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14 pages, 251 KiB  
Article
The Turkish Government’s Ambivalent Policy Response to the New Influx of Afghan Migrants through the Public Policy Tools
by Sevinç Bermek
Soc. Sci. 2024, 13(9), 487; https://doi.org/10.3390/socsci13090487 - 14 Sep 2024
Viewed by 346
Abstract
Turkey has been a hub for migrants since the Syrian crisis and has been home to 3.7 million refugees. The literature on migration focusses largely on Turkey’s response to refugees from Syria, host country citizens’ attitudes towards Syrians and their integration challenges, the [...] Read more.
Turkey has been a hub for migrants since the Syrian crisis and has been home to 3.7 million refugees. The literature on migration focusses largely on Turkey’s response to refugees from Syria, host country citizens’ attitudes towards Syrians and their integration challenges, the EU–Turkey refugee deal, and its political implications for the EU and Turkey. Nonetheless, there has been a sharp rise in the number of Afghan migrants to Turkey since the complete withdrawal of US military forces from Afghanistan in 2020. Both scholarly and grey literature highlights that Turkey has recently been an attractive hub for Afghan migrants and other ethnic minorities, following Pakistan and Iran. Nonetheless, this literature has not substantially explored the Turkish government’s attitude towards the new influx of migrants. For this purpose, the article draws upon qualitative research based on secondary and grey literature (including semi-structured interviews with representatives from migration-related NGOs in Turkey). The article underpins its findings from the public policy framework of NATO (nodality, authority, treasure, organisation) by demonstrating how Turkey’s ambivalent response to the refugee inflow is shaped by limited information (nodality), weak legal mechanisms (authority), exploitation of new inflow as cheap labour (treasure), and migration system restructuring (organisation, treasure) after the withdrawal of external actors like the EU and UNHCR. Full article
(This article belongs to the Special Issue Globalization and International Migration to the EU)
21 pages, 18685 KiB  
Article
A Novel Integrated Approach to Assess Groundwater Appropriateness for Agricultural Uses in the Eastern Coastal Region of India
by Shunmuga Priya Kaliyappan, Fahdah Falah ben Hasher, Hazem Ghassan Abdo, Pazhuparambil Jayarajan Sajil Kumar and Balamurugan Paneerselvam
Water 2024, 16(18), 2566; https://doi.org/10.3390/w16182566 - 10 Sep 2024
Viewed by 342
Abstract
Due to the increase in demand for water, the rapid growth of urbanization and industrialization is the main threat to the source and quality of groundwater. The present study aimed to assess the suitability of groundwater for agricultural purposes in coastal regions using [...] Read more.
Due to the increase in demand for water, the rapid growth of urbanization and industrialization is the main threat to the source and quality of groundwater. The present study aimed to assess the suitability of groundwater for agricultural purposes in coastal regions using integrated approaches such as the saltwater mixing index (SWMI), the mineral saturation index (MSI), the agriculture suitability index (ASI), and unsupervised machine learning (USML) techniques. The result of the SWMI revealed that 20 and 17 sample locations were highly affected by saltwater intrusion in the study region’s northern and southeastern parts during the pre- and post-monsoon seasons. The detailed analysis of electrical conductivity in groundwater revealed that 19.64% and 14.29% of the samples were unfit for irrigation purposes, especially five sample locations, during both seasons. Regarding the overall suitability of groundwater for irrigation uses, the ASI values divulged that 8.9% of the samples were unsuitable for irrigation purposes. The spatial analysis of the ASI value indicated that 43.19 and 85.33 sq. km of area were unsuitable for irrigation practices. Additionally, the USML techniques identified the most influenced parameters such as Ca2+, Mg2+, Cl, and SO42− during both seasons. The present study results help maintain proper, sustainable water management in the study region. Full article
(This article belongs to the Section Oceans and Coastal Zones)
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Figure 1
<p>Climatic variation in the study region for last 30 years [<a href="#B43-water-16-02566" class="html-bibr">43</a>].</p>
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<p>Geological composition of the study region [<a href="#B44-water-16-02566" class="html-bibr">44</a>].</p>
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<p>Methodology for calculating the ASI value for irrigation suitability.</p>
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<p>Spatial classification of the SAR of groundwater pre and post monsoons.</p>
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<p>RSC classification of groundwater pre and post monsoons.</p>
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<p>Percentage sodium classification of groundwater during both seasons.</p>
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<p>Spatial analysis of KR pre and post monsoons.</p>
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<p>PI classification of groundwater pre and post monsoons.</p>
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<p>MAR spatial distribution in the study region pre and post monsoons.</p>
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<p>PS spatial distribution pre and post monsoons.</p>
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<p>Spatial analysis of chloride contamination in the study region.</p>
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<p>Spatial analysis of groundwater classification based on the SMI.</p>
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<p>Spatial analysis of the ASI classification in the study region.</p>
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<p>Scree plot of the rotation matrix (<b>a</b>) pre monsoon and (<b>b</b>) post monsoon (the red dots represent the number components).</p>
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19 pages, 4491 KiB  
Article
Myrtus communis L. Essential Oil Exhibits Antiviral Activity against Coronaviruses
by Dar-Yin Li, Matthew G. Donadu, Taylor Shue, Georgios Dangas, Antonis Athanasiadis, Shuiyun Lan, Xin Wen, Basem Battah, Stefania Zanetti, Vittorio Mazzarello, Stefan G. Sarafianos, Marco Ferrari and Eleftherios Michailidis
Pharmaceuticals 2024, 17(9), 1189; https://doi.org/10.3390/ph17091189 - 10 Sep 2024
Viewed by 429
Abstract
Human coronaviruses are a continuous threat to the human population and have limited antiviral treatments, and the recent COVID-19 pandemic sparked interest in finding new antiviral strategies, such as natural products, to combat emerging coronaviruses. Rapid efforts in the scientific community to identify [...] Read more.
Human coronaviruses are a continuous threat to the human population and have limited antiviral treatments, and the recent COVID-19 pandemic sparked interest in finding new antiviral strategies, such as natural products, to combat emerging coronaviruses. Rapid efforts in the scientific community to identify effective antiviral agents for coronaviruses remain a focus to minimize mortalities and global setbacks. In this study, an essential oil derived from Myrtus communis L. (MEO) is effective against HCoV-229E and HCoV-OC43 virus infections in comparison to two FDA-approved drugs, Remdesivir and Nirmatrelvir. Gas-chromatography and mass spectrometry were used to identify the chemical composition of MEO. Slight antioxidant activity was observed in MEO, indicating a role in oxidative stress. A dose–response curve measuring the EC50 indicates a high potency against HCoV-229E and HCoV-OC43 virus infections on Huh7.5 cells with low cytotoxicity using a PrestoBlue cell viability assay. Our findings demonstrate that MEO exhibits potent antiviral activity against HCoV-229E and HCoV-OC43 on Huh7.5 cells within a low-cytotoxicity range, but not on SARS-CoV-2. Artificial bacterial chromosome plasmids that expressed SARS-CoV-2 used for replicon—to determine viral replication and viral assembly/egress on HEK293T/17 cells—and virus-like particles on Huh7.5-AT cells—to determine viral entry and assembly/egress—showed no antiviral activity with MEO in comparison to Remdesivir. This study reveals the potential effectiveness of MEO as an alternative natural remedy to treat human coronaviruses and a potential antiviral agent for future coronavirus infections. Full article
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<p>MEO inhibits HCoV-229E infection. (<b>A</b>) Experimental design of MEO experiment for dose–response curve. Huh7.5 cells were seeded in two 96-well plates with Remdesivir and Nirmatrelvir as antiviral controls. The experiment was performed in triplicate, and the starting concentration for MEO was 1:1000 (0.8469 mg/mL) and received a 1:2 serial dilution. The starting concentrations for Remdesivir and Nirmatrelvir were 250 nM and 25 µM, respectively, and were diluted with a 1:2 serial dilution. After HCoV-229E was added to the plates an hour after drug treatment, cells were fixed with 4% PFA one day post-infection. Immunofluorescent staining (IF) was performed to visualize infected cells using Cytation 7. (<b>B</b>) Dose–response curve showing that MEO has antiviral activity against HCoV-229E with EC<sub>50</sub> = 0.1204 mg/mL MEO concentration starting at 1:1000 (0.8469 mg/mL) with a 1:2 serial dilution and infected with 1:10 HCoV-229E virus. (<b>C</b>) Cytotoxicity assay measuring cell viability in MEO-treated Huh7.5 cells. A 1:10 (84.69 mg/mL) starting concentration for MEO was used with a 1:2 serial dilution. Huh7.5 cells treated with MEO were normalized to the untreated Huh7.5 cells.</p>
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<p>Immunofluorescent staining for HCoV-229E Spike protein. Huh7.5 cells without MEO treatment showed a mean fluorescence intensity of 22 with HCoV-229E. At a 1:2000 (0.42345 mg/mL) Myrtus concentration, the HCoV-229E viral infection has a mean fluorescence intensity of 7. Nuclei were stained with Hoechst, and HCoV-229E was stained with HCoV-229E spike protein and Alexa Fluor 488, labeled goat anti-mouse secondary antibody, and was imaged at a 1000 µm scale.</p>
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<p>MEO inhibits HCoV-OC43 infection. (<b>A</b>) Experimental layout of MEO with HCoV-OC43 infection to determine EC<sub>50</sub>. Two collagen-coated 96-wells plates were seeded with Huh7.5 cells to evaluate the dose–response curve of Remdesivir, Nirmatrelvir, and MEO. Each drug was conducted in triplicates with the starting concentration for MEO to be 1:1000 (0.8469 mg/mL) and serially diluted 1:2. The starting concentrations for Remdesivir and Nirmatrelvir were 7 µM and 25 µM, respectively, and were diluted with a 1:2 serial dilution. An hour after drug treatment, HCoV-OC43 was added, and cells were fixed with 4% PFA at 3 days post-infection. Immunofluorescent staining (IF) was performed to visualize infected cells using the Cytation 7. (<b>B</b>) A dose–response curve showed that MEO has antiviral activity against HCoV-OC43 with EC<sub>50</sub> = 1.405 mg/mL MEO concentration starting at a concentration of 1:1000 (0.8469 mg/mL) with a 1:2 serial dilution and infected with 1:20 HCoV-OC43E virus.</p>
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<p>Immunofluorescent staining for HCoV-OC43 spike protein. Huh7.5 cells without MEO treatment showed a mean fluorescence intensity of 12 with HCoV-OC43. At a 1:1000 (0.8469 mg/mL) MEO concentration, HCoV-OC43 viral infection has a mean fluorescence intensity of 4. Nuclei were stained with Hoechst and HCoV-OC43 was stained with anti-coronavirus antibody, OC-43 strain, clone 541-8F, and Alexa Fluor 488, labeled goat anti-mouse secondary antibody, and was imaged at a 1000 µm scale.</p>
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<p>MEO does not inhibit SARS-CoV-2 viral replication based on SARS-CoV-2 replicon. (<b>A</b>) Normalized SARS-CoV-2 replicon transfection to determine if MEO inhibits viral replication. Using GFP reporter in the SARS-CoV-2 replicon to calculate the percent of transfected cells, there was no difference in the number of transfected cells compared to normalized and untreated wells. NLuc activity from the SARS-CoV-2 replicon plasmid was used to quantify the amount of viral replication under MEO-treated conditions. Titration of MEO with SARS-CoV-2 replicon transfected cells showed no difference in viral replication via NLuc activity. Cell viability is not affected by SARS-CoV-2 replicon, nor by MEO cytotoxicity at the tested MEO concentrations. The relative luminescence graph validates that viral replicon is not inhibited by MEO. (<b>B</b>) Remdesivir substantially inhibited SARS-CoV-2 viral replication and normalized transfection level similar to the relative luminescence units, as untreated wells received about an eight-fold increase compared to 7.5 µM. At 15 µM of Remdesivir, cell viability dropped below 50%, exhibiting Remdesivir cytotoxicity.</p>
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<p>No inhibition against SARS-CoV-2 VLPs for MEO. (<b>A</b>) Immunofluorescence images showed no difference in VLP inhibition for untreated and MEO-treated wells at 1:200 (4.2345 mg/mL) concentration. Remdesivir inhibited SARS-CoV-2 VLP in a dose-dependent manner, which acted as positive control. To determine the percentage of cells infected with SARS-CoV-2 VLPs, the cells were counterstained with Hoechst and imaged for GFP reporter signal from the replicon plasmids and Hoechst dye using Cytation 7. All images are in 1000 µm scale. (<b>B</b>) The VLP transduction assay with MEO treatment showed similar infection levels as untreated wells. At 1:100 (8.469 mg/mL) concentration of MEO, cells were not viable, and viral replication remained consistent. (<b>C</b>) Remdesivir showed potent inhibition against SARS-CoV-2 VLP as an inhibitor of SARS-CoV-2 viral replication.</p>
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<p>MEO treatment has little impact SARS-CoV-2 Omicron BA.1 VLP formation/release. SARS-CoV-2 BA.1 VLPs were produced in HEK293T/17 cells that were pre-treated with either a 1:1000 (0.8469 mg/mL) or 1:500 (1.6938 mg/mL) concentration of MEO in DMEM (10% FBS + 1% NEAA) to assess the effect of MEO on the formation of infectious VLPs. VLPs were harvested via centrifugation and concentrated 20× using 100,000 MW Amicon filter units. VLPs were titrated on Huh7.5-AT cells at a starting dilution of 1:5 and continued with a 1:2 dilution. At one day post-transduction, the cells were counterstained with 1:5000 Hoechst dye and imaged using Cytation 7 for the number of GFP+ and total cells. Then, the cell culture supernatant was measured for NLuc activity. (<b>A</b>) Hoechst staining shows that there was a slight decrease in cell viability for VLPs formed in the presence of MEO treatment in a dose-dependent manner (<span class="html-italic">p</span> &lt; 0.0001). (<b>B</b>) Analysis of the GFP+ cells representing cells successfully transduced with VLP and undergoing replication of the replicon plasmid showed minor differences between MEO-treated and untreated VLPs, but only at the highest dilutions of VLP delivery (<span class="html-italic">p</span> = 0.01). (<b>C</b>) NLuc activity shows no difference between MEO VLPs and untreated VLPs. Overall, MEO treatment during VLP production has no effect on nascent VLP particles.</p>
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17 pages, 246 KiB  
Article
The Evolution and Sustainability of Environmental Health Services in the Azraq Refugee Camp, Jordan: A Qualitative Study
by Nikki Behnke, Brandie Banner Shackelford, Amjad Dawood, Rachel A. Oommen, Raymond Tu, Marielle Snel, Iyad Al Samawi, Samer Talozi, Darcy Anderson, Ryan Cronk and Jamie Bartram
Sustainability 2024, 16(17), 7758; https://doi.org/10.3390/su16177758 - 6 Sep 2024
Viewed by 397
Abstract
The Syrian civil war displaced more than half of the Syrian population, including over 660,000 registered refugees who fled to neighboring Jordan. Environmental health services (e.g., water, sanitation, hygiene, and solid waste management) are critical for refugee health. Still, they may strain resources [...] Read more.
The Syrian civil war displaced more than half of the Syrian population, including over 660,000 registered refugees who fled to neighboring Jordan. Environmental health services (e.g., water, sanitation, hygiene, and solid waste management) are critical for refugee health. Still, they may strain resources in host communities and must evolve in protracted crises. We studied environmental health services in the Azraq refugee camp in Jordan to identify the stakeholders and their roles in service provision, assess stakeholder communication and coordination, and evaluate sustainability. We conducted 25 interviews with stakeholders involved in environmental health service provision. We found that non-governmental and United Nations organizations had well-defined responsibilities, but the roles of donors, the Jordanian government, refugees, and the host community needed clarification. Conflicting standards and mismatched donor expectations with on-the-ground needs sometimes created challenges for coordinated and efficient service provision. The basic needs of refugees were generally met and services improved somewhat over time, but political obstacles and inadequate resources complicated the path toward sustainable services. Early incorporation of sustainability in planning and increased efforts to build the capacity of refugees to contribute and take ownership of environmental health services will likely enhance long-term environmental health service provision and development outcomes. Full article
16 pages, 1982 KiB  
Article
Peripheral Inflammation Featuring Eosinophilia or Neutrophilia Is Associated with the Survival and Infiltration of Eosinophils within the Tumor among Various Histological Subgroups of Patients with NSCLC
by Bilal Alashkar Alhamwe, Kadriya Yuskaeva, Friederike Wulf, Frederik Trinkmann, Mark Kriegsmann, Michael Thomas, Corinna Ulrike Keber, Elke Pogge von Strandmann, Felix J. Herth, Saeed Kolahian, Harald Renz and Thomas Muley
Int. J. Mol. Sci. 2024, 25(17), 9552; https://doi.org/10.3390/ijms25179552 - 3 Sep 2024
Viewed by 683
Abstract
Immune activation status determines non-small cell lung cancer (NSCLC) prognosis, with reported positive/negative associations for T helper type 2 (TH2) responses, including allergen-specific IgE and eosinophils. Our study seeks to explore the potential impact of these comorbid immune responses on the survival rates [...] Read more.
Immune activation status determines non-small cell lung cancer (NSCLC) prognosis, with reported positive/negative associations for T helper type 2 (TH2) responses, including allergen-specific IgE and eosinophils. Our study seeks to explore the potential impact of these comorbid immune responses on the survival rates of patients with NSCLC. Our retrospective study used data from the Data Warehouse of the German Center for Lung Research (DZL) and Lung Biobank at Thoraxklinik Heidelberg. We estimated the association of blood eosinophilia and neutrophilia on survival rates in an inflammatory cohort of 3143 patients with NSCLC. We also tested sensitization to food and inhalants and high-sensitivity C-reactive protein (hs-CRP) in a comorbidity cohort of 212 patients with NSCLC. Finally, we estimated the infiltration of immune-relevant cells including eosinophils, T-cells, and mast cells in a tissue inflammatory sub-cohort of 60 patients with NSCLC. Sensitization to at least one food or inhalant (sIgE) was higher in patients with adenocarcinoma (adeno-LC) than the non-adenocarcinoma (non-adeno-LC). Furthermore, hs-CRP was higher in non-adeno-LC compared with adeno-LC. Peripheral inflammation, particularly eosinophilia and neutrophilia, was associated with poor survival outcomes in NSCLC with a clear difference between histological subgroups. Finally, blood eosinophilia was paralleled by significant eosinophil infiltration into the peritumoral tissue in the lung. This study provides novel perspectives on the crucial role of peripheral inflammation, featuring eosinophilia and neutrophilia, with overall survival, underscoring distinctions between NSCLC subgroups (adeno-LC vs. non-adeno-LC). Peripheral eosinophilia enhances eosinophil infiltration into tumors. This sheds light on the complex interplay between inflammation, eosinophil infiltration, and NSCLC prognosis among various histological subtypes. Further studies are required to underscore the role of eosinophils in NSCLC among different histological subgroups and their role in shaping the tumor microenvironment. Full article
(This article belongs to the Special Issue Molecular Mechanisms of Allergy and Asthma: 3rd Edition)
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<p><b>Chronic inflammatory biomarkers in adeno-LC vs. non-adeno-LC</b>. (<b>A</b>) Patients sensitized to at least one inhalant or food allergen (sIgE &gt; 0.35 kU/L). Specific IgE was measured for a representative panel of inhalant allergens (n = 8) and food allergens (n = 6) in the sera of NSCLC patients (n = 212), of which n = 115 had adeno-LC and n = 97 non-adeno-LC. Significant differences were tested using the Mann–Whitney U-test. (<b>B</b>) Distribution of hs-CRP concentrations in adeno-LC and non-adeno-LC. Significant differences were tested using the Mann–Whitney U-test. (<b>C</b>) Distribution of hs-CRP concentrations considering the histology (adeno-LC vs. non-adeno-LC) and lung comorbidities (asthma, COPD, and neither). Both stars and cycles describe outliers. Among these outliers, stars specifically mark extreme values. The numbers of patients in each group are shown. Significant differences were tested using the Kruskal–Wallis test.</p>
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<p><b>Impact of peripheral inflammation on cumulative survival.</b> (<b>A</b>–<b>C</b>) Cumulative survival in patients with NSCLC with respect to peripheral blood eosinophil and neutrophil counts. Blue line: blood eosinophil ≤ 500 cells/µL and blood neutrophil ≤ 7700 cells/µL. Green line: neutrophilia (blood neutrophil &gt; 7700 cells/µL). Red line: eosinophilia (blood eosinophil &gt; 500 cells/µL). Purple line: both eosinophilia and neutrophilia (blood eosinophil &gt; 500 cells/µL and blood neutrophil &gt; 7700 cells/µL). Cumulative survival was tested for all patients with NSCLC (<b>A</b>); those with adeno-LC (<b>B</b>); and those with non-adeno-LC (<b>C</b>). Univariate results of pairwise comparison (log-rank test) were listed in the figure. For results of multivariate regression analyses adjusting for age, gender, stage, BMI, and smoking status, refer to <a href="#ijms-25-09552-t002" class="html-table">Table 2</a> and <a href="#ijms-25-09552-t003" class="html-table">Table 3</a>.</p>
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<p><b>Hazard ratios using Cox regression analysis model.</b> (<b>A</b>,<b>B</b>) The hazard ratio and overall survival were calculated according to subgroups (adeno-LC and vs. non-adeno-LC) controlling for tumor stage (<b>A</b>) and blood eosinophilia and neutrophilia (<b>B</b>). Hazard ratios were derived from a Cox regression analysis model.</p>
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<p><b>Distribution of eosinophils in lung cancer tissue</b>. (<b>A</b>,<b>B</b>) The distribution of infiltrated eosinophils in adeno-LC vs. non-adeno-LC, regardless of eosinophilia or neutrophilia status, in peritumoral (<b>A</b>) and intratumoral (<b>B</b>) regions. (<b>C</b>,<b>D</b>) The infiltration of eosinophils between adeno-LC and non-adeno-LC with respect to peripheral eosinophilia (blood eosinophils &gt; 500 or ≤500 cells/µL), neutrophilia (blood neutrophils &gt; 7700 or ≤7700 cells/µL), and CRP concentration (&gt;5 or ≤5 mg/L). Giemsa-stained eosinophils were counted per square millimeter in the peritumoral and intratumoral regions of the lung cancer tissue as described in the Materials and Methods. Mean ± SEM values are shown. Significant differences between and within the groups were tested using the Mann–Whitney U-test. Only significant differences are shown: <span class="html-italic">* p</span> &lt; 0.05; <span class="html-italic">*** p</span> &lt; 0.001. The colored dots in (<b>C</b>,<b>D</b>) represent the number of patients and the representative tumor stage.</p>
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37 pages, 11623 KiB  
Review
The Role of Video Cameras and Emerging Technologies in Disaster Response to Increase Sustainability of Societies: Insights on the 2023 Türkiye–Syria Earthquake
by Carlos Sousa Oliveira, Mónica Amaral Ferreira and Hugo O’Neill
Sustainability 2024, 16(17), 7618; https://doi.org/10.3390/su16177618 - 2 Sep 2024
Viewed by 898
Abstract
New technologies are being used to facilitate the recognition process during and after earthquakes. These advanced tools are essential to keep track of what is left from of the destruction suffered by the built stock. Among the new technologies are video recordings captured [...] Read more.
New technologies are being used to facilitate the recognition process during and after earthquakes. These advanced tools are essential to keep track of what is left from of the destruction suffered by the built stock. Among the new technologies are video recordings captured during seismic events, footage from drones, and satellite imagery acquired before and after the event. This review paper presents a series of examples collected from the 2023 Türkiye–Syria earthquakes to illustrate how these new technologies offer a unique and efficient way to capture, document, and transfer information among experts in seismology, earthquake engineering, and disaster management. Whenever possible, these examples are accompanied by simple qualitative explanations to enhance understanding. To demonstrate the potential of video cameras and drone imagery for quantitative analysis, in addition to the various simple examples provided, two case studies are provided—one on road blockages, and another on intensity assessment and wave attenuation as observed in video cameras. These technologies are critical and merit considerable focus, particularly video cameras, which have not received much attention recently, on helping to understand seismic wave passage and their impact on the built environment. Enhancing our use of video cameras in this context can significantly contribute to the sustainability and resilience of our society. With the rapid advancement of image analysis, we advocate for a collaborative platform for accessing and utilizing imagery materials, aiding current and future generations in analysing the causes of such tragedies. Full article
(This article belongs to the Special Issue Urban Resilience and Sustainable Construction under Disaster Risk)
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Figure 1
<p>(<b>a</b>) Anatolian plate squeezed by two plates [<a href="#B2-sustainability-16-07618" class="html-bibr">2</a>,<a href="#B3-sustainability-16-07618" class="html-bibr">3</a>,<a href="#B5-sustainability-16-07618" class="html-bibr">5</a>]; (<b>b</b>) geological faults and historical seismicity in the SE [<a href="#B4-sustainability-16-07618" class="html-bibr">4</a>], zoomed from (<b>a</b>). Note the right-lateral motion of both ruptured faults (in green). Fault rupture of approximately 300 km. Other colors represent ruptures in other events. Stars represent epicentre locations.</p>
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<p>Damage inflicted on the building stock as seen from the satellite, disaggregated by damage grades D1 to D5. (<b>a</b>) In the whole region; (<b>b</b>) Zoom in Hatay. (Basemap by mapbox. Data processed by <a href="http://hasar.cbs.gov.tr" target="_blank">hasar.cbs.gov.tr</a>, consulted March 2023).</p>
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<p>Variability of collapse and non collapse: (<b>a</b>) Collapses in Iskenderum on both sides of the road; the amount of obstruction is much larger than a 45° angle may suggest. (<b>b</b>) Partial building dismantled in Hatay, requiring total demolition (with copyright permission from PEMA [<a href="#B85-sustainability-16-07618" class="html-bibr">85</a>]).</p>
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<p>Extent of damage in several cities of Türkiye: (<b>a</b>) Mid-rise RC residential buildings that have collapsed in a side-sway manner) (capture from Video #03); (<b>b</b>) overturning of foundation (@adamaxoi).</p>
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<p>Several modes of partial and full collapse as captured by drones: (<b>a</b>) First story on the right-hand side; (<b>b</b>) right-lateral movement following the 1999 earthquake [<a href="#B88-sustainability-16-07618" class="html-bibr">88</a>], leading to an almost vertical pancake; (<b>c</b>) first story on the bottom side; (<b>d</b>) overturned building in Golbasi due to a lack of anchorage of foundations together with liquefaction [<a href="#B89-sustainability-16-07618" class="html-bibr">89</a>].</p>
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<p>(<b>a</b>,<b>b</b>). Examples of fake images. The buildings that begin with the façade collapsing are followed by the rest of the implosion. (<b>c</b>) Building that is demolished: starts collapsing, stops for a few seconds, and then restarts, ending in total collapse.</p>
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<p>The collapse of a building (red circle) during the first earthquake, M<sub>w</sub> 7.8. The clock time confirms the exact time of the onset of waves: 04:17:41 (Video #08).</p>
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<p>Video camera with interesting information related to M<sub>w</sub> 7.8 (Video #08) in Kahramanmaras: System of one-degree-of-freedom to measure the input motion (frequency 2 Hz); relative top displacement = 20 cm: PGA = 3.2 m/s<sup>2</sup> in resonance) 04:17:38 (nearly overlapping with the epicentre—the origin time was 04:17:35 local time).</p>
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<p>People swaying as captured by a video camera at night (first earthquake) (Video #08).</p>
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<p>Car balancing in the (<b>a</b>) transverse (θ = 30°) (Video #08) and (<b>b</b>) longitudinal directions (more than 5 cm displacement at 2 Hz) (Video #07b).</p>
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<p>Oscillation of lamps in houses: (<b>a</b>) at 223 km from fault (Video EMSC #13); (<b>b</b>) at 325 km (Video EMSC #17). These lamps behave like a “conical pendulum” with two angles: one corresponding to rotation (Φ) and one corresponding to inclination (θ) [<a href="#B102-sustainability-16-07618" class="html-bibr">102</a>].</p>
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<p>Schematic view of forces (A) acting on a car in the transverse direction (3 m/s<sup>2</sup> for 30°; the seismic action to move the car with locked brakes is much higher, i.e., 5–7 m/s<sup>2</sup>).</p>
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<p>Spectacular images of collapses (Sanliurfa) shown on YouTube videos: (<b>a</b>) Dust rising upward over the collapsed building. (<b>b</b>) Collapse of the building starting to crush the first-floor yellow column (@NNBC News) (Video #10a, Video #10b). (<b>c</b>) View of (<b>a</b>) rotated 90° a few seconds later due to crushing of the yellow column in (<b>b</b>) already being vertically displaced.</p>
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<p>Photo composition: before (<b>a</b>) and after (<b>b</b>) the second earthquake, M<sub>w</sub> 7.6. The front building and entire block collapsed (Gazientep) (Video #06).</p>
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<p>Full collapse of a building that falls vertically in a contained space. Little space outside the implanted zone (Video #14).</p>
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<p>Comparison before and after occurrence, showing road obstructions. In this case, the two collapses on the near right and far left sides were in the same direction.</p>
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<p>Models for road blockages as proposed by (<b>a</b>) [<a href="#B114-sustainability-16-07618" class="html-bibr">114</a>] and (<b>b</b>) [<a href="#B115-sustainability-16-07618" class="html-bibr">115</a>].</p>
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<p>Schematic representations of the full and partial collapse of RC buildings. Where <span class="html-italic">h</span> is the height, <span class="html-italic">b</span> is the width, and <span class="html-italic">n</span> is the number of stories. Blue—standing building; red—collapsed building.</p>
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<p>Schematic representations of the full and partial collapse of RC buildings. Where <span class="html-italic">h</span> is the height, <span class="html-italic">b</span> is the width, and <span class="html-italic">n</span> is the number of stories. Blue—standing building; red—collapsed building.</p>
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<p>(<b>a</b>) Randomness in the collapse process of RC buildings. In three strips of land, most buildings collapsed; (<b>b</b>) the standing buildings on the left do not show any damage to the roof (Hatay). The roofs in this area were very weak, while simple corrugated sheets were supported by very slender pilasters (see also <a href="#sustainability-16-07618-f003" class="html-fig">Figure 3</a>b) (with copyright permission from PEMA [<a href="#B85-sustainability-16-07618" class="html-bibr">85</a>]).</p>
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<p>(<b>a</b>) Randomness in the collapse process of RC buildings. In three strips of land, most buildings collapsed; (<b>b</b>) the standing buildings on the left do not show any damage to the roof (Hatay). The roofs in this area were very weak, while simple corrugated sheets were supported by very slender pilasters (see also <a href="#sustainability-16-07618-f003" class="html-fig">Figure 3</a>b) (with copyright permission from PEMA [<a href="#B85-sustainability-16-07618" class="html-bibr">85</a>]).</p>
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<p>Conversion of EMS-98 Intensities into PGAs. The black curve corresponds to the lower bound of common conversion. The USGS/Pager conversion is shown in orange dotted line [<a href="#B118-sustainability-16-07618" class="html-bibr">118</a>].</p>
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<p>PGA as a function of distance obtained from video camera footage. Black data from EMSC [<a href="#B1-sustainability-16-07618" class="html-bibr">1</a>]; the orange line marks the inclusion of data points highlighted for small distances.</p>
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<p>Comparison with values taken from video camera footage: (<b>a</b>) Wan et al. [<a href="#B120-sustainability-16-07618" class="html-bibr">120</a>]; (<b>b</b>) Baltzopoulos et al. [<a href="#B84-sustainability-16-07618" class="html-bibr">84</a>], following Bommer et al. [<a href="#B121-sustainability-16-07618" class="html-bibr">121</a>] proposal for “rock sites”.</p>
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<p>(<b>a</b>) Map with the locations points identified with video cameras for the 4:17 a.m. event; (<b>b</b>) Comparison with SM data (EEFIT 2024 Report [<a href="#B10-sustainability-16-07618" class="html-bibr">10</a>]), which correspond to inserted rectangle in (<b>a</b>).</p>
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9 pages, 268 KiB  
Article
Advancing Refugee Health Data Management: The Implementation of ICD-11 in UNRWA’s Primary Care System
by Cassandra Broadwin, Wafa’a Zeidan, Mai Siam, Nenad Kostanjsek, Henry Victor Doctor, Eman Abdelkreem Aly, Mohammad Shraim, Ghada Ballout and Akhiro Seita
Int. J. Environ. Res. Public Health 2024, 21(9), 1121; https://doi.org/10.3390/ijerph21091121 - 26 Aug 2024
Viewed by 442
Abstract
The United Nations Relief and Works Agency for Palestine Refugees in the Near East (UNRWA) was one of the earliest healthcare systems globally to implement the International Classification of Diseases, Eleventh Revision (ICD-11) across its 140 clinics serving 5.9 million Palestine refugees. This [...] Read more.
The United Nations Relief and Works Agency for Palestine Refugees in the Near East (UNRWA) was one of the earliest healthcare systems globally to implement the International Classification of Diseases, Eleventh Revision (ICD-11) across its 140 clinics serving 5.9 million Palestine refugees. This paper discusses the integration of ICD-11 into UNRWA’s cloud-based electronic medical record (EMR) system, identifying both the barriers and facilitators involved and analyzing trends in clinical documentation and healthcare utilization. The key challenges included data privacy provisions, integration into a coordinated care model, complex classification schema for primary care settings, frequent staff turnover, and limited data analysis capabilities. Conversely, facilitators included physician-tailored training and on-site support, system compatibility, a multidisciplinary team approach, policy support from UNRWA and the World Health Organization (WHO), and leadership commitment and effective change management. Medical officers (MOs) using ICD-11 reported greater satisfaction with the system’s capabilities in managing and visualizing health information. This article contributes to the discourse on health data management in complex humanitarian settings, offering insights into the benefits and challenges of implementing advanced classification systems like ICD-11. Future research should explore longitudinal impacts and further integration with global health systems, ensuring that the advancements in classification continue to support the overarching goal of health equity and access in vulnerable and hard-to-reach populations. Full article
(This article belongs to the Section Global Health)
17 pages, 13031 KiB  
Article
Accurate Deformation Retrieval of the 2023 Turkey–Syria Earthquakes Using Multi-Track InSAR Data and a Spatio-Temporal Correlation Analysis with the ICA Method
by Yuhao Liu, Songbo Wu, Bochen Zhang, Siting Xiong and Chisheng Wang
Remote Sens. 2024, 16(17), 3139; https://doi.org/10.3390/rs16173139 - 26 Aug 2024
Viewed by 638
Abstract
Multi-track synthetic aperture radar interferometry (InSAR) provides a good approach for the monitoring of long-term multi-dimensional earthquake deformation, including pre-, co-, and post-seismic data. However, the removal of atmospheric errors in both single- and multi-track InSAR data presents significant challenges. In this paper, [...] Read more.
Multi-track synthetic aperture radar interferometry (InSAR) provides a good approach for the monitoring of long-term multi-dimensional earthquake deformation, including pre-, co-, and post-seismic data. However, the removal of atmospheric errors in both single- and multi-track InSAR data presents significant challenges. In this paper, a method of spatio-temporal correlation analysis using independent component analysis (ICA) is proposed, which can extract multi-track deformation components for the accurate retrieval of earthquake deformation time series. Sentinel-1 data covering the double earthquakes in Turkey and Syria in 2023 are used to demonstrate the effectiveness of the proposed method. The results show that co-seismic displacement in the east–west and up–down directions ranged from −114.7 cm to 82.8 cm and from −87.0 cm to 63.9 cm, respectively. Additionally, the deformation rates during the monitoring period ranged from −137.9 cm/year to 123.3 cm/year in the east–west direction and from −51.8 cm/year to 45.7 cm/year in the up–down direction. A comparative validation experiment was conducted using three GPS stations. Compared with the results of the original MSBAS method, the proposed method provides results that are smoother and closer to those of the GPS data, and the average optimization efficiency is 43.08% higher. The experiments demonstrated that the proposed method could provide accurate two-dimensional deformation time series for studying the pre-, co-, and post-earthquake events of the 2023 Turkey–Syria Earthquakes. Full article
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<p>Flow chart of the proposed atmospheric delay removal algorithm.</p>
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<p>Schematic diagram of the spatial and temporal ICA on InSAR time series.</p>
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<p>Locations of 2023 Turkey–Syria earthquake sequences. SAR dataset coverage is outlined in green rectangles. Locations of epicenters and GPS stations are marked with circles and triangles, respectively.</p>
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<p>Co-seismic deformation from (<b>a</b>) descending and (<b>b</b>) ascending SAR data. The epicenters of the Mw 7.8 and Mw 7.6 earthquakes are marked with red diamonds.</p>
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<p>Deformation velocity from (<b>a</b>) descending and (<b>b</b>) ascending SAR data.</p>
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<p>Independent component analysis results of ascending data. The left column contains the spatial patterns that illustrate the spatial distributions of signals, and the right column shows the corresponding temporal feature vectors, representing the temporal contribution of each source.</p>
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<p>The ICA results of descending data. The left column contains the spatial patterns that illustrate the spatial distributions of signals, and the right column shows the corresponding temporal feature vectors, representing the temporal contribution of each source.</p>
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<p>Spatio-temporal analysis matrix: (<b>a</b>) spatial correlation matrix; and (<b>b</b>) temporal correlation matrix.</p>
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<p>Two-dimensional co-seismic deformation maps of (<b>a</b>) original west–east, (<b>b</b>) original up–down, (<b>c</b>) ICA west–east, and (<b>d</b>) ICA up–down directions.</p>
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<p>Two-dimensional deformation velocity: (<b>a</b>) original west–east; (<b>b</b>) original up–down; (<b>c</b>) ICA west–east; and (<b>d</b>) ICA up–down.</p>
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<p>Two-dimensional deformation velocity during pre-seismic period in (<b>a</b>) east–west and (<b>b</b>) up–down directions, and during post-seismic period in (<b>c</b>) east–west and (<b>d</b>) up–down directions.</p>
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<p>Time series deformation in LOS direction from InSAR and GPS datasets.</p>
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<p>Time series deformation in horizontal and vertical directions from InSAR, traditional elevation-dependent atmospheric phase trend fitting method, proposed method, and GPS datasets.</p>
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13 pages, 1603 KiB  
Article
Public and Patient Involvement in Migration Health Research: Eritrean and Syrian Refugees’ and Asylum Seekers’ Views in Switzerland
by Afona Chernet, Daniel H. Paris, Lujain Alchalabi, Jürg Utzinger and Elisabeth Reus
Healthcare 2024, 12(16), 1654; https://doi.org/10.3390/healthcare12161654 - 20 Aug 2024
Viewed by 511
Abstract
Prior research has highlighted important healthcare access and utilization issues among new forced immigrants. We aimed to explore the role that public and patient involvement (PPI) might play in enhancing accessibility and specific contributions to migration health studies. We conducted open and in-depth [...] Read more.
Prior research has highlighted important healthcare access and utilization issues among new forced immigrants. We aimed to explore the role that public and patient involvement (PPI) might play in enhancing accessibility and specific contributions to migration health studies. We conducted open and in-depth interactive virtual discussions with asylum seekers and refugees from Eritrea and Syria in Switzerland. The PPI establishment consisted of three phases: inception, training and contribution. Prior to training, the concept of PPI was not straightforward to grasp, as it was a new approach—however, after training and consecutive discussions, participants were ardent to engage actively. We conclude that PPI holds promise in regard to raising awareness, improving healthcare system accessibilities and utilization, and enhancing and strengthening migration health research. Indeed, PPI volunteers were keen to raise their community’s awareness through their networks and bridge an important gap between researchers and the public. Full article
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<p>Pivotal role of a public and patient involvement (PPI) strategy in the relationship of key stakeholders of health and care research and services.</p>
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<p>Diagrammatical presentation of establishment and three main phases of public and patient involvement (PPI) for migration health research.</p>
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<p>Sherry R. Arnstein’s ladder of participation [<a href="#B39-healthcare-12-01654" class="html-bibr">39</a>].</p>
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16 pages, 3696 KiB  
Article
Molecular Detection and Phylogenetic Relationships of Honey Bee-Associated Viruses in Bee Products
by Delka Salkova, Ralitsa Balkanska, Rositsa Shumkova, Stela Lazarova, Georgi Radoslavov and Peter Hristov
Vet. Sci. 2024, 11(8), 369; https://doi.org/10.3390/vetsci11080369 - 12 Aug 2024
Viewed by 920
Abstract
In the last few years, the isolation and amplification of DNA or RNA from the environment (eDNA/eRNA) has proven to be an alternative and non-invasive approach for molecular identification of pathogens and pests in beekeeping. We have recently demonstrated that bee pollen and [...] Read more.
In the last few years, the isolation and amplification of DNA or RNA from the environment (eDNA/eRNA) has proven to be an alternative and non-invasive approach for molecular identification of pathogens and pests in beekeeping. We have recently demonstrated that bee pollen and bee bread represent suitable biological material for the molecular identification of viral RNA. In the present study, we extracted total RNA from different bee products (pollen, n = 25; bee bread, n = 17; and royal jelly, n = 15). All the samples were tested for the presence of six of the most common honey bee-associated viruses—Deformed wing virus (DWV), Acute bee paralysis virus (ABPV), Chronic bee paralysis virus (CBPV), Sacbrood virus (SBV), Kashmir bee virus (KBV), and Black queen cell virus (BQCV)—using a reverse transcription polymerase chain reaction (RT-PCR). We successfully detected six records of DWV (10.5%, 6/57), four of ABPV (7.0%, 4/57), three of Israeli acute paralysis virus (IAPV) (5.3%, 3/57), and two of BQCV (3.5%, 2/57). Using ABPV primers, we also successfully detected the presence of IAPV. The obtained viral sequences were analyzed for phylogenetic relationships with the highly similar sequences (megablast) available in the GenBank database. The Bulgarian DWV isolates revealed a high homology level with strains from Syria and Turkey. Moreover, we successfully detected a DWV strain B for the first time in Bulgaria. In contrast to DWV, the ABPV isolates formed a separate clade in the phylogenetic tree. BQCV was closely grouped with Russian isolates, while Bulgarian IAPV formed its own clade and included a strain from China. In conclusion, the present study demonstrated that eRNA can be successfully used for molecular detection of honey bee-associated viruses in bee products. The method can assist the monitoring of the health status of honey bee colonies at the local, regional, and even national levels. Full article
(This article belongs to the Section Veterinary Microbiology, Parasitology and Immunology)
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<p>Map of the sampling sites from different regions in Bulgaria.</p>
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<p>Map presenting the distribution of the examined positive/negative samples of honey bee-associated viruses in Bulgaria.</p>
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<p>Phylogeny of Deformed wing virus (DWV) isolates from Bulgaria and other countries. The phylogenetic tree based on alignment of the fragment of RdRp gene sequences of DWV isolates from different countries was inferred by using the maximum likelihood method and the Tamura 3-parameter model and then selecting the topology with a superior log likelihood value [<a href="#B57-vetsci-11-00369" class="html-bibr">57</a>]. The indicated branching topology was evaluated by bootstrap resampling of the sequences of 10,000 replicates. Each isolate is indicated by country of isolation and GenBank accession number. Bulgarian isolates identified by this study are presented in green and red [<a href="#B12-vetsci-11-00369" class="html-bibr">12</a>].</p>
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<p>Phylogeny of Acute bee paralysis virus (ABPV) isolates from Bulgaria and other countries. The phylogenetic tree based on alignment of the part of the replicase polyprotein gene sequences of ABPV isolates (431 bp) from different countries was inferred by using the maximum likelihood method and the Tamura 3-parameter model and then selecting the topology with a superior log likelihood value [<a href="#B57-vetsci-11-00369" class="html-bibr">57</a>]. The indicated branching topology was evaluated by bootstrap resampling of the sequences of 10 000 replicates. Each isolate is indicated by country of isolation and GenBank accession number. Bulgarian isolates identified by this study are presented in green and yellow [<a href="#B54-vetsci-11-00369" class="html-bibr">54</a>].</p>
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<p>Phylogeny of Acute bee paralysis virus (IAPV) isolates from Bulgaria and other countries. The phylogenetic tree based on alignment of the part of the replicase polyprotein gene sequences of IAPV isolates (445 bp) from different countries was inferred by using the maximum likelihood method and the Tamura 3-parameter model and then selecting the topology with a superior log likelihood value [<a href="#B57-vetsci-11-00369" class="html-bibr">57</a>]. The indicated branching topology was evaluated by bootstrap resampling of the sequences of 10 000 replicates. Each isolate is indicated by country of isolation and GenBank accession number. Bulgarian isolates identified by this study are presented in green.</p>
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<p>Phylogeny of Black queen cell virus (BQCV) isolates from Bulgaria and other countries. The phylogenetic tree based on alignment of the part of the ORF 1 gene sequences of BQCV isolates (420 bp) from different countries was inferred by using the maximum likelihood method and the Tamura 3-parameter model and then selecting the topology with a superior log likelihood value [<a href="#B57-vetsci-11-00369" class="html-bibr">57</a>]. The indicated branching topology was evaluated by bootstrap resampling of the sequences of 10,000 replicates. Each isolate is indicated by country of isolation and GenBank accession number. Bulgarian isolates identified by this study are presented in green and yellow.</p>
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<p>ABPV–IAPV nucleotide alignment of a 452 bp fragment of the RdRp gene. Asterisks (*) indicate identical nucleotide positions in the alignment. The reported sequences are part of reference viral genomes (ABPV Acc. No. NC 002548; IAPV Acc. No. NC 009025). The PCR primer regions are underlined and in bold.</p>
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23 pages, 19958 KiB  
Article
Construction of a Fine Extraction Process for Seismic Methane Anomalies Based on Remote Sensing: The Case of the 6 February 2023, Türkiye–Syria Earthquake
by Yalan Huang, Jing Cui, Zeren Zhima, Dawei Jiang, Xu Wang and Lin Wang
Remote Sens. 2024, 16(16), 2936; https://doi.org/10.3390/rs16162936 - 10 Aug 2024
Viewed by 1490
Abstract
Identifying seismic CH4 anomalies via remote sensing has been verified as a legitimate method. However, there are still some problems, such as unknown reliability due to the complex characteristics of seismic anomalies. In this study, a multi-dimensional and multi-scale methane seismic anomaly [...] Read more.
Identifying seismic CH4 anomalies via remote sensing has been verified as a legitimate method. However, there are still some problems, such as unknown reliability due to the complex characteristics of seismic anomalies. In this study, a multi-dimensional and multi-scale methane seismic anomaly extraction process for remote sensing was constructed with the Robust Satellite Technique (RST) based on the Atmospheric Infrared Sounder (AIRS) CH4 data and then applied to the 2023 Türkiye–Syria earthquake. This study obtained the two-dimensional temporal–spatial distribution of methane anomalies and temporal variation in the anomaly index. Based on this, the three-dimensional profile structure of the 8-day methane anomaly was extracted to determine the reliability of the anomaly. Finally, based on the daily methane anomaly, combined with atmospheric circulation and backward trajectory analysis as auxiliary tools, the influence of air mass migration was excluded to enhance the accuracy of CH4 anomaly determination. The results show that the three-dimensional anomalous structure is consistent with the geological characteristics of tectonic activities, and it appears as a “pyramid” or “inverted pyramid” type in a three-dimensional space. The anomalies caused by air mass migration can be eliminated by combining them with synoptic-scale circulation motion. The time series calculated at the epicenter or a certain point in a region may not accurately reflect the influence of regional or specific tectonic activity in the atmosphere. Thus, the optimal determination of the range and magnitude of atmospheric anomalies caused by tectonic activities is a difficult task for future research. Full article
(This article belongs to the Section Environmental Remote Sensing)
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<p>Distribution of major active faults in Türkiye’s earthquake epicenter and study area. NAF: North Anatolian Fault; EAF: East Anatolian Fault; DSF: Dead Sea Fault (quoted from Liu et al., 2023, RS [<a href="#B45-remotesensing-16-02936" class="html-bibr">45</a>]).</p>
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<p>Flow chart of methane anomaly extraction and analysis of the 2023 Türkiye–Syria earthquake.</p>
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<p>Average background field of 8-day 300 hPa CH<sub>4</sub> VMR from 23 October 2022 to 11 March 2023 associated with Türkiye–Syria earthquake. The black star represents the epicenter.</p>
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<p>Two-dimensional spatial variation distribution of 8-day 300 hPa CH<sub>4</sub> RETIRA from 23 October 2022 to 11 March 2023 associated with Türkiye–Syria earthquake. The black star represents the epicenter.</p>
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<p>Time series of the average RETIRA index in the study area of the Türkiye–Syria earthquake and earthquake (M &gt; 6) time series. The blue line shows the earthquake of the largest magnitude in the corresponding cycle. μ represents the average of the RETIRA index; σ represents the standard deviation.</p>
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<p>Comparison of 400 hPa CH<sub>4</sub> VMR before and after the earthquake in the study area with the same period of 12 years throughout history. The black star points to the day on which the earthquake happened. Dotted red lines represent unusual significance period. The dot arrows represent the difference from the previous year.</p>
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<p>Three-dimensional spatial–vertical variation distribution of 8 day CH<sub>4</sub> RETIRA from 19 November 2022 to 11 March 2023 associated with Turkey–Syria earthquake. The red star represents the epicenter. Dotted red lines represent the approximate spatial distribution of RETIRA.</p>
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<p>Three-dimensional spatial–vertical variation distribution of daily CH<sub>4</sub> RETIRA from 20 January 2023 to 12 February 2023 associated with Türkiye–Syria earthquake. The red star represents the epicenter. Dotted red lines represent the approximate spatial distribution of RETIRA.</p>
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<p>(<b>a</b>) The 850 hPa wind field and mean sea level pressure on January 27—the red star represents the epicenter; (<b>b</b>) abnormally high point of zonal vertical wind direction—the dotted red line represents the longitude of the abnormally high point; (<b>c</b>) abnormally high point of meridional vertical wind direction—the dotted red line represents the latitude of the abnormally high point.</p>
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<p>The (<b>left</b>) figure shows the distribution of 300 hPa CH<sub>4</sub> VMR on 26 January. The red pentagon indicates the abnormally high point. The blue circle represents the end point of the backward trajectory. The dotted blue line shows the trajectory of the air mass. The (<b>right</b>) figure shows the HYSPLIT backward trajectory of air mass of the abnormally high point. The red triangle represents the location of the air mass, the red line is the track of the air mass, and the black pentagram is the height of the selected air mass.</p>
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<p>Three-dimensional spatial–vertical variation distribution of 8-day CH<sub>4</sub> RETIRA from 14 April 2021 to 12 August 2021 associated with the Alaska earthquake. The red star represents the epicenter. Dotted red lines represent the approximate spatial distribution of RETIRA.</p>
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<p>Three-dimensional spatial–vertical variation distribution of daily CH<sub>4</sub> RETIRA from 12 July 2021 to 4 August 2021 associated with the Alaska earthquake. The red star represents the epicenter. Dotted red lines represent the approximate spatial distribution of RETIRA.</p>
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<p>(<b>a</b>) The 850 hPa wind field and mean sea level pressure on June 9—the red circle represents the epicenter; (<b>b</b>) abnormally high point of zonal vertical wind direction—the dotted red line represents the longitude of an abnormally high point; (<b>c</b>) abnormally high point of meridional vertical wind direction—the dotted red line represents the latitude of an abnormally high point.</p>
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<p>The (<b>left</b>) figure shows the distribution of 300 hPa CH<sub>4</sub> VMR on June 8. The red pentagon indicates abnormally high point. The blue circle represents the end point of the backward trajectory. The dotted blue line shows the trajectory of the air mass. The (<b>right</b> figure shows the HYSPLIT backward trajectory of air mass of the abnormally high point. The red triangle represents the location of the air mass, the red line is the track of the air mass, and the black pentagram is the height of the selected air mass.</p>
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<p>Time series of CH<sub>4</sub> RETIRA index in different range conditions. The red line represents the time when the earthquake occurred. The red boxes represent the time when CH<sub>4</sub> anomalies occurred before the 2023 Türkiye–Syria earthquake.</p>
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27 pages, 1919 KiB  
Review
An Overview: Specificities and Novelties of the Cheeses of the Eastern Mediterranean
by Samir Kalit, Iva Dolenčić Špehar, Ante Rako, Darija Bendelja Ljoljić, Seval Sevgi Kirdar and Milna Tudor Kalit
Fermentation 2024, 10(8), 404; https://doi.org/10.3390/fermentation10080404 - 6 Aug 2024
Viewed by 608
Abstract
The aim of this study is to provide an overview of the specificities (milk characteristics, production process, ripening biochemistry, composition, and sensory properties) and novelties of the world-famous traditional cheeses of the Eastern Mediterranean (EM). The EM area is remarkably heterogeneous (11 countries—Egypt, [...] Read more.
The aim of this study is to provide an overview of the specificities (milk characteristics, production process, ripening biochemistry, composition, and sensory properties) and novelties of the world-famous traditional cheeses of the Eastern Mediterranean (EM). The EM area is remarkably heterogeneous (11 countries—Egypt, Israel, Lebanon, Syria, Türkiye, Cyprus, Greece, Albania, Montenegro, Bosnia and Herzegovina, and Croatia) in terms of cheese production, but there are some common features that can be associated with EM which are connected to the difficult geoclimaticconditions (hilly terrain and hot summers). Cheesemakers resort to some preservation methods, such as high salt content (in white-brined cheeses), high total solids content (in hard cheeses), the use of hot water in the treatment of the curd (in pasta filata cheeses), the addition of some local herbs with antimicrobial properties, and the use of animal skin sacks for cheese ripening. Due to the high proportion of whey as a by-product, whey is traditionally used in EM for the production of whey cheeses. Preserving the production of traditional EM cheeses is critical to maintaining their cultural significance and meeting the demand of consumers interested in the provenance, craftsmanship, and nutritional value of these unique products. Full article
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<p>Eastern Mediterranean countries.</p>
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<p>Local Turkish Beyaz peynir cheese from Burdur city.</p>
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<p>Halloumi PDO cheese after frying.</p>
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<p>Paški sir.</p>
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<p>(<b>a</b>) Turkish cheese that ripens in an animal skin sack (Tulum cheese); (<b>b</b>) Croatian cheese that ripens in an animal skin sack (Sir iz mišine).</p>
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20 pages, 19235 KiB  
Article
Utilizing Machine Learning Algorithms for the Development of Gully Erosion Susceptibility Maps: Evidence from the Chotanagpur Plateau Region, India
by Md Hasanuzzaman, Pravat Kumar Shit, Saeed Alqadhi, Hussein Almohamad, Fahdah Falah ben Hasher, Hazem Ghassan Abdo and Javed Mallick
Sustainability 2024, 16(15), 6569; https://doi.org/10.3390/su16156569 - 31 Jul 2024
Viewed by 656
Abstract
Gully erosion is a serious environmental threat, compromising soil health, damaging agricultural lands, and destroying vital infrastructure. Pinpointing regions prone to gully erosion demands careful selection of an appropriate machine learning algorithm. This choice is crucial, as the complex interplay of various environmental [...] Read more.
Gully erosion is a serious environmental threat, compromising soil health, damaging agricultural lands, and destroying vital infrastructure. Pinpointing regions prone to gully erosion demands careful selection of an appropriate machine learning algorithm. This choice is crucial, as the complex interplay of various environmental factors contributing to gully formation requires a nuanced analytical approach. To develop the most accurate Gully Erosion Susceptibility Map (GESM) for India’s Raiboni River basin, researchers harnessed the power of two cutting-edge machine learning algorithm: Extreme Gradient Boosting (XGBoost) and Random Forest (RF). For a comprehensive analysis, this study integrated 24 potential control factors. We meticulously investigated a dataset of 200 samples, ensuring an even balance between non-gullied and gullied locations. To assess multicollinearity among the 24 variables, we employed two techniques: the Information Gain Ratio (IGR) test and Variance Inflation Factors (VIF). Elevation, land use, river proximity, and rainfall most influenced the basin’s GESM. Rigorous tests validated XGBoost and RF model performance. XGBoost surpassed RF (ROC 86% vs. 83.1%). Quantile classification yielded a GESM with five levels: very high to very low. Our findings reveal that roughly 12% of the basin area is severely affected by gully erosion. These findings underscore the critical need for targeted interventions in these highly susceptible areas. Furthermore, our analysis of gully characteristics unveiled a predominance of V-shaped gullies, likely in an active developmental stage, supported by an average Shape Index (SI) value of 0.26 and a mean Erosivness Index (EI) of 0.33. This research demonstrates the potential of machine learning to pinpoint areas susceptible to gully erosion. By providing these valuable insights, policymakers can make informed decisions regarding sustainable land management practices. Full article
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<p>Study area. (<b>a</b>) Location of India, (<b>b</b>) location of West Bengal, (<b>c</b>) location of testing and training dataset in the Rainoni River basin.</p>
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<p>Workflow diagram of the present study.</p>
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<p>Distribution of twenty-four key factors used in this research: (<b>a</b>) elevation, (<b>b</b>) slope, (<b>c</b>) slope length, (<b>d</b>) slope aspect, (<b>e</b>) curvature, (<b>f</b>) drainage density, (<b>g</b>) distance from the river, (<b>h</b>) distance from lineament, (<b>i</b>) TWI, (<b>j</b>) distance from the road, (<b>k</b>) NDVI, (<b>l</b>) rainfall, (<b>m</b>) lithology, (<b>n</b>) geomorphology, (<b>o</b>) LULC, (<b>p</b>) soil organic density, (<b>q</b>) bulk density, (<b>r</b>) clay content, (<b>s</b>) coarse fragments, (<b>t</b>) sand, (<b>u</b>) silt, (<b>v</b>) carbon exchange capacity, (<b>w</b>) nitrogen, and (<b>x</b>) soil organic carbon.</p>
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<p>Parameters describing the cross-sectional morphology of the gully (note: width of the one-fourth depth (WQD), width of the half depth (WHD), total width (WT), depth of the half right side (DRH), depth of the half left side (DLH), average depth (D) (source: based on Deng et al. [<a href="#B42-sustainability-16-06569" class="html-bibr">42</a>]).</p>
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<p>Final gully erosion susceptibility maps using: (<b>a</b>) the RF and (<b>b</b>) XGBoost models.</p>
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<p>Evaluation of the accuracy of the XGBoost and RF models using ROC analysis.</p>
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<p>Photographs captured of the gullies during the subsequent field investigations: (<b>a</b>–<b>c</b>) during the gully geometrical parameters survey; (<b>d</b>,<b>e</b>) rock exposure areas caused by deforestation and human activity (REABDHA); (<b>f</b>) agriculture practices in the gully; and (<b>g</b>–<b>i</b>) fallow lands (FL).</p>
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<p>The gully-dominant area of the Raiboni River Basin and the selected gully for measuring geometric parameters.</p>
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30 pages, 2037 KiB  
Review
Quorum Sensing Inhibitors: An Alternative Strategy to Win the Battle against Multidrug-Resistant (MDR) Bacteria
by Helal F. Hetta, Yasmin N. Ramadan, Zainab I. Rashed, Ahmad A. Alharbi, Shomokh Alsharef, Tala T. Alkindy, Alanoud Alkhamali, Abdullah S. Albalawi, Basem Battah and Matthew G. Donadu
Molecules 2024, 29(15), 3466; https://doi.org/10.3390/molecules29153466 - 24 Jul 2024
Viewed by 881
Abstract
Antibiotic resistance is a major problem and a major global health concern. In total, there are 16 million deaths yearly from infectious diseases, and at least 65% of infectious diseases are caused by microbial communities that proliferate through the formation of biofilms. Antibiotic [...] Read more.
Antibiotic resistance is a major problem and a major global health concern. In total, there are 16 million deaths yearly from infectious diseases, and at least 65% of infectious diseases are caused by microbial communities that proliferate through the formation of biofilms. Antibiotic overuse has resulted in the evolution of multidrug-resistant (MDR) microbial strains. As a result, there is now much more interest in non-antibiotic therapies for bacterial infections. Among these revolutionary, non-traditional medications is quorum sensing inhibitors (QSIs). Bacterial cell-to-cell communication is known as quorum sensing (QS), and it is mediated by tiny diffusible signaling molecules known as autoinducers (AIs). QS is dependent on the density of the bacterial population. QS is used by Gram-negative and Gram-positive bacteria to control a wide range of processes; in both scenarios, QS entails the synthesis, identification, and reaction to signaling chemicals, also known as auto-inducers. Since the usual processes regulated by QS are the expression of virulence factors and the creation of biofilms, QS is being investigated as an alternative solution to antibiotic resistance. Consequently, the use of QS-inhibiting agents, such as QSIs and quorum quenching (QQ) enzymes, to interfere with QS seems like a good strategy to prevent bacterial infections. This review sheds light on QS inhibition strategy and mechanisms and discusses how using this approach can aid in winning the battle against resistant bacteria. Full article
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Figure 1
<p>QS mechanism in Gram-negative bacteria: based on the production of N-Acyl homoserine lactone (AHL) autoinducer from LuxI, which is then attached to the LuxR receptor to trigger the transcription of the target gene [<a href="#B69-molecules-29-03466" class="html-bibr">69</a>]. Created with BioRender.</p>
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<p>QS in Gram-positive bacteria: it involves the synthesis of autoinducer peptide (AIP) which is carried into the bacterial cell by the ABC transporter and binds to histidine sensor kinase segment; once activated, it auto-phosphorylates, and triggers targeted gene expression [<a href="#B69-molecules-29-03466" class="html-bibr">69</a>]. Created with BioRender.</p>
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<p>Auto-inducers’ enzymatic inactivation by the enzyme’s lactonase, acylase, and oxidoreductase. Created with BioRender.</p>
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<p>Schematic illustration of the possible ways by which NPs could obstruct the QS process. Created with BioRender.</p>
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<p>Diagram demonstrating the QSI-guided antibiotic delivery. Modified from [<a href="#B277-molecules-29-03466" class="html-bibr">277</a>]. Created with BioRender.</p>
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16 pages, 4250 KiB  
Article
Investigating the Endophyte Actinomycetota sp. JW0824 Strain as a Potential Bioinoculant to Enhance the Yield, Nutritive Value, and Chemical Composition of Different Cultivars of Anise (Pimpinella anisum L.) Seeds
by Ahmed M. Mahmoud, Ahmed M. Reyad, Maha H. Khalaf, Mohamed S. Sheteiwy, Mona F. A. Dawood, Ahmed M. El-Sawah, Enas Shaban Ahmed, Abdul Malik, Wahidah H. Al-Qahtani, Mostafa A. Abdel-Maksoud, Nermien H. S. Mousa, Mohammed Alyafei and Hamada AbdElgawad
Biology 2024, 13(8), 553; https://doi.org/10.3390/biology13080553 - 23 Jul 2024
Cited by 1 | Viewed by 666
Abstract
Anise (Pimpinella anisum L.) seeds have various nutritional and therapeutic benefits and are thus considered a valuable addition to animal and human health. Hence, in this study, we aimed to induce the nutritive and biological value of anise seeds. To this end, [...] Read more.
Anise (Pimpinella anisum L.) seeds have various nutritional and therapeutic benefits and are thus considered a valuable addition to animal and human health. Hence, in this study, we aimed to induce the nutritive and biological value of anise seeds. To this end, the potential biofortification effect of the endophytic Actinomycetota sp. JW0824 strain, isolated during the fall of 2023 from the medicinal plant Achyranthes aspera, exhibiting natural distribution in the Jazan region of Saudi Arabia, was investigated in four varieties of anise seeds from Egypt, Tunisia, Syria, and Morocco. Results revealed significant increments (p < 0.05) in the seed dry weight percentage (DW%) and oil yields. In line with increased biomass accumulation, the metabolism of the primary and secondary metabolites was increased. There were differential increases in proteins, sugars, flavonoids, alkaloids, phenols, vitamins (e.g., β-carotene, ascorbic acid), and essential oil components (e.g., phenylpropanoids and monoterpenes), along with their precursor phenylalanine. Consistently, the activity of L-phenylalanine aminolyase (PAL) was increased in the Egyptian and Tunisian varieties at 83.88% and 77.19%, respectively, while 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHPS) activity increased in all varieties, with a significant 179.31% rise in the Egyptian variety. These findings highlight the beneficial effects of Actinomycetota sp. JW0824 as a bioinoculant for anise seeds, suggesting its potential application in agricultural practices to improve seed yield and quality. Further field trials are recommended to assess the commercial viability of this endophyte for enhancing anise seed production and potentially benefiting other plant species. Full article
(This article belongs to the Section Microbiology)
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<p>Phylogenetic analysis of the endophytic <span class="html-italic">Actinomycetota</span> sp JW0824. The neighbor-joining method was utilized to construct the tree based on 16S rRNA sequences. The bootstrap values for each node were determined from 100 replicates. <span class="html-italic">Actinomadura hibisca</span> JCM 9627 and <span class="html-italic">Escherichia coli</span> were used as the outgroup for this analysis.</p>
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<p>Percentage of dry weight (<b>A</b>) and water content (<b>B</b>) in control and different <span class="html-italic">Actinomycetota</span>-treated aniseed varieties. Data are represented by the mean of at least three replicates ± standard error. Stars (** <span class="html-italic">p</span> ≤ 0.01, *** <span class="html-italic">p</span> ≤ 0.001) above columns refer to significant differences between controls and treated seeds at <span class="html-italic">p</span> &lt; 0.05. ns &gt; 0.05 (non-significant effect).</p>
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<p>Primary and secondary metabolites in control and <span class="html-italic">Actinomycetota</span>-treated aniseed varieties; <b>A</b> = Saponin, <b>B</b> = steroid, <b>C</b> = total protein, <b>D</b> = total sugar, <b>E</b> = ash, <b>F</b> = crude fiber, <b>G</b> = total phenols, <b>H</b> = total falvonoids, <b>I</b> = total alkaloids, and <b>J</b> = tanins. Data are represented by the mean of at least three replicates ± standard error. Stars (*) above columns indicate significant differences between the control and the bacteria-treated samples at <span class="html-italic">p</span> &lt; 0.05. * <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, *** <span class="html-italic">p</span> ≤ 0.001, and **** <span class="html-italic">p</span> ≤ 0.0001. ns &gt; 0.05 (non-significant effect).</p>
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<p>Vitamins in control and <span class="html-italic">Actinomycetota</span>-treated aniseed varieties. (<b>A</b>) tocopherol, (<b>B</b>) β-carotene, (<b>C</b>) thiamine and (<b>D</b>) ascorbic acid. Data are represented by the means of at least three replicates ± standard error. Stars (*) above columns indicate significant differences between the control and the bacteria-treated samples at <span class="html-italic">p</span> &lt; 0.05. * <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, *** <span class="html-italic">p</span> ≤ 0.001, **** <span class="html-italic">p</span> ≤ 0.0001. ns &gt; 0.05 (non-significant effect).</p>
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<p>The total oil yield (<b>A</b>) and essential oil percentage (<b>B</b>) in the control and <span class="html-italic">Actinomycetota</span>-treated aniseed varieties. Data are represented by the mean of at least three replicates ± standard error. Stars (*) above columns indicate significant differences between the control and the bacteria-treated samples; * <span class="html-italic">p</span> ≤ 0.05 and ** <span class="html-italic">p</span> ≤ 0.01. ns &gt; 0.05 (non-significant effect).</p>
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<p>Essential oil-related precursors and related enzyme activities in the control and <span class="html-italic">Actinomycetota</span>-treated aniseed varieties; <b>A</b> = L-phenylalanine aminolyase, <b>B</b> = cinnamic acid, <b>C</b> = shikimic acid, and <b>D</b> = o-methyltransferase. Data are represented by the mean of at least three replicates ± standard error. Stars (*) above columns indicate significant differences between the control and the bacteria-treated samples; * <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, *** <span class="html-italic">p</span> ≤ 0.001, and **** <span class="html-italic">p</span> ≤ 0.0001. ns &gt; 0.05 (non-significant effect).</p>
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