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25 pages, 641 KiB  
Systematic Review
Trigger Point Therapy Techniques as an Effective Unconventional Method of Treating Tension Headaches: A Systematic Review
by Aleksandra Dolina, Michał Baszczowski, Wiktor Wilkowicz, Grzegorz Zieliński, Jacek Szkutnik and Piotr Gawda
Healthcare 2024, 12(18), 1868; https://doi.org/10.3390/healthcare12181868 (registering DOI) - 17 Sep 2024
Abstract
Background/Objectives The main aim of the literature review was to determine whether different trigger point therapy techniques are effective in decreasing the intensity, frequency, and duration of tension-type headaches. An additional aim was to assess the impact of trigger point therapy on other [...] Read more.
Background/Objectives The main aim of the literature review was to determine whether different trigger point therapy techniques are effective in decreasing the intensity, frequency, and duration of tension-type headaches. An additional aim was to assess the impact of trigger point therapy on other physical and psychological variables in tension-type headaches. Methods This literature review was conducted in accordance with PRISMA guidelines, and the inclusion and exclusion criteria were developed using the PICO(s) strategy. Searches were carried out in four databases: PubMed, Science Direct, Cochrane Library, and PEDro. Results Of the 9 included studies with 370 participants, 6 studies were randomised controlled trials, 2 were pilot studies, and 1 was a case report. Conclusions Trigger point therapy has reduced the duration, intensity, and frequency of headaches. Dry needling, ischaemic compression, Positional Relaxation Techniques, and massage protocols focused on deactivating trigger points are effective methods of unconventional treatment of tension-type headaches. Full article
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<p>Flow diagram of study selection.</p>
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19 pages, 3108 KiB  
Article
Phytochemical Characterization of Bilberries and Their Potential as a Functional Ingredient to Mitigate Ochratoxin A Toxicity in Cereal-Based Products
by Denisia Pașca, Massimo Frangiamone, Luciano Mangiapelo, Pilar Vila-Donat, Oana Mîrza, Ana-Maria Vlase, Doina Miere, Lorena Filip, Jordi Mañes, Felicia Loghin and Lara Manyes
Nutrients 2024, 16(18), 3137; https://doi.org/10.3390/nu16183137 (registering DOI) - 17 Sep 2024
Abstract
Mycotoxin contamination of cereals and cereal-based products is a serious problem for food safety. Antioxidant-rich ingredients such as bilberries (Vaccinium myrtillus L., VM) may mitigate their harmful effects. Firstly, total phenolic content, antioxidant activity, and analytical phytochemical composition (hydroxycinnamic and hydroxybenzoic acids, [...] Read more.
Mycotoxin contamination of cereals and cereal-based products is a serious problem for food safety. Antioxidant-rich ingredients such as bilberries (Vaccinium myrtillus L., VM) may mitigate their harmful effects. Firstly, total phenolic content, antioxidant activity, and analytical phytochemical composition (hydroxycinnamic and hydroxybenzoic acids, flavanols, flavonols, and anthocyanins) were assessed in lyophilized wild bilberries from Romania. Secondly, this study evaluated bilberries’ effects on reducing ochratoxin A (OTA) bioaccessibility and cytotoxicity. An in vitro digestion model was developed and applied to four different types of bread: Control, VM (2%), OTA (15.89 ± 0.13 mg/kg), and OTA (16.79 ± 0.55 mg/kg)-VM (2%). The results indicated that VM decreased OTA bioaccessibility by 15% at the intestinal level. OTA-VM digests showed improved Caco-2 cell viability in comparison to OTA digests across different exposure times. Regarding the alterations in Jurkat cell line cell cycle phases and apoptosis/necrosis, significant increases in cell death were observed using OTA digests (11%), while VM addition demonstrated a protective effect (1%). Reactive oxygen species (ROS) analysis confirmed these findings, with OTA-VM digests showing significantly lower ROS levels compared to OTA digests, resulting in a 3.7-fold decrease. Thus, bilberries exhibit high potential as a functional ingredient, demonstrating protection in OTA mitigation effects. Full article
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<p>Chemical structure of OTA.</p>
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<p>Gastric and intestinal OTA bioaccessibility (%) calculated after the in vitro simulated digestion (n = 3). Significant differences between OTA and OTA-VM are indicated as <span class="html-italic">p</span> &lt; 0.05 (*), <span class="html-italic">p</span> &lt; 0.001 (***). Bread with Ochratoxin A (OTA); bread with Ochratoxin A + <span class="html-italic">Vaccinium myrtillus</span> L. 2% (OTA-VM).</p>
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<p>Cell viability in differentiated Caco-2 cells after exposure to various dilutions of intestinal digests (3.2 μM OTA for no dilution) over five different time points. The data are presented as mean ± SD (n = 4). Significant differences between OTA and OTA-VM intestinal digests at the same dilution and exposure time are denoted as <span class="html-italic">p</span> &lt; 0.05 (*); <span class="html-italic">p</span> &lt; 0.01 (**); <span class="html-italic">p</span> &lt; 0.001 (***). OTA: bread with wheat flour and barley contaminated with Ochratoxin A; OTA-VM: bread with wheat flour and barley flour contaminated with Ochratoxin A and <span class="html-italic">Vaccinium myrtillus</span> L. 2%.</p>
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<p>Effect of 1/10 intestinal bread digests (0.32 μM OTA) exposure for 7 days on Jurkat cells cycle phases (Sub G<sub>0</sub>/G<sub>1</sub>; G<sub>0</sub>/G<sub>1</sub>; S; G<sub>2</sub>/M). Data are presented as mean ± SD (n = 4) and significant differences between intestinal digests (VM, OTA, and OTA-VM) and control or OTA and OTA-VM are indicated as <span class="html-italic">p</span> &lt; 0.05 (*); <span class="html-italic">p</span> &lt; 0.01 (**); <span class="html-italic">p</span> &lt; 0.001 (***). The acronyms for cell cycle phases are G for growth, S for DNA synthesis, and M for mitosis. C: wheat flour bread; VM: bread with wheat flour and <span class="html-italic">Vaccinium myrtillus</span> L. 2%; OTA: bread with wheat flour and barley flour contaminated with Ochratoxin A; OTA-VM: bread with wheat flour and barley flour contaminated with Ochratoxin A and <span class="html-italic">Vaccinium myrtillus</span> L. 2%.</p>
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<p>Effect of intestinal digests (0.32 μM OTA) exposure on Jurkat cells after 7 days on the apoptosis and necrosis pathway. Significant differences between intestinal digests (VM, OTA, and OTA-VM) and control or OTA and OTA-VM are indicated as <span class="html-italic">p</span> &lt; 0.05 (*); <span class="html-italic">p</span> &lt; 0.001 (***) and data graph bars represent the mean ± SD (n = 4). C: wheat flour bread; VM: bread with wheat flour and <span class="html-italic">Vaccinium myrtillus</span> L. 2%; OTA: bread with wheat flour and barley flour contaminated with Ochratoxin A; OTA-VM: bread with wheat flour and barley flour contaminated with Ochratoxin A and <span class="html-italic">Vaccinium myrtillus</span> L. 2%.</p>
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<p>Reactive oxygen species (ROS) measured by flow cytometry using Jurkat cells after 7 days of exposure. (<b>A</b>) Effect of intestinal digests (0.32 μM OTA) on ROS generation. Mean fluorescence intensity is expressed as relative units with ± SD (n = 4). (<b>B</b>) MitoSOX-based flow cytometry detection of mitochondrial ROS in Jurkat cells following exposure to intestinal digests (0.32 μM OTA). Data in the histogram are presented as mean ± SD (n = 4). Significant differences between intestinal digests (VM, OTA, and OTA-VM) and the control, or between OTA and OTA-VM, are indicated as <span class="html-italic">p</span> &lt; 0.001 (***). C: wheat flour bread; VM: bread with wheat flour and <span class="html-italic">Vaccinium myrtillus</span> L. 2%; OTA: bread with wheat flour contaminated with Ochratoxin A; OTA-VM: bread with wheat flour contaminated with Ochratoxin A and <span class="html-italic">Vaccinium myrtillus</span> L. 2%; TBHP: tert-Butyl hydroperoxide.</p>
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<p>Effect of intestinal digest (0.32 μM OTA) on mitochondrial mass using Jurkat cells after 7 days of exposure. Median fluorescence intensity (MFI) (n = 4) of MitoTracker dye measured after incubation of Jurkat cells with intestinal digests. Significant differences between intestinal digests (VM, OTA, and OTA-VM) and control or OTA and OTA-VM are indicated as <span class="html-italic">p</span> &lt; 0.001 (***). C: wheat flour bread; VM: bread with wheat flour and <span class="html-italic">Vaccinium myrtillus</span> L. 2%; OTA: bread with wheat flour contaminated with Ochratoxin A; OTA-VM: bread with wheat flour contaminated with Ochratoxin A and <span class="html-italic">Vaccinium myrtillus</span> L. 2%.</p>
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27 pages, 1358 KiB  
Review
How Protein Depletion Balances Thrombosis and Bleeding Risk in the Context of Platelet’s Activatory and Negative Signaling
by Hector Montecino-Garrido, Andrés Trostchansky, Yolanda Espinosa-Parrilla, Iván Palomo and Eduardo Fuentes
Int. J. Mol. Sci. 2024, 25(18), 10000; https://doi.org/10.3390/ijms251810000 (registering DOI) - 17 Sep 2024
Abstract
Platelets are small cell fragments that play a crucial role in hemostasis, requiring fast response times and fine signaling pathway regulation. For this regulation, platelets require a balance between two pathway types: the activatory and negative signaling pathways. Activatory signaling mediators are positive [...] Read more.
Platelets are small cell fragments that play a crucial role in hemostasis, requiring fast response times and fine signaling pathway regulation. For this regulation, platelets require a balance between two pathway types: the activatory and negative signaling pathways. Activatory signaling mediators are positive responses that enhance stimuli initiated by a receptor in the platelet membrane. Negative signaling regulates and controls the responses downstream of the same receptors to roll back or even avoid spontaneous thrombotic events. Several blood-related pathologies can be observed when these processes are unregulated, such as massive bleeding in activatory signaling inhibition or thrombotic events for negative signaling inhibition. The study of each protein and metabolite in isolation does not help to understand the role of the protein or how it can be contrasted; however, understanding the balance between active and negative signaling could help develop effective therapies to prevent thrombotic events and bleeding disorders. Full article
(This article belongs to the Section Biochemistry)
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<p>Diagram of Platelet signaling. The illustration represents a cellular signaling pathway, from a receptor’s reception by a signal, its transmission and amplification via a transducer, and the subsequent execution by an effector. Activators and inhibitors modulate the intensity of the signal, while the system’s equilibrium is preserved through positive and negative feedback mechanisms, inducing or reducing the platelet aggregation.</p>
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<p>Platelet signaling pathways are interconnected. The platelet signaling pathway is a complex network of molecules and events involved in platelet activation, secretion, shape change, aggregation, and calcium homeostasis. Proteins are rectangles, inhibitors are circles, transmembrane proteins are hexagons, and compounds are words without borders. The green background stands for activatory proteins, while the red background is for proteins from negative signaling, the red arrow represents inhibition, and the grey arrow represents normal interaction. AKT: Protein Kinase B; ASK1: Apoptosis Signal-regulating Kinase 1; C3: Complement component 3; Ca<sup>2+</sup>: Calcium; CD148: protein tyrosine phosphatase receptor type J; CD154: CD40 ligand; CD40: Tumor necrosis factor receptor superfamily member 5; CIB1: Calcium and integrin-binding protein 1; CLP36: PDZ and LIM domain protein 1; DASA: diarylsulfonamide; DCa: dichloroacetate; DHEA: dehydroepiandrosterone sulphate; Dok-1: Docking protein 1; Dok-2: Docking protein 2; ELMO1: Engulfment and cell motility protein 1; ERK: Mitogen-activated protein kinase 15; ERp57: Protein disulfide-isomerase A3; FlnA: Filamin A; Fyn: Tyrosine-protein kinase Fyn; GDF-15: Growth/differentiation factor 15; Gi: Guanine nucleotide-binding protein G(i); GPCRs: G protein-coupled receptor; GPIb: Platelet glycoprotein Ib; GPV: Platelet glycoprotein V; GPIX: Platelet glycoprotein IX; GPVI: Platelet glycoprotein VI; GRIP1: Glutamate receptor-interacting protein 1; GSK3β: Glycogen synthase kinase-3 beta; Gα(i2): Guanine nucleotide-binding protein G(i2) subunit alpha; Gα13: Guanine nucleotide-binding protein G(13) subunit alpha-1; HMGB1: High mobility group protein B1; IKKβ: Inhibitor of nuclear factor kappa-B kinase subunit beta; ILK: Integrin-linked protein kinase; iPLA2γ: Calcium-independent phospholipase A2-gamma; IκB: NF-kappa-B inhibitor alpha; JNK1: Mitogen-activated protein kinase 8; KIND3: Fermitin family homolog 3; M3BIM: benzimidazole-derived oligosaccharide; MEK: Mitogen-activated protein kinase kinase; Munc18-2: Mammalian Uncoordinated-18; P2X1: P2X purinoceptor 1; P2Y12: P2Y purinoceptor 12; p38 MAPK: Mitogen-activated protein kinase 11; Panx: Pannexin-1; PAR1: Protease-activated receptor-1; PDK1: 3-Phosphoinositide-dependent protein kinase 1; PECAM-1: Platelet and Endothelial Cell Adhesion Molecule 1; PI3K: Phosphatidylinositol 4,5-bisphosphate 3-kinase; PKA: protein kinase A; PKC: protein kinase C; PP2B: Serine/threonine-protein phosphatase 2B; PTEN: Phosphatase and tensin homolog; RAC1: Ras-related C3 botulinum toxin substrate 1; raf1: proto-oncogene c-RAF; Rap1: Ras-related protein 1; RGS 16: Regulator of G protein signaling 16; RhoA: Ras homolog family member A; RhoG: Ras homolog family member G; RIAM: Rap1–GTP-interacting adapter molecule; RIP3: Receptor-interacting protein kinase 3; ROCK: Rho-associated protein kinase; SERCA3: Sarcoplasmic/endoplasmic reticulum Calcium ATPase 3; SFK: Src kinase family; Shp2: Src homology region 2-containing protein tyrosine phosphatase 2; SNARE: SNAP Receptors; Src: Proto-oncogene tyrosine-protein kinase Src; TAIII: timosaponin A-III; TLR4/cGKI: toll-like receptor 4; TMX1: Thioredoxin-related Transmembrane Protein 1; TNFR: Tumor necrosis factor receptors; TP receptor: thromboxane receptor; TRAF3: TNF receptor-associated factor 3; TSSC6: Tumor-suppressing STF cDNA 6; TXA2: thromboxane A2; VPS33B: Vacuolar protein sorting-associated protein 33B.</p>
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48 pages, 10113 KiB  
Review
The Development of Poly(lactic acid) (PLA)-Based Blends and Modification Strategies: Methods of Improving Key Properties towards Technical Applications—Review
by Jacek Andrzejewski, Subhasis Das, Vitali Lipik, Amar K. Mohanty, Manjusri Misra, Xiangyu You, Lay Poh Tan and Boon Peng Chang
Materials 2024, 17(18), 4556; https://doi.org/10.3390/ma17184556 (registering DOI) - 17 Sep 2024
Abstract
The widespread use of poly(lactic acid) (PLA) from packaging to engineering applications seems to follow the current global trend. The development of high-performance PLA-based blends has led to the commercial introduction of various PLA-based resins with excellent thermomechanical properties. The reason for this [...] Read more.
The widespread use of poly(lactic acid) (PLA) from packaging to engineering applications seems to follow the current global trend. The development of high-performance PLA-based blends has led to the commercial introduction of various PLA-based resins with excellent thermomechanical properties. The reason for this is the progress in the field of major PLA limitations such as low thermal resistance and poor impact strength. The main purpose of using biobased polymers in polymer blends is to increase the share of renewable raw materials in the final product rather than its possible biodegradation. However, in the case of engineering applications, the focus is on achieving the required properties rather than maximizing the percentage of biopolymer. The presented review article discusses the current strategies to optimize the balance of the key features such as stiffness, toughness, and heat resistance of PLA-based blends. Improving of these properties requires molecular structural changes, which together with morphology, crystallinity, and the influence of the processing conditions are the main subjects of this article. The latest research in this field clearly indicates the high potential of using PLA-based materials in highly demanding applications. In the case of impact strength modification, it is possible to obtain values close to 800 J/m, which is a value comparable to polycarbonate. Significant improvement can also be confirmed for thermal resistance results, where heat deflection temperatures for selected types of PLA blends can reach even 130 °C after modification. The modification strategies discussed in this article confirm that a properly conducted process of selecting the blend components and the conditions of the processing technique allows for revealing the potential of PLA as an engineering plastic. Full article
13 pages, 3778 KiB  
Article
Functional Interdependence of Anoctamins May Influence Conclusions from Overexpression Studies
by Jiraporn Ousingsawat, Rainer Schreiber and Karl Kunzelmann
Int. J. Mol. Sci. 2024, 25(18), 9998; https://doi.org/10.3390/ijms25189998 (registering DOI) - 17 Sep 2024
Abstract
Anoctamin 6 (ANO6, TMEM16F) is a phospholipid (PL) scramblase that moves PLs between both plasma membrane (PM) leaflets and operates as an ion channel. It plays a role in development and is essential for hemostasis, bone mineralization and immune defense. However, ANO6 has [...] Read more.
Anoctamin 6 (ANO6, TMEM16F) is a phospholipid (PL) scramblase that moves PLs between both plasma membrane (PM) leaflets and operates as an ion channel. It plays a role in development and is essential for hemostasis, bone mineralization and immune defense. However, ANO6 has also been shown to regulate cellular Ca2+ signaling and PM compartments, thereby controlling the expression of ion channels such as CFTR. Given these pleiotropic effects, we investigated the functional interdependence of the ubiquitous ANO6 with other commonly co-expressed anoctamins. As most expression studies on anoctamins use HEK293 human embryonic kidney cells, we compared ion currents, PL scrambling and Ca2+ signals induced by the overexpression of anoctamins in HEK293 wild-type parental and ANO6-knockout cells. The data suggest that the endogenous expression of ANO6 significantly affects the results obtained from overexpressed anoctamins, particularly after increasing intracellular Ca2+. Thus, a significant interdependence of anoctamins may influence the interpretation of data obtained from the functional analysis of overexpressed anoctamins. Full article
(This article belongs to the Special Issue Ion Conductance and Ion Regulation in Human Health and Disease)
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<p>Knockout of ANO6 in HEK293 cells. (<b>A</b>) RT-PCR of ANO6 expressed in HEK293 parental and HEK293 KO-ANO6 cells. Reduced band size in KO-ANO6 cells indicates deletion in exon 5. (<b>B</b>) RT-PCR with a 3′ primer downstream of the deletion did not produce a band in KO-ANO6 cells due to the premature stop codon. (<b>C</b>) Western blotting of ANO6 in parental cells and lack of ANO6 expression in KO-ANO6 cells. (<b>D</b>) RT-PCR showing comparison of expression of other anoctamins in parental cells and HEK293 KO-ANO6 cells. All blots and RT-PCR were performed as triplicates.</p>
Full article ">Figure 2
<p>CFTR is not activated after siRNA-knockdown of ANO6 but can be stimulated in KO-ANO6 cells. (<b>A</b>,<b>B</b>) Whole-cell current overlays and current/voltage (I/V) relationships of CFTR-expressing HEK293 cells treated with scrambled RNA (<span class="html-italic">p</span> = 0.00011) (<b>A</b>) or siRNA for ANO6 (no activation) (<b>B</b>). Cells were stimulated with IBMX (100 µM) and forskolin (2 µM) to activate CFTR. (<b>C</b>) Summary of current densities for I/F-activated whole-cell currents indicates abolished CFTR currents in cells treated with siRNA for ANO6. Inset indicates significant inhibition of ANO6 expression by siRNA (<span class="html-italic">p</span> = 0.0013) au = arbitrary units. (<b>D</b>,<b>E</b>) Comparison of CFTR whole-cell currents in parental (<span class="html-italic">p</span> = 0.00092) and KO-ANO6 (<span class="html-italic">p</span> = 0.0011) cells. (<b>F</b>) Summary of current densities indicates attenuated CFTR currents, which, however, were present in both parental and KO-ANO6 cells (<span class="html-italic">p</span> = 0.0018 and <span class="html-italic">p</span> = 0.0021). Mean ± SEM (number of experiments). * significant activation by I/F (<span class="html-italic">p</span> &lt; 0.05; paired <span class="html-italic">t</span>-test). <sup>#</sup> significant difference when compared to scrambled (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test). <sup>§</sup> significant difference when compared to scrambled (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test).</p>
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<p>Knockout of ANO6 enhances basal Ca<sup>2+</sup> influx and store-operated Ca<sup>2+</sup> entry (SOCE). (<b>A</b>,<b>C</b>) Measurement of [Ca<sup>2+</sup>]<sub>i</sub> using Fura2. Removal of extracellular Ca<sup>2+</sup> (Ca<sup>2+</sup> free) and subsequent emptying of ER Ca<sup>2+</sup> stores by cyclopiazonic acid (CPA; 10 µM). Re-addition of extracellular Ca<sup>2+</sup> in the presence of CPA induced a rise in intracellular Ca<sup>2+</sup>. (<b>B</b>,<b>D</b>) Summaries for the effects of siRNA-knockdown of ANO6 expression and ANO6-knockout on basal Ca<sup>2+</sup> (<span class="html-italic">p</span> = 0.029 and <span class="html-italic">p</span> = 0.0078), CPA-induced rise in [Ca<sup>2+</sup>]<sub>i</sub> (no differences) and SOCE (not significant and <span class="html-italic">p</span> = 0.0092). Mean ± SEM (number of experiments). <sup>#</sup> significant difference between siRNA and scrambled or parental and KO-ANO6 (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test).</p>
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<p>Effects of ANO6 knockdown on whole-cell currents by overexpressed ANO1 and ANO9. Whole-cell current overlays and I/V curves in parental and KO-ANO6 cells stimulated with Iono (1 µM) in mock transfected cells (no activation) (<b>A</b>) and cells overexpressing ANO1 (<span class="html-italic">p</span> = 0.0032 and <span class="html-italic">p</span> = 0.0041) (<b>B</b>) or ANO9 (<span class="html-italic">p</span> = 0.0034 and <span class="html-italic">p</span> = 0.041) (<b>C</b>). (<b>D</b>) Summary for Iono-induced current densities detected in parental and KO-ANO6 cells (<span class="html-italic">p</span> = 0.0048). Mean ± SEM (number of experiments). * significant activation by Iono (<span class="html-italic">p</span> &lt; 0.05; paired <span class="html-italic">t</span>-test). <sup>#</sup> significant difference between siRNA and scrambled or parental and KO-ANO6 (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test).</p>
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<p>PL scrambling by intracellular anoctamins depends on expression of ANO6. (<b>A</b>) Four-quadrant blots for parental and KO-ANO6 cells expressing ANO3 or ANO6 or mock-transfected cells under control conditions and after stimulation with Iono (10 µM/10 min). Summary of Iono-induced Annexin V exposure (% cells positive for AnxV) in parental (<b>B</b>) and KO-ANO6 cells (<b>C</b>). Cells overexpressed various, predominantly intracellular, anoctamins or were mock-transfected. Mean ± SEM (number of experiments). # significant activation by Iono (<span class="html-italic">p</span> = 0.038–0.0087; unpaired <span class="html-italic">t</span>-test). <sup>§</sup> significant difference when compared to mock (<span class="html-italic">p</span> = 0.044–0.018; ANOVA). <sup><span>$</span></sup> significant difference when compared to parental (<span class="html-italic">p</span> = 0.047–0.0088; unpaired <span class="html-italic">t</span>-test).</p>
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<p>The effects of anoctamins on [Ca<sup>2+</sup>]<sub>i</sub> signals depend on the expression of ANO6. Summaries for CPA/Ca<sup>2+</sup>-free induced ER-store emptying (<b>A</b>,<b>C</b>,<b>E</b>,<b>G</b>) (<span class="html-italic">p</span> = 0.042–0.0091) and SOCE (<b>B</b>,<b>D</b>,<b>F</b>,<b>H</b>) (<span class="html-italic">p</span> = 0.045–0.0017) in parental and KO-ANO6 cells expressing ANO1, ANO3, ANO8, and ANO9. Mean ± SEM (number of experiments). <sup>#</sup> significant difference when compared to mock (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test). <sup>§</sup> significant difference when compared to parental (<span class="html-italic">p</span> &lt; 0.05; unpaired <span class="html-italic">t</span>-test).</p>
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16 pages, 1182 KiB  
Review
The Effect of Dietary Types on Gut Microbiota Composition and Development of Non-Communicable Diseases: A Narrative Review
by Martin Soldán, Ľubica Argalášová, Lucia Hadvinová, Bonzel Galileo and Jana Babjaková
Nutrients 2024, 16(18), 3134; https://doi.org/10.3390/nu16183134 (registering DOI) - 17 Sep 2024
Abstract
Introduction: The importance of diet in shaping the gut microbiota is well established and may help improve an individual’s overall health. Many other factors, such as genetics, age, exercise, antibiotic therapy, or tobacco use, also play a role in influencing gut microbiota. Aim: [...] Read more.
Introduction: The importance of diet in shaping the gut microbiota is well established and may help improve an individual’s overall health. Many other factors, such as genetics, age, exercise, antibiotic therapy, or tobacco use, also play a role in influencing gut microbiota. Aim: This narrative review summarizes how three distinct dietary types (plant-based, Mediterranean, and Western) affect the composition of gut microbiota and the development of non-communicable diseases (NCDs). Methods: A comprehensive literature search was conducted using the PubMed, Web of Science, and Scopus databases, focusing on the keywords “dietary pattern”, “gut microbiota” and “dysbiosis”. Results: Both plant-based and Mediterranean diets have been shown to promote the production of beneficial bacterial metabolites, such as short-chain fatty acids (SCFAs), while simultaneously lowering concentrations of trimethylamine-N-oxide (TMAO), a molecule associated with negative health outcomes. Additionally, they have a positive impact on microbial diversity and therefore are generally considered healthy dietary types. On the other hand, the Western diet is a typical example of an unhealthy nutritional approach leading to an overgrowth of pathogenic bacteria, where TMAO levels rise and SCFA production drops due to gut dysbiosis. Conclusion: The current scientific literature consistently highlights the superiority of plant-based and Mediterranean dietary types over the Western diet in promoting gut health and preventing NCDs. Understanding the influence of diet on gut microbiota modulation may pave the way for novel therapeutic strategies. Full article
(This article belongs to the Special Issue The Role of Preventive Nutrition in Cardio-Metabolic Disease)
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<p>Characteristics of three distinct dietary types. Abbreviations: SCFAs—short-chain fatty acids, TMAO—trimethylamine-N-oxide, CRC—colorectal cancer, PUFAs—polyunsaturated fatty acids, EVOO—extra virgin olive oil. Created in BioRender. Soldán, M. (2024) <a href="http://BioRender.com/a05r617" target="_blank">BioRender.com/a05r617</a> (accessed on 8 September 2024).</p>
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14 pages, 7608 KiB  
Case Report
Peri-Implant Tissue Stability: A Series of Five Case Reports on an Innovative Implant Design
by Marco Aurélio Bianchini, Mario Escobar, Maria Elisa Galarraga-Vinueza, Thalles Yurgen Balduino and Sergio Alexandre Gehrke
Appl. Sci. 2024, 14(18), 8354; https://doi.org/10.3390/app14188354 (registering DOI) - 17 Sep 2024
Abstract
Background/Aim: The stability of peri-implant tissues is crucial for the long-term success of dental implant treatments. A new cervical implant design has been developed to address the challenges associated with peri-implant tissue stability, featuring a concave cervical portion to increase tissue volume in [...] Read more.
Background/Aim: The stability of peri-implant tissues is crucial for the long-term success of dental implant treatments. A new cervical implant design has been developed to address the challenges associated with peri-implant tissue stability, featuring a concave cervical portion to increase tissue volume in this area. The present study aimed to clinically evaluate the effectiveness of the new cervical implant design in maintaining peri-implant tissue stability. Materials and Methods: Five clinical cases involving completely edentulous patients were selected, in which 25 implants were installed. The marginal bone level around each implant was assessed at three different time points—T0: immediately after the prosthesis installation, T1: 6 months post installation, and T2: at the last control visit, up to 38 months later. Measurements were taken to analyze changes in marginal bone levels (MBLs) and the keratinized mucosa (KM) over time. Furthermore, the keratinized mucosa (KM) around the implants was evaluated. Results: The mean and standard deviation values of the marginal bone levels at each time point were as follows—T0: 0.59 ± 0.55 mm; T1: 1.41 ± 0.59 mm; T2: 1.76 ± 0.69 mm. Statistical analysis showed significant differences across the time points (ANOVA p < 0.0001). The overall mean KM values were 3.85 mm for T1 and T2, showing the stability of the peri-implant soft tissues at ≥1-year controls. Conclusion: Within the limitations of the present study, the results showed that the Collo implants presented measured MBL values increasing within the time range analyzed in each case but within the normal values cited in the literature for these types of rehabilitation treatments. However, the measured KM values presented, in all cases, an average above the values referenced in the literature as a minimum for maintaining the health of the peri-implant tissues. Full article
(This article belongs to the Special Issue Implant Dentistry: Advanced Materials, Methods and Technologies)
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<p>Schematic image of the innovative new design of the Collo implant inserted into the bone tissue. The figure provides a visual representation of how this novel implant design may contribute to the stability and sealing of peri-implant tissues, particularly highlighting the intricate details of the cervical portion of the implant.</p>
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<p>Image of implant placement positioned at bone level.</p>
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<p>Polymeric acrylic resin implant-supported fixed prostheses with cobalt–chrome sub-structure, acrylic resin prosthetic teeth, and pink acrylic resin gingiva.</p>
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<p>Mesial MBL measurement with periapical radiography using Image J software 2.1.4.7.</p>
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<p>Maxilla full-arch implant-supported rehabilitation with Collo implants. (<b>A</b>) Clinical photo showing the peri-implant tissue adapted surrounding the multiunit abutments; (<b>B</b>) radiographical assessment at the immediate loading implant placement and at (<b>C</b>) 6 months and (<b>D</b>) 12 months.</p>
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<p>Mandible full-arch implant-supported rehabilitation with Collo implants. (<b>A</b>) Clinical photo showing the peri-implant tissue adapted surrounding the multiunit abutments; (<b>B</b>) radiographical assessment at the immediate loading implant placement and at (<b>C</b>) 6 months and (<b>D</b>) 38 months.</p>
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<p>Maxilla full-arch implant-supported rehabilitation with Collo implants. (<b>A</b>) Clinical photo showing the peri-implant tissue adapted surrounding the multiunit abutments; (<b>B</b>) radiographical assessment at the immediate loading implant placement and at (<b>C</b>) 6 months and (<b>D</b>) 24 months.</p>
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<p>Mandible full-arch implant-supported rehabilitation with Collo implants. (<b>A</b>) Clinical photo showing the peri-implant tissue adapted surrounding the multiunit abutments; (<b>B</b>) radiographical assessment at the immediate loading implant placement and at (<b>C</b>) 6 months and (<b>D</b>) 36 months.</p>
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<p>Mandible full-arch implant-supported rehabilitation with Collo implants. (<b>A</b>) Clinical photo showing the peri-implant tissue adapted surrounding the multiunit abutments; (<b>B</b>) radiographical assessment at the immediate loading implant placement and at (<b>C</b>) 6 months and (<b>D</b>) 12 months.</p>
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<p>Occlusal and buccal view of the peri-implant soft tissue showing a healthy aspect surrounding the multiunit implant component.</p>
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<p>Graph distribution of the data collected at each time point: (T0) immediately after installation of the prosthesis, (T1) 6 months later, and (T2) at the time of the last control visit.</p>
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17 pages, 3902 KiB  
Article
Combination of JAKi and HDACi Exerts Antiangiogenic Potential in Cutaneous T-Cell Lymphoma
by Fani Karagianni, Christina Piperi, Sara Valero-Diaz, Camilla Amato, Jose Pedro Vaque, Berta Casar and Evangelia Papadavid
Cancers 2024, 16(18), 3176; https://doi.org/10.3390/cancers16183176 (registering DOI) - 17 Sep 2024
Viewed by 75
Abstract
Angiogenesis plays a pivotal role in the growth and metastasis of tumors, including the development and progression of cutaneous lymphomas. The chick embryo CAM model has been utilized in various studies to assess the growth rate, angiogenic potential, and metastatic capability of different [...] Read more.
Angiogenesis plays a pivotal role in the growth and metastasis of tumors, including the development and progression of cutaneous lymphomas. The chick embryo CAM model has been utilized in various studies to assess the growth rate, angiogenic potential, and metastatic capability of different tumor types and malignant cell lines. However, the precise mechanisms of angiogenesis in CTCL and the influence of Ruxolitinib or Resminostat on angiogenesis in hematological malignancies and solid tumors are not well understood. Recent in vitro and in vivo data have demonstrated the synergistic inhibition of tumorigenesis and metastasis in experimental models of CTCL when using the combination of Resminostat (HDACi) with Ruxolitinib (JAKi). The present work aims to elucidate the effects of this combination on the tumor microenvironment’s vascular components. We investigated the effects of Ruxolitinib (JAKi) in combination with Resminostat (HDACi) treatment in transendothelial migration of CTCL cells (106 MyLa and SeAx) by using a transwell-based transendothelial migration assay and tumor angiogenesis in vivo. We used the CTCL chick embryo CAM model with xenografted tumors derived from implanted MyLa and SeAx cells and administered topically 15 μM ruxolitinib and 5 μM Resminostat every two days during a 5-day period. JAKi and HDACi inhibited CTCL cell transendothelial migration by 75% and 82% (p < 0.05) in both CTCL engrafted cells (MyLa and SeAx, respectively) compared to the untreated group. Moreover, the combination of ruxolitinib with resminostat blocked angiogenesis by significantly reducing the number of blood vessel formation by 49% and 34% in both MyLa and SeAx, respectively (p < 0.05), indicating that the proposed combination exerted significant anti-angiogenic effects in the CAM CTCL model. Overall, these data provide valuable insights into potential therapeutic strategies targeting angiogenesis in CTCL, paving the way for more effective treatment approaches in the future. Full article
(This article belongs to the Special Issue Skin Cancers as a Paradigm Shift: From Pathobiology to Treatment)
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<p>Ruxolitinib/Resminostat inhibited transendothelial migration in MyLa and SeAx engrafted cells in chick embryo model. Values represent mean ± standard error of the mean (SEM) for three independent experiments. Welchs’ <span class="html-italic">t</span>-test was implemented for comparison of two independent groups. One-way ANOVA analysis with Welch correction was performed for multiple comparison tests. Significance was defined as <span class="html-italic">p</span> ≤ 0.05 and denoted as: ** <span class="html-italic">p</span> &lt; 0.01 **** <span class="html-italic">p</span> &lt; 0.001, ns: not significant. Analysis was performed using GraphPad Prism 8 software (San Diego, CA, USA).</p>
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<p>Ruxolitinib/Resminostat blocked angiogenesis in MyLa (<b>A</b>) and SeAx (<b>B</b>) engrafted cells in chick embryo model. Representative images of (<b>A</b>) patterns of vascular branching and IKOSA blood vessels map (<b>left panel</b>) and its quantification (<b>right panel</b>) in grafted CTCL microtumors into the CAM treated as indicated. Arrows in the image indicate the effect of drugs on blood vessel density and integrity. Combination of ruxolitinib and resminostat resulted in the development of thin and collapsed blood vessels with reduced size lumens compared to control. Values represent mean ± SEM for four independent experiments, each employing 10–12 embryos per treatment variant. * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.005, ns: not significant by one-way ANOVA test.</p>
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<p>Expression levels of angiogenesis-related genes in MyLa/SeAx engrafted cells in chick embryo model after treatment with resminostat and/or ruxolitinib. Combination treatment decreased VEGFA (<b>A</b>) and increased VEGFB (<b>B</b>) in CTCL cells engrafted in chich embryos compared to vehicle. The bars are the means determined in three (<span class="html-italic">n</span> = 3) independent experiments using 10–12 embryos per variant. * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.005, ns: not significant by one-way ANOVA test.</p>
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<p>Ruxolitinib/Resminostat decreased hemoglobin levels in MyLa (<b>A</b>) and SeAx (<b>B</b>) engrafted cells in chick embryo model compared to vehicle. The bars are the means determined in three (<span class="html-italic">n</span> = 3) independent experiments using 10–12 embryos per variant. * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, **** <span class="html-italic">p</span> &lt; 0.001 by one-way ANOVA test.</p>
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<p>Ruxolitinib/Resminostat decreased tumor mass in MyLa (<b>A</b>) and SeAx (<b>B</b>) engrafted cells in chick embryo model compared to vehicle. Data show mean ± SEM from three (<span class="html-italic">n</span> = 3) independent experiments, each employing 12–14 embryos per treatment variant. * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.005, **** <span class="html-italic">p</span> &lt; 0.001 by one-way ANOVA test.</p>
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<p><span class="html-italic">HDAC</span> gene expression and HDAC activity in MyLa (<b>A</b>) and SeAx (<b>B</b>) engrafted cells in chick embryo model. Combination of Ruxolitinib/Resminostat and resminostat alone decreased HDAC activity levels in MyLa and SeAx engrafted cells in chick embryo model. Data show mean ± SEM from three (<span class="html-italic">n</span> = 3) independent experiments, each employing 10–12 embryos per treatment variant. ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.005 , ns: not significant by one-way ANOVA test.</p>
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<p>Western blot analyses in CTCL CAM onplant microtumors for key implicated pathways. Portions of microtumors were lysed and analyzed in MyLa (A) and SeAx (B) CAM onplant microtumors for the activation levels p-AKT (Ser473), p-ERK (Tyr 204), p-STAT5 (Tyr694/699), and GADPH in . Data show mean ± SEM from three (<span class="html-italic">n</span> = 3) independent experiments. <span class="html-italic">p</span> values: * &lt; 0.05, ** &lt; 0.01, *** &lt; 0.005, **** &lt; 0.001 by one-way ANOVA test.</p>
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20 pages, 2269 KiB  
Article
Genotype Characterization and MiRNA Expression Profiling in Usher Syndrome Cell Lines
by Wesley A. Tom, Dinesh S. Chandel, Chao Jiang, Gary Krzyzanowski, Nirmalee Fernando, Appolinaire Olou and M. Rohan Fernando
Int. J. Mol. Sci. 2024, 25(18), 9993; https://doi.org/10.3390/ijms25189993 (registering DOI) - 17 Sep 2024
Viewed by 91
Abstract
Usher syndrome (USH) is an inherited disorder characterized by sensorineural hearing loss (SNHL), retinitis pigmentosa (RP)-related vision loss, and vestibular dysfunction. USH presents itself as three distinct clinical types, 1, 2, and 3, with no biomarker for early detection. This study aimed to [...] Read more.
Usher syndrome (USH) is an inherited disorder characterized by sensorineural hearing loss (SNHL), retinitis pigmentosa (RP)-related vision loss, and vestibular dysfunction. USH presents itself as three distinct clinical types, 1, 2, and 3, with no biomarker for early detection. This study aimed to explore whether microRNA (miRNA) expression in USH cell lines is dysregulated compared to the miRNA expression pattern in a cell line derived from a healthy human subject. Lymphocytes from USH patients and healthy individuals were isolated and transformed into stable cell lines using Epstein–Barr virus (EBV). DNA from these cell lines was sequenced using a targeted panel to identify gene variants associated with USH types 1, 2, and 3. Microarray analysis was performed on RNA from both USH and control cell lines using NanoString miRNA microarray technology. Dysregulated miRNAs identified by the microarray were validated using droplet digital PCR technology. DNA sequencing revealed that two USH patients had USH type 1 with gene variants in USH1B (MYO7A) and USH1D (CDH23), while the other two patients were classified as USH type 2 (USH2A) and USH type 3 (CLRN-1), respectively. The NanoString miRNA microarray detected 92 differentially expressed miRNAs in USH cell lines compared to controls. Significantly altered miRNAs exhibited at least a twofold increase or decrease with a p value below 0.05. Among these miRNAs, 20 were specific to USH1, 14 to USH2, and 5 to USH3. Three miRNAs that are known as miRNA-183 family which are crucial for inner ear and retina development, have been significantly downregulated as compared to control cells. Subsequently, droplet digital PCR assays confirmed the dysregulation of the 12 most prominent miRNAs in USH cell lines. This study identifies several miRNA signatures in USH cell lines which may have potential utility in Usher syndrome identification. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
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<p>Venn diagram of miRNAs that are differently expressed in USH phenotypes. Venn diagram depicting the distribution of shared and unique differentially expressed miRNAs according to DESeq2 analysis. Among the 798 miRNAs detected by microarray, 92 miRNAs were differently expressed in USH phenotypes. Among these 92 miRNAs, 20 were specific to USH1, 14 to USH2, 5 to USH3, 2 to USH1 and USH2, 5 to USH1 and USH3, and 10 to USH2 and USH3; the remaining 36 were common to all USH types.</p>
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<p>PCA biplot showing differences between miRNA expression profiles. Each point represents the miRNA profile of a sample; yellow circles are control cell lines; colored triangles represent Usher cell lines: USH1 (blue), USH2 (grey), USH3 (brown). Vectors labeled with miRNA are the top 6 miRNAs contributing to variation in the first two principal components. The table indicates the results from PERMANOVA analysis, where Pr (&gt;F) indicates significance at values less than 0.05.</p>
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<p>Heatmap of differential miRNAs of interest from DESeq2 contrasts of genotype and phenotype. Red tiling indicates downregulated miRNA expression, while green tiling indicates upregulated miRNA expression. Rows and columns were clustered by hierarchical clustering. Vertical clusters (<b>A</b>) and (<b>B</b>) show relationships between expression patterns, predominantly separating miRNAs upregulated in the control group in cluster (<b>A</b>), and upregulated miRNAs in the Usher phenotypes are represented in cluster (<b>B</b>). Row names in the heatmap denote the phenotype of the cell line and which replicate, as well as the genotype reported from exome sequencing.</p>
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<p>NanoString miRNA counts of 6 downregulated candidate miRNAs in Usher cell lines, compared to controls. Statistical comparisons were made for each miRNA using a one-way ANOVA with Tukey’s adjustment for multiple comparisons, with significance denoted at <span class="html-italic">p</span> &lt; 0.05. Genotypes with the same letter above the error bars are statistically the same, while differing letters indicate significant differences from one another (i.e., <span class="html-italic">p</span>-values ≤ 0.05). As shown, each panel (<b>A</b>–<b>F</b>) represents an individual miRNA.</p>
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<p>NanoString miRNA counts of 6 upregulated candidate miRNAs in Usher cell lines, compared to controls. Statistical comparisons were made for each miRNA using a one-way ANOVA with Tukey’s adjustment for multiple comparisons, with significance denoted at <span class="html-italic">p</span> ≤ 0.05. Genotypes with the same letter above the error bars are statistically the same, while differing letters indicate significant differences from one another (i.e., <span class="html-italic">p</span>-values ≤ 0.05). As shown, each panel (<b>A</b>–<b>F</b>) represents an individual miRNA.</p>
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<p>Quantitative analysis of 6 downregulated candidate miRNAs in Usher cell lines, compared to controls using droplet digital PCR technology. Statistical comparisons were made for each miRNA using a one-way ANOVA with Tukey’s adjustment for multiple comparisons, with significance denoted at <span class="html-italic">p</span> &lt; 0.05. Genotypes with the same letter above the error bars are statistically the same, while differing letters indicate significant differences from one another (i.e., <span class="html-italic">p</span>-values ≤ 0.05). As shown, each panel (<b>A</b>–<b>F</b>) represents an individual miRNA.</p>
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<p>Quantitative analysis of 6 upregulated candidate miRNAs in Usher cell lines, compared to controls using droplet digital PCR technology. Statistical comparisons were made for each miRNA using a one-way ANOVA with Tukey’s adjustment for multiple comparisons, with significance denoted at <span class="html-italic">p</span> &lt; 0.05. Genotypes with the same letter above the error bars are statistically the same, while differing letters indicate significant differences from one another (i.e., <span class="html-italic">p</span>-values ≤ 0.05). As shown, each panel (<b>A</b>–<b>F</b>) represents an individual miRNA.</p>
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23 pages, 7661 KiB  
Article
Transformation of Modern Urban Park Based on User’s Spatial Perceived Preferences: A Case Study of Kowloon Walled City Park in Hong Kong
by Shuyi Di, Zimeng Chen, Zhipeng Ren, Tianyi Ding, Zheng Zhao, Yilei Hou and Zejin Chen
Forests 2024, 15(9), 1637; https://doi.org/10.3390/f15091637 (registering DOI) - 16 Sep 2024
Viewed by 231
Abstract
Urban parks enhance residents’ quality of life and health by fostering a harmonious relationship between people and nature, so effective park design needs to prioritize ecological protection, sustainable landscapes, and practical spatial structures to achieve these benefits. This study takes the typical case [...] Read more.
Urban parks enhance residents’ quality of life and health by fostering a harmonious relationship between people and nature, so effective park design needs to prioritize ecological protection, sustainable landscapes, and practical spatial structures to achieve these benefits. This study takes the typical case of urban park renovation and reconstruction—Kowloon Walled City Park—as an example to conduct research and divides the interior of the park into four types of areas: contemporary built-up area; historical relic area; natural–folk custom area; and ecological conservation area. Based on 405 valid questionnaire data for respondents, this study conducts empirical research using a combination of the Semantic Differential (SD) method, Importance Performance Analysis (IPA) model, and unordered multivariate logit choice model, comprehensively describes and analyzes individual spatial perception and preferences, and further discusses the potential factors affecting individual perception preferences. The results show that there are differences in many characteristics between different areas in Kowloon Walled City Park. At the same time, people generally prefer park areas that integrate modern and traditional elements, natural and cultural environments, and pay attention to the balance between naturalness and sociality in park design. These results provide useful information for planners, developers, and others, as well as data for designing urban park construction with higher practical value and natural benefits. Full article
(This article belongs to the Section Urban Forestry)
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<p>Kowloon Walled City Park before and now (the above pictures come from the Internet (<a href="https://image.baidu.com" target="_blank">https://image.baidu.com</a> (accessed on 22 July 2024)) and have been reassembled by the author).</p>
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<p>Categorization of the internal area of Kowloon Walled City Park (the above pictures were personally taken by the author and have been reassembled).</p>
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<p>Importance–Performance Analysis (IPA) Framework.</p>
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<p>SD evaluation curve of Kowloon Walled City Park.</p>
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<p>Spatial Characteristics of Various Elements within the Kowloon Walled City Park: Main Buildings with Lakes and Green Areas.</p>
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<p>Spatial Characteristics of Various Elements within the Kowloon Walled City Park: Main Roads and Major Attractions.</p>
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<p>Map of IPA analysis results of four types of areas within Kowloon Walled City Park.</p>
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14 pages, 961 KiB  
Article
Application of Self-Polishing Copolymer and Tin-Free Nanotechnology Paint for Ships
by Yushi Wang, Cheunghwa Hsu, Guanhong Pan and Chenghao Chen
J. Mar. Sci. Eng. 2024, 12(9), 1662; https://doi.org/10.3390/jmse12091662 - 16 Sep 2024
Viewed by 278
Abstract
During a ship’s voyage, it is difficult to maintain its hull, and prolonged exposure to seawater can lead to the attachment of marine organisms, which can negatively impact the ship’s speed. The original self-polishing copolymer was a tributyltin-containing paint used for applying two [...] Read more.
During a ship’s voyage, it is difficult to maintain its hull, and prolonged exposure to seawater can lead to the attachment of marine organisms, which can negatively impact the ship’s speed. The original self-polishing copolymer was a tributyltin-containing paint used for applying two layers of protective coating onto a ship’s bottom plate. According to International Maritime Organization (abbreviated as IMO) regulations, users are no longer allowed to use paints containing tributyltin. Therefore, manufacturers have developed a tributyltin-free paint, known as tin-free nanotechnology paint, which can be used as a replacement for the base coat on ship bottom plates. This study involves the use of a self-polishing copolymer spray and tin-free nanotechnology paint. A model coated with these two types of paint will be observed underwater to study the growth of marine organisms. Additionally, fuel consumption will be analyzed through underwater inspections and sea trials. Based on the experimental data, it is known that tin-free nanotechnology paint can significantly reduce the need for repairs in factories and greatly decrease maintenance costs when compared to self-polishing copolymers. Full article
(This article belongs to the Section Ocean Engineering)
18 pages, 1911 KiB  
Article
Effect of Pit and Soil Types on Growth and Development, Nutrient Content and Fruit Quality of Pomegranate in the Central Deccan Plateau Region, India
by Rajagopal Vadivel, Kotha Sammi Reddy, Yogeshwar Singh and Dhananjay D. Nangare
Sustainability 2024, 16(18), 8099; https://doi.org/10.3390/su16188099 (registering DOI) - 16 Sep 2024
Viewed by 227
Abstract
To enhance pomegranate production on marginal gravelly lands, standardized planting techniques were evaluated in an 8-year-old orchard. Trenching, wider pit excavation, pit digging, and auger digs with dimensions of 1 and 2 m were employed. Utilizing native soil from barren land, with or [...] Read more.
To enhance pomegranate production on marginal gravelly lands, standardized planting techniques were evaluated in an 8-year-old orchard. Trenching, wider pit excavation, pit digging, and auger digs with dimensions of 1 and 2 m were employed. Utilizing native soil from barren land, with or without spent wash, and mixing it with black soil up to 1 m deep, growth parameters, leaf nutrients, fruit production, and fruit quality were assessed. The trench and wider pit methods outperformed others, yielding greater above-ground biomass (>70.3 kg tree−1), root biomass (>24.5 kg, tree−1), and cross-sectional area (>3.30 m2 tree−1). These methods also produced longer roots (>4.0 m tree−1) and higher leaf phosphorus (>0.28%) and potassium (>1.81%) levels, fruit juice content (>48.50%), and total soluble solids (>16.05°) compared to other planting methods. This resulted in higher and more sustainable fruit yield production under the trench and wider pit planting methods (>7.21 t ha−1). Similarly, the native and black soil mixture produced healthy fruit trees, improved fruit quality, and sustainably higher fruit yield over the native soil alone. In summary, the trench and wider pit methods (2–3 m3), combined with a soil mixture, are recommended for sustainable, high-quality fruit production in shallow gravelly terrains, thereby improving food security and the livelihoods of farmers in arid regions. Full article
(This article belongs to the Section Sustainable Agriculture)
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<p>Study site location in the Central Deccan Plateau region (Baramati, Pune District in Maharashtra sate).</p>
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<p>Innovative planting techniques for sustainable pomegranate cultivation in the shallow skeletal land.</p>
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<p>The interaction effect of planting pits and soil types on root biomass (kg tree<sup>−1</sup>) in shallow and gravelly land (Capital letters indicate differences among pit types, and the small letters indicate differences among soil types).</p>
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<p>The variations of root length distribution at (<b>A</b>) horizontal and (<b>B</b>) vertical distances under different planting pits followed under the shallow and gravelly land situation. (Capital letters indicate differences among the spread distances, and the small letters indicate differences among the pit types).</p>
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<p>The variations of root length distribution at (<b>A</b>) horizontal and (<b>B</b>) vertical distances under different planting pits followed under the shallow and gravelly land situation. (Capital letters indicate differences among the spread distances, and the small letters indicate differences among the pit types).</p>
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<p>Effect of pit size and soil types (NSBS—Native and Black Soil mixture, NS—Native Soil and NSSW—Native Soil Saturated with Spent Wash) on pomegranate yield between 4th and 8th years of plantings. (Capital letters indicate differences among pit types, and the small letters indicate differences among soil types).</p>
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<p>A linear functional relationship between pit volumes (m<sup>3</sup>) and fruit production (t ha<sup>−1</sup>) from 8-year-old pomegranate under the shallow and gravelly barren land situation.</p>
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38 pages, 1853 KiB  
Review
Interactions of SARS-CoV-2 with Human Target Cells—A Metabolic View
by Wolfgang Eisenreich, Julian Leberfing, Thomas Rudel, Jürgen Heesemann and Werner Goebel
Int. J. Mol. Sci. 2024, 25(18), 9977; https://doi.org/10.3390/ijms25189977 (registering DOI) - 16 Sep 2024
Viewed by 189
Abstract
Viruses are obligate intracellular parasites, and they exploit the cellular pathways and resources of their respective host cells to survive and successfully multiply. The strategies of viruses concerning how to take advantage of the metabolic capabilities of host cells for their own replication [...] Read more.
Viruses are obligate intracellular parasites, and they exploit the cellular pathways and resources of their respective host cells to survive and successfully multiply. The strategies of viruses concerning how to take advantage of the metabolic capabilities of host cells for their own replication can vary considerably. The most common metabolic alterations triggered by viruses affect the central carbon metabolism of infected host cells, in particular glycolysis, the pentose phosphate pathway, and the tricarboxylic acid cycle. The upregulation of these processes is aimed to increase the supply of nucleotides, amino acids, and lipids since these metabolic products are crucial for efficient viral proliferation. In detail, however, this manipulation may affect multiple sites and regulatory mechanisms of host-cell metabolism, depending not only on the specific viruses but also on the type of infected host cells. In this review, we report metabolic situations and reprogramming in different human host cells, tissues, and organs that are favorable for acute and persistent SARS-CoV-2 infection. This knowledge may be fundamental for the development of host-directed therapies. Full article
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<p>(Created with BioRender.com): (<b>A</b>) Metabolic program of SARS-CoV-2-infected cells suitable for viral replication (as derived from the discussed studies on SARS-CoV-2 replication in established cell lines and tissue cells). The major metabolic reactions supporting this program are marked by the virus symbol and broad orange arrows, and they include the following: (a) increased glucose uptake via the induction of glucose transporters, especially GLUT1 and GLUT3; (b) enhanced (aerobic) glycolysis due to increased PKM2, combined with increased lactate dehydrogenase A (LDH-A) activity, to regenerate NAD for the maintenance of glucose oxidation via glycolysis, which is necessary for the increased production of ATP, glucose-6-phosphate (G6P) (required for the initiation of PPP), and 3-phosphoglycerate (synthesis of serine/glycine, erythrose-4-phosphate); (c) activation of PPP with both arms to generate ribose-5-phosphate (R5P) and NADPH; (d) reduced OXPHOS via the inhibition of the pyruvate dehydrogenase (PDH)-mediated mitochondrial acetyl-CoA formation, which could be achieved either through the inhibition of the mitochondrial pyruvate carrier complex (MPC), which would block the entry of pyruvate (Pyr) into the mitochondria, or through the activation of pyruvate dehydrogenase kinase (PDHK), which would block the conversion of Pyr into acetyl-CoA; (e) specific metabolites normally produced in the TCA cycle and indispensable for SARS-CoV-2 replication, with α-KG, OAA, acetyl-CoA, citrate (Cit), and Suc-CoA especially able to be delivered via active TCA-cycle enzymes or various anaplerotic reactions, as α-KG can be provided via glutaminolysis, OAA via ATP-dependent PC and ATP-dependent Cit lyase (ACL), acetyl-CoA via fatty acid oxidation (FAO), Cit either via TCA-cycle enzymes from acetyl-CoA and OAA or reverse TCA-cycle reactions through the reduced carboxylation of α-KG and Suc-CoA via the TCA cycle enzyme α-KG dehydrogenase; (f) in the case of a glucose shortage, FAO is an alternative route for ATP generation. (<b>B</b>) Viral reprogramming of cellular regulators that modify metabolic fluxes in favor of SARS-CoV-2 replication. Metabolic reactions that are positively or negatively regulated through viral mechanisms are shown in orange boxes. Viral factors partaking in host-cell control are shown in orange, oval boxes indicated by a virus particle. For details and a further legend, see also <a href="#app1-ijms-25-09977" class="html-app">Figures S1 and S2</a>.</p>
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<p>(Created with BioRender.com): (<b>A</b>) Metabolic program of SARS-CoV-2-infected cells suitable for viral replication (as derived from the discussed studies on SARS-CoV-2 replication in established cell lines and tissue cells). The major metabolic reactions supporting this program are marked by the virus symbol and broad orange arrows, and they include the following: (a) increased glucose uptake via the induction of glucose transporters, especially GLUT1 and GLUT3; (b) enhanced (aerobic) glycolysis due to increased PKM2, combined with increased lactate dehydrogenase A (LDH-A) activity, to regenerate NAD for the maintenance of glucose oxidation via glycolysis, which is necessary for the increased production of ATP, glucose-6-phosphate (G6P) (required for the initiation of PPP), and 3-phosphoglycerate (synthesis of serine/glycine, erythrose-4-phosphate); (c) activation of PPP with both arms to generate ribose-5-phosphate (R5P) and NADPH; (d) reduced OXPHOS via the inhibition of the pyruvate dehydrogenase (PDH)-mediated mitochondrial acetyl-CoA formation, which could be achieved either through the inhibition of the mitochondrial pyruvate carrier complex (MPC), which would block the entry of pyruvate (Pyr) into the mitochondria, or through the activation of pyruvate dehydrogenase kinase (PDHK), which would block the conversion of Pyr into acetyl-CoA; (e) specific metabolites normally produced in the TCA cycle and indispensable for SARS-CoV-2 replication, with α-KG, OAA, acetyl-CoA, citrate (Cit), and Suc-CoA especially able to be delivered via active TCA-cycle enzymes or various anaplerotic reactions, as α-KG can be provided via glutaminolysis, OAA via ATP-dependent PC and ATP-dependent Cit lyase (ACL), acetyl-CoA via fatty acid oxidation (FAO), Cit either via TCA-cycle enzymes from acetyl-CoA and OAA or reverse TCA-cycle reactions through the reduced carboxylation of α-KG and Suc-CoA via the TCA cycle enzyme α-KG dehydrogenase; (f) in the case of a glucose shortage, FAO is an alternative route for ATP generation. (<b>B</b>) Viral reprogramming of cellular regulators that modify metabolic fluxes in favor of SARS-CoV-2 replication. Metabolic reactions that are positively or negatively regulated through viral mechanisms are shown in orange boxes. Viral factors partaking in host-cell control are shown in orange, oval boxes indicated by a virus particle. For details and a further legend, see also <a href="#app1-ijms-25-09977" class="html-app">Figures S1 and S2</a>.</p>
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16 pages, 693 KiB  
Article
Harnessing the Potential of Whey in the Creation of Innovative Food Products: Contributions to the Circular Economy
by Mihaela Adriana Tița, Valentina-Mădălina Moga, Maria Adelina Constantinescu, Cristina Maria Bătușaru and Ovidiu Tița
Recycling 2024, 9(5), 79; https://doi.org/10.3390/recycling9050079 - 16 Sep 2024
Viewed by 449
Abstract
Food waste and by-products are intricately linked to sustainable food production, as reducing waste can play a significant role in achieving a more sustainable and efficient food system. Sustainable utilization and recovery of by-products can significantly contribute by creating strategies that can lead [...] Read more.
Food waste and by-products are intricately linked to sustainable food production, as reducing waste can play a significant role in achieving a more sustainable and efficient food system. Sustainable utilization and recovery of by-products can significantly contribute by creating strategies that can lead to cost savings and increased efficiency across the food supply chain. Worldwide, more than 40% of whey from cheese production is discarded, resulting in the loss of valuable nutrients and potentially polluting the environment. Effective use of whey reduces environmental impact and enhances manufacturing sustainability. Thus, a circular approach to food waste management in the dairy industry supports sustainability goals and creates opportunities for innovation. Whey contains most of the soluble components of milk, including a large number of serum proteins and all the essential amino acids, making it suitable for producing beverages with high nutritional value. This study aims to produce whey-based beverages with different additions to obtain dairy products with high nutritional value. Three different ingredients, sea buckthorn, ginger, and cinnamon, were chosen for their numerous health benefits to the consumer. Six samples were prepared utilizing both unmodified and deproteinized whey in a 75% proportion, with the addition of 25% sea buckthorn juice, 0.75% ginger juice, and 0.2% cinnamon powder. The resultant samples were packaged in 200 mL bottles and maintained at a controlled temperature of 6 °C to ensure optimal preservation. Given the paramount importance of consumer acceptability in novel beverage development, a comprehensive evaluation was conducted to assess the sensory properties of the formulated beverages. In addition, physico-chemical properties and their evolution over 14 days of storage were examined. The sample containing whey, sea buckthorn juice, ginger juice, and cinnamon powder received the highest marks from the tasters. The values of the physico-chemical parameters varied depending on the type of whey used and the storage period. Thus, a pH of approximately 5 and an acidity between 30 and 80 °T were recorded. The average lactose content was 4%, the average protein content was 2.5%, and the total soluble solids content was 11.5 °Brix. The beverages developed in this study represent viable alternatives for diversifying food production through sustainable, environmentally friendly technological variants. By applying circular economy principles, these products contribute to reducing food waste in the dairy industry. Full article
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<p>Evolution of pH in whey samples during 14 days of storage. Note: Red dots = mean (n = 5).</p>
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<p>Evolution of titratable acidity in whey samples during 14 days of storage. Note: Red dots = mean (n = 5).</p>
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14 pages, 3332 KiB  
Article
Myrosin Cells and Myrosinase Expression Pattern in Nasturtium (Tropaeolum majus L.)
by Ivana Restović, Nives Kević, Laura Kurić, Ivana Bočina, Elma Vuko and Ivana Vrca
Agronomy 2024, 14(9), 2108; https://doi.org/10.3390/agronomy14092108 - 16 Sep 2024
Viewed by 246
Abstract
Plants from the Brassicales order are known for the presence of a glucosinolate–myrosinase link, which is an important protection strategy against multiple stressors. The main goal of this study was to investigate the presence of the myrosinase enzyme and reveal the myrosin cell [...] Read more.
Plants from the Brassicales order are known for the presence of a glucosinolate–myrosinase link, which is an important protection strategy against multiple stressors. The main goal of this study was to investigate the presence of the myrosinase enzyme and reveal the myrosin cell ultrastructure in the vegetative organs of nasturtium. The presence, localisation and expression of the enzyme myrosinase type 1 (TGG1) at different developmental stages of Tropaeolum majus L. (nasturtium) were investigated using immunohistochemical and immunofluorescent techniques. The expression of myrosinase was detected in the vegetative organs of T. majus. During plant development, within four consecutive weeks, a decrease in myrosinase expression was noticed in all studied plant organs. The location of greater myrosinase accumulation and activity is shown to be the root, contrary to the nasturtium stem and leaf, where we found the lowest myrosinase expression. Transmission electron microscopy was used to reveal the ultrastructural features of the myrosin cells of nasturtium. Myrosin cells are usually scattered between parenchyma cells and S-cells. Mostly, they are rectangular or slightly elongated in shape and can be recognised by an electron-dense large central vacuole and an expanded rough endoplasmic reticulum. The results of this study provide new data on myrosin cell morphology and the expression pattern of myrosinase in T. majus. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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Figure 1
<p><span class="html-italic">Tropaeolum majus</span> L. sample growth in four consecutive weeks. (<b>a</b>) The samples measured in the first phase (P1) of the study: 19-day-old plants; (<b>b</b>) The samples measured in the second phase (P2) of the study: 26-day-old plants; (<b>c</b>) The samples measured in the third phase (P3): 33-day-old plants; (<b>d</b>) Morphological difference in the leaves, with older jagged-shaped leaves and younger round-shaped leaves; (<b>e</b>) The samples measured in the fourth phase (P4): 40-day-old plants; the morphological difference in the stem with some of the stems having turned brown, while most of the stems are still the usual light green (arrow).</p>
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<p>Results of sample measurements for four consecutive experimental weeks of sampling. A one-way ANOVA test was used for statistical data processing, after which Tukey’s multiple comparisons test was used to examine the difference in the (<b>a</b>) root height, (<b>b</b>) stem height, (<b>c</b>) leaf length and (<b>d</b>) total plant height in the four developmental stages. The results are presented as mean (n = 5) ± standard deviation (SD). Significance was set at * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001, and **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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<p>Immunofluorescence staining of myrosinase in sections of the vegetative nasturtium (<span class="html-italic">Tropaeolum majus</span> L.) organs using TGG1 myrosinase 1 rabbit primary antibody. Expression of the enzyme myrosinase type 1 (arrows) in the parenchyma cells of the root (<b>a</b>–<b>d</b>), stem (<b>e</b>–<b>h</b>) and leaf (<b>i</b>–<b>l</b>) is shown during four different developmental phases (P1–P4). Localisation of myrosinase type 1 in the meristematic zone of a young root (panel (<b>a</b>)) and the cells of the vascular tissue of the root (panels b, d) and the stem (panel (<b>e</b>–<b>h</b>)). Cells of the ground tissue in the vascular part of the leaf (panels (<b>i</b>–<b>l</b>)). Transverse (<b>a</b>,<b>c</b>,<b>e</b>–<b>g</b>,<b>i</b>–<b>l</b>) and longitudinal sections (<b>b</b>,<b>d</b>,<b>h</b>). pd—protoderm; gm—ground meristem; xyl—xylem; phl—phloem; arrows—myrosinase expression.</p>
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<p>Statistical analysis of the expression pattern of myrosinase type 1 in the root, stem and leaf at different developmental stages after plants sprout. Myrosinase expression was quantified by measuring the percentage of immunoreactive cell areas (% area). Two-way ANOVA and Tukey’s multiple comparison test were used for statistical analyses. Statistically significant differences were set as * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01; *** <span class="html-italic">p</span>&lt; 0.001; and **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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<p>Immunohistochemical staining of myrosinase in nasturtium tissue. Presence of myrosinase type 1 (brown colour) was observed in the root area (<b>a</b>–<b>c</b>), the vascular elements of the stem (<b>d</b>), the leaf parenchyma tissue (<b>e</b>) and the xylem vessels (<b>f</b>). P1—Phase 1; P2—Phase 2; P3—Phase 3; P4—Phase 4; arrows—myrosin cells; p phl—phloem parenchyma cells; S—S cell; arrowhead—parenchyma cells; xyl—xylem; phl—phloem.</p>
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<p>Ultrastructure of myrosin cells in the root (<b>a</b>,<b>b</b>), the stem (<b>c</b>,<b>d</b>) and the leaf (<b>e</b>,<b>f</b>) in the first phase of development. Myrosin cells (M) differ from the surrounding S-cells by their higher electron density and the presence of one large and several smaller vacuoles. S-cells (S) surround the myrosin cells and can be recognised by the very thin layer of cytoplasm and the large volume of the central vacuole. M—myrosin cell; S—S-cell; V—vacuole; ve—vessel elements; mg—myrosin granule; rER—rough endoplasmic reticulum; G—Golgi apparatus; m—mitochondrion; cw—cell wall; n—nucleus; ch—chloroplast; PPC—phloem parenchyma cell; *—protein storage vesicle; arrow—plasmodesmal opening; CC—companion cell; ST—sieve tube element.</p>
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