Methods of enzyme purification
1. salt precipitation
2. Chromatographic methods
i. ion exchange (cationic or anionic )
separation based on charge; the greater the net charge, the more strong
the interaction ; elute by increasing ionic strength of buffer or altering
pH
ii. gel permeation (size exclusion) chromatography:
separation based on size; larger proteins elute first
iii. Hydrophobic interaction chromatography:
separation based on hydrophobicity of protein surface; elute by
decreasing polarity of buffer ; more hydrophobic bind more strongly and
elute last.
iv. affinity chromatography:
separation based on specific biological interaction; eg enzyme –
substrate recognition; elute with substrate
v. immunoaffinity chromatography:
separation based on specificity of antibody recognition of peptide
sequence; elute by lowering pH to 2-3 to disrupt antibody – peptide
interaction. Neutralize quickly to avoid loss of activity.
Assessment of purity
SDS polyacrylamide gel electrophoresis
enrichment
N-group analysis
Units of enzyme activity
Activity: amount of product produced per unit time (eg. ?mols /
sec)
Specific activity: amount of product produced per unit time per mg
protein
(eg. mmols / sec / mg)
Enrichment: SA of fraction / SA of starting material
Maximum possible enrichment: 100 / % of total protein
represented by protein of interest
% purity : actual enrichment / maximum possible enrichment
% recovery (yield) : total activity of fraction / total starting
activity