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LOC109837151 transcription factor E2FB-like [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109837151, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109837151
Gene description
transcription factor E2FB-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 4 NC_033797.1 (33797891..33812543, complement)

Chromosome 4 - NC_033797.1Genomic Context describing neighboring genes Neighboring gene HVA22-like protein i Neighboring gene uncharacterized LOC109837150 Neighboring gene AP-2 complex subunit sigma-like Neighboring gene calcium-dependent protein kinase 18-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033797.1 Chromosome 4 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2FB-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033797.1 Reference Aspof.V1

    Range
    33797891..33812543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020405265.1 → XP_020260854.1  transcription factor E2FB-like

    Conserved Domains (2) summary
    cd14660
    Location:93 → 196
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:18 → 82
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
Nucleotide Protein
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