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24 pages, 646 KiB  
Review
Common Non-Rheumatic Medical Conditions Mimicking Fibromyalgia: A Simple Framework for Differential Diagnosis
by Andrea D’Amuri, Salvatore Greco, Mauro Pagani, Barbara Presciuttini, Jacopo Ciaffi and Francesco Ursini
Diagnostics 2024, 14(16), 1758; https://doi.org/10.3390/diagnostics14161758 - 13 Aug 2024
Viewed by 888
Abstract
Fibromyalgia (FM) is a chronic non-inflammatory disorder mainly characterized by widespread musculoskeletal pain, fatigue, sleep disturbances, and a constellation of other symptoms. For this reason, delineating a clear distinction between pure FM and FM-like picture attributable to other common diseases can be extremely [...] Read more.
Fibromyalgia (FM) is a chronic non-inflammatory disorder mainly characterized by widespread musculoskeletal pain, fatigue, sleep disturbances, and a constellation of other symptoms. For this reason, delineating a clear distinction between pure FM and FM-like picture attributable to other common diseases can be extremely challenging. Physicians must identify the most significant confounders in individual patients and implement an appropriate diagnostic workflow, carefully choosing a minimal (but sufficient) set of tests to be used for identifying the most plausible diseases in the specific case. This article discusses prevalent non-rheumatological conditions commonly observed in the general population that can manifest with clinical features similar to primary FM. Given their frequent inclusion in the differential diagnosis of FM patients, the focus will be on elucidating the distinctive clinical characteristics of each condition. Additionally, the most cost-effective and efficient diagnostic methodologies for accurately discerning these conditions will be examined. Full article
(This article belongs to the Special Issue Rheumatic Diseases: Diagnosis and Management)
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<p>Schematic representation of the differential diagnoses of fibromyalgia.</p>
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18 pages, 1198 KiB  
Article
Transient and Persistent Technical Efficiencies in Rice Farming: A Generalized True Random-Effects Model Approach
by Phuc Trong Ho, Michael Burton, Atakelty Hailu and Chunbo Ma
Econometrics 2024, 12(3), 23; https://doi.org/10.3390/econometrics12030023 - 12 Aug 2024
Viewed by 712
Abstract
This study estimates transient and persistent technical efficiencies (TEs) using a generalized true random-effects (GTRE) model. We estimate the GTRE model using maximum likelihood and Bayesian estimation methods, then compare it to three simpler models nested within it to evaluate the robustness of [...] Read more.
This study estimates transient and persistent technical efficiencies (TEs) using a generalized true random-effects (GTRE) model. We estimate the GTRE model using maximum likelihood and Bayesian estimation methods, then compare it to three simpler models nested within it to evaluate the robustness of our estimates. We use a panel data set of 945 observations collected from 344 rice farming households in Vietnam’s Mekong River Delta. The results indicate that the GTRE model is more appropriate than the restricted models for understanding heterogeneity and inefficiency in rice production. The mean estimate of overall technical efficiency is 0.71 on average, with transient rather than persistent inefficiency being the dominant component. This suggests that rice farmers could increase output substantially and would benefit from policies that pay more attention to addressing short-term inefficiency issues. Full article
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<p>(<b>a</b>) Distributions of overall technical efficiency (TE) of all models; (<b>b</b>) Transient TE of all models; (<b>c</b>) Persistent TE of all models; and (<b>d</b>) Transient and persistent TEs of MSLE and Bayesian GTRE models.</p>
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<p>Scatterplot matrices of pairwise technical efficiency estimates for all models.</p>
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<p>Planted area, yield, and production of paddy in Vietnam, 1990–2022. Source: <a href="#B40-econometrics-12-00023" class="html-bibr">GSO</a> (<a href="#B40-econometrics-12-00023" class="html-bibr">2023b</a>).</p>
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19 pages, 6030 KiB  
Article
Spatial–Temporal Evolution and Influencing Factors of Arable Land Green and Low-Carbon Utilization in the Yangtze River Delta from the Perspective of Carbon Neutrality
by Ruifa Li and Wanglai Cui
Sustainability 2024, 16(16), 6889; https://doi.org/10.3390/su16166889 - 11 Aug 2024
Viewed by 1103
Abstract
Arable land green and low-carbon utilization (ALGLU) is an important pathway to safeguard food safety and achieve the green transformation and progress of agriculture, playing a crucial role in promoting agricultural ecological protection and economic sustainability. This study takes the Yangtze River Delta [...] Read more.
Arable land green and low-carbon utilization (ALGLU) is an important pathway to safeguard food safety and achieve the green transformation and progress of agriculture, playing a crucial role in promoting agricultural ecological protection and economic sustainability. This study takes the Yangtze River Delta region (YRD), where rapid urbanization is most typical, as the study area. On the basis of fully considering the carbon sink function of arable land, the study measures the green and low-carbon utilization level of arable land in the region using the Super-slack and based measure (Super-SBM) model, and analyzes its spatial and temporal evolution using the spatial autocorrelation model, the center of gravity, and the standard ellipsoid model, and then analyzes its impact with the help of the geographic detector and the geographically weighted regression model. We analyzed the multifactor interaction and spatial heterogeneity of the factors with the help of the geodetector and geographically weighted regression model. Results: (1) The ALGLU in the YRD has shown a fluctuating upward tendency, increasing from 0.7307 in 2012 to 0.8604 in 2022, with a growth rate of 17.75%. The phased changes correspond to national agricultural development policies and the stages of socio-economic development. (2) There are significant spatial differences in the level of ALGLU in the YRD, with high levels distributed in the southwest of Jiangsu, northern Zhejiang, and northwest Anhui, while low levels are distributed in the southwest of the YRD. Positive spatial autocorrelation exists in the level of ALGLU in the YRD. The spatial transfer trends of the gravity and standard deviation ellipses essentially align with changes in the spatial pattern. (3) The level of ALGLU in the YRD is affected by many factors, with the intensity of interaction effects far exceeding that of individual factors. When considering single-factor effects, precipitation, topography, and farmers’ income levels are important factors influencing the level of ALGLU. In scenarios involving multiple-factor interactions, agricultural policies become the primary focus of interaction effects. Furthermore, the driving effects of influencing factors exhibit spatial heterogeneity, with significant differences in the direction and extent of driving effects of each factor in different cities. This study can provide valuable insights for future ALGLU in the YRD and regional sustainable development. Full article
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<p>Evaluation indicator system of ALGLU.</p>
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<p>Study area.</p>
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<p>Temporal changes in ALGLU.</p>
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<p>Spatial distribution changes of ALGLU.</p>
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<p>Moran’s I of ALGLU.</p>
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<p>LISA agglomeration and significance of ALGLU.</p>
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<p>Centroid trajectory and standard deviation ellipse of ALGLU.</p>
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<p>Geographic detector results of factors influencing ALGLU.</p>
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<p>GD results of interaction effects on factors influencing ALGLU.</p>
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<p>GWR results of effects on factors influencing ALGLU.</p>
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18 pages, 3533 KiB  
Article
Rice Yield Forecasting Using Hybrid Quantum Deep Learning Model
by De Rosal Ignatius Moses Setiadi, Ajib Susanto, Kristiawan Nugroho, Ahmad Rofiqul Muslikh, Arnold Adimabua Ojugo and Hong-Seng Gan
Computers 2024, 13(8), 191; https://doi.org/10.3390/computers13080191 - 7 Aug 2024
Viewed by 1089
Abstract
In recent advancements in agricultural technology, quantum mechanics and deep learning integration have shown promising potential to revolutionize rice yield forecasting methods. This research introduces a novel Hybrid Quantum Deep Learning model that leverages the intricate processing capabilities of quantum computing combined with [...] Read more.
In recent advancements in agricultural technology, quantum mechanics and deep learning integration have shown promising potential to revolutionize rice yield forecasting methods. This research introduces a novel Hybrid Quantum Deep Learning model that leverages the intricate processing capabilities of quantum computing combined with the robust pattern recognition prowess of deep learning algorithms such as Extreme Gradient Boosting (XGBoost) and Bidirectional Long Short-Term Memory (Bi-LSTM). Bi-LSTM networks are used for temporal feature extraction and quantum circuits for quantum feature processing. Quantum circuits leverage quantum superposition and entanglement to enhance data representation by capturing intricate feature interactions. These enriched quantum features are combined with the temporal features extracted by Bi-LSTM and fed into an XGBoost regressor. By synthesizing quantum feature processing and classical machine learning techniques, our model aims to improve prediction accuracy significantly. Based on measurements of mean square error (MSE), the coefficient of determination (R2), and mean average error (MAE), the results are 1.191621 × 10−5, 0.999929482, and 0.001392724, respectively. This value is so close to perfect that it helps make essential decisions in global agricultural planning and management. Full article
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<p>Plot the relationship of crop yield features with other features. (<b>a</b>) The relationship between crop yield and annual rainfall indicates no clear linear pattern, suggesting a complex or non-linear relationship influenced by other variables. (<b>b</b>) The relationship between crop yield and pesticide use also shows no strong linear pattern, indicating other factors may play a significant role. (<b>c</b>) The relationship between crop yield and average temperature does not show a clear linear relationship, suggesting temperature influences crop yield in a complex manner.</p>
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<p>Temporal feature analysis plot using a three-year moving average.</p>
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<p>Heatmap plot feature analysis.</p>
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<p>Framework of hybrid quantum–classical deep learning model.</p>
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<p>Quantum circuit design for feature processing.</p>
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<p>Sample dataset after one-hot encoding.</p>
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<p>Scatter plot of proposed regression model results.</p>
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27 pages, 9686 KiB  
Article
Genome-Wide Identification of Caffeic Acid O-Methyltransferase Gene Family in Medicago truncatula: MtCOMT13-Mediated Salt and Drought Tolerance Enhancement
by Kailun Cui, Yanzhen Lv, Zhao Zhang, Qingying Sun, Xingjie Yao and Huifang Yan
Agriculture 2024, 14(8), 1305; https://doi.org/10.3390/agriculture14081305 - 7 Aug 2024
Viewed by 590
Abstract
Legumes are important grains and forages, providing high-quality proteins, vitamins, and micronutrients to humans and animals. Medicago truncatula is a close relative of alfalfa (Medicago sativa). Caffeic acid O-methyltransferase (COMT), a key gene that is identified to be essential [...] Read more.
Legumes are important grains and forages, providing high-quality proteins, vitamins, and micronutrients to humans and animals. Medicago truncatula is a close relative of alfalfa (Medicago sativa). Caffeic acid O-methyltransferase (COMT), a key gene that is identified to be essential for melatonin synthesis, plays a significant role in plant growth, development, and abiotic stress responses. However, a systematic study on the COMT gene family in M. truncatula has still not been reported. In this study, 63 MtCOMT genes were identified and categorized into three groups. Gene structure and conserved motif analyses revealed the relative conservation of closely clustered MtCOMTs within each group. Duplicated events in MtCOMT members were identified, and segmental duplication was the main mean. Cis-acting element prediction revealed the involvement of MtCOMTs in growth and development and response to light, stress, and plant hormones. RNA-seq data analysis showed that 57 MtCOMTs varied under salt and drought stresses. The RT-qPCR expression patterns showed that MtCOMT9, MtCOMT13, MtCOMT22, MtCOMT24, MtCOMT43, and MtCOMT46 were related to salt and drought responses in M. truncatula. Additionally, Arabidopsis thaliana overexpressing MtCOMT13 displayed superior plant growth phenotypes and enhanced tolerance to salt and drought stresses through higher photosynthetic parameters and activities of antioxidant enzymes, which indicated that MtCOMT13 played an important role in positively regulating plant salt and drought tolerance. These findings contribute to an improved understanding of MtCOMTs’ roles in abiotic stress responses in M. truncatula, providing an important theoretical basis and genetic resource for legume species resistance breeding in the future. Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
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<p>Phylogenetic tree of COMTs from <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>, <span class="html-italic">M</span>. <span class="html-italic">sativa</span>, <span class="html-italic">G</span>. <span class="html-italic">max</span>, <span class="html-italic">A</span>. <span class="html-italic">thaliana</span>, and <span class="html-italic">O</span>. <span class="html-italic">sativa</span> constructed by the Neighbor-Joining (NJ) method using Poisson model in EMBL-EBI software with 1000 bootstrap value. The yellow, red, and blue rectangles on the outside of the circle represent groups I, II, and III, respectively. The blue stars, red squares, green triangles, pink circles, and brown squares indicate <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>, <span class="html-italic">M</span>. <span class="html-italic">sativa</span>, <span class="html-italic">G</span>. <span class="html-italic">max</span>, <span class="html-italic">A</span>. <span class="html-italic">thaliana</span>, and <span class="html-italic">O</span>. <span class="html-italic">sativa</span>, respectively.</p>
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<p>Phylogenetic relationship, exon/intron structure, and conserved motif analyses of putative COMTs in <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>. (<b>A</b>) Phylogenetic relationship of <span class="html-italic">COMT</span> genes. The phylogenetic tree was constructed using full-length sequences of 63 COMT proteins in <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>, through MEGA-X software 7.0 and the Neighbor-Joining method. (<b>B</b>) Exon/intron structure of <span class="html-italic">MtCOMT</span> genes. Exon, intron, and UTR are, respectively, represented by the green box, gray line, and yellow box. Exon or intron size can be calculated using the scale at the bottom. (<b>C</b>) Distribution of the six most conserved motifs in COMT proteins represented by different colors. (<b>D</b>) Sequence of the six most conserved motifs in MtCOMTs.</p>
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<p>Collinearity analysis of the COMT gene family in <span class="html-italic">M. truncatula</span>. (<b>A</b>) Collinearity analysis of COMT genes in <span class="html-italic">M. truncatula</span>. Eight colored rectangular boxes located at the outer edge of the circle represent the eight chromosomes of <span class="html-italic">M. truncatula</span>. In the middle of the collinear circle, gray lines represent the collinearity module of <span class="html-italic">M. truncatula</span> genome, and red lines represent the collinearity relationship of some COMT genes. (<b>B</b>) Collinearity analysis of COMT genes between <span class="html-italic">M. truncatula</span> and <span class="html-italic">M. sativa</span>, <span class="html-italic">G. max</span>, <span class="html-italic">A. thaliana</span>, and <span class="html-italic">O. sativa</span>. Gray lines represent collinear blocks in genomes of <span class="html-italic">M. truncatula</span> and the other four representative plants, and red lines show collinear COMT gene pairs.</p>
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<p><span class="html-italic">Cis</span>-acting element prediction in <span class="html-italic">MtCOMTs</span> promoters. The <span class="html-italic">cis</span>-acting element number in <span class="html-italic">COMT</span> genes is shown, and the colors in the heatmap indicate the frequency of the elements.</p>
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<p>Tissue expression profiles of <span class="html-italic">MtCOMTs</span> in <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>. <span class="html-italic">MtCOMT</span> expression levels in different tissues are retrieved from the RNAseq-based Gene Expression Atlas dataset of <span class="html-italic">M</span>. <span class="html-italic">truncatula</span> (MtExpress V3). A clustering heatmap, based on the log2 scale, is drawn through using TBtools software (version 2.008). Colors spanning from blue to red represent the increased gene expression level.</p>
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<p>Expression patterns of <span class="html-italic">MtCOMTs</span> in response to abiotic stress in <span class="html-italic">M</span>. <span class="html-italic">truncatula</span>. (<b>A</b>) Salt stress. (<b>B</b>) Drought stress. (<b>C</b>) Cold stress. Gene expression levels are retrieved from the RNAseq-based Gene Expression Atlas dataset of <span class="html-italic">M</span>. <span class="html-italic">truncatula</span> (MtExpress V3). Relative expression levels of genes were calculated. A clustering heatmap, based on the log2 scale, is drawn through using TBtools software (version 2.008). Colors spanning from blue to red represent the increased gene expression level. (<b>D</b>) Venn diagram of <span class="html-italic">MtCOMTs</span> genes expressed under the three abiotic stresses.</p>
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<p>The RT-qPCR analysis of <span class="html-italic">MtCOMT</span> expression under salt stress. Results are indicated as the ratio of <span class="html-italic">MtCOMT</span> expression to reference gene expression. Data represent means ± SE (<span class="html-italic">n</span> = 3, <span class="html-italic">p</span> ≤ 0.05, one-way ANOVA). Different lowercase letters among treatment durations represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level.</p>
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<p>The RT-qPCR analysis of <span class="html-italic">MtCOMT</span> expression under drought stress. Results are indicated as the ratio of <span class="html-italic">MtCOMT</span> expression to reference gene expression. Data represent means ± SE (<span class="html-italic">n</span> = 3, <span class="html-italic">p</span> ≤ 0.05, one-way ANOVA). Different lowercase letters among treatment durations represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level.</p>
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<p>Seed germination differences between wild-type (WT) and <span class="html-italic">MtCOMT13</span>-overexpressed (OE) <span class="html-italic">Arabidopsis</span> lines under salt and drought stress. (<b>A</b>) The relative expression level of <span class="html-italic">MtCOMT13</span> in WT and overexpressed <span class="html-italic">Arabidopsis</span>. Different lowercase letters represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level. (<b>B</b>) Germination phenotypes of WT and <span class="html-italic">MtCOMT13</span>-OE seeds cultivated under control, 150 mM NaCl, or 300 mM mannitol stress for 7 days. Scale bar = 1 cm. (<b>C</b>–<b>E</b>) Germination percentage of WT and <span class="html-italic">MtCOMT13</span>-OE seeds under control, 150 mM NaCl, or 300 mM mannitol stress. (<b>F</b>–<b>H</b>) Seedling percentage of WT and <span class="html-italic">MtCOMT13</span>-OE <span class="html-italic">Arabidopsis</span> under control, 150 mM NaCl, or 300 mM mannitol stress. Values are expressed as means ± SE (<span class="html-italic">n</span> = 3).</p>
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<p>Salt and drought responses of wild-type (WT) and <span class="html-italic">MtCOMT13</span>-overexpressed (OE) <span class="html-italic">Arabidopsis</span> seedlings. (<b>A</b>) Phenotypes of WT and <span class="html-italic">MtCOMT13</span>-OE seedlings under control condition, 150 mM NaCl, or 300 mM mannitol. Scale bar = 1 cm. (<b>B</b>) Lateral root number, (<b>C</b>) root length, and (<b>D</b>) fresh weight of WT and <span class="html-italic">MtCOMT13</span>-OE seedlings under salt and drought stress. Values are expressed as means ± SE (<span class="html-italic">n</span> = 3). Different lowercase letters among WT and <span class="html-italic">MtCOMT13</span>-OE lines represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level.</p>
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<p>Salt and drought tolerance analyses of wild-type (WT) and <span class="html-italic">MtCOMT13</span>-overexpressed (OE) <span class="html-italic">Arabidopsis</span> plants. (<b>A</b>) Plant phenotypes after 300 mM NaCl stress or natural drought stress for 21 days. (<b>B</b>) Chlorophyll content, (<b>C</b>) stomatal conductance, (<b>D</b>) intercellular CO<sub>2</sub> concentration, (<b>E</b>) transpiration rate, and (<b>F</b>) net photosynthetic rate of WT and <span class="html-italic">MtCOMT13</span>-OE plants under salt and drought stress. Values are expressed as means ± SE (<span class="html-italic">n</span> = 3). Different lowercase letters among WT and <span class="html-italic">MtCOMT13</span>-OE lines represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level.</p>
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<p>Physiological and biochemical analyses of wild-type (WT) and <span class="html-italic">MtCOMT13</span>-overexpressed (OE) <span class="html-italic">Arabidopsis</span> plants after 300 mM NaCl and natural drought stress for 21 days. (<b>A</b>) Soluble protein content. (<b>B</b>) Soluble sugar content. (<b>C</b>) Proline content. (<b>D</b>) MDA content. (<b>E</b>) SOD activity. (<b>F</b>) POD activity. (<b>G</b>) CAT activity. Values are expressed as means ± SE (<span class="html-italic">n</span> = 3). Different lowercase letters among WT and <span class="html-italic">MtCOMT13</span>-OE lines represent significant differences at <span class="html-italic">p</span> &lt; 0.05 level.</p>
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<p>Subcellular localization of MtCOMT13 in tobacco protoplasts. Confocal laser scanning microscope images of tobacco protoplasts expressing MtCOMT13 fused to GFP proteins. Scale bar = 10 µm.</p>
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14 pages, 5745 KiB  
Article
Expression of Foxtail Millet bZIP Transcription Factor SibZIP67 Enhances Drought Tolerance in Arabidopsis
by Xinfeng Jia, Hanchi Gao, Lingxin Zhang, Wei Tang, Guo Wei, Juan Sun and Wangdan Xiong
Biomolecules 2024, 14(8), 958; https://doi.org/10.3390/biom14080958 - 7 Aug 2024
Viewed by 577
Abstract
Foxtail millet is a drought-tolerant cereal and forage crop. The basic leucine zipper (bZIP) gene family plays important roles in regulating plant development and responding to stresses. However, the roles of bZIP genes in foxtail millet remain largely uninvestigated. In this [...] Read more.
Foxtail millet is a drought-tolerant cereal and forage crop. The basic leucine zipper (bZIP) gene family plays important roles in regulating plant development and responding to stresses. However, the roles of bZIP genes in foxtail millet remain largely uninvestigated. In this study, 92 members of the bZIP transcription factors were identified in foxtail millet and clustered into ten clades. The expression levels of four SibZIP genes (SibZIP11, SibZIP12, SibZIP41, and SibZIP67) were significantly induced after PEG treatment, and SibZIP67 was chosen for further analysis. The studies showed that ectopic overexpression of SibZIP67 in Arabidopsis enhanced the plant drought tolerance. Detached leaves of SibZIP67 overexpressing plants had lower leaf water loss rates than those of wild-type plants. SibZIP67 overexpressing plants improved survival rates under drought conditions compared to wild-type plants. Additionally, overexpressing SibZIP67 in plants displayed reduced malondialdehyde (MDA) levels and enhanced activities of antioxidant enzymes, including catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD) under drought stress. Furthermore, the drought-related genes, such as AtRD29A, AtRD22, AtNCED3, AtABF3, AtABI1, and AtABI5, were found to be regulated in SibZIP67 transgenic plants than in wild-type Arabidopsis under drought conditions. These data suggested that SibZIP67 conferred drought tolerance in transgenic Arabidopsis by regulating antioxidant enzyme activities and the expression of stress-related genes. The study reveals that SibZIP67 plays a beneficial role in drought response in plants, offering a valuable genetic resource for agricultural improvement in arid environments. Full article
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<p>Phylogenetic analysis of bZIP proteins in foxtail millet and rice.</p>
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<p>Differential expression genes in foxtail millet leave after PEG treatment. (<b>A</b>) Volcanic maps after PEG treatment. Green and red dots indicate down-regulated DEGs for log<sub>2</sub>(FC) ≤ −1 and up-regulated DEGs for log<sub>2</sub>(FC) ≥ 1, respectively. Black dots indicate no significant differences between transcriptomes. (<b>B</b>) Venn diagrams of co-regulated genes at 2 h and 6 h after PEG treatment. (<b>C</b>) Regulated <span class="html-italic">SibZIP</span> genes after drought treatment at both 2 h and 6 h. D refers to the expression level under PEG treatment, and CK refers to the control. The experiment contains three biological replicates.</p>
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<p>Differential expression genes in foxtail millet leave after PEG treatment. (<b>A</b>) Volcanic maps after PEG treatment. Green and red dots indicate down-regulated DEGs for log<sub>2</sub>(FC) ≤ −1 and up-regulated DEGs for log<sub>2</sub>(FC) ≥ 1, respectively. Black dots indicate no significant differences between transcriptomes. (<b>B</b>) Venn diagrams of co-regulated genes at 2 h and 6 h after PEG treatment. (<b>C</b>) Regulated <span class="html-italic">SibZIP</span> genes after drought treatment at both 2 h and 6 h. D refers to the expression level under PEG treatment, and CK refers to the control. The experiment contains three biological replicates.</p>
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<p>The conserved domain of SibZIP67 and expression pattern of <span class="html-italic">SibZIP67</span> in foxtail millet. (<b>A</b>) The conserved domain of SibZIP67 and its closely related sequences in rice, <span class="html-italic">Arabidopsis</span>, green foxtail, and sorghum. (<b>B</b>) Expression levels of <span class="html-italic">SibZIP67</span> in root, leaf, and stem under unstressed conditions. (<b>C</b>) The expression level of <span class="html-italic">SibZIP67</span> in roots after PEG treatment. (<b>D</b>) The expression level of <span class="html-italic">SibZIP67</span> in shoots after PEG treatment. The baseline expression of the <span class="html-italic">SibZIP67</span> gene at each time point in the control group was set to a value of 1. The relative expression levels of the <span class="html-italic">SibZIP67</span> gene in response to PEG treatment were ascertained by comparing the fold changes in gene expression between the treated samples and their corresponding controls at each respective time point. Lowercase letters indicate a significant difference at <span class="html-italic">p</span> &lt; 0.05. Each experiment contains three biological replicates, and each with two technical replicates (means of n = 6 ± SD).</p>
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<p>The germination rates of <span class="html-italic">SibZIP67</span> overexpressing lines and WT under mannitol treatment. (<b>A</b>) Comparison of germination of <span class="html-italic">SibZIP67</span> overexpressing lines and WT on 1/2 MS medium containing 0, 200, and 300 mM mannitol for 3 days. (<b>B</b>) Seed germination rates of <span class="html-italic">SibZIP67</span> overexpressing lines and WT on 1/2 MS medium containing 0, 200, and 300 mM mannitol. Data represent mean values ± SD from four biological replicates (n = 72). ** indicates <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>Phenotype and root length of <span class="html-italic">SibZIP67</span> overexpressing lines on a vertical plate under mannitol treatment. (<b>A</b>) Phenotypes of <span class="html-italic">SibZIP67</span> overexpressing lines and WT on 1/2 MS medium containing 0, 200, and 300 mM mannitol for 7 days. (<b>B</b>) Root length between transgenic and WT seedlings on 1/2 MS medium containing 0, 200, and 300 mM mannitol for 7 days. All data were analyzed for five biological replicates (n = 30). Lowercase letters indicate a significant difference at <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Drought tolerance of <span class="html-italic">SibZIP67</span> overexpressing lines. (<b>A</b>) Phenotype of <span class="html-italic">SibZIP67</span> overexpressing lines and WT after drought treatment. (<b>B</b>) Water loss rate of detached leaves. (<b>C</b>) Survival rate statistics after withholding water for 12 days and re-watering for 3 days. (<b>D</b>) MDA content in the leaves of transgenic and WT plants under drought stress. (<b>E</b>–<b>G</b>) Activities of POD (<b>E</b>), CAT (<b>F</b>), and SOD (<b>G</b>) activities of transgenic and WT plants under drought stress. Data in (<b>B</b>,<b>C</b>): means of n = 30 ± SD from three independent experiments. Data in (<b>D</b>–<b>G</b>): means of n = 6 ± SD from three independent experiments. * and ** indicate <span class="html-italic">p</span> &lt; 0.01 and <span class="html-italic">p</span> &lt; 0.01, respectively.</p>
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<p>Drought tolerance of <span class="html-italic">SibZIP67</span> overexpressing lines. (<b>A</b>) Phenotype of <span class="html-italic">SibZIP67</span> overexpressing lines and WT after drought treatment. (<b>B</b>) Water loss rate of detached leaves. (<b>C</b>) Survival rate statistics after withholding water for 12 days and re-watering for 3 days. (<b>D</b>) MDA content in the leaves of transgenic and WT plants under drought stress. (<b>E</b>–<b>G</b>) Activities of POD (<b>E</b>), CAT (<b>F</b>), and SOD (<b>G</b>) activities of transgenic and WT plants under drought stress. Data in (<b>B</b>,<b>C</b>): means of n = 30 ± SD from three independent experiments. Data in (<b>D</b>–<b>G</b>): means of n = 6 ± SD from three independent experiments. * and ** indicate <span class="html-italic">p</span> &lt; 0.01 and <span class="html-italic">p</span> &lt; 0.01, respectively.</p>
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<p>Transcript levels of stress-related marker genes in <span class="html-italic">SibZIP67</span> overexpressing lines and WT plant. Leaves were collected when the soil moisture content was 30%. Each experiment contains three biological replicates, and each with two technical replicates (means of n = 6 ± SD). ** indicates <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>Transcript levels of stress-related marker genes in <span class="html-italic">SibZIP67</span> overexpressing lines and WT plant. Leaves were collected when the soil moisture content was 30%. Each experiment contains three biological replicates, and each with two technical replicates (means of n = 6 ± SD). ** indicates <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>Proposed model of the positive roles of <span class="html-italic">SibZIP67</span> in drought tolerance.</p>
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18 pages, 3470 KiB  
Article
Soft Robots: Computational Design, Fabrication, and Position Control of a Novel 3-DOF Soft Robot
by Martin Garcia, Andrea-Contreras Esquen, Mark Sabbagh, Devin Grace, Ethan Schneider, Turaj Ashuri, Razvan Cristian Voicu, Ayse Tekes and Amir Ali Amiri Moghadam
Machines 2024, 12(8), 539; https://doi.org/10.3390/machines12080539 - 7 Aug 2024
Viewed by 685
Abstract
This paper presents the computational design, fabrication, and control of a novel 3-degrees-of-freedom (DOF) soft parallel robot. The design is inspired by a delta robot structure. It is engineered to overcome the limitations of traditional soft serial robot arms, which are typically low [...] Read more.
This paper presents the computational design, fabrication, and control of a novel 3-degrees-of-freedom (DOF) soft parallel robot. The design is inspired by a delta robot structure. It is engineered to overcome the limitations of traditional soft serial robot arms, which are typically low in structural stiffness and blocking force. Soft robotic systems are becoming increasingly popular due to their inherent compliance match to that of human body, making them an efficient solution for applications requiring direct contact with humans. The proposed soft robot consists of three soft closed-loop kinematic chains, each of which includes a soft actuator and a compliant four-bar arm. The complex nonlinear dynamics of the soft robot are numerically modeled, and the model is validated experimentally using a 6-DOF electromagnetic position sensor. This research contributes to the growing body of literature in the field of soft robotics, providing insights into the computational design, fabrication, and control of soft parallel robots for use in a variety of complex applications. Full article
(This article belongs to the Section Robotics, Mechatronics and Intelligent Machines)
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<p>Design of rigid and soft delta robots. (RJ: revolute joint).</p>
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<p>Comparison of (<b>a</b>) bending movement of rigid and soft links and (<b>b</b>) lateral movement of rigid and compliant upper links.</p>
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<p>CAD model and the prototype of the proposed soft delta robot.</p>
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<p>Experimental setup to prove the concept and validate the model.</p>
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<p>Working principle of tendon-driven actuators.</p>
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<p>Frame assignment for the soft delta robot.</p>
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<p>Workspace of the soft robot.</p>
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<p>Kinematic model of the robot. (<b>a</b>) Horizontal trajectory; (<b>b</b>) joint angles.</p>
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<p>Kinematic model of the robot. (<b>a</b>) Vertical trajectory; (<b>b</b>) joint angles.</p>
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<p>Simscape model of (<b>a</b>) soft link, (<b>b</b>) compliant four-bar, and (<b>c</b>) single SL-CFB.</p>
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<p>MATLAB Simscape model of the soft delta robot.</p>
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<p>Validation of the Simscape model through experimental data.</p>
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<p>Comparison of Simscape and experimental system response for circular motion (planar trajectory).</p>
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<p>Comparison of Simscape and experimental system response for helical trajectory (spatial motion).</p>
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<p>Neural network structure.</p>
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<p>Closed-loop control using PID and NN/KNN as kinematic model.</p>
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<p>Open- and closed-loop responses. (<b>a</b>) Analytical model, open loop; (<b>b</b>) KNN regression, open loop; (<b>c</b>) neural network, open loop; (<b>d</b>) KNN regression, closed loop; (<b>e</b>) neural network, closed loop.</p>
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12 pages, 4246 KiB  
Article
Comprehensive Analysis of SARS-CoV-2 Dynamics in Bangladesh: Infection Trends and Variants (2020–2023)
by Mst. Noorjahan Begum, Selim Reza Tony, Mohammad Jubair, Md. Shaheen Alam, Yeasir Karim, Mohammad Hridoy Patwary, Sezanur Rahman, Mohammad Tanbir Habib, Anisuddin Ahmed, Mohammad Enayet Hossain, Mohammed Ziaur Rahman, Manjur Hossain Khan, Tahmina Shirin, Firdausi Qadri and Mustafizur Rahman
Viruses 2024, 16(8), 1263; https://doi.org/10.3390/v16081263 - 7 Aug 2024
Viewed by 943
Abstract
The first case of COVID-19 was detected in Bangladesh on 8 March 2020. Since then, the Government of Bangladesh (GoB) has implemented various measures to limit the transmission of COVID-19, including widespread testing facilities across the nation through a laboratory network for COVID-19 [...] Read more.
The first case of COVID-19 was detected in Bangladesh on 8 March 2020. Since then, the Government of Bangladesh (GoB) has implemented various measures to limit the transmission of COVID-19, including widespread testing facilities across the nation through a laboratory network for COVID-19 molecular testing. This study aimed to analyze the dynamics of SARS-CoV-2 in Bangladesh by conducting COVID-19 testing and genomic surveillance of the virus variants throughout the pandemic. Nasopharyngeal swabs were collected from authorized GoB collection centers between April 2020 and June 2023. The viral RNA was extracted and subjected to real-time PCR analysis in icddr,b’s Virology laboratory. A subset of positive samples underwent whole-genome sequencing to track the evolutionary footprint of SARS-CoV-2 variants. We tested 149,270 suspected COVID-19 cases from Dhaka (n = 81,782) and other districts (n = 67,488). Of these, 63% were male. The highest positivity rate, 27%, was found in the >60 years age group, followed by 26%, 51–60 years, 25% in 41–50 years, and the lowest, 9% in under five children. Notably, the sequencing of 2742 SARS-CoV-2 genomes displayed a pattern of globally circulating variants, Alpha, Beta, Delta, and Omicron, successively replacing each other over time and causing peaks of COVID-19 infection. Regarding the risk of SARS-CoV-2 infection, it was observed that the positivity rate increased with age compared to the under-5 age group in 2020 and 2021. However, these trends did not remain consistent in 2022, where older age groups, particularly those over 60, had a lower positivity rate compared to other age groups due to vaccination. The study findings generated data on the real-time circulation of different SARS-CoV-2 variants and the upsurge of COVID-19 cases in Bangladesh, which impacted identifying hotspots and restricting the virus from further transmission. Even though there is currently a low circulation of SARS-CoV-2 in Bangladesh, similar approaches of genomic surveillance remain essential for monitoring the emergence of new SARS-CoV-2 variants or other potential pathogens that could lead to future pandemics. Full article
(This article belongs to the Section Coronaviruses)
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<p>Map of Bangladesh showing the sample collection sites.</p>
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<p>Percentages of positive cases in age and sex groups between locations.</p>
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<p>(<b>A</b>) Monthly distribution of COVID-19 cases in Bangladesh: April 2020–June 2023 (Bar diagram) and SARS-CoV-2 variants: December 2020–June 2023 (Closed line), Seasonal pattern (line graph). (<b>B</b>) Seasonal distribution of SARS-CoV-2 variants over the years (2020–2023). Other Include Nigeria (B.1.525), VOC (B.1.1.7 + E484K), and VOI-5 (N394K + E484K + N501Y).</p>
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10 pages, 287 KiB  
Article
Association of CETP Gene Polymorphisms and Haplotypes with Acute Heart Rate Response to Exercise
by Habib Al Ashkar, Nóra Kovács, Ilona Veres-Balajti, Róza Ádány and Péter Pikó
Int. J. Mol. Sci. 2024, 25(16), 8587; https://doi.org/10.3390/ijms25168587 - 6 Aug 2024
Viewed by 564
Abstract
Polymorphisms in the cholesteryl ester transfer protein (CETP) gene are known to be strongly associated with increased cardiovascular risk, primarily through their effects on the lipid profile and consequently on atherosclerotic risk. The acute heart rate response (AHRR) to physical activity [...] Read more.
Polymorphisms in the cholesteryl ester transfer protein (CETP) gene are known to be strongly associated with increased cardiovascular risk, primarily through their effects on the lipid profile and consequently on atherosclerotic risk. The acute heart rate response (AHRR) to physical activity is closely related to individual cardiovascular health. This study aimed to investigate the effect of CETP gene polymorphisms on AHRR. Our analysis examines the association of five single nucleotide polymorphisms (SNPs; rs1532624, rs5882, rs708272, rs7499892, and rs9989419) and their haplotypes (H) in the CETP gene with AHRR in 607 people from the Hungarian population. Individual AHRR in the present study was assessed using the YMCA 3-min step test and was estimated as the difference between resting and post-exercise heart rate, i.e., delta heart rate (ΔHR). To exclude the direct confounding effect of the CETP gene on the lipid profile, adjustments for TG and HDL-C levels, next to conventional risk factors, were applied in the statistical analyses. Among the examined five SNPs, two showed a significant association with lower ΔHR (rs1532624—Cdominant: B = −8.41, p < 0.001; rs708272—Gdominant: B = −8.33, p < 0.001) and reduced the risk of adverse AHRR (rs1532624—Cdominant: OR = 0.44, p = 0.004; rs708272—Gdominant: OR = 0.43, p = 0.003). Among the ten haplotypes, two showed significant association with lower ΔHR (H3—CAGCA: B = −6.81, p = 0.003; H9—CGGCG: B = −14.64, p = 0.015) and lower risk of adverse AHRR (H3—CAGCA: OR = 0.58, p = 0.040; H9—CGGCG: OR = 0.05, p = 0.009) compared to the reference haplotype (H1—AGACG). Our study is the first to report a significant association between CETP gene polymorphisms and AHRR. It also confirms that the association of the CETP gene with cardiovascular risk is mediated by changes in heart rate in response to physical activity, in addition to its effect on lipid profile. Full article
(This article belongs to the Collection Feature Papers in Molecular Genetics and Genomics)
10 pages, 6129 KiB  
Article
Bone Imaging of the Knee Using Short-Interval Delta Ultrashort Echo Time and Field Echo Imaging
by Won C. Bae, Vadim Malis, Yuichi Yamashita, Anya Mesa, Diana Vucevic and Mitsue Miyazaki
J. Clin. Med. 2024, 13(16), 4595; https://doi.org/10.3390/jcm13164595 - 6 Aug 2024
Viewed by 590
Abstract
Background: Computed tomography (CT) is the preferred imaging modality for bone evaluation of the knee, while MRI of the bone is actively being developed. We present three techniques using short-interval delta ultrashort echo time (δUTE), field echo (FE), and FE with high resolution–deep [...] Read more.
Background: Computed tomography (CT) is the preferred imaging modality for bone evaluation of the knee, while MRI of the bone is actively being developed. We present three techniques using short-interval delta ultrashort echo time (δUTE), field echo (FE), and FE with high resolution–deep learning reconstruction (HR–DLR) for direct bone MRI. Methods: Knees of healthy volunteers (n = 5, 3 females, 38 ± 17.2 years old) were imaged. CT-like images were generated by averaging images from multiple echoes and inverting. The bone signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) were determined. Results: The δUTE depicted a cortical bone with high signal intensity but could not resolve trabeculae. In contrast, both the FE and FE HR–DLR images depicted cortical and trabecular bone with high signal. Quantitatively, while δUTE had a good bone SNR of ~100 and CNR of ~40 for the cortical bone, the SNR for the FE HR–DLR was significantly higher (p < 0.05), at over 400, and CNR at over 200. Conclusions: For 3D rendering of the bone surfaces, the δUTE provided better image contrast and separation of bone from ligaments and tendons than the FE sequences. While there still is no MRI technique that provides a perfect CT-like contrast, continued advancement of MRI techniques may provide benefits for specific use cases. Full article
(This article belongs to the Section Nuclear Medicine & Radiology)
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<p>Source MRI images of (<b>A</b>) proton density (PD) fast spin echo, (<b>B</b>,<b>C</b>) delta ultrashort echo time (δUTE) at varying echo times (TE), (<b>D</b>,<b>E</b>) field echo (FE) at varying TE, and (<b>F</b>) FE with deep learning reconstruction (DLR).</p>
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<p>Image processing procedure. Source images from varying TEs (<b>A</b>–<b>C</b>) were first averaged (<b>D</b>) and then inverted (<b>E</b>) to create the final processed image with CT-like contrast for bone.</p>
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<p>Representative processed images with CT-like contrast, created from (<b>A</b>) δUTE, (<b>B</b>) FE, and (<b>C</b>) FE HR–DLR source images. Images below show magnified sections of (<b>i</b>) cortical bone and (<b>ii</b>) tibiofemoral contact region.</p>
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<p>Regions of interest including cortical bone, muscle, cartilage, and air, analyzed to determine SNR and CNR.</p>
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<p>Three-dimensional bone renders created from (<b>A</b>) δUTE and (<b>B</b>) FE DLR data shows marked differences in appearance and the types of tissues being rendered.</p>
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16 pages, 3793 KiB  
Article
Rapid In Situ Near-Infrared Assessment of Tetrahydrocannabinolic Acid in Cannabis Inflorescences before Harvest Using Machine Learning
by Jonathan Tran, Simone Vassiliadis, Aaron C. Elkins, Noel O. O. Cogan and Simone J. Rochfort
Sensors 2024, 24(16), 5081; https://doi.org/10.3390/s24165081 - 6 Aug 2024
Viewed by 712
Abstract
Cannabis is cultivated for therapeutic and recreational purposes where delta-9 tetrahydrocannabinol (THC) is a main target for its therapeutic effects. As the global cannabis industry and research into cannabinoids expands, more efficient and cost-effective analysis methods for determining cannabinoid concentrations will be beneficial [...] Read more.
Cannabis is cultivated for therapeutic and recreational purposes where delta-9 tetrahydrocannabinol (THC) is a main target for its therapeutic effects. As the global cannabis industry and research into cannabinoids expands, more efficient and cost-effective analysis methods for determining cannabinoid concentrations will be beneficial to increase efficiencies and maximize productivity. The utilization of machine learning tools to develop near-infrared (NIR) spectroscopy-based prediction models, which have been validated from accurate and sensitive chemical analysis, such as gas chromatography (GC) or liquid chromatography mass spectroscopy (LCMS), is essential. Previous research on cannabinoid prediction models targeted decarboxylated cannabinoids, such as THC, rather than the naturally occurring precursor, tetrahydrocannabinolic acid (THCA), and utilize finely ground cannabis inflorescence. The current study focuses on building prediction models for THCA concentrations in whole cannabis inflorescences prior to harvest, by employing non-destructive screening techniques so cultivators may rapidly characterize high-performing cultivars for chemotype in real time, thus facilitating targeted optimization of crossbreeding efforts. Using NIR spectroscopy and LCMS to create prediction models we can differentiate between high-THCA and even ratio classes with 100% prediction accuracy. We have also developed prediction models for THCA concentration with a R2 = 0.78 with a prediction error average of 13%. This study demonstrates the viability of a portable handheld NIR device to predict THCA concentrations on whole cannabis samples before harvest, allowing the evaluation of cannabinoid profiles to be made earlier, therefore increasing high-throughput and rapid capabilities. Full article
(This article belongs to the Section Smart Agriculture)
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<p>The raw near-infrared spectral data of the cannabis dataset (n = 264) from the 950 nm to 1650 nm range. Each color represents a unique scanned sample.</p>
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<p>The pre-processed (detrend, standard normal variate, 2nd derivative and mean center) near-infrared spectral data of the cannabis dataset (n = 264) from the 950 nm to 1650 nm range. Each color represents a unique scanned sample.</p>
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<p>Scores of two principal components of the entire cannabis sample set (averaged data, n = 264). High THCA = green squares (n = 231), even ratio = red diamonds (n = 33).</p>
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<p>The PLS-DA score plot of two latent variables (LV 1 and LV 2) from the validation dataset (n = 66). Two clusters across LV2 were assigned as high-THCA = green squares (n = 61) and even ratio = red diamonds (n = 5).</p>
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<p>The PLS-DA classification of high-THCA = green squares (n = 61) and even ratio red diamonds (n = 5) classes of the cannabis validation dataset (n = 66).</p>
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<p>The VIP scores of the PLS-DA model across the near-infrared spectrum from 950 to 1650 nm.</p>
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<p>Plot of measured values versus the predicted values of THCA of the validation dataset (n = 66) using the PLS-R tool. Green line: line of best fit from reference data, red line: line of best fit from predicted data. Scatter correction and derivative settings: (<b>a</b>) DT, SNV and MC (2, 2, 5); (<b>b</b>) DT, SNV and MC (2, 2, 7); (<b>c</b>) DT, SNV and MC (2, 2, 3). Preprocessing parameters. DT: detrend; SNV: standard normal variate; MC: mean centering.</p>
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<p>Plot of measured values versus the predicted values of THCA of the validation dataset (n = 66) using the SVM-R tool. Green line: line of best fit from reference data, red line: line of best fit from predicted data. Scatter correction and derivative settings: (<b>a</b>) DT, SNV and MC (2, 2, 5); (<b>b</b>) DT, SNV and MC (2, 2, 7); (<b>c</b>) DT, SNV and MC (2, 2, 3). Preprocessing parameters. DT: detrend; SNV: standard normal variate; MC: mean centering.</p>
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<p>Plot of measured values versus the predicted values of THCA of the validation dataset (n = 66) using the XGB-R tool. Green line: line of best fit from reference data, red line: line of best fit from predicted data. Scatter correction and derivative settings: (<b>a</b>) DT, SNV and MC (2, 2, 5); (<b>b</b>) DT, SNV and MC (2, 2, 3); (<b>c</b>) DT and MC (2, 2, 5). Preprocessing parameters. DT: detrend; SNV: standard normal variate; MC: mean centering.</p>
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10 pages, 5201 KiB  
Article
Water Effect on the Electronic Properties and Lithium-Ion Conduction in a Defect-Engineered LiFePO4 Electrode
by Guoqing Wang, Pengfei Xu, Halefom G. Desta, Bayu Admasu Beshiwork, Baihai Li, Workneh Getachew Adam and Bin Lin
Batteries 2024, 10(8), 281; https://doi.org/10.3390/batteries10080281 - 6 Aug 2024
Viewed by 811
Abstract
Defect-engineering accelerates the conduction of lithium ions in the cathode materials of lithium-ion batteries. However, the effects of defect-engineering on ion conduction and its mechanisms in humid environments remain unclear in the academic discourse. Here, we report on the effect of vacancy defects [...] Read more.
Defect-engineering accelerates the conduction of lithium ions in the cathode materials of lithium-ion batteries. However, the effects of defect-engineering on ion conduction and its mechanisms in humid environments remain unclear in the academic discourse. Here, we report on the effect of vacancy defects on the electronic properties of and Li-ion diffusion in a LiFePO4 material in humid environments. The research findings indicate that vacancy defects reduce the lattice constant and unit cell volume of LiFePO4. Additionally, the water molecules occupy the Li-ion vacancies, leading to an increase in the lattice constant of LiFePO4. The computational results of the electronic properties show that the introduction of water molecules induces a transition in LiFePO4 from a semiconductor to a metallic behavior, with a transfer of 0.38 e of charge from the water molecules to LiFePO4. Additionally, the migration barrier for Li ions in the H2O + LiFePO4 system is found to be 0.50 eV, representing an 11.1% increase compared to the pristine LiFePO4 migration barrier. Our findings suggest that water molecules impede the migration of Li ions and provide important insights into the effect of defect-engineering on electronic properties and ion conduction under humid conditions. Full article
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Graphical abstract

Graphical abstract
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<p>The structure of (<b>a</b>) pristine LiFePO<sub>4</sub> and (<b>b</b>) H<sub>2</sub>O + LiFePO<sub>4</sub>. White, red, green, purple, and brown balls represent H, O, Li, P, and Fe elements, respectively.</p>
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<p>Total DOS of LiFePO<sub>4</sub> (gray shadow) and H<sub>2</sub>O + LiFePO<sub>4</sub> (red curve).</p>
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<p>Electronic band structures of (<b>a</b>) LiFePO<sub>4</sub> and (<b>b</b>) H<sub>2</sub>O + LiFePO<sub>4</sub>. The blue and red lines represent spin-up and spin-down states, respectively. The Fermi energy was set to zero.</p>
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<p>The charge density difference for H<sub>2</sub>O + LiFePO<sub>4</sub>. The blue region indicates electron depletion, and the yellow region means electron accumulation. The isosurface value was 0.0075 <span class="html-italic">e</span>/Bohr<sup>3</sup>.</p>
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<p>The electron localization function map on the (010) crystal face of (<b>a</b>) pristine LiFePO<sub>4</sub> and (<b>b</b>) H<sub>2</sub>O + LiFePO<sub>4</sub>.</p>
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<p>The migration barriers of Li ions in pristine LiFePO<sub>4</sub> (black curve) and H<sub>2</sub>O + LiFePO<sub>4</sub> (red curve).</p>
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23 pages, 9785 KiB  
Article
Applying a Current Sharing Method Based on Partial Energy Processing to Multiphase LLC Resonant Converters
by Yue-Lin Lee, Han-Hsiang Chen and Kuo-Ing Hwu
Energies 2024, 17(15), 3859; https://doi.org/10.3390/en17153859 - 5 Aug 2024
Viewed by 460
Abstract
In this paper, partial energy processing is applied to the current sharing technique for multiphase LLC resonant converters. The proposed circuit consists of an LLC resonant converter and a flyback converter, where the flyback converter is only used for partial energy processing. The [...] Read more.
In this paper, partial energy processing is applied to the current sharing technique for multiphase LLC resonant converters. The proposed circuit consists of an LLC resonant converter and a flyback converter, where the flyback converter is only used for partial energy processing. The input voltage of the LLC resonant converter is fine-tuned by the flyback converter to solve the problem of a voltage gain difference between the two phases of the LLC resonant converter caused by the error of the resonant tank components, which prevents the output current from being nonequalized. Since the compensation power is much smaller than the output power, and only one phase will be during circuit operation, the impact on the overall efficiency is minimal. Due to the low dependence between the LLC resonant converter and the flyback converter, they are operated at different switching frequencies. In addition, due to the low dependence between each phase, the circuit can be expanded using odd and even phases. Full article
(This article belongs to the Special Issue Optimal Design and Application of High-Performance Power Converters)
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<p>Traditional power supply structure.</p>
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<p>The power supply structure for Google 48 V [<a href="#B4-energies-17-03859" class="html-bibr">4</a>].</p>
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<p>Current sharing strategies.</p>
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<p>Proposed single-phase LLC resonant converter with partial energy processing.</p>
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<p>Proposed two-phase LLC resonant converter with partial energy processing.</p>
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<p>Equivalent circuit of the LLC resonant converter.</p>
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<p>Equivalent circuit of the LLC resonant converter in the <span class="html-italic">s</span>-domain.</p>
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<p>Voltage gain curves of the two-phase LLC converter.</p>
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<p>Equivalent circuit of the proposed circuit.</p>
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<p>Voltage-dependent source.</p>
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<p>Voltage gain of the proposed two-phase LLC converter.</p>
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<p>Extension of the phase account for the proposed circuit.</p>
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<p>Main program flow chart.</p>
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<p>ADC sampling triggering and data calculation.</p>
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<p>The PI module.</p>
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<p>Curve of <span class="html-italic">V<sub>ctrl</sub></span> versus <span class="html-italic">CF</span> for the two flyback converters.</p>
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<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>1</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>6</sub>; (3) <span class="html-italic">v<sub>ds</sub></span><sub>1</sub>; (4) <span class="html-italic">v<sub>ds</sub></span><sub>6</sub>.</p>
Full article ">Figure 18
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>1</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>6</sub>; (3) <span class="html-italic">i<sub>Lr</sub></span><sub>1</sub>; (4) <span class="html-italic">i<sub>Lr</sub></span><sub>2</sub>.</p>
Full article ">Figure 19
<p>Measured waveforms: (1) <span class="html-italic">v<sub>Cr</sub></span><sub>1</sub>; (2) <span class="html-italic">v<sub>Cr</sub></span><sub>2</sub>; (3) <span class="html-italic">i<sub>Lr</sub></span><sub>1</sub>; (4) <span class="html-italic">i<sub>Lr</sub></span><sub>2</sub>.</p>
Full article ">Figure 20
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>1</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>2</sub>; (3) <span class="html-italic">v<sub>gs</sub></span><sub>3</sub>; (4) <span class="html-italic">v<sub>gs</sub></span><sub>4</sub>.</p>
Full article ">Figure 21
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>6</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>7</sub>; (3) <span class="html-italic">v<sub>gs</sub></span><sub>8</sub>; (4) <span class="html-italic">v<sub>gs</sub></span><sub>9</sub>.</p>
Full article ">Figure 22
<p>Measured waveforms: (1) <span class="html-italic">V<sub>o</sub></span>; (2) <span class="html-italic">I<sub>o</sub></span><sub>1</sub>; (3) <span class="html-italic">I<sub>o</sub></span><sub>2</sub>.</p>
Full article ">Figure 23
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>1</sub> and <span class="html-italic">v<sub>ds</sub></span><sub>1</sub>.</p>
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<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>2</sub> and <span class="html-italic">v<sub>ds</sub></span><sub>2</sub>.</p>
Full article ">Figure 25
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>6</sub> and <span class="html-italic">v<sub>ds</sub></span><sub>6</sub>.</p>
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<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>7</sub> and <span class="html-italic">v<sub>ds</sub></span><sub>7</sub>.</p>
Full article ">Figure 27
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>5</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>10</sub>; (3) <span class="html-italic">v<sub>ds</sub></span><sub>5</sub>; (4) <span class="html-italic">v<sub>ds</sub></span><sub>10</sub>.</p>
Full article ">Figure 28
<p>Measured waveforms: (1) <span class="html-italic">v<sub>gs</sub></span><sub>5</sub>; (2) <span class="html-italic">v<sub>gs</sub></span><sub>10</sub>; (3) <span class="html-italic">i<sub>ds</sub></span><sub>5</sub>; (4) <span class="html-italic">i<sub>ds</sub></span><sub>10</sub>.</p>
Full article ">Figure 29
<p>Measured waveforms: (1) <span class="html-italic">V<sub>ctrl</sub></span><sub>1</sub> and (2) <span class="html-italic">V<sub>ctrl</sub></span><sub>2</sub>.</p>
Full article ">Figure 30
<p>Curves of efficiency versus load power for single-phase and two-phase circuits.</p>
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<p>Curves of efficiency versus load power for two-phase circuit with and without current sharing control.</p>
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<p>Curve of output current error percentage versus load power without current sharing control.</p>
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<p>Curve of the percentage error of output current versus load power with current sharing control.</p>
Full article ">Figure 34
<p>Photo of the experimental setup.</p>
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16 pages, 2705 KiB  
Article
Phenolic Compounds Synthesized by Trichoderma longibrachiatum Native to Semi-Arid Areas Show Antifungal Activity against Phytopathogenic Fungi of Horticultural Interest
by Enis Díaz-García, Ana Isabel Valenzuela-Quintanar, Alberto Sánchez-Estrada, Daniel González-Mendoza, Martín Ernesto Tiznado-Hernández, Alma Rosa Islas-Rubio and Rosalba Troncoso-Rojas
Microbiol. Res. 2024, 15(3), 1425-1440; https://doi.org/10.3390/microbiolres15030096 - 5 Aug 2024
Viewed by 600
Abstract
Fungal diseases are a major threat to the horticultural industry and cause substantial postharvest losses. While secondary metabolites from Trichoderma sp. have been explored for their antifungal properties, limited information exists on the phenolic compounds produced by less studied species like Trichoderma longibrachiatum [...] Read more.
Fungal diseases are a major threat to the horticultural industry and cause substantial postharvest losses. While secondary metabolites from Trichoderma sp. have been explored for their antifungal properties, limited information exists on the phenolic compounds produced by less studied species like Trichoderma longibrachiatum. In this study, phenolic compounds were extracted from a liquid culture of T. longibrachiatum using various solvents and methods (conventional and ultrasonic-assisted). Phenolic compounds were quantified by spectrophotometry and identified by high-performance liquid chromatography with diode array detection (HPLC-DAD). The antifungal activity against Alternaria alternata and Fusarium oxysporum was determined by mycelial growth inhibition assays, maximum growth rate (µmax) by the Gompertz equation, and spore germination tests. Although no significant differences (p ≥ 0.05) were found between the extraction methods, the type of solvent significantly influenced the phenolic content (p ≤ 0.05). Extraction with 70% ethanol showed the highest content of phenolic compounds and flavonoids. More than eight phenolic compounds were detected. Further, this is the first report of the phenolics ferulic, chlorogenic and p-coumaric acids identification in T. longibrachiatum, along with flavonoids such as epicatechin and quercetin, among others. The 70% ethanolic extracts notably inhibited the mycelial growth of A. alternata and F. oxysporum, reducing their maximum growth rate by 1.5 and 1.4 mm/h, respectively. Furthermore, p-coumaric and ferulic acids significantly inhibited spore germination of both pathogens, with a minimum inhibitory concentration (MIC) of 1.5 mg/mL and a minimum fungicidal concentration (MFC) of 2 mg/mL. These findings demonstrate the potential of T. longibrachiatum and its phenolic compounds as viable alternatives for biological control in horticulture and postharvest disease management. Full article
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Figure 1

Figure 1
<p>Method used to determine the effect of the <span class="html-italic">T. longibrachiatum</span> extract on the mycelial growth of the phytopathogens to be analyzed.</p>
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<p>Total phenolic (<b>A</b>) and flavonoid (<b>B</b>) contents in extracts obtained from <span class="html-italic">T. longibrachiatum</span> after 14 days of incubation, using different solvents and UAE. Et: 100% ethanol; Et 70: 70% ethanol; Met: 100% methanol; Met 80: 80% methanol; Wt: water; and Ac: 100% acetone. Data represent the mean ± standard deviation, n = 6. The vertical bars represent the standard errors of the means. Different letters indicate significant differences among the different solvents by Tukey’s test at 5% probability (<span class="html-italic">p</span> ≤ 0.05).</p>
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<p>Profile of phenolic compound extracts obtained from <span class="html-italic">T. longibrachiatum</span> after 14 days of incubation. Phenols at 280 nm (<b>A</b>): gallic acid (1), protocateic acid (2), chlorogenic acid (3), <span class="html-italic">ρ-</span>coumaric acid (4), ferulic acid (5), isoferulic acid (6) and <span class="html-italic">o</span>-coumaric acid (7). Flavonoids at 270 nm (<b>B</b>): catechin (8), epicatechin (9), phloridzin (10), morin (11), and quercetin (12). The question mark (?) means that the peak was not identified.</p>
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<p>Mycelial growth of <span class="html-italic">A. alternata</span> (AA) (<b>A</b>) and <span class="html-italic">F. oxysporum</span> (FO) (<b>B</b>) versus ethanolic extract of <span class="html-italic">T. longibrachiatum</span> as a function of time in hours (h). The asterisk (*) indicates significant differences between treatment and control at the same evaluation time by Tukey’s test at 5% probability. The vertical bars represent the standard deviation of the means (n = 5). (<b>C</b>) Effect of the ethanolic extract of <span class="html-italic">T. longibrachiatum</span> on mycelial growth of phytopathogens in PDA.</p>
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<p>Antifungal activity of ethanolic extract of <span class="html-italic">T. longibrachiatum</span> on spore germination and mycelial growth of <span class="html-italic">A. alternata</span> (<b>A</b>) and <span class="html-italic">F. oxysporum</span> (<b>B</b>) after 24 h post-treatment.</p>
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<p>Effect of ferulic (<b>A</b>,<b>B</b>), <span class="html-italic">p</span>-coumaric (<b>C</b>,<b>D</b>), and chlorogenic (<b>E</b>,<b>F</b>) acids at different concentrations on the percentage of spore germination of <span class="html-italic">A. alternata</span> (AA) and <span class="html-italic">F. oxysporum</span> (FO) during 48 h of incubation. The asterisk (*) indicates significant differences between treatments and the control at the same evaluation time by Tukey’s test at 5% probability. The vertical bars represent the standard deviation of the means (n = 5).</p>
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<p>Effect of <span class="html-italic">p</span>-coumaric acid on (<b>A</b>) spore germination of <span class="html-italic">A. alternata</span> and <span class="html-italic">F. oxysporum</span> (microscopical view) after 24 h post-treatment. (<b>B</b>) Effect of different concentrations of phenolic acids on the micelial growth of <span class="html-italic">A. alternata</span> and <span class="html-italic">F. oxysporum</span> on PDA.</p>
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13 pages, 256 KiB  
Article
Maximum and Minimum Results for the Green’s Functions in Delta Fractional Difference Settings
by Pshtiwan Othman Mohammed, Carlos Lizama, Alina Alb Lupas, Eman Al-Sarairah and Mohamed Abdelwahed
Symmetry 2024, 16(8), 991; https://doi.org/10.3390/sym16080991 - 5 Aug 2024
Viewed by 685
Abstract
The present paper is dedicated to the examination of maximum and minimum results based on Green’s functions via delta fractional differences for a class of fractional boundary problems. For such a purpose, we built the corresponding Green’s functions based on the falling factorial [...] Read more.
The present paper is dedicated to the examination of maximum and minimum results based on Green’s functions via delta fractional differences for a class of fractional boundary problems. For such a purpose, we built the corresponding Green’s functions based on the falling factorial functions. In addition, using the constructed Green’s function, the positivity of the function and its corresponding delta function are presented. We also verified the occurrence of two distinct functions with the same Green’s function. The maximality and minimality of the Green’s function show a good qualitative agreement. Finally, we considered some special examples to explain the obtained results. Full article
(This article belongs to the Special Issue Symmetry in Geometric Theory of Analytic Functions)
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