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18 pages, 3928 KiB  
Article
Prejudices May Be Wrong: Exploring Spatial Patterns of Vulnerability to Energy Poverty in Italian Metropolitan Areas
by Linda Zardo, Chiara Cortinovis and Giulia Lucertini
Sustainability 2024, 16(20), 8975; https://doi.org/10.3390/su16208975 (registering DOI) - 17 Oct 2024
Abstract
Energy poverty has impressive negative effects on people’s health. Alleviating energy poverty is crucial for a just and equitable transition. However, policies and attempts to reduce energy poverty present a challenge to researchers and policymakers due to its complexity. The lack of a [...] Read more.
Energy poverty has impressive negative effects on people’s health. Alleviating energy poverty is crucial for a just and equitable transition. However, policies and attempts to reduce energy poverty present a challenge to researchers and policymakers due to its complexity. The lack of a clear definition, of a common set of metrics to assess its multiple dimensions, and of spatially explicit assessments represent serious shortcomings that hinder effective policy design. This paper aims to explore the relevance and spatial distribution of the determinants of vulnerability to energy poverty to support the design of effective responses at different scales. To this end, a principal component (PCA) and a geographically weighted principal component analysis (GWPCA) are conducted on more than 1300 municipalities in 15 Italian metropolitan areas, to identify the spatial patterns of vulnerability to energy poverty and its causes. The PCA highlights three main components of vulnerability to energy poverty in the study areas, respectively, related to the job condition and to individual and households’ socioeconomic factors, which provide relevant insights for policies at the national level, The GWPCA provides more detailed information to effectively support policies at the local level. The novelty of this work is the comparison of results from a PCA and a GWPCA of their different contributions to policy design at different scales. Full article
(This article belongs to the Section Energy Sustainability)
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Figure 1

Figure 1
<p>Correlation plot of the analyzed factors considering the whole sample (1346 municipalities included in Italian metropolitan areas).</p>
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<p>Loading of the analyzed factors on the three components retained in the global PCA.</p>
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<p>Component 1: Unemployed, homemakers, students, and large families (+) and degree day and surface per inhabitants (–). Blue indicates areas of relatively strong vulnerability using positive loadings of indicators, and red indicates areas of strong vulnerability according to negative loadings of indicators.</p>
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<p>Component 2: Small children, foreigner, and autonomous heating (+) and elderly, no heating, and low income (–). Blue indicates areas of relatively strong vulnerability using positive loadings of indicators, and red indicates areas of strong vulnerability according to negative loadings of indicator.</p>
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<p>Component 3: Lone-parent household and rented property (–). Blue indicates areas of relatively strong vulnerability using positive loadings of indicators, and red indicates areas of strong vulnerability according to negative loadings of indicators.</p>
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<p>Lead factor of component 1 of the geographically weighted principal component analysis applied to all municipalities within Italian metropolitan areas.</p>
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13 pages, 1671 KiB  
Article
Inhibition Performance and Mechanism of Poly(Citric Acid–Glutamic Acid) on Carbon Steel Corrosion in Simulated Seawater
by Nanxin Chang, Kuaiying Liu, Yuzeng Zhao, Yining Deng and Honghua Ge
Appl. Sci. 2024, 14(20), 9465; https://doi.org/10.3390/app14209465 (registering DOI) - 16 Oct 2024
Abstract
In this investigation, the efficacy of PCA-GLU, a polymer obtained by copolymerizing citric acid and glutamic acid, as a corrosion inhibitor for carbon steel was investigated in a 3.5wt% NaCl solution. Electrochemical impedance spectroscopy (EIS) techniques and potentiodynamic polarization (PDP) measurements were used [...] Read more.
In this investigation, the efficacy of PCA-GLU, a polymer obtained by copolymerizing citric acid and glutamic acid, as a corrosion inhibitor for carbon steel was investigated in a 3.5wt% NaCl solution. Electrochemical impedance spectroscopy (EIS) techniques and potentiodynamic polarization (PDP) measurements were used to evaluate the corrosion inhibition. The findings demonstrate that PCA-GLU has a 96.73% corrosion inhibition efficiency. Additionally, when the inhibitor concentration rises, the corrosion inhibition efficiency rises as well, reaching an ideal concentration of 400 mg/L. Furthermore, PCA-GLU can create an adsorption layer on the surface of Q235. This paper verifies the adsorption mechanism of PCA-GLU through molecular dynamics simulations of the system and quantum chemical calculations of corrosion inhibitors in solution. Ultimately, our research findings validate that PCA-GLU is an efficient corrosion inhibitor in safeguarding carbon steel against corrosion in marine environments. Full article
21 pages, 1158 KiB  
Article
Fault Diagnosis Method for Hydropower Units Based on Dynamic Mode Decomposition and the Hiking Optimization Algorithm–Extreme Learning Machine
by Dan Lin, Yan Wang, Hua Xin, Xiaoyan Li, Shaofei Xu, Wei Zhou and Hui Li
Energies 2024, 17(20), 5159; https://doi.org/10.3390/en17205159 - 16 Oct 2024
Abstract
The diagnosis of vibration faults in hydropower units is essential for ensuring the safe and stable operation of these systems. This paper proposes a fault diagnosis method for hydropower units that combines Dynamic Mode Decomposition (DMD) with an optimized Extreme Learning Machine (ELM) [...] Read more.
The diagnosis of vibration faults in hydropower units is essential for ensuring the safe and stable operation of these systems. This paper proposes a fault diagnosis method for hydropower units that combines Dynamic Mode Decomposition (DMD) with an optimized Extreme Learning Machine (ELM) utilizing the Hiking Optimization Algorithm (HOA). To address the issue of noise interference in the vibration signals of hydropower units, this study employs DMD technology alongside a thresholding technique for noise reduction, demonstrating its effectiveness through comparative trials. Furthermore, to facilitate a thorough analysis of the operational status of hydropower units, this paper extracts multidimensional features from denoised signals. To improve the efficiency of model training, Principal Component Analysis (PCA) is applied to streamline the data. Given that the weights and biases of the ELM are generated randomly, which may impact the model’s stability and generalization capabilities, the HOA is introduced for optimization. The HOA-ELM model achieved a classification accuracy of 95.83%. A comparative analysis with alternative models substantiates the superior performance of the HOA-ELM model in the fault diagnosis of hydropower units. Full article
(This article belongs to the Section F3: Power Electronics)
13 pages, 1153 KiB  
Article
Quantitative Multi-Parametric MRI of the Prostate Reveals Racial Differences
by Aritrick Chatterjee, Xiaobing Fan, Jessica Slear, Gregory Asare, Ambereen N. Yousuf, Milica Medved, Tatjana Antic, Scott Eggener, Gregory S. Karczmar and Aytekin Oto
Cancers 2024, 16(20), 3499; https://doi.org/10.3390/cancers16203499 - 16 Oct 2024
Abstract
Purpose: This study investigates whether quantitative MRI and histology of the prostate reveal differences between races, specifically African Americans (AAs) and Caucasian Americans (CAs), that can affect diagnosis. Materials and Methods: Patients (98 CAs, 47 AAs) with known or suspected prostate cancer (PCa) [...] Read more.
Purpose: This study investigates whether quantitative MRI and histology of the prostate reveal differences between races, specifically African Americans (AAs) and Caucasian Americans (CAs), that can affect diagnosis. Materials and Methods: Patients (98 CAs, 47 AAs) with known or suspected prostate cancer (PCa) underwent 3T MRI (T2W, DWI, and DCE-MRI) prior to biopsy or prostatectomy. Quantitative mpMRI metrics: ADC, T2, and DCE empirical mathematical model parameters were calculated. Results: AAs had a greater percentage of higher Gleason-grade lesions compared to CAs. There were no significant differences in the quantitative ADC and T2 values between AAs and CAs. The cancer signal enhancement rate (α) on DCE-MRI was significantly higher for AAs compared to CAs (AAs: 13.3 ± 9.3 vs. CAs: 6.1 ± 4.7 s−1, p < 0.001). The DCE signal washout rate (β) was significantly lower in benign tissue of AAs (AAs: 0.01 ± 0.09 s−1 vs. CAs: 0.07 ± 0.07 s−1, p < 0.001) and significantly elevated in cancer tissue in AAs (AAs: 0.12 ± 0.07 s−1 vs. CAs: 0.07 ± 0.08 s−1, p = 0.02). DCE significantly improves the differentiation of PCa from benign in AAs (α: 52%, β: 62% more effective in AAs compared to CAs). Histologic analysis showed cancers have a greater proportion (p = 0.04) of epithelium (50.9 ± 12.3 vs. 44.7 ± 12.8%) and lower lumen (10.5 ± 6.9 vs. 16.2 ± 6.8%) in CAs compared to AAs. Conclusions: This study shows that AAs have different quantitative DCE-MRI values for benign prostate and prostate cancer and different histologic makeup in PCa compared to CAs. Quantitative DCE-MRI can significantly improve the performance of MRI for PCa diagnosis in African Americans but is much less effective for Caucasian Americans. Full article
(This article belongs to the Special Issue MRI in Prostate Cancer)
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Figure 1
<p>52-year-old African American patient with Gleason 4 + 3 cancer in the left apex in the peripheral zone (red arrows on MRI). The lesion is seen as a hypo-intense region on the T2W image, T2 (87.9 ± 16.4 ms), and mildly hypo-intense on ADC (1.32 ± 0.20 µm<sup>2</sup>/ms) maps with early focal enhancement on DCE-MRI, evidenced by high signal enhancement rate (19.3 s<sup>−1</sup>) and rapid washout rate (0.07 s<sup>−1</sup>). Surrounding benign tissue in the peripheral zone had ADC = 2.05 ± 0.10 µm<sup>2</sup>/ms, T2 = 308.9 ± 62.6 ms, α = 2.87 s<sup>−1</sup>, and β = 0.04 s<sup>−1</sup>. Another relevant finding is the presence of Gleason 3 + 3 cancers in the right apex. Cancers are outlined in blue on histology sections.</p>
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<p>52-year-old Caucasian American patient with Gleason 3 + 4 cancer in the right apex in the peripheral zone (red arrows on mpMRI). The lesion is seen as a hypo-intense region on the T2W image, T2 (112.4 ± 54.6 ms), and mildly hypo-intense on ADC (0.86 ± 0.12 µm<sup>2</sup>/ms) maps with only diffuse early enhancement on DCE-MRI, evidenced by low signal enhancement rate (3.50 s<sup>−1</sup>) and washout rate (0.03 s<sup>−1</sup>). Surrounding benign tissue in the peripheral zone had ADC = 1.16 ± 0.19 µm<sup>2</sup>/ms, T2 = 125.1 ± 34.5 ms, α = 3.20 s<sup>−1</sup>, and β = 0.01 s<sup>−1</sup>. Cancers are outlined in blue on histology sections.</p>
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17 pages, 5606 KiB  
Article
Combining Physiology and Transcriptome Data Screening for Key Genes in Actinidia arguta Response to Waterlogging Stress
by Jiaqi Geng, Guangli Shi, Xiang Li, Yumeng Liu, Wenqi An, Dan Sun, Zhenxing Wang and Jun Ai
Agronomy 2024, 14(10), 2391; https://doi.org/10.3390/agronomy14102391 - 16 Oct 2024
Abstract
Actinidia arguta is a cold-resistant fruit tree but intolerant to waterlogging. Waterlogging stress is the major abiotic stress in A. arguta growth, and several pathways are involved in the response mechanisms. Fifteen physiological indices and transcriptome data of two A. arguta cultivars, which [...] Read more.
Actinidia arguta is a cold-resistant fruit tree but intolerant to waterlogging. Waterlogging stress is the major abiotic stress in A. arguta growth, and several pathways are involved in the response mechanisms. Fifteen physiological indices and transcriptome data of two A. arguta cultivars, which showed two forms under waterlogging, were used to identify the major factor following the leaf senescence in waterlogging. Through principal component analysis (PCA) of 15 physiological indices in ‘Kuilv’ and ‘Lvwang’, the hormone contents were selected as the most important principal component (PCA 2) out of four components in response to waterlogging stress. According to the analysis of transcriptome data, 21,750 differentially expressed genes were identified and 10 genes through WGCNA, including hormone metabolism and sucrose metabolism, were screened out on the 6th day of waterlogging. In particular, the ABA signal transduction pathway was found to be closely related to the response to waterlogging based on the correlation analysis between gene expression level and plant hormone content, which may have regulated physiological indicators and morphological changes together with other hormones. Overall, the phenomenon of leaves falling induced by ABA might be a protective mechanism. The results provided more insights into the response mechanism of coping with waterlogging stress in A. arguta. Full article
(This article belongs to the Section Water Use and Irrigation)
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<p>Morphological changes in ‘Kuilv’ and ‘Lvwang’ under different numbers of waterlogged days. (<b>a</b>) Photos of ‘Kuilv’ waterlogging for 0, 3, 6, 9, and 12 days. (<b>b</b>) Photos of ‘Lvwang’ waterlogging for 0, 3, 6, 9, and 12 days.</p>
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<p>PCA cluster analysis of PCA 1 and PCA 2 to show the changes in main indicators.</p>
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<p>Changes in hormones content of different varieties under waterlogging. (<b>a</b>) Content of GA<sub>3.</sub> (<b>b</b>) Content of IAA. (<b>c</b>) Content of ABA. (<b>d</b>) GA<sub>3</sub>+IAA/ABA ratio of content. K and L represent the treatment of ‘Kuilv’ and ‘Lvwang’, respectively. Mean values followed by the same letter within a colum do not deffer significantly according to analysis of variance at <span class="html-italic">p</span> ≤ 0.05.</p>
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<p>Comparison of NR database.</p>
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<p>DEG number statistics and Venn diagram between different waterlogging days. (<b>a</b>) DEG number. (<b>b</b>) Venn diagram.</p>
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<p>GO enrichment barplot (<b>a</b>) and KEGG enrichment scatterplot. (<b>b</b>) of the waterlogging-responsive DEGs in ‘Lvwang’ and ‘Kuilv’.</p>
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<p>Co-expression network visualization results. (<b>a</b>) The visualization of gene modules, the same color means that these genes correspond to the same module; (<b>b</b>) module and associated biological characteristics. (<b>c</b>) Co-expression network of genes in the MEblue module.The color of yellow represent the interaction frequency.</p>
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<p>Gene-expression-related plant hormone signal pathway pattern under waterlogging.</p>
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<p>Gene-expression-related starch and sucrose metabolism pathway pattern under waterlogging.</p>
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<p>Log 2 fold changes of ten genes in quantitative real-time PCR (qRT-PCR) and RNA-seq.</p>
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<p>A schematic model of transcriptional regulation in <span class="html-italic">A. arguta</span> in response to waterlogging. Red and blue text indicate up- and down-regulated genes.</p>
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18 pages, 4232 KiB  
Article
Sustainable Innovations in Oat-Based Yogurts: Modulating Quality and Sensory Properties with Chia Seeds and Honey
by Simona Petrevska, Biljana Trajkovska, Gjore Nakov, Zlatin Zlatev, Violeta Raykova and Nastia Ivanova
Sustainability 2024, 16(20), 8944; https://doi.org/10.3390/su16208944 - 16 Oct 2024
Abstract
This study investigates the impact of adding varying concentrations (1%, 3%, 5%, 7%, and 9%) of chia seeds on the physicochemical and antioxidant properties of oat-based yogurt fortified with 2% honey. The research analyzed changes in pH, titratable acidity, water-holding capacity (WHC), dry [...] Read more.
This study investigates the impact of adding varying concentrations (1%, 3%, 5%, 7%, and 9%) of chia seeds on the physicochemical and antioxidant properties of oat-based yogurt fortified with 2% honey. The research analyzed changes in pH, titratable acidity, water-holding capacity (WHC), dry matter content, total phenolic content (TPC), and antioxidant activity over a 7-day storage period. The pH values ranged from 4.33 ± 0.01 to 4.57 ± 0.01, with no significant impact observed due to chia seed addition. Titratable acidity increased most rapidly in the 9% chia seed sample, particularly between days 5 and 7. WHC significantly improved with higher chia seed concentrations, with the 9% chia sample reaching 99.9 ± 0.07% compared with 69.9 ± 0.12% in the control. Dry matter content showed a similar trend, with the highest increase observed in the 9% chia sample. TPC and antioxidant activity were positively correlated with chia seed concentration and storage time, with the 9% chia sample exhibiting the highest values on day 7. Sensory evaluation revealed that the 3% chia seed concentration was most preferred by panelists for its balanced texture and flavor. Principal Component Analysis (PCA) highlighted the clustering of higher chia concentrations with improved functional properties. This study presents novel insights into the impact of varying concentrations of chia seeds on the physicochemical properties and antioxidant potential of oat-based yogurt, specifically fortified with honey, contributing to the development of functional plant-based dairy alternatives. Full article
(This article belongs to the Special Issue Food Science and Technology and Sustainable Food Products)
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Figure 1
<p>Changes in pH values over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Titratable acidity over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Water-holding capacity (WHC %) over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Dry matter (%) over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Total phenolic content over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Antioxidant activity over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>Concentration of diacetyl over the course of storage days of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds). Small letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between samples with different quantities of chia seeds; capital letters refer to statistically significant differences (<span class="html-italic">p</span> &lt; 0.05) between storage days.</p>
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<p>(<b>a</b>,<b>b</b>). Sensory scores of oat-based yogurts with different percentages of chia seeds. Control (plain oat-based yogurt with 2% honey); 1% chia (plain oat-based yogurt with 2% honey and 1% chia seeds); 3% chia (plain oat-based yogurt with 2% honey and 3% chia seeds); 5% chia (plain oat-based yogurt with 2% honey and 5% chia seeds); 7% chia (plain oat-based yogurt with 2% honey and 7% chia seeds); 9% chia (plain oat-based yogurt with 2% honey and 9% chia seeds).</p>
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<p>Results from feature selection.</p>
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<p>Results from PCA.</p>
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<p>Determination of appropriate amount of chia in oats yogurt.</p>
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25 pages, 39533 KiB  
Article
Identification of High-Photosynthetic-Efficiency Wheat Varieties Based on Multi-Source Remote Sensing from UAVs
by Weiyi Feng, Yubin Lan, Hongjian Zhao, Zhicheng Tang, Wenyu Peng, Hailong Che and Junke Zhu
Agronomy 2024, 14(10), 2389; https://doi.org/10.3390/agronomy14102389 (registering DOI) - 16 Oct 2024
Abstract
Breeding high-photosynthetic-efficiency wheat varieties is a crucial link in safeguarding national food security. Traditional identification methods necessitate laborious on-site observation and measurement, consuming time and effort. Leveraging unmanned aerial vehicle (UAV) remote sensing technology to forecast photosynthetic indices opens up the potential for [...] Read more.
Breeding high-photosynthetic-efficiency wheat varieties is a crucial link in safeguarding national food security. Traditional identification methods necessitate laborious on-site observation and measurement, consuming time and effort. Leveraging unmanned aerial vehicle (UAV) remote sensing technology to forecast photosynthetic indices opens up the potential for swiftly discerning high-photosynthetic-efficiency wheat varieties. The objective of this research is to develop a multi-stage predictive model encompassing nine photosynthetic indicators at the field scale for wheat breeding. These indices include soil and plant analyzer development (SPAD), leaf area index (LAI), net photosynthetic rate (Pn), transpiration rate (Tr), intercellular CO2 concentration (Ci), stomatal conductance (Gsw), photochemical quantum efficiency (PhiPS2), PSII reaction center excitation energy capture efficiency (Fv’/Fm’), and photochemical quenching coefficient (qP). The ultimate goal is to differentiate high-photosynthetic-efficiency wheat varieties through model-based predictions. This research gathered red, green, and blue spectrum (RGB) and multispectral (MS) images of eleven wheat varieties at the stages of jointing, heading, flowering, and filling. Vegetation indices (VIs) and texture features (TFs) were extracted as input variables. Three machine learning regression models (Support Vector Machine Regression (SVR), Random Forest (RF), and BP Neural Network (BPNN)) were employed to construct predictive models for nine photosynthetic indices across multiple growth stages. Furthermore, the research conducted principal component analysis (PCA) and membership function analysis on the predicted values of the optimal models for each indicator, established a comprehensive evaluation index for high photosynthetic efficiency, and employed cluster analysis to screen the test materials. The cluster analysis categorized the eleven varieties into three groups, with SH06144 and Yannong 188 demonstrating higher photosynthetic efficiency. The moderately efficient group comprises Liangxing 19, SH05604, SH06085, Chaomai 777, SH05292, Jimai 22, and Guigu 820, totaling seven varieties. Xinmai 916 and Jinong 114 fall into the category of lower photosynthetic efficiency, aligning closely with the results of the clustering analysis based on actual measurements. The findings suggest that employing UAV-based multi-source remote sensing technology to identify wheat varieties with high photosynthetic efficiency is feasible. The study results provide a theoretical basis for winter wheat phenotypic monitoring at the breeding field scale using UAV-based multi-source remote sensing, offering valuable insights for the advancement of smart breeding practices for high-photosynthetic-efficiency wheat varieties. Full article
(This article belongs to the Section Precision and Digital Agriculture)
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<p>Geographical Location of the Research Area and Distribution of Experimental Materials.</p>
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<p>(<b>a</b>) Exclusion of soil background; (<b>b</b>) delineation of the ROI.</p>
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<p>Extracting TFs through GLCMs.</p>
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<p>The flowchart of the experiment.</p>
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<p>Correlation analysis between UAV imagery features and photosynthetic indices during the filling period.</p>
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<p>Training and validation of the optimal predictive model for the nine photosynthetic indices during the filling stage: (<b>a</b>) SPAD; (<b>b</b>) LAI; (<b>c</b>) Pn; (<b>d</b>) Tr; (<b>e</b>) Ci; (<b>f</b>) Gsw; (<b>g</b>) PhiPS2; (<b>h</b>) Fv’/Fm’; (<b>i</b>) qP. The blue and red shaded areas represent the 95% confidence bands of the training set and the verification set, respectively.</p>
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<p>Predicted value cluster analysis and measured value cluster analysis of 11 varieties. (<b>a</b>) Clustering analysis is based on the predicted values; (<b>b</b>) Clustering analysis is based on the measured values.</p>
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<p>The variation trend of photosynthetic indices in four key growth periods. WV1, WV2, WV3, and so forth represent the varieties SH05604, SH06144, Guigu 820, Jimai 22, Yannong 188, Xinmai 916, Liangxing 19 Jinong 114, Chaomai 777, SH05292 and SH06085. (<b>a</b>) SPAD; (<b>b</b>) LAI; (<b>c</b>) Pn; (<b>d</b>) Tr; (<b>e</b>) Ci; (<b>f</b>) Gsw; (<b>g</b>) PhiPS2; (<b>h</b>) Fv’/Fm’; (<b>i</b>) qP.</p>
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<p>Performance of different machine learning algorithms in the prediction of different photosynthetic indexes.</p>
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<p>Correlation analysis between UAV imagery features and photosynthetic indices in three key growth stages: (<b>a</b>) Jointing period, (<b>b</b>) Heading period, and (<b>c</b>) Flowering period.</p>
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<p>Correlation analysis between UAV imagery features and photosynthetic indices in three key growth stages: (<b>a</b>) Jointing period, (<b>b</b>) Heading period, and (<b>c</b>) Flowering period.</p>
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8 pages, 494 KiB  
Article
Role of Liquid Biopsy in Progressive PSA Patients after Radical Prostatectomy
by Marcel Figueras, Lourdes Mengual, Mercedes Ingelmo-Torres, Fiorella L. Roldán, Bernat Padullés, Héctor Alfambra, Sandra Herranz, Pilar Paredes, Gary Amseian, Joel Mases, Maria J. Ribal, Laura Izquierdo and Antonio Alcaraz
Diagnostics 2024, 14(20), 2293; https://doi.org/10.3390/diagnostics14202293 (registering DOI) - 16 Oct 2024
Viewed by 103
Abstract
Background/Objectives: Currently, the prediction of disease recurrence after radical prostatectomy (RP) in localized prostate cancer (PCa) relies on clinicopathological parameters, which lack accuracy in predicting clinical outcomes. This study focused on evaluating the utility of cfDNA levels and fragmentation patterns as prognostic biomarkers [...] Read more.
Background/Objectives: Currently, the prediction of disease recurrence after radical prostatectomy (RP) in localized prostate cancer (PCa) relies on clinicopathological parameters, which lack accuracy in predicting clinical outcomes. This study focused on evaluating the utility of cfDNA levels and fragmentation patterns as prognostic biomarkers in progressive prostate-specific antigen (PSA) patients, including those with persistent PSA and biochemical recurrence (BR), after primary treatment in localized PCa patients. Methods: Twenty-nine high-risk localized PCa patients were enrolled in the study between February 2022 and May 2023. Blood samples were obtained before robotic RP. cfDNA concentration and fragment size were quantified using the Quant-it PicoGreen dsDNA Assay kit and Agilent 2200 TapeStation System, respectively. Results: The mean PSA value at diagnosis was 9.4 ng/mL. Seven patients (24.1%) had stage pT2 and 22 (75.9%) pT3. Nine patients (31%) had detectable PSA at the first PSA control six weeks after surgery, and four patients (20%) had BR during a mean follow-up of 18.4 months. No associations were found between cfDNA levels or fragmentation patterns and clinicopathological data. Although not statistically significant, patients with detectable PSA levels post-surgery exhibited higher cfDNA levels and shorter fragments compared with those with undetectable PSA. Conclusions: Our study indicated a tendency toward more fragmented cfDNA levels in PCa patients with persistent PSA. Strikingly, biochemical recurrent PCa patients exhibited similar cfDNA levels and fragmentation patterns compared to non-recurrent patients. Further studies exploring liquid biopsy-derived biomarkers in localized PCa patients are needed to elucidate their clinical utility in predicting PSA persistence. Full article
(This article belongs to the Special Issue Urologic Oncology: Biomarkers, Diagnosis, and Management)
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<p>Box plots describing (<b>A</b>) cfDNA levels and (<b>B</b>) mean fragmentation patterns for PC patients with PSA detectable after surgery.</p>
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21 pages, 949 KiB  
Review
Prognostic Role of PSMA-Targeted Imaging in Metastatic Castration-Resistant Prostate Cancer: An Overview
by Matteo Caracciolo, Angelo Castello, Massimo Castellani, Mirco Bartolomei and Egesta Lopci
Biomedicines 2024, 12(10), 2355; https://doi.org/10.3390/biomedicines12102355 (registering DOI) - 16 Oct 2024
Viewed by 134
Abstract
Objectives: Prostate-specific membrane antigen (PSMA) positron emission tomography/computed tomography (PET/CT) has gained a primary role in prostate cancer (PCa) imaging, overcoming conventional imaging and prostate-specific antigen (PSA) serum levels, and has recently emerged as a promising technique for monitoring therapy response in metastatic [...] Read more.
Objectives: Prostate-specific membrane antigen (PSMA) positron emission tomography/computed tomography (PET/CT) has gained a primary role in prostate cancer (PCa) imaging, overcoming conventional imaging and prostate-specific antigen (PSA) serum levels, and has recently emerged as a promising technique for monitoring therapy response in metastatic castration-resistant prostate cancer (mCRPC) patients treated with novel hormonal therapy, taxanes, and radioligand therapy (RLT). In this review, we aim to provide an overview of the most relevant aspects under study and future prospects related to the prognostic role of PSMA PET/CT in mCRPC. Methods: A systematic literature search was performed in the following databases: MEDLINE, PubMed, and EMBASE databases. The study focused exclusively on English-language studies, excluding papers not pertinent to the topic. Results: PSMA PET imaging offers a higher sensitivity and specificity than conventional imaging and provides accurate staging and efficient diagnosis of distant metastases. The data presented herein highlight the usefulness of PET in risk stratification, with a prognostic potential that can have a significant impact on clinical practice. Several prospective trials are ongoing and will shortly provide more evidence supporting the prognostic potential of PET PSMA data in this clinical scenario. Conclusions: Current evidence proves the prognostic role of PSMA PET/CT in different settings, with raising relevance also in the context of mCRPC. Full article
(This article belongs to the Section Cancer Biology and Oncology)
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<p>In the present multipanel image, we provide the correlation between PSMA tumor volume (PSMA-TV) expressed in quartiles and overall survival, expressed in months (mo.). Panel (<b>a</b>) depicts the boxplots of the PSMA-TV measured in <span class="html-italic">ml</span> and the corresponding quartiles 1 to 4. Panel (<b>b</b>) provides separate overall survival curves related to each PSMA-TV quartile. Panels (<b>c</b>–<b>f</b>) provide some exemplary patients corresponding to the different quartiles together with blood levels of prostate-specific antigen (PSA). Reproduced from Seifert, R et al. [<a href="#B37-biomedicines-12-02355" class="html-bibr">37</a>], published under a Creative Commons Attribution 4.0 International License. To view a copy of this license, visit: <a href="http://creativecommons.org/licenses/by/4.0/" target="_blank">http://creativecommons.org/licenses/by/4.0/</a> (accessed on 19 September 2024).</p>
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14 pages, 4545 KiB  
Article
Prediction of Environmentally Suitable Areas for Zephyranthes (Amaryllidaceae) in Mexico
by Zayner Edin Rodríguez Flores, Yanet Moredia Rosete, Jesús Alejandro Ruiz Valencia and Yolanda Leticia Fernández Pavía
Ecologies 2024, 5(4), 571-584; https://doi.org/10.3390/ecologies5040034 (registering DOI) - 16 Oct 2024
Viewed by 234
Abstract
The genus Zephyranthes is widely represented in Mexico, with 37 species of ornamental and medical importance. However, basic aspects of the genus, such as the environmental variables that determine its presence in certain sites, have not yet been addressed, which limits the knowledge [...] Read more.
The genus Zephyranthes is widely represented in Mexico, with 37 species of ornamental and medical importance. However, basic aspects of the genus, such as the environmental variables that determine its presence in certain sites, have not yet been addressed, which limits the knowledge of its ecology, potential applications and possible conservation strategies. Potential distribution models were generated with data on the presence of 13 species of the genus Zephyranthes, using 28 bioclimatic and edaphic variables with the maximum entropy method (Maxent). Of these variables, the most important and least correlated for each species were chosen by principal component analysis (PCA); the occurrence data were obtained from digital platforms and filtered to reduce spatial autocorrelation. The resulting models, had AUC values > 0.90 and Kappa index values > 0.6, in addition to being significant according to the results of the binomial test applied (p < 0.05). Maximum temperatures and humidity, as well as annual precipitation, are relevant environmental variables for the niche models. Most species are distributed in the biogeographic province of the Transmexican Volcanic Belt. Zephyranthes concolor and Zephyranthes lindleyana were the species with the largest potential range. The species with the most restricted potential distribution were Zephyranthes citrina and Zephyranthes sessilis. The most determinant variables for species with neotropical affinity are different from those identified for Nearctic species, reflecting niche differentiation, congruent with the evolutionary history of Zephyranthes. Full article
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<p>Known and potential geographic distribution of the genus <span class="html-italic">Zephyranthes</span> in Mexico. (<b>a</b>) Occurrence records and biogeographic regions proposed by Morrone [<a href="#B66-ecologies-05-00034" class="html-bibr">66</a>]. (<b>b</b>) Potential distribution, created with 1376 occurrence records of 13 species of the genus. The range of colors shows habitat suitability.</p>
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<p>Potential distribution of four species of the genus <span class="html-italic">Zephyranthes</span>. (<b>a</b>) <span class="html-italic">Z. brevipes</span>, (<b>b</b>) <span class="html-italic">Z. carinata</span>, (<b>c</b>) <span class="html-italic">Z. chichimeca</span>, (<b>d</b>) <span class="html-italic">Z. chlorosolen</span>.</p>
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<p>Potential distribution of four species of the genus <span class="html-italic">Zephyranthes</span>. (<b>a</b>) <span class="html-italic">Z. citrina</span>, (<b>b</b>) <span class="html-italic">Z. concolor</span>, (<b>c</b>) <span class="html-italic">Z. drummondii</span>, (<b>d</b>) <span class="html-italic">Z. fosteri</span>.</p>
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<p>Potential distribution of five species of the genus <span class="html-italic">Zephyranthes</span>. (<b>a</b>) <span class="html-italic">Z. lindleyana</span>, (<b>b</b>) <span class="html-italic">Z. longifolia</span>, (<b>c</b>) <span class="html-italic">Z. minuta</span>, (<b>d</b>) <span class="html-italic">Z. morrisclintii</span>, (<b>e</b>) <span class="html-italic">Z. sessilis</span>.</p>
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11 pages, 1224 KiB  
Article
Magnetic Resonance Elastography for the Detection and Classification of Prostate Cancer
by Seung Ho Kim, Joo Yeon Kim and Moon Jung Hwang
Cancers 2024, 16(20), 3494; https://doi.org/10.3390/cancers16203494 (registering DOI) - 15 Oct 2024
Viewed by 220
Abstract
We investigated the feasibility of magnetic resonance elastography (MRE) using a pelvic acoustic driver for the detection and classification of prostate cancer (PCa). A total of 75 consecutive patients (mean age, 70; range, 56–86) suspected of having PCa and who underwent multi-parametric MRI [...] Read more.
We investigated the feasibility of magnetic resonance elastography (MRE) using a pelvic acoustic driver for the detection and classification of prostate cancer (PCa). A total of 75 consecutive patients (mean age, 70; range, 56–86) suspected of having PCa and who underwent multi-parametric MRI including MRE and subsequent surgical resection were included. The analyzed regions consisted of cancer (n = 69), benign prostatic hyperplasia (BPH) (n = 70), and normal parenchyma (n = 70). A histopathologic topographic map served as the reference standard for each region. One radiologist and one pathologist performed radiologic–pathologic correlation, and the radiologist measured stiffness values in each region of interest on elastograms automatically generated by dedicated software. Paired t-tests were used to compare stiffness values between two regions. ROC curve analysis was also used to extract a cutoff value between two regions. The stiffness value of PCa (unit, kilopascal (kPa); 4.9 ± 1.1) was significantly different to that of normal parenchyma (3.6 ± 0.3, p < 0.0001) and BPH (4.5 ± 1.4, p = 0.0454). Under a cutoff value of 4.2 kPa, a maximum accuracy of 87% was estimated, with a sensitivity of 73%, a specificity of 99%, and an AUC of 0.839 for discriminating PCa from normal parenchyma. Between PCa and BPH, a maximum accuracy of 62%, a sensitivity of 70%, a specificity of 56%, and an AUC of 0.598 were estimated at a 4.5 kPa cutoff. The stiffness values tended to increase as the ISUP grade increased. In conclusion, it is feasible to detect and classify PCa using pelvic MRE. Our observations suggest that MRE could be a supplement to multi-parametric MRI for PCa detection. Full article
(This article belongs to the Special Issue MRI in Prostate Cancer)
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<p>Flowchart of the case-accrual process.</p>
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<p>A representative case of a 72-year-old man with prostate cancer with a Gleason score of 7 (4 + 3) in the transition zone. (<b>a</b>) T2-weighted image shows a 3 cm low-signal-intensity (SI) lesion (large arrow) in the left transition zone (TZ) with an extension (small arrow) to the neighboring peripheral zone (PZ). It is difficult to demarcate low SI in the benign prostatic hyperplasia (BPH) nodule in the right TZ. (<b>b</b>) Diffusion-weighted image (b value, 2000 s/mm<sup>2</sup>) showing a heterogeneous high SI. (<b>c</b>) Corresponding apparent diffusion coefficient map also showing a reciprocal low SI in the tumor. Some diffusion-restricted areas are also seen in the BPH nodule in the right TZ. (<b>d</b>) Elastogram fused with T2-weighted image showing a high stiffness value (red area, white arrow) in the tumor. Compared with the stiffness value of 7.3 kilopascals in the tumor, the BPH nodule (yellow arrow) was measured at 4.1 kilopascals and normal parenchyma in the PZ (green arrow) indicated 3.2 kilopascals.</p>
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<p>Box and whisker plots comparing the stiffness values of prostate cancer, benign prostatic hyperplasia (BPH), and normal parenchyma according to tumor location. For both peripheral-zone (<b>a</b>) and transition-zone cancers (<b>b</b>), the stiffness value of prostate cancer was higher than normal parenchyma; however, it did not show a significant difference compared to BPH. The middle line in each box represents the median. The lower and upper boundaries of the boxes represent the lower and upper quartiles (25th and 75th percentiles, respectively). The whiskers indicate the range from the maximum to the minimum calculated stiffness values in pascals.</p>
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<p>A box and whisker plot comparing the stiffness values of prostate cancer according to International Society of Urologic Pathologists (ISUP) grade group. The mean stiffness value of prostate cancer shows an increasing tendency as ISUP grade increases. The middle line in each box represents the median. The lower and upper boundaries of the boxes represent the lower and upper quartiles (25th and 75th percentiles, respectively). The whiskers indicate the range from the maximum to the minimum calculated stiffness values in pascals.</p>
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<p>A representative case of a 73-year-old man with a benign prostatic hyperplasia (BPH) nodule (arrows) showing the internal heterogeneity of the stiffness value. (<b>a</b>) T2-weighted image shows a large BPH nodule with heterogeneous signal intensity (SI) in the transition zone. (<b>b</b>) Diffusion-weighted image (b value, 2000 s/mm<sup>2</sup>) showing a heterogeneous high SI in the BPH nodule. (<b>c</b>) The corresponding apparent diffusion coefficient map also shows a reciprocal heterogeneous low SI in the BPH nodule. (<b>d</b>) Elastogram fused with T2-weighted image shows a wide range of stiffness values in the BPH nodule. Some portions indicate a stiffness value of 8 kilopascals, which is similar to that of prostate cancer.</p>
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18 pages, 1400 KiB  
Review
Advanced Imaging for Localized Prostate Cancer
by Patrick Albers and Adam Kinnaird
Cancers 2024, 16(20), 3490; https://doi.org/10.3390/cancers16203490 (registering DOI) - 15 Oct 2024
Viewed by 243
Abstract
Background/Objectives: Prostate cancer is a prevalent malignancy often presenting without early symptoms. Advanced imaging technologies have revolutionized its diagnosis and management. This review discusses the principles, benefits, and clinical applications of multiparametric magnetic resonance imaging (mpMRI), micro-ultrasound (microUS), and prostate-specific membrane antigen positron [...] Read more.
Background/Objectives: Prostate cancer is a prevalent malignancy often presenting without early symptoms. Advanced imaging technologies have revolutionized its diagnosis and management. This review discusses the principles, benefits, and clinical applications of multiparametric magnetic resonance imaging (mpMRI), micro-ultrasound (microUS), and prostate-specific membrane antigen positron emission tomography–computed tomography (PSMA PET/CT) in localized prostate cancer. Methods: We conducted a comprehensive literature review of recent studies and guidelines on mpMRI, microUS, and PSMA PET/CT in prostate cancer diagnosis, focusing on their applications in biopsy-naïve patients, those with previous negative biopsies, and patients under active surveillance. Results: MpMRI has demonstrated high sensitivity and negative predictive value in detecting clinically significant prostate cancer (csPCa). MicroUS, a newer technology, has shown promising results in early studies, with sensitivity and specificity comparable to mpMRI. PSMA PET/CT has emerged as a highly sensitive and specific imaging modality, particularly valuable for staging and detecting metastatic disease. All three technologies have been incorporated into urologic practice for prostate cancer diagnosis and management, with each offering unique advantages in different clinical scenarios. Conclusions: Advanced imaging techniques, including mpMRI, microUS, and PSMA PET/CT, have significantly improved the accuracy of prostate cancer diagnosis, staging, and management. These technologies enable more precise targeting of suspicious lesions during biopsy and therapy planning. However, further research, especially randomized controlled trials, is needed to fully establish the optimal use and inclusion of these imaging modalities in various stages of prostate cancer care. Full article
(This article belongs to the Special Issue Contemporary Diagnosis and Management of Prostate Cancer)
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<p>Prostate Risk Identification Using Micro-Ultrasound (PRI-MUS) score.</p>
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<p>Comparison of mpMRI and PSMA-PET images showing concordance and discordance between the imaging techniques and pathology. (Arrows point to areas of suspected prostate cancer on imaging and confirmed diagnosis on pathology; (<b>A</b>) shows an MRI lesion on patient 1’s left mid gland, (<b>B</b>) shows suspected prostate cancer by <sup>18</sup>F-PSMA-1007 in patient 1’s left mid gland, (<b>C</b>) shows prostate cancer found by pathology review in the left mid gland of the prostate, (<b>D</b>) shows an MRI lesion on patient 2’s right apex, (<b>E</b>) shows suspected bilateral prostate cancer by <sup>18</sup>F-PSMA-1007 in patient 2, (<b>F</b>) shows bilateral prostate cancer found on pathology review of the specimen).</p>
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14 pages, 4605 KiB  
Article
Electrical Impedance Spectroscopy as a Tool to Detect the Epithelial to Mesenchymal Transition in Prostate Cancer Cells
by Lexi L. C. Simpkins, Luis A. Henriquez, Mary Tran and Tayloria N. G. Adams
Biosensors 2024, 14(10), 503; https://doi.org/10.3390/bios14100503 (registering DOI) - 15 Oct 2024
Viewed by 221
Abstract
Prostate cancer (PCa) remains a significant health threat, with chemoresistance and recurrence posing major challenges despite advances in treatment. The epithelial to mesenchymal transition (EMT), a biochemical process where cells lose epithelial features and gain mesenchymal traits, is linked to chemoresistance and metastasis. [...] Read more.
Prostate cancer (PCa) remains a significant health threat, with chemoresistance and recurrence posing major challenges despite advances in treatment. The epithelial to mesenchymal transition (EMT), a biochemical process where cells lose epithelial features and gain mesenchymal traits, is linked to chemoresistance and metastasis. Electrical impedance spectroscopy (EIS), a novel label-free electrokinetic technique, offers promise in detecting cell phenotype changes. In this study, we employed EIS to detect EMT in prostate cancer cells (PCCs). PC3, DU145, and LNCaP cells were treated with EMT induction media for five days. EIS characterization revealed unique impedance spectra correlating with metastatic potential, distinguishing DU145 EMT+ and EMT− cells, and LNCaP EMT+ and EMT− cells (in combination with dielectrophoresis), with comparisons made to epithelial and mesenchymal controls. These changes were supported by shifts in electrical signatures, morphologies, and protein expression, including the downregulation of E-cadherin and upregulation of vimentin. No phenotype change was observed in PC3 cells, which maintained a mesenchymal phenotype. EMT+ cells were also distinguishable from mixtures of EMT+ and EMT− cells. This study demonstrates key advancements: the application of EIS and dielectrophoresis for label-free EMT detection in PCCs, characterization of cell electrical signatures after EMT, and EIS sensitivity to EMT transitions. Detecting EMT in PCa is important to the development of more effective treatments and overcoming the challenges of chemoresistance. Full article
(This article belongs to the Section Biosensors and Healthcare)
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<p>The EIS experimental workflow for characterizing phenotype changes in PCCs. (1) An illustration of EMT in cancer cells. Initially, cells exhibit an epithelial phenotype characterized by the expression of E-cadherin and ZO-1. Then, the cells undergo the downregulation of E-cadherin and ZO-1, transitioning to an intermediate phenotype. In this stage, there is a shift in the protein expression profile with an upregulation of N-cadherin and vimentin, leading to the mesenchymal phenotype. (2) DU145, PC3, and LNCaP cells were obtained from cryogenic storage, thawed, and expanded in proliferation media. Cells were seeded with EMT-inducing media and allowed 5 days to incubate. (3) Cells were characterized using EIS and the 3DEP analyzer. A phenotype change was validated by a nuclei stain and immunofluorescence imaging. The figure was created with Biorender.com.</p>
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<p>EIS cell analysis of PCCs. (<b>A</b>) Unnormalized and (<b>B</b>) normalized EIS spectrum of PC3 EMT+ cells (<span class="html-italic">n</span> = 1). (<b>C</b>) Unnormalized and (<b>D</b>) normalized EIS spectrum of DU145 EMT+ cells (<span class="html-italic">n</span> = 1). In all plots, data points represent average impedance, technical replicates equal 3 to 5 individual measurements, and error bars are standard error mean. Most error bars in (<b>A</b>–<b>D</b>) are too small to be visualized.</p>
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<p>Normalized EIS cell analysis of EMT-treated PCCs. (<b>A</b>) Average spectra of PC3 EMT− cells and PC3 EMT+ cells. (<b>B</b>) Average spectra of DU145 EMT− cells and DU145 EMT+ cells. Average spectra of (<b>C</b>) PC3 EMT− and PC3 EMT+ cells and (<b>D</b>) DU145 EMT− and DU145 EMT+ cells compared to epithelial and mesenchymal controls. Average normalized impedance of (<b>E</b>) PC3 EMT− and PC3+ cells and (<b>F</b>) DU145 EMT− and DU145 EMT+ cells compared to epithelial and mesenchymal controls. Error bars represent standard error mean. <span class="html-italic">n</span> = 3 for PC3, DU145, epithelial control, and mesenchymal control cells. Statistical analysis completed on pooled data sets; ** <span class="html-italic">p</span> &lt; 0.05, *** <span class="html-italic">p</span> &lt; 0.001, and **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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<p>Morphology assessment of EMT-treated PCCs. Phase contrast images overlayed with Hoechst-stained nuclei of PC3, DU145, and LNCaP cells without (EMT−) and with EMT (EMT+) treatment. The white arrows indicate a representative cell exhibiting characteristic epithelial morphology under EMT− conditions and mesenchymal morphology under EMT+ conditions.</p>
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<p>Immunofluorescent staining of PCCs without and with EMT treatment (EMT− and EMT+, respectively). The staining highlights the expression of epithelial marker E-cadherin and mesenchymal marker vimentin, both tagged with fluorescent labels. The quantification of fluorescent intensity for each marker is provided in the bar charts. Error bars represent the standard error mean. <span class="html-italic">n</span> = 3 for all conditions. The statistical analysis was completed on pooled data sets; ** <span class="html-italic">p</span> &lt; 0.05, and **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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11 pages, 11529 KiB  
Article
Novel Statistical Analysis Schemes for Frequency-Modulated Thermal Wave Imaging for Inspection of Ship Hull Materials
by Ishant Singh, Vanita Arora, Prabhu Babu and Ravibabu Mulaveesala
NDT 2024, 2(4), 445-455; https://doi.org/10.3390/ndt2040027 (registering DOI) - 15 Oct 2024
Viewed by 223
Abstract
In the field of thermal non-destructive testing and evaluation (TNDT&E), active thermography gained popularity due to its fast wide-area monitoring and remote inspection capability to assess materials without compromising their future usability. Among the various active thermographic methods, pulse compression-favorable frequency-modulated thermal wave [...] Read more.
In the field of thermal non-destructive testing and evaluation (TNDT&E), active thermography gained popularity due to its fast wide-area monitoring and remote inspection capability to assess materials without compromising their future usability. Among the various active thermographic methods, pulse compression-favorable frequency-modulated thermal wave imaging stands out for its enhanced detectability and depth resolution. In this study, an experimental investigation has been carried out on a hardened steel sample used in the ship building industry with a flat-bottom-hole-simulated defect using the frequency-modulated thermal wave imaging (FMTWI) technique. The defect detection capabilities of FMTWI have been investigated from various statistical post-processing approaches and compared by taking the signal-to-noise ratio (SNR) as a figure of merit. Among various adopted statistical post-processing techniques, pulse compression has been carried out using different methods, namely the offset removal with polynomial curve fitting and principal component analysis (PCA), which is an unsupervised learning approach for data reduction and offset removal with median centering for data standardization. The performance of these techniques was assessed through experimental investigations on hardened steel specimens used in ship building to provide valuable insights into their effectiveness in defect detection capabilities. Full article
(This article belongs to the Special Issue Advances in Imaging-Based NDT Methods)
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<p>Flow diagram for cross-correlation-based pulse compression with mean removal and PCA.</p>
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<p>Schematic for hardened steel sample with flat bottom hole at center.</p>
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<p>Illustration of the experimental setup used for FMTWI.</p>
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<p>Illustrated (<b>a</b>) raw temporal response and (<b>b</b>) offset-removed profile for FMTWI from 0.01 Hz to 0.1 Hz.</p>
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<p>Reconstructed pulse-compressed (<b>a</b>) spatial thermal distribution and (<b>b</b>) correlation coefficients of offset-removed temporal response for healthy and defective location.</p>
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<p>Reconstructed (<b>a</b>,<b>b</b>) spatial thermal distribution and (<b>c</b>,<b>d</b>) temporal response obtained from PC1 for mean and median centering, respectively.</p>
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<p>Reconstructed (<b>a</b>,<b>b</b>) spatial thermal distribution and (<b>c</b>,<b>d</b>) temporal response obtained from PC2 for mean and median centering, respectively.</p>
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<p>Reconstructed (<b>a</b>,<b>b</b>) spatial thermal distribution and (<b>c</b>,<b>d</b>) temporal response obtained from PC2 for mean and median centering, respectively.</p>
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<p>Reconstructed (<b>a</b>,<b>b</b>) spatial thermal distribution and (<b>c</b>,<b>d</b>) temporal response obtained from PC3 for mean and median centering, respectively.</p>
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<p>Cross-correlation profile for (<b>a</b>) mean-centered and (<b>b</b>) median-centered PC2 thermal profile.</p>
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<p>Illustrated reconstructed spatial thermal distribution obtained by pulse compression of (<b>a</b>) mean-centered and (<b>b</b>) median-centered PC2 signal.</p>
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25 pages, 10518 KiB  
Article
Establishment, Multiplication, and Biochemical Analysis of Embryogenic Lines of the Amazonian Palm Euterpe precatoria Mart. under Suspension Culture
by Alexandro Dias Martins Vasconcelos, Jéssica Cristina Barbosa Ferreira, Rennan Oliveira Meira, Inaê Mariê de Araújo Silva-Cardoso, Joane dos Santos Neves, Anderson Marcos de Souza, André Luís Xavier de Souza and Jonny Everson Scherwinski-Pereira
Forests 2024, 15(10), 1804; https://doi.org/10.3390/f15101804 (registering DOI) - 15 Oct 2024
Viewed by 335
Abstract
The palm Euterpe precatoria holds great social, cultural, and environmental importance. The heart of palm and the fruit are the main products used for industrialization due to their energetic properties. Thus, the aim of this study was to establish a suspension cultivation protocol [...] Read more.
The palm Euterpe precatoria holds great social, cultural, and environmental importance. The heart of palm and the fruit are the main products used for industrialization due to their energetic properties. Thus, the aim of this study was to establish a suspension cultivation protocol for the species using different explant sources. For this, eight lineages of E. precatoria embryogenic calluses were tested, with five in liquid medium Murashige and Skoog (MS) with 5 μM Picloram and three for comparison in semisolid medium MS with 20 μM Picloram and 5 μM 2iP. The growth curve was obtained by weighing the calli from 60 to 180 days of cultivation. The Gompertz model was applied, and growth kinetics were evaluated. At 100 days, the contents of total soluble sugars (TSSs) and total soluble proteins (TSPs) were determined. Principal components (PCA) were measured. According to the analysis of the data, the cultivation of E. precatoria lineages in liquid medium was successfully carried out, and the establishment was achieved. The model can be considered adequate since the R2 values found describe more than 90% of the growth kinetics of the lineages. In the liquid system, lineages L1 (from leaf explants and multiplied in semisolid medium—SM), L2 (from leaf explants and multiplied in SM), and L6 (from zygotic embryo explants and multiplied in liquid medium—LM) showed the shortest time to double the biomass accumulation. Multivariate analysis reveals a significant increase in masses in liquid cultures, represented by lineages L6 and L2. There was statistical difference in the amount of TSSs extracted; the highest TSS levels were observed in lineages cultivated in LM. The protein content found was very low, showing statistical differences among the lineages. In this work, the establishment and multiplication of embryogenic calli of E. precatoria are described for the first time, and they emerge as viable alternatives for the vegetative propagation of the species. Full article
(This article belongs to the Section Forest Ecophysiology and Biology)
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<p>Illustrative scheme of callogenesis for the establishment and multiplication of cellular aggregates in semisolid (MS medium supplemented with 20 μM Picloram and 5 μM 2iP) and liquid (MS supplemented with 5 μM Picloram) media.</p>
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<p>Aspects of embryogenic friable calli of <span class="html-italic">Euterpe precatoria</span> inoculated in liquid medium. (<b>A</b>) Lineages inoculated in a liquid medium, supplemented with 5 μM Picloram, under agitation; (<b>B</b>) friable callus used for establishing suspended cultures in a liquid medium; (<b>C</b>) weighing of calli cultivated in a liquid medium; (<b>D</b>) weighing of calli cultivated in a semisolid medium; (<b>E</b>) morphological aspect of embryogenic calli with friable consistency and color ranging from yellow to beige inoculated in semisolid medium. Bars = 1 cm.</p>
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<p>Calli and embryogenic lineages used in the biochemical characterization grown in liquid and semisolid medium of <span class="html-italic">Euterpe precatoria</span> Mart. (<b>A</b>). Lineages in liquid medium at 100 days of cultivation (L1, L3, L6, L2, and L5, respectively). (<b>B</b>,<b>D</b>). Aspect of the material inoculated in liquid medium. (<b>C</b>) Lineages in semisolid medium at 100 days of cultivation (L4, L7, and L8, respectively). L1, L2, and L3 lineages of calluses multiplied in liquid medium obtained from immature leaves cultivated in semisolid medium at concentrations of 450, 675, and 900 μM of Picloram, respectively. L5 and L6 lineages of calluses multiplied in liquid medium induced in semisolid medium from inflorescences and zygotic embryos, respectively. L4, L7, and L8 lineages originating from immature leaves, inflorescences, and zygotic embryos, respectively, induced and multiplied in semisolid medium.</p>
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<p>Development of cellular aggregates from different embryogenic lineages of <span class="html-italic">Euterpe precatoria</span> at different cultivation times in liquid medium. (<b>A</b>) Morphological aspects of calli on the day of inoculation (zero time in lineage L1). (<b>B</b>,<b>C</b>) Presence of isolated cells in suspension at 45 days (B = L1—lineage obtained from leaf explant cultivated in semisolid medium with 450 μM of Picloram, and C = L2—lineage obtained from leaf explant cultivated in semisolid medium with 675 μM of Picloram); (<b>D</b>–<b>G</b>) Presence of microcalli of the L2, note biomass increase; H. Detail of microcalli of the L2 at 60 days; (<b>H</b>) Calli of the L6 (lineage induced in semisolid medium from zygotic embryos) at 90 days; (<b>I</b>) Calli of the L6 at 180 days. (<b>J</b>,<b>K</b>) Representation of one of the repetitions and repotting of calli of the L6. Bars = 1 cm.</p>
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<p>Mean growth of cellular aggregates of <span class="html-italic">E. precatoria</span> in cell suspension medium under industrial shaker at 100 rpm and in semisolid medium as a function of the cell lineage. L1, L2, and L3 lineages multiplied in liquid medium obtained from immature leaves of adult plants cultivated in semisolid medium at auxin concentrations of 450, 675, and 900 μM of Picloram, respectively. L5 and L6 lineages multiplied in liquid medium and induced in semisolid medium from inflorescences and zygotic embryo, respectively. L4, L7, and L8 lineages originating from immature leaves, inflorescences, and zygotic embryos, respectively, induced and multiplied in semisolid medium.</p>
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<p>Linear regression analysis of the growth cellular aggregates of <span class="html-italic">E. precatoria</span> Mart. cultivated in liquid medium under an industrial shaker at 100 rpm and in semisolid medium as a function of the cell lineage. Note: L1, L2, and L3 lineages multiplied in liquid medium obtained from immature leaves of adult plants initially cultivated in semisolid medium at auxin concentrations of 450, 675, and 900 μM of Picloram, respectively. L5 and L6 lineages multiplied in liquid medium and induced in semisolid medium from inflorescences and zygotic embryos, respectively. L4, L7, and L8 lineages originating from immature leaves, inflorescences, and zygotic embryos, respectively, induced and multiplied in semisolid medium.</p>
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<p>Biplot PC1 × PC2 on the biomass increment variables over the cultivation time in <span class="html-italic">Euterpe precatoria</span> Mart. lineages cultivated in liquid and semisolid medium. R = (84.08%). Note: L1, L2, and L3 lineages multiplied in liquid medium obtained from immature leaves of adult plants initially cultivated in semisolid medium at auxin concentrations of 450, 675, and 900 μM of Picloram, respectively. L5 and L6 lineages multiplied in liquid medium and induced in semisolid medium from inflorescences and zygotic embryos, respectively. L4, L7, and L8 lineages originating from immature leaves, inflorescences, and zygotic embryos, respectively, induced and multiplied in semisolid medium.</p>
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<p>Morphological aspects of the best <span class="html-italic">Euterpe precatoria</span> Mart. lineages cultivated in liquid medium at the end of the experiment. (<b>A</b>–<b>C</b>). Calli belonging to lineage L2 originating immature leaves initially cultivated at 675 μM of Picloram. (<b>D</b>–<b>F</b>) Calli belonging to lineage L1 originating from immature leaves initially cultivated at 450 μM of Picloram. (<b>G</b>–<b>I</b>) Calli belonging to lineage L6 originating from zygotic embryo initially cultivated in Y3 medium. Barrs = 1 cm.</p>
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<p>Total soluble sugars (TSSs) of cell aggregates in suspension and in semisolid medium from different lineages of <span class="html-italic">Euterpe precatoria</span> Mart. Different lowercase letters indicate differences in lineages within each medium, and different uppercase letters indicate differences between lineages by Tukey’s test at the 5% probability level. Bars represent standard error. Note: L4, L7, and L8 represent lineages from immature leaves, immature inflorescences, and zygotic embryos, respectively, in semisolid medium (SM), and L1, L2, and L3 represent lineages from immature leaves, immature inflorescences, and zygotic embryos, respectively, in liquid medium (LM); L5 represents lineages from immature inflorescences in liquid medium and L6 represents lineages from zygotic embryos in liquid medium.</p>
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<p>Total soluble proteins (TSPs) of aggregates in suspension and in semisolid medium in genetic lineages of <span class="html-italic">Euterpe precatoria</span>. Different lowercase letters indicate significant differences in lineages within each medium, and different uppercase letters indicate differences between lineages by Tukey’s test at 5% probability level. Bars represent standard error. Note: L4, L7, and L8 represent lineages from immature leaves, immature inflorescences, and zygotic embryo, respectively, in semisolid medium (SM), and L1, L2, and L3 represent genetic lineages from immature leaves, immature inflorescences, and zygotic embryo, respectively, in liquid medium (LM); L5 represents lineages from immature inflorescences in liquid medium and L6 represents lineages from zygotic embryo in liquid medium.</p>
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<p>Anatomical sections of cell aggregates from <span class="html-italic">Euterpe precatoria</span> from different lineages (L1, L2, and L3) after 100 days of cultivation in a liquid medium. (<b>A</b>) Somatic embryo with protoderm and procambium; (<b>B</b>) Probable secondary somatic embryo; note vacuolated cells and a callogenic zone with more meristematic cells; (<b>C</b>) Somatic embryo with protoderm (dashed) and raphides. (<b>D</b>) Detail of somatic embryo with procambium and raphides (arrow); (<b>E</b>) Aggregates of vacuolated cells, isolated somatic embryos, and clusters of meristematic cells (arrow); (<b>F</b>) Somatic embryos with protoderm and procambium (arrow); notice isolated proembryos; (<b>G</b>) Area with cells undergoing cell division. (<b>H</b>) Secondary embryogenesis and beginning of tertiary somatic embryo formation (arrow); (<b>I</b>) Globular somatic embryo at a torpedo-like stage; (<b>J</b>) Somatic embryo with a structure similar to the suspensor (arrow). Abbreviations: (mz) meristematic zone; (pc) procambium; (pe) proembryo; (pt) protoderm; (se) somatic embryo; (sse) secondary somatic embryo; (te) torpedo somatic embryo. Bars: A, E, H = 500 µm; J = 250 µm; B, F, G = 200 µm; D, I = 100 µm; and C = 50 µm.</p>
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