lac een of Hoe coil condsin 30 ropettes atone protineDMA Replicakion Leche
mais Hoe Syntheses of Dua oceurs dlunny & phare
Cycopy i totmemadie ct ganic abn
wBave-pasring cube evry stand ack a Kmpake for Parner nes cnpitancany Sond
4DUf Replicatin is Seomi-Comberuadine’- nul, famed) 2dausiler Dut har one cid chavd jsoe nom loomed! ComPloninbe tm
Co import Ducky) bo bransher gemehic. sabe in the cormeck seqaance.
DNA Replicabion ia
A) Separodion of He'2 DA erronde:-
in lye a elie on
1.DUA eepicabion seks ab speabic DAA sayunce called oxgin ob roplenhin saan Sohn
deamasefshe poe
Lidaa praia recogonises toe origin of eeplcabiony, separates Yee 2 stomnels ak arery email cegjon by ATP hypolys
STRis Smal sepotahivn allows, Wicase orvgwe. be hawt actesste DUA sronds » The, Sielohingy allows mort deal tobind with unwound royon
DUA cases) binding bo hate Ladar (da) his bound inadivalin dest «deal inleracts with chs bod bo sin Shand. ee
Lreratt chads (peicuss) sp ahicle encitde Ye ssa
irbeiase UoaB) renbibe pommase els sychreus of RUA primer on aun sham Ott sMerelease of the helicase loader K
actuabion of helicase (daa)
3.DwA helicase(dnals) separates tre double heli log breaking hydraqgen bonds using enecray yA? hag
4. Single stand DNA birding Proteins (S58) which loinds with cath skemnd +o 1) promand: repining,
2) probec the single arvanel frm mucleabes
Poles,
5 Preparing complex consist af nal, dal , SSB prokin , DUA huicas[dna®) + +) replicabonintiahion
Dmaintaining He separation of 2DAA sands
6. DAA Tapsisomecanes .0rt- regpors: ble boc roman
Topoisomacase. |
howe both wucdeabe Lebrond
Bn
cals ie He bolin —s 2 stan) pasted
oma \sqpse (skyand cleasing)
“Topsisomerag \\
Fronsieat ouk in one strand bebemieet at iba shronds
hs pegndairnd),——_ eh pdr nd)
TDMA gyrase =- Type ll bopaitomecaie. Aoundlin bucheria 9 plats
8. Now cach reese ssDVA ock-os Nnploke bo due te sy bta
of @ new danger DNS shrand
He Quinalones:= onli essbial dys
eq naidiie auc {eyou}
ck iaibibne, bacenal gyrase
pring, bacterial reghcabion Biensuiphon
eek comcar ogyonkss
£4 cloposcle shargek human
sora Ihy Parent strand a eT Rua Drivers
4 ewan onan mr syptvosaed log xvate (fh pages)
ne aotunpmomotcatat ping boned paghbl iP.)
‘6 AB Shank RA raleale 5-10 saat noi
BY Sytreris of 2 DUA wierand s:. ~peompmany be He DOA
4 Z ) erry 51-53 deedion
Daa Palywerase, W\ pp siyndthesis cof bas 2. nem shemuds., only in) By 3. chirection
by usar decay oeduade Araposphate (ATP, ence, 48) 2) Voc presence OF RNA primers
~DIUD palyrucase Poems areas DMM strand ino compamintany stquence bo He parent DNA actadinss bo bare pairing, cule
Grow? dadding deorpnudechde bipaphale. lm prophake dhesterbad with of ak 3'end of RUA pine
Dcemoul sb pycoPhosphahe (2 phespinate)
3) pennde emai Bor Ye ceathioaLby Hrelualyss of pyraphaphe ko bocin phoiphodt dec bord)
overt airection of replication: us
“SDNA synthesis in two diferent directions:
i
Gara Per eg emer es
‘Heat of OHA henge "near the
rr repestion forks
‘These. short. stretches of dscontinvous DNA,
termed Okazaki fragments, are
* Leading strand: te sand that is
being coped inthe direction ofthe advancing
"r caled the leading sand
repiation fork -
DE ee eee kan pry ci eee
eee aed
Oi pals po cb ahr comet)
chase tnmmalee cerlnin He added wuletdas ae
aatgcehed 04, 38 ene
= Carat ne
I te the Rat cat of the rma Frat te gap at fide dna)
ee Fare Yd Buhradels thy weil bao lege
Sp ca et eps
YY Vagyng shewud Qadghaz=}Uertiphowtalezapen mceohdes or Cys th sb Sens a
mono sinoopotionne
Notes ° = Although the leading-srand DNA polymerase can
replete Hs template ar on 28 is exposed,
+ Nucci tiposphates have thee_phorston
Sunes of the lagging strand (or
Peis eae es et eR tho esd mwa
‘Seonvibosa: The phosphor group proximal to the jour», Mavement of the replication fork:to-expose-a
eguts i cled the malaise, wheres te lS + bani length of temas plore scan Ge
mile and distal groups ae called the B-phosphate eens uneteplicated, Each time a substantial length of new
andthe yphosphate, respectively TOT Taeging-strand template is exposed, DNA
econ ae smhens 1s itated and. continues “unt it
Li - “Natuent reaches the Send of the. previous, newly
nam eer s-seint 20870" synthesized stretch of lagging -strand DNA.
Meta
© DNA Synthesis
+ The dion tamu 2 owing oncetie
Chainolengnnisincatedy the lowing reat
ieae+ | then. he hn re forthe oberon of maceodes
cZECE ito ona? tata! re energy povided by the |
sie ofthe pyrophosphate no fo porpste Bou
See ES ea
0-0-0,
5 ob ile Fs chucrnello
ithaca
+ All DNA polymerases require a primer with a
free 3'-OH. They cannot initiate a new DNA
yo! “strand de nove. How, then, are new strands
2” of DNA synthesis started? To accomplish this,
puaid! the cell takes advantage of the ability of BNA
“18 polymerases to do what DNA polymerases
AM Pr Cannot: start new RNA chains de nova.pel cphaye ae slyge ne ta lJ an?
2 Nag acs hm ia sg cet J Oui Saeed
oe mt ee
ee The antiva drug Acyow structure pictured Below) is used to wet infections
+ * caused by double-stranded DNA vite uch a herpes simple vis, Aeyinr
Ag As “OC i ‘vate level of yess
°
ras Somescenk (esa)
(Lirias cas cock express tlomersiea
a Meurons doa dice 4 ub cosick tie gore (thal expressed for ldonese) bukit ik expressed
Ln goes cell Comcer ctl shor calls > Nelamer dock shalom shy)
Duc te $e presence af en)
Tell Them AU Genes Gotta Go ."inia Meds
Co sequence at Yelomer TAG
* Telomerase is a reverse transcriptase ( uses an 7
internal RNA strand as a template for synthesis of
a complementary DNA strand).
* Its activity depends on the presence of an RNA
molecule in its structure, which __is
complementary to the TTAGGG repeat. “> Ajuccc
* Telomerase recognizes the single stranded 3°
termi
telte-toelongte the navenal sand then the
this parental strand Is used as a template for
synthesis of the telomere of the lagging strandRibonucleic Aad URNA) Leclwe #
YU nucleaticler:- DAMP 2) GMP 3)CMP_Y)UMP
inkecconned. 4 phosphediester bondls
SSyptreseed buy aprocess Hs, Transiriphin
yee of oe is contaled by aves sequence in one't" shot Dut (Lape Sond)
So Mypes ol RIVA: DRlbosimal AWA (RMA) 30/2) hmufe BUN RUD 57
@Ribosomal RNA (r RNA): | *Messenger RNA(mRNA)
+ FRNA are found in association with several
BMessenage RUA 5,
‘@Transfer RNA (tRNA)
My Pray Rvasoet
ARR ED p mtn ay
Moiectoatewesin Snifbon PONE
hme Spent ROA Cobo
spud
ang ieee
Sedo hrins hed
© jakron be €¥on syst
eniny crabtna exon TK2u3 9
aft 1 FP ero KD Cane
ES Cle yGee enpresrian Leclwe B
Sy Cena Di) andar goes braneceiphinindo mRNA thal: can teanslale He cousdad qovliistaceabion
2 Transoription (RIVA syntnesis) «He spatrens o® RWA using DUA os a template
Oo P 4 ) ties fea
Loy, encegyne Oa BWA pabgeeta ne te PVD pobymucste (RNAP)
one ot 2DAIA aWonds is bygnsitpesl <> Tensile simncl or Ubals sense)
Prbecaureits sequumce inthe same as tre neaday syatrerired DAA Heng
processed in various ways before being exported
1: 70,000 ys, 1: nition from the nucleus where it can be translated.
in teaasceiphian Lr of replication \clude capping of the 5!
end of the RNA, splicing, and polyadenylation of
The choice of which regions to transcribe is not the 3” end of the RNA. The most complicated of
random: there are specific DNA sequences that ee
ct the. ion of transcription at the start of these is splicing—the process whereby non-
each region and others at the end that terminate coding introns are removed from RNA to
transcription. generate the mature mRNA.
the_general transcription factors (GTFs).
Several ination factors are required for
efficient and. promoterspectc intiation in
eukaryotes, Nuclear RNA polymerases of eukaryotic cells:
L- RNA pol [torres 0s 585208 rem veges
2-RNA pol tse orem comir Ga oR
3+ RNA pol Ill: sal nuclear FAS (NA)
“eacondal RNA eo eer
conte mrs ee asses
+ Similar to prokaryotes, eukaryotic RNA synthesis include
three main phases:
1. Initiation : involves the binding of RNA polymerase to 9
fagion on the BNA which Iz-specific and fs known as the
bromoter rezion,
2 Elongation “after the promoter region is recognized by the
RNA polymerase, I starts to synthesize a complementary
fransenpt to the ‘template DNA. strand he. RNA
Efe ™ Grey ands selene: pyrophosphate each time
nucleotide Is sued to the growing chains ne
3: Termination : elongation of the RNA chain continues until»
termination signal is reached.
INA Polmerase I Cor Promoters Are Made Up
‘ot combinations rent Chases of
Sequence Element ind fo aval Worse inion OY Me Pol
machinery
“A cor porate © tpl stot [SD] Tw rst
fei it shea py ny sing ik pon ant
‘nner ion espe
Sie ond SEE nee
Speers q| SaTe fo tp isting ft 1 (ccs
“ng ann epost eh a
the oar by pase
3
Termination in eukaryotes: