[go: up one dir, main page]

 
 
Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (83)

Search Parameters:
Keywords = Meliaceae

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
33 pages, 7517 KiB  
Review
Insecticidal Triterpenes in Meliaceae III: Plant Species, Molecules, and Activities in Munronia–Xylocarpus
by Meihong Lin, Xiaohui Liu, Jiaxin Chen, Jiguang Huang and Lijuan Zhou
Int. J. Mol. Sci. 2024, 25(14), 7818; https://doi.org/10.3390/ijms25147818 - 17 Jul 2024
Viewed by 741
Abstract
Plants of the Meliaceae family have long attracted researchers’ interest due to their various insecticidal activities, with triterpenes being the main active ingredients. In this paper, we discuss 93 triterpenoids with insecticidal activity from 37 insecticidal plant species of 15 genera (Munronia [...] Read more.
Plants of the Meliaceae family have long attracted researchers’ interest due to their various insecticidal activities, with triterpenes being the main active ingredients. In this paper, we discuss 93 triterpenoids with insecticidal activity from 37 insecticidal plant species of 15 genera (Munronia, Neobeguea, Pseudocedrela, Nymania, Quivisia, Ruagea, Dysoxylum, Soymida, Lansium, Sandoricum, Walsura, Trichilia, Swietenia, Turraea, and Xylocarpus) in the family Meliaceae. Among these genera, Trichilia deserves further research, with twelve species possessing insecticidal activity. The 93 insecticidal molecules included 27 ring-seco limonoids (comprising 1 ring A-seco group chemical, 1 ring B-seco group chemical, 5 ring D-seco group chemicals, 14 rings A,B-seco group chemicals, 5 rings B,D-seco group chemicals, and 1 rings A,B,D-seco group chemical), 22 ring-intact limonoids (comprising 5 cedrelone-class chemicals, 6 trichilin-class chemicals, 7 havanensin-class chemicals, 2 azadirone-class chemicals, 1 vilasinin-class chemical, and 1 other chemical), 33 2,30-linkage chemicals (comprising 25 mexicanolide-class chemicals and 8 phragmalin-class chemicals), 3 1,n-linkage-group chemicals, 3 onoceranoid-type triterpenoids, 2 apotirucallane-type terpenoids, 2 kokosanolide-type tetranortriterpenoids, and 1 cycloartane triterpene. In particular, 59 molecules showed antifeedant activity, 30 molecules exhibited poisonous effects, and 9 molecules possessed growth regulatory activity. Particularly, khayasin, beddomei lactone, 3β,24,25-trihydroxycycloartane, humilinolides A–E and methyl-2-hydroxy-3β-isobutyroxy-1-oxomeliac-8(30)-enate showed excellent insecticidal activities, which were comparable to that of azadirachtin and thus deserved more attention. Moreover, it was noteworthy that various chemicals (such as 12α-diacetoxywalsuranolide, 11β,12α-diacetoxycedrelone, 1α,7α,12α-triacetoxy-4α-carbomethoxy-11β-hydroxy-14β,15β-epoxyhavanensin, and 11-epi-21-hydroxytoonacilide, etc.) from Turraea showed excellent insecticidal activity. Specially, the insecticidal activity of khayasin from Neobeguea against the coconut leaf beetle were similar to that of rotenone. Therefore, it was a promising candidate insecticide for the control of the coconut leaf beetle. Full article
(This article belongs to the Special Issue Latest Review Papers in Biochemistry 2024)
Show Figures

Figure 1

Figure 1
<p>Structures of cycloartane chemicals.</p>
Full article ">Figure 2
<p>Structures of apotirucallane-type terpenoids.</p>
Full article ">Figure 3
<p>Structures of onoceranoid-type triterpenoids.</p>
Full article ">Figure 4
<p>Structures of ring intact limonoids: azadirone-class chemicals.</p>
Full article ">Figure 5
<p>Structures of ring intact limonoids: cedrelone-class chemicals.</p>
Full article ">Figure 6
<p>Structures of ring intact limonoids: havanensin-class chemicals.</p>
Full article ">Figure 6 Cont.
<p>Structures of ring intact limonoids: havanensin-class chemicals.</p>
Full article ">Figure 7
<p>Structures of ring intact limonoids: trichilin-class chemicals.</p>
Full article ">Figure 8
<p>Structures of ring intact limonoids: vilasinin-class chemicals.</p>
Full article ">Figure 9
<p>Structures of ring intact limonoids: other chemicals.</p>
Full article ">Figure 10
<p>Structures of ring A-seco group chemicals.</p>
Full article ">Figure 11
<p>Structures of ring B-seco group chemicals.</p>
Full article ">Figure 12
<p>Structures of ring D-seco group chemicals.</p>
Full article ">Figure 13
<p>Structures of rings A,B-seco group: prieurianin-class chemicals.</p>
Full article ">Figure 14
<p>Structures of rings A,B-seco group: other chemicals.</p>
Full article ">Figure 14 Cont.
<p>Structures of rings A,B-seco group: other chemicals.</p>
Full article ">Figure 15
<p>Structures of rings B,D-seco group: andirobin-class chemicals.</p>
Full article ">Figure 16
<p>Structures of rings A,B,D-seco group chemicals.</p>
Full article ">Figure 17
<p>Structures of 1,n-linkage group chemicals.</p>
Full article ">Figure 18
<p>Structures of 2,30-linkage group: mexicanolide-class chemicals.</p>
Full article ">Figure 18 Cont.
<p>Structures of 2,30-linkage group: mexicanolide-class chemicals.</p>
Full article ">Figure 18 Cont.
<p>Structures of 2,30-linkage group: mexicanolide-class chemicals.</p>
Full article ">Figure 19
<p>Structures of 2,30-linkage group: phragmalin-class chemicals.</p>
Full article ">Figure 19 Cont.
<p>Structures of 2,30-linkage group: phragmalin-class chemicals.</p>
Full article ">Figure 20
<p>Structures of kokosanolides-type tetranortriterpenoids.</p>
Full article ">
15 pages, 3072 KiB  
Review
Insights into the Mechanism of Action of the Degraded Limonoid Prieurianin
by Gérard Vergoten and Christian Bailly
Int. J. Mol. Sci. 2024, 25(7), 3597; https://doi.org/10.3390/ijms25073597 - 22 Mar 2024
Viewed by 1106
Abstract
Limonoids are extremely diversified in plants, with many categories of products bearing an intact, rearranged or fragmented oxygenated scaffold. A specific subgroup of fragmented or degraded limonoids derives from the tetranortriterpenoid prieurianin, initially isolated from the tree Trichilia prieuriana but also found in [...] Read more.
Limonoids are extremely diversified in plants, with many categories of products bearing an intact, rearranged or fragmented oxygenated scaffold. A specific subgroup of fragmented or degraded limonoids derives from the tetranortriterpenoid prieurianin, initially isolated from the tree Trichilia prieuriana but also found in other plants of the Meliaceae family, including the more abundant species Aphanamixis polystachya. Prieurianin-type limonoids include about seventy compounds, among which are dregeanin and rohitukin. Prieurianin and analogs exhibit insecticidal, antimicrobial, antiadipogenic and/or antiparasitic properties but their mechanism of action remains ill-defined at present. Previous studies have shown that prieurianin, initially known as endosidin 1, stabilizes the actin cytoskeleton in plant and mammalian cells via the modulation of the architecture and dynamic of the actin network, most likely via interference with actin-binding proteins. A new mechanistic hypothesis is advanced here based on the recent discovery of the targeting of the chaperone protein Hsp47 by the fragmented limonoid fraxinellone. Molecular modeling suggested that prieurianin and, to a lesser extent dregeanin, can form very stable complexes with Hsp47 at the protein–collagen interface. Hsp-binding may account for the insecticidal action of the product. The present review draws up a new mechanistic portrait of prieurianin and provides an overview of the pharmacological properties of this atypical limonoid and its chemical family. Full article
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Chemical structures of the basic limonoid skeleton (with the four cycles A-B-C-D and numbering system) and various intact or fragmented (degraded) limonoid cores.</p>
Full article ">Figure 2
<p>Four other limonoids isolated from <span class="html-italic">Trichilia prieuriana</span> A. Juss. together with prieurianin.</p>
Full article ">Figure 3
<p>Plants containing prieurianin. An illustration of the leaves, twigs and fruits of <span class="html-italic">T. prieuriana</span> is presented (from M. Simo-Droissart, <a href="https://identify.plantnet.org/fr/k-world-flora/species/Trichilia%20prieuriana%20A.Juss./data" target="_blank">https://identify.plantnet.org/fr/k-world-flora/species/Trichilia%20prieuriana%20A.Juss./data</a> (accessed on 18 February 2024)).</p>
Full article ">Figure 4
<p>Prieurianin isolation process from the plant <span class="html-italic">Aphanamixis polystachya</span> (Wall.) R. Parker, as originally reported in [<a href="#B41-ijms-25-03597" class="html-bibr">41</a>]. The successive steps are schematized to show the full extraction/chromatography process, which afforded 443 mg of purified prieurianin starting with 6.6 kg of the dried roots.</p>
Full article ">Figure 5
<p>Prieurianin-type limonoids <b>13</b>–<b>15</b>.</p>
Full article ">Figure 6
<p>Effects of prieurianin on actin dynamics. Prieurianin stabilizes the actin cytoskeleton, reducing actin fiber flexibility and shrinkage and causing changes in vesicle trafficking. The drug action implicates actin-binding proteins and the modulation of endosome trafficking [<a href="#B95-ijms-25-03597" class="html-bibr">95</a>]. The action of prieurianin (blue rectangle) is schematized to illustrate binding to actin-binding proteins (green and yellow circles), including Rab-A1c GTPase (blue circles) and the resulting effects in actin fibers and plant cells.</p>
Full article ">Figure 7
<p>Molecular models of fraxinellone (<b>a</b>–<b>c</b>) and prieurianin (<b>d</b>–<b>f</b>) bound to Hsp47 (protein data bank (PDB) code 3ZHA). (<b>a</b>) Surface model with a close-up view of the binding cavity that accommodates the compound (<b>4</b>). (<b>b</b>) A view of the fraxinellone-binding site, with the hydrophobicity surface surrounding the drug-binding zone (color code indicated). (<b>c</b>) Binding map contacts for (<b>4</b>) bound to Hsp47 (color code indicated). Same models in panels (<b>d</b>–<b>f</b>) for compound (<b>5</b>). The modeling analysis was performed as previously described in [<a href="#B109-ijms-25-03597" class="html-bibr">109</a>,<a href="#B110-ijms-25-03597" class="html-bibr">110</a>].</p>
Full article ">
19 pages, 3650 KiB  
Article
Population Structure and Genetic Diversity of the Toona ciliata (Meliaceae) Complex Assayed with Chloroplast DNA Markers
by Zi-Yun Wang, Ying Hu, Yan-Wen Lv, Yu Xiao, Zi-Han He, Chao Wu and Xin-Sheng Hu
Genes 2024, 15(3), 320; https://doi.org/10.3390/genes15030320 - 28 Feb 2024
Viewed by 1380
Abstract
Toona ciliata is a deciduous or semi-deciduous tree species and belongs to the Toona genus of the Meliaceae family. Owing to low natural regeneration and over-exploitation, the species is listed as an endangered species at level II in China and its conservation has [...] Read more.
Toona ciliata is a deciduous or semi-deciduous tree species and belongs to the Toona genus of the Meliaceae family. Owing to low natural regeneration and over-exploitation, the species is listed as an endangered species at level II in China and its conservation has received increasing concern. Here, we sampled 447 individuals from 29 populations across the range-wide distribution of the T. ciliata complex in China and assessed their genetic variation using two chloroplast DNA markers. The results showed that the overall haplotype diversity and nucleotide diversity per site were high at h = 0.9767 and π = 0.0303 for the psbA-trnH fragment and h= 0.8999 and π = 0.0189 for the trnL-trnL fragment. Phylogenetic analysis supported the division of the natural distribution of T. ciliata complex into western and eastern regions. The genetic diversity was higher in the western region than in the eastern region, showing significant phylogeographic structure. Genetic differentiation among populations was moderate (Φst=42.87%), and the effects of isolation by distance (IBD) were significant. A neutrality test and mismatch distribution analysis indicated that the distribution of the T. ciliata complex generally did not expand, although a few local populations could likely expand after bottleneck effects. The overall results were complementary to and consolidated previous studies using mitochondrial and nuclear DNA markers. We finally discussed strategies for the genetic conservation of the T. ciliata complex. Full article
(This article belongs to the Section Plant Genetics and Genomics)
Show Figures

Figure 1

Figure 1
<p>Phylogenetic relationships among haplotypes H1–H46: (<b>A</b>) <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H fragment and (<b>B</b>) <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragment. Note that the haplotype sequences for the same code Hi (i = 1, …, 46) were different between the two fragments.</p>
Full article ">Figure 2
<p>A map showing the twenty-nine sample sites and the geographic distribution of the cpDNA haplotypes of the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H and <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragments: (<b>A</b>) the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H fragment and (<b>B</b>) the <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragment. The pie charts show different proportions of haplotypes within each population. Different haplotypes are denoted by code Hi (i = 1, 2, … 47). Each color in the pie charts represents one haplotype (H1–H47).</p>
Full article ">Figure 3
<p>Tests of the effects of isolation by distance (IBD) on population genetic differentiation: (<b>A</b>) the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H fragment and (<b>B</b>) the <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragment. Significant but weak IBD effects occurred among populations. The red line in each figure indicated the trend of the relationship between Fst/(1-Fst) and the logarithm of geographic distance.</p>
Full article ">Figure 4
<p>Phylogenetic relationships among 29 populations of the <span class="html-italic">T. ciliata</span> complex derived from concatenated sequences of the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H and <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragments. The maximum likelihood method with 1000 bootstrap resamples was used to draw the consensus tree. Populations in grey and blue were grouped into eastern and western regions, respectively.</p>
Full article ">Figure 5
<p>Phylogenetic relationships among 447 individuals using the concatenated sequences of the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H and <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragments. The tree was drawn by the maximum likelihood method.</p>
Full article ">Figure 6
<p>Population structure analysis of 447 individuals of the <span class="html-italic">T. ciliata</span> complex. (<b>A</b>) Cross-validation (CV) errors for the number of subpopulations (<span class="html-italic">K</span>) changing from 1 to 28. (<b>B</b>) A partitioned map of individuals with clustering assignments (<span class="html-italic">K</span> = 23) indicated in different colors. The proportions of genetic components from different subpopulations in each individual were indicated in different colors.</p>
Full article ">Figure 7
<p>Analysis of mismatch distribution using the concatenated sequences of the <span class="html-italic">psb</span>A-<span class="html-italic">trn</span>H and <span class="html-italic">trn</span>L-<span class="html-italic">trn</span>L fragments: (<b>A</b>) population DC and (<b>B</b>) population TL. The grey bar lines and green lines are the observed frequencies under different numbers of segregation sites of pairwise sequences, whereas the red lines are the expected frequencies under a model of sudden population expansion [<a href="#B48-genes-15-00320" class="html-bibr">48</a>].</p>
Full article ">
52 pages, 18448 KiB  
Article
A Taxonomic Review of South African Indigenous Meliaceae Using Molecular Systematics and Anatomical Data
by Mariam Oyefunke Oyedeji Amusa, Ross Dylan Stewart, Michelle van der Bank and Ben-Erik van Wyk
Diversity 2024, 16(2), 113; https://doi.org/10.3390/d16020113 - 8 Feb 2024
Cited by 1 | Viewed by 3338
Abstract
The Meliaceae are broadly distributed worldwide, with about 50 genera and over 1400 species. There are 11 genera in South Africa, with 13 indigenous and three naturalized species. Considering the diversity of the indigenous species of this family in South Africa and the [...] Read more.
The Meliaceae are broadly distributed worldwide, with about 50 genera and over 1400 species. There are 11 genera in South Africa, with 13 indigenous and three naturalized species. Considering the diversity of the indigenous species of this family in South Africa and the lack of recent studies encompassing these species, a taxonomic revision of the South African indigenous species of Meliaceae is presented here. Phylogenetic analysis, anatomical data, herbarium collections, and online data sources were used in this study. The results confirm the monophyly of Melioideae and Swietenioideae. The incongruence of Turraea previously reported was resolved in this study. Most representative genera of South African Meliaceae were recovered monophyletic with strong support. However, multiple samplings of species and including more markers could provide a better understanding of the relationships among South African species of Meliaceae. The review of the taxonomy of the South African Meliaceae, and especially the study of diagnostic characters and hitherto recorded natural distributions, have value in providing an up-to-date inventory of the indigenous genera and species and an easy means of identifying the taxa. Anatomical characters may be of systematic value to explore higher-level relationships in the family. This study is a contribution to tropical botany and to a more comprehensive database for the Meliaceae. Full article
(This article belongs to the Special Issue 2024 Feature Papers by Diversity’s Editorial Board Members)
Show Figures

Figure 1

Figure 1
<p>Diagnostic features of <span class="html-italic">Ekebergia capensis.</span> (<b>A</b>) Large evergreen tree up to 35 m tall. (<b>B</b>) Buttress or fluted root system. (<b>C1</b>) Glossy compound leaves with terminal leaflet. (<b>C2</b>) Ovate to lanceolate leaflets with acuminate apex. (<b>C3</b>) Leaf with long rachis [200–230 mm long]. (<b>D</b>) Rough bark. (<b>E</b>) Crystals in ray cells, shown with an arrow (bark tangential section). (<b>F</b>) Crystals lining the walls of secondary phloem fibers, shown with an arrow (bark cross section). The scale bar represents 100 μm. Photos by <span class="html-italic">D. Becking</span>–www.inaturalist, (accessed on 26 March 2019), (<b>A</b>,<b>B</b>); <span class="html-italic">B.-E. Van Wyk</span> (<b>C</b>,<b>D</b>), and <span class="html-italic">M. O. Oyedeji Amusa</span> (<b>E</b>,<b>F</b>).</p>
Full article ">Figure 2
<p>Recorded geographical distribution of <span class="html-italic">Ekebergia capensis</span> in the Flora of the southern Africa region (base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 3
<p>Diagnostic features of <span class="html-italic">Ekebergia pterophylla.</span> (<b>A</b>) Small tree with a flat crown up to 10 m tall. (<b>B</b>) Compound leaves with the leaflets elliptic to narrowly obovate, leathery, with a rounded to notched apex. (<b>C1</b>) Winged rachis. (<b>C2</b>) Winged petiole. (<b>D</b>) Fleshy, globose, dull yellow, red, or black fruit. Photos by <span class="html-italic">D. Becking</span>–www.inaturalist, (accessed on 26 March 2019) (<b>A</b>); <span class="html-italic">B.-E. Van Wyk</span> (<b>B</b>,<b>C</b>); and <span class="html-italic">T. Van der Merwe</span> (<b>D</b>).</p>
Full article ">Figure 4
<p>Recorded geographical distribution of <span class="html-italic">Ekebergia pterophylla</span>. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 5
<p>Diagnostic features of <span class="html-italic">Entandrophragma caudatum.</span> (<b>A</b>) Medium to large evergreen tree with a round crown up to 30 m tall. (<b>B</b>) Rough, flaking bark. (<b>C</b>) Ovate to lanceolate compound leaf with leaflets having tailed tips. (<b>D1</b>) Woody banana-like capsule which splits into 5 valves and curves back from the thickened tip (<b>D2</b>) Winged seed. Photos by <span class="html-italic">B. Wursten</span>–www.inaturalist, (accessed on 26 March 2019) (<b>A</b>,<b>B</b>,<b>D</b>) and <span class="html-italic">L. Loffler</span>–www.inaturalist, (accessed on 26 March 2019) (<b>C</b>).</p>
Full article ">Figure 6
<p>Recorded geographical distribution of <span class="html-italic">Entandrophragma caudatum</span> in the Flora of the southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 7
<p>Diagnostic features of <span class="html-italic">Nymania capensis.</span> (<b>A</b>) Woody shrub up to 4 m tall. (<b>B</b>) Large, conspicuous, papery fruit. (<b>C</b>) Numerous and narrow [24–44 μm in tangential diameter] vessels [wood cross section]. The scale bar represents 100 μm. Photos by <span class="html-italic">B.-E. Van Wyk</span> (<b>A</b>,<b>B</b>) and <span class="html-italic">M. O. Oyedeji Amusa</span> (<b>C</b>).</p>
Full article ">Figure 8
<p>Recorded geographical distribution of <span class="html-italic">Nymania capensis.</span> (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 9
<p>Diagnostic features of <span class="html-italic">Pseudobersama mossambicensis.</span> (<b>A</b>) Woody fruit covered with red anther-like appendages. (<b>B</b>) Compound leaf with oblong to elliptic leaflets [30–140 × 10–50 mm]. (<b>C</b>) Numerous (80–110 per sq. mm) and narrow (20–40 μm in tangential diameter) vessels arranged in radial rows of 2–5 [wood cross section]. The scale bar represents 100 μm. Photos by <span class="html-italic">B. Wursten</span>–www.inaturalist, (accessed on 20 January 2019) (<b>A</b>,<b>B</b>) and <span class="html-italic">P. Gasson</span> (<b>C</b>).</p>
Full article ">Figure 10
<p>Recorded geographical distribution of <span class="html-italic">Pseudobersama mossambicensis</span> in the flora of the southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 11
<p>Diagnostic features of <span class="html-italic">Trichilia dregeana.</span> (<b>A</b>) Evergreen tree with a large spreading crown up to 40 m tall. (<b>B</b>) Creamy-white and velvety flowers with short style. (<b>C1</b>) Leaflet with 8–12 widely spaced pairs of side veins. (<b>C2</b>) Pubescent petioles. (<b>D</b>) Compound leaf with acute to acuminate leaflets distinctly broadest near the apex. (<b>E1</b>) Fruit on a short, stout stalk without a distinct neck attaching to the stalk. (<b>E2</b>) Black seed covered with red aril. Photos by <span class="html-italic">J.H. Burring</span>–www.inaturalist (accessed on 20 January 2019) (<b>A</b>); <span class="html-italic">Tovervisje</span>–www.inaturalist (<b>B</b>); <span class="html-italic">D. Becking</span>–www.inaturalist (<b>C</b>); <span class="html-italic">J.M.K</span>–www.inaturalist (<b>D</b>) and <span class="html-italic">B. Dupont</span>–www.inaturalist (<b>E</b>).</p>
Full article ">Figure 12
<p>Recorded geographical distribution of <span class="html-italic">Trichilia dregeana</span> in the Flora of the The southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 13
<p>Diagnostic features of <span class="html-italic">Trichilia emetica.</span> (<b>A</b>) Evergreen medium to large tree with a dense spreading crown up to 30 m tall. (<b>B1</b>) Compound leaf with elliptic to obovate leaflets and rounded apex. (<b>B2</b>) Fruit with distinct neck attached to the stalk. (<b>C</b>) Leaflet with 13–16 closely spaced pairs of side veins. (<b>D</b>) Densely pubescent green to creamy-green flower. (<b>E</b>) Black seeds nearly covered with bright red aril. (<b>F</b>) Ideoblast cells in the cortex of the bark (cross section). The scale bar represents 100 μm. Photos by <span class="html-italic">A. Deacon</span>–www.inaturalist, (accessed on 20 January 2019) (<b>A</b>); <span class="html-italic">L. Loffler</span>–www.inaturalist (<b>B</b>); <span class="html-italic">D. Becking</span>–www.inaturalist (<b>C</b>–<b>E</b>); and <span class="html-italic">M.O. Oyedeji Amusa</span> (<b>F</b>).</p>
Full article ">Figure 14
<p>Recorded geographical distribution of <span class="html-italic">Trichilia emetica</span> in the Flora of the southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 15
<p>Diagnostic features of <span class="html-italic">Turraea floribunda.</span> (<b>A</b>) Tough shrub or small tree with round crown up to 10 m tall. (<b>B1</b>) Densely pubescent twig. (<b>B2</b>) Pubescent leaf and petiole. (<b>C</b>) Herring-bone venation on the leaf. (<b>D</b>) Orange to red glossy seeds borne on large woody star-shaped fruit. (<b>E</b>) Light green flowers with narrow petals. Photos by <span class="html-italic">B.-E. Van Wyk</span> (<b>A</b>,<b>D</b>); <span class="html-italic">L. Mhlongo</span> (<b>B</b>); <span class="html-italic">Magdastlucia</span>—www.inaturalist (accessed on 20 January 2019) (<b>C</b>) and <span class="html-italic">P. Vos</span>–www.inaturalist (E).</p>
Full article ">Figure 16
<p>Recorded geographical distribution of <span class="html-italic">Turraea floribunda</span> in the Flora of the the southern Africa region (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 17
<p>Diagnostic features of <span class="html-italic">Turraea obtusifolia.</span> (<b>A</b>) Scrambling, semi-evergreen shrub up to 5 m tall. (<b>B</b>) Variable leaves, which are sometimes lobed. (<b>C1</b>) White flowers with wide petals. (<b>C2</b>) Green, woody, segmented fruit. (<b>D</b>) Crystals in rays, shown by the arrow (bark tangential section). The scale bar represents 100 μm. Photos by <span class="html-italic">A. Notten</span>—www.inaturalist (accessed on 20 January 2019) (<b>A</b>–<b>C</b>) and <span class="html-italic">M.O. Oyedeji-Amusa</span> (<b>D</b>).</p>
Full article ">Figure 18
<p>Recorded geographical distribution of <span class="html-italic">Turraea obtusifolia</span> in the Flora of the the southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 19
<p>Diagnostic features of <span class="html-italic">Turraea nilotica</span>. (<b>A</b>) Clusters of flowers at the tip of the shoot. (<b>B1</b>) Long style and staminal tube broadened at the tip. (<b>B2</b>) Greenish white to slender yellow petal. (<b>C</b>) Cork-like flaking bark. (<b>D</b>) Simple, alternate, elliptic to obovate [100–160 × 80–120 mm] leaves. (<b>E</b>) Black seed covered with orange to red arils. Photos by <span class="html-italic">S. Holt</span>—www.inaturalist (accessed on 20 January 2019) (<b>A</b>,<b>E</b>); <span class="html-italic">B. Wursten</span>—www.inaturalist (<b>B</b>); and <span class="html-italic">P. Luraschi</span>—www.inaturalist (<b>C</b>,<b>D</b>).</p>
Full article ">Figure 20
<p>Recorded geographical distribution of <span class="html-italic">Turraea nilotica</span> in the flora of the the southern Africa region. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 21
<p>Diagnostic features of <span class="html-italic">Turraea pulchella.</span> (<b>A</b>) Shrublet up to 0.3 m tall. (<b>B1</b>) White flower with differentiated style-head. (<b>B2</b>) Simple, ovate leaf with the broadest part close to the leaf apex. Photos by <span class="html-italic">Graham</span>—www.inaturalist (accessed on 20 January 2019) (<b>A</b>) and <span class="html-italic">P. Wragg</span>—www.inaturalist (<b>B</b>).</p>
Full article ">Figure 22
<p>Recorded geographical distribution of <span class="html-italic">Turraea pulchella</span>. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 23
<p>Diagnostic features of <span class="html-italic">Turraea streyi.</span> (<b>A</b>) Thin-stemmed, rhizomatous suffrutex. (<b>B</b>) Trifoliate leaves with dentate apices. (<b>C</b>,<b>D</b>) Twigs with flowers. (<b>E</b>) Flower. Photos by <span class="html-italic">L.S. Mhlongo</span>, taken near Amandawe.</p>
Full article ">Figure 24
<p>Recorded geographical distribution of <span class="html-italic">Turraea streyi</span>. The recently discovered new populations are indicated at 3030BA. (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">Figure 25
<p>Diagnostic features of <span class="html-italic">Xylocarpus granatum.</span> (<b>A</b>) Small to medium-sized evergreen tree with many branches, up to 20 m tall. (<b>B</b>) Brown, flaked bark. (<b>C</b>) Paripinnate leaf with a small number of oblong-elliptic to obovate leaflets. (<b>D</b>) White to pink flowers with four sepals. (<b>E1</b>) Green, round leathery capsule (unripe). (<b>E2</b>) Brown, leathery capsule (ripe). (<b>F</b>) Septifragal capsule, dehiscing by four valves. (<b>G</b>) Large, tetrahedral, or pyramidal seeds of irregular shape. Photos by <span class="html-italic">R.C.J. Ward</span> (<b>A</b>); <span class="html-italic">I. Cowan</span> (<b>B</b>); <span class="html-italic">W. McCleland</span> (<b>C</b>); <span class="html-italic">E. Setiawan</span> (<b>D</b>,<b>G</b>); <span class="html-italic">Oldman 19510</span> (<b>E1</b>), <span class="html-italic">Bidault</span> (<b>E2</b>) and <span class="html-italic">C.W. Gan</span> (<b>F</b>) (All photos from—www.inaturalist (accessed on 20 January 2019) ).</p>
Full article ">Figure 26
<p>Recorded geographical distribution of <span class="html-italic">Xylocarpus granatum</span> in the Flora of the southern Africa region (a single individual tree has been recorded near Kosi Bay, at 2632DD). (Base map obtained from the South African National Biodiversity Institute).</p>
Full article ">
18 pages, 3076 KiB  
Article
Insights into the Root Sprouts of Toona fargesii in a Natural Forest: From the Morphology, Physiology, and Transcriptome Levels
by Qiangqiang Cheng, Jikai Ma, Chunce Guo, Qiuwei Zhong, Wanwen Yu, Ting Jia and Lu Zhang
Forests 2024, 15(2), 335; https://doi.org/10.3390/f15020335 - 8 Feb 2024
Cited by 1 | Viewed by 1114
Abstract
Toona fargesii (T. fargesii) is a deciduous tree of the Meliaceae family which is utilized for high-value timber. Interestingly, root sprouting is a typical reproductive pattern in T. fargesii. Nevertheless, the genetics underlying this phenomenon are still unclear. Here, three [...] Read more.
Toona fargesii (T. fargesii) is a deciduous tree of the Meliaceae family which is utilized for high-value timber. Interestingly, root sprouting is a typical reproductive pattern in T. fargesii. Nevertheless, the genetics underlying this phenomenon are still unclear. Here, three type of roots of T. fargesii were used for histological observation, plant endogenous hormone determination, non-structural carbohydrate (NSC) determination, and sequencing using the Illumina next-generation and PacBio SMRT platforms. Our results indicated that root sprouts originated from cork cambiums. Furthermore, indole-3-acetic acid (IAA), zeatin riboside (ZR), gibberellic acid 3 (GA3), and abscisic acid (ABA) content was significantly increased, while soluble sugar content was significantly decreased in the root sprouts. In addition, transcriptomic analysis suggested a total of 36.19 G of raw data from which 210 differentially expressed genes (DEGs) of were identified in RS vs. SR. Of these, the candidate DEGs were largely enriched in the citrate cycle, gluconeogenesis, starch and sucrose metabolism, and plant hormone signal transduction pathways. We therefore speculated that the accumulation of cytokinin and auxin might be induced by ATP-binding cassette-B 19 (ABCB19) and ABCG14, which were necessary for root sprouting. Additionally, transcription factors SQUAMOSA promoter binding protein-like 18 (SPL18) and NAM, ATAF1/2, and CUC2-14 (NAC14) were found in response to environmental water and epigenetic modification in RS. Overall, this study was to unravel the physiological and transcriptomic levels of the development of root sprouting in T. fargesii. Full article
Show Figures

Figure 1

Figure 1
<p>Morphology and anatomical structure of three types of roots and root bud development of <span class="html-italic">T. fargesii</span>. (<b>A</b>), RSs, a new root bud protrudes the epidermis; (<b>B</b>), root buds grow and the complete adventitious bud structure. (<b>C</b>), Transverse lateral roots secondary structure cross-sections in SRs, showing periderm, vascular cambium, secondary xylem, primary xylem, xylem ray. (<b>D</b>), Transverse lateral roots secondary structure cross-sections in SRs, showing periderm, vascular cambium, secondary xylem, primary xylem, xylem ray. (<b>E</b>), Transverse lateral roots secondary structure cross-sections in RSs, showing periderm, vascular cambium, secondary xylem, primary xylem, xylem ray. (<b>F</b>), Transverse lateral roots secondary structure cross-sections in SRs, showing periderm, vascular cambium, secondary xylem, primary xylem, xylem ray. (<b>G</b>), Root buds elongate, and the shoot appears. (<b>H</b>), Root bud primordium polarity growth was established toward the root microtubules. Primary xylem (PX), Secondary xylem (SX), Vascular cambium (VC), Secondary phloem (SP), Phelloderm (Ph), Cork cambium (CC), Cork layer (CL), Root bud primordium (RBP), Root bud (RB). A–B bar = 1 cm; C–H bar = 200 μm.</p>
Full article ">Figure 2
<p>The root tissue physiological content of NSC and endogenous hormones on RSs, NRSs, and SRs. (<b>A</b>) ZR, (<b>B</b>) IAA, (<b>C</b>) ABA, (<b>D</b>) GA3 (<b>E</b>) soluble sugars, (<b>F</b>) starch, and (<b>G</b>) NSC. * indicates <span class="html-italic">p</span> &lt; 0.05, ** indicates <span class="html-italic">p</span> &lt; 0.01, *** indicates <span class="html-italic">p</span> &lt; 0.001 with two group.</p>
Full article ">Figure 3
<p>Profile of Auxin (<b>A</b>), cytokinins (<b>B</b>), abscisic acid (<b>C</b>) and gibberellins (<b>D</b>) synthesis, catabolism, transport, and signal transduction pathways related transcripts obtained from RS, NRS, and SR. Each column represents a treatment starting from four replications means. Red color indicates upregulated genes and blue color indicates downregulated genes. The transcripts corresponding to the genes are listed in <a href="#app1-forests-15-00335" class="html-app">Table S5</a>.</p>
Full article ">Figure 4
<p>KEGG pathway for the starch and sucrose metabolism pathway, glycolysis/gluconeogenesis and TCA cycle pathway of DEGs. The transcripts corresponding to the genes are listed in <a href="#app1-forests-15-00335" class="html-app">Table S6</a>.</p>
Full article ">Figure 5
<p>Profile of DEG transcription factors obtained from RS, NRS, and SR of <span class="html-italic">T. far</span>. Each column represents a treatment starting from 4 replicates. The FPKM in gene expression is designated as heatmap with normalized and log2. Red color indicates upregulated genes and blue color indicates downregulated genes as compared. To distinguish between different transcripts of the same unigene, we named the genes. The transcription factors belong to different gene families, zn-clus (<span class="html-italic">YOG2</span>, <span class="html-italic">UPC2</span>, <span class="html-italic">WOR2</span>, <span class="html-italic">MAL13</span>, <span class="html-italic">ACU15</span>), <span class="html-italic">WRKY</span> (<span class="html-italic">WRK53-1</span>, <span class="html-italic">WRK53-2</span>, <span class="html-italic">WRK53-3</span>, <span class="html-italic">WRK41</span>, <span class="html-italic">WRK40</span>, <span class="html-italic">WRK24</span>, <span class="html-italic">WRKY7</span>), <span class="html-italic">TRAF</span> (<span class="html-italic">NPR3</span>, <span class="html-italic">BPM2</span>), <span class="html-italic">TCP</span> (<span class="html-italic">TCP7</span>), <span class="html-italic">SWI</span>/<span class="html-italic">SNF-SWI3</span> (<span class="html-italic">YO338</span>), <span class="html-italic">SNF2</span> (<span class="html-italic">CHR28</span>), <span class="html-italic">SBP</span> (<span class="html-italic">SPL18</span>, <span class="html-italic">SPL1</span>), <span class="html-italic">PHD</span> (<span class="html-italic">Y4193</span>), Others (<span class="html-italic">ARR4-1</span>, <span class="html-italic">ARR4</span>, <span class="html-italic">CEK1</span>), <span class="html-italic">NAC</span> (<span class="html-italic">NAC14-1</span>, <span class="html-italic">NAC14-2</span>, <span class="html-italic">NAC14-3</span>, NAC14-4, <span class="html-italic">NAC66-1</span>, <span class="html-italic">NAC66-2</span>, <span class="html-italic">NAC66-3</span>, <span class="html-italic">NAC66-4</span>, <span class="html-italic">NAC90-1</span>, <span class="html-italic">NAC90-2</span>, <span class="html-italic">NAC17</span>, <span class="html-italic">NAC45-1</span>, <span class="html-italic">NAC45-2</span>, <span class="html-italic">NTL9</span>), <span class="html-italic">MYB</span>-related (<span class="html-italic">MY1R1</span>, <span class="html-italic">MYB4-1</span>, <span class="html-italic">MYB4-2</span>, <span class="html-italic">MYB48</span>), <span class="html-italic">MYB</span> (<span class="html-italic">MYB4</span>, <span class="html-italic">AS1</span>), <span class="html-italic">Jumonji</span> (<span class="html-italic">JM706</span>), <span class="html-italic">IWS1</span> (<span class="html-italic">IWS1</span>), <span class="html-italic">HSF</span> (<span class="html-italic">HSF30-1</span>, <span class="html-italic">HSF30-2</span>, <span class="html-italic">HSF30-3</span>, <span class="html-italic">HSF30-4</span>), <span class="html-italic">HB</span>-other (<span class="html-italic">PHX1</span>, <span class="html-italic">RLT3</span>), <span class="html-italic">HB-KNOX</span> (<span class="html-italic">KNAP3</span>, <span class="html-italic">HSBH1-1</span>, <span class="html-italic">HSBH1-2</span>), <span class="html-italic">HB-HD-ZIP</span> (<span class="html-italic">HAT4</span>), <span class="html-italic">GRAS</span> (<span class="html-italic">SCL1</span>, <span class="html-italic">SCL13-1</span>, <span class="html-italic">SCL13-2</span>, <span class="html-italic">SCL13-3</span>, <span class="html-italic">SCL13-4</span>, <span class="html-italic">SCL13-5</span>, <span class="html-italic">SCL14</span>, <span class="html-italic">CIGR1-1</span>, <span class="html-italic">CIGR1-2</span>, <span class="html-italic">CIGR1-3</span>, <span class="html-italic">GAIPB</span>), <span class="html-italic">GNAT</span> (<span class="html-italic">YP20</span>), <span class="html-italic">CPP</span> (<span class="html-italic">TCX2</span>), <span class="html-italic">C3H</span> (<span class="html-italic">C3H9</span>), <span class="html-italic">C2H2</span> (<span class="html-italic">CRZA</span>, <span class="html-italic">ACE1-1</span>, <span class="html-italic">ACE1-2</span>, <span class="html-italic">RPN4-1</span>, <span class="html-italic">RPN4-2</span>, <span class="html-italic">RPN4-3</span>, <span class="html-italic">RPN4-4</span>, <span class="html-italic">TRY5</span>, <span class="html-italic">ZN530</span>, <span class="html-italic">IDD15</span>, <span class="html-italic">SEBA</span>, <span class="html-italic">HBX4</span>, <span class="html-italic">UBI1P</span>, <span class="html-italic">ZAT12</span>, <span class="html-italic">IDD7-1</span>, <span class="html-italic">IDD7-2</span>, <span class="html-italic">ACE1</span>), C2C2-GATA (<span class="html-italic">GATA8-1</span>, <span class="html-italic">GATA8-2</span>, <span class="html-italic">GTAJ</span>, <span class="html-italic">HAT5</span>), <span class="html-italic">C2C2-CO</span>-like (<span class="html-italic">COL5</span>), <span class="html-italic">bZIP</span> (<span class="html-italic">CPC1</span>, <span class="html-italic">CPRF1-1</span>, <span class="html-italic">CPRF1-2</span>, <span class="html-italic">CPRF1-3</span>, <span class="html-italic">RF2B</span>, <span class="html-italic">RF2A</span>, <span class="html-italic">ATF1</span>, <span class="html-italic">MBZ11</span>), <span class="html-italic">bHLH</span> (<span class="html-italic">BH035</span>, <span class="html-italic">BH013</span>), <span class="html-italic">BES1</span> (<span class="html-italic">BEH4</span>), <span class="html-italic">B3</span> (<span class="html-italic">VAL3-1</span>, <span class="html-italic">VAL3-2</span>), <span class="html-italic">AUX</span>/<span class="html-italic">IAA</span> (<span class="html-italic">AX22D</span>, <span class="html-italic">IAA27</span>), <span class="html-italic">AP2</span>/<span class="html-italic">ERF-ERF</span> (<span class="html-italic">ERF60</span>, <span class="html-italic">ERF18</span>), <span class="html-italic">AP2</span>/<span class="html-italic">ERF-AP2</span> (<span class="html-italic">AIL1</span>).</p>
Full article ">
14 pages, 2972 KiB  
Article
In Vitro Anti-Inflammatory Study of Limonoids Isolated from Chisocheton Plants
by Erina Hilmayanti, Xuhao Huang, Supriatno Salam, Nurlelasari, Unang Supratman, Kazuya Kabayama and Koichi Fukase
Curr. Issues Mol. Biol. 2024, 46(1), 909-922; https://doi.org/10.3390/cimb46010058 - 20 Jan 2024
Viewed by 1330
Abstract
Chisocheton plants from the family Meliaceae have traditionally been used to treat several diseases; however, scientific evidence is limited. The most abundant chemical constituents of this plant are the limonoids, which are known for their various biological activities, including anti-inflammatory effects. However, the [...] Read more.
Chisocheton plants from the family Meliaceae have traditionally been used to treat several diseases; however, scientific evidence is limited. The most abundant chemical constituents of this plant are the limonoids, which are known for their various biological activities, including anti-inflammatory effects. However, the anti-inflammatory effects and underlying mechanisms of action of the constituents of Chisocheton plants have not been fully explored. In this report, we evaluated the anti-inflammatory activity of 17 limonoid compounds from Chisocheton plant primarily by measuring their inhibitory effects on the production of pro-inflammatory cytokines, including TNF-α, IL-6, IL-1β, and MCP-1, in LPS-stimulated THP-1 cells using an ELISA assay. Compounds 3, 5, 9, and 1417 exhibited significant activity in inhibiting the evaluated pro-inflammatory markers, with IC50 values less than 20 µM and a high selectivity index (SI) range. Compounds 3, 5, 9, and 15 significantly suppressed the expression of phosphorylated p38 MAPK in THP-1 cells stimulated with LPS. These findings support the use of limonoids from Chisocheton plants as promising candidates for anti-inflammatory therapy. Full article
(This article belongs to the Special Issue The Role of Bioactives in Inflammation)
Show Figures

Figure 1

Figure 1
<p>Structure of compounds <b>1</b>–<b>17</b>.</p>
Full article ">Figure 2
<p>Antagonist effects of LPS-stimulated TLR4-dependent NF-kB activation in HEK-Blue<sup>TM</sup> hTLR4 cells by compounds (<b>1</b>–<b>17</b>) at a concentration of 20 µM, and LPS-stimulated (10 ng/mL) after 1 h. All data from four independent experiments are expressed as mean ± SD. ## <span class="html-italic">p</span> &lt; 0.0001 vs. culture medium-only control group; ns: not significant, <span class="html-italic">p</span> &gt; 0.1, *** <span class="html-italic">p</span> &lt; 0.0001, vs. LPS stimulated-only group. The <span class="html-italic">p</span>-value was analyzed by one-way ANOVA, followed by Dunnett’s multiple comparisons test which was performed using GraphPad Prism 10.1.0.</p>
Full article ">Figure 3
<p>Relative effects of compounds <b>3</b>–<b>5</b>, <b>9</b>, <b>11</b>, <b>12</b>, <b>15</b>–<b>17,</b> and dexamethasone (DEX) as positive control at concentrations of 10 µM on the production of pro-inflammatory markers; TNF-α (<b>A</b>), IL-6 (<b>B</b>), IL-1β (<b>C</b>), and MCP-1 (<b>D</b>) in LPS-stimulated THP-1 cells. Data were normalized to the negative control group. All data from four independent experiments are expressed as mean ± SD. ## <span class="html-italic">p</span> &lt; 0.0001 vs. LPS (−) control group; ns: not significant, <span class="html-italic">p</span> &gt; 0.05, * <span class="html-italic">p</span> &lt; 0.01, ** <span class="html-italic">p</span> &lt; 0.001, *** <span class="html-italic">p</span> &lt; 0.0001 vs. LPS (+) control group. The <span class="html-italic">p</span>-value was analyzed using one-way ANOVA, followed by Dunnett’s multiple comparisons test which was performed using GraphPad Prism 10.1.0.</p>
Full article ">Figure 4
<p>Dose–response graph for compounds <b>3</b>, <b>4</b>, <b>5</b>, <b>9</b>, <b>12</b>, and <b>15</b> to evaluate TNF-α inhibition. All data from four independent experiments are expressed as mean ± SD. The dose–response data were normalized to the LPS-stimulated-only group and converted to % inhibition and interpolated linear equations to determine the IC<sub>50</sub> values. Data points represent the mean of percentage ± SEM of four independent experiments.</p>
Full article ">Figure 5
<p>Dose–response graph for compounds <b>3</b>, <b>5</b>, <b>9</b>, <b>15</b>, and <b>16</b> for the evaluation of IL-6 inhibi-tion. All data from four independent experiments are expressed as mean ± SD. The dose–response data were normalized to the LPS-stimulated-only group, converted to % inhibition, and interpo-lated to linear equations to determine IC<sub>50</sub> values. Data points represent the mean of percentage ± SEM of four independent experiments.</p>
Full article ">Figure 6
<p>Dose–response graph for compounds <b>3</b> and <b>5</b> for the evaluation of MCP-1 inhibition. All data from four independent experiments are expressed as mean ± SD. The dose–response data were normalized to the LPS-stimulated-only group, converted to % inhibition, and interpolated to linear equations to determine IC<sub>50</sub> values. Data points represent the mean of percentage ± SEM of four independent experiments.</p>
Full article ">Figure 7
<p>Effects of compounds <b>3</b>, <b>4</b>, <b>5</b>, <b>9</b>, <b>12</b>, <b>15</b>, and <b>16</b> on the expression of p-p38 MAPK activation ((<b>A</b>) Western blot analysis; (<b>B</b>) quantified relative phosphorylated-p38 MAPK; (<b>C</b>) quantified relative total p38 MAPK) in LPS-stimulated THP-1 cells. All data from three independent experiments are expressed as mean ± SD. ## <span class="html-italic">p</span> &lt; 0.1 vs. culture medium-only control group; ns: not significant; * <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> ≤ 0.0001 vs. LPS-only group. The <span class="html-italic">p</span>-value was analyzed using one-way ANOVA, followed by Dunnett’s multiple comparisons test which was performed using GraphPad Prism 10.1.0.</p>
Full article ">
22 pages, 12813 KiB  
Article
Oil Extraction and Natural Drying Kinetics of the Pulp and Seeds of Commercially Important Oleaginous Fruit from the Rainforests of Guyana
by Shaveshwar Deonarine, Navindra Soodoo, Laziz Bouzidi and Suresh S. Narine
Processes 2023, 11(12), 3292; https://doi.org/10.3390/pr11123292 - 24 Nov 2023
Cited by 2 | Viewed by 1554
Abstract
Ambient sun drying is the method most used by Indigenous communities for preserving fruits and seeds harvested from the forest. It is an effective method to increase the shelf-life of highly perishable foods and prevent spoilage until important bioactive compounds can be extracted [...] Read more.
Ambient sun drying is the method most used by Indigenous communities for preserving fruits and seeds harvested from the forest. It is an effective method to increase the shelf-life of highly perishable foods and prevent spoilage until important bioactive compounds can be extracted at distant locations. The ambient sun drying kinetics and oil extraction of the pulp and seeds of commercially important oleaginous fruit directly obtained from the rainforests and swamps of Guyana, namely Astrocaryum vulgare (Awara), Astrocaryum aculeatum (Kuru), Oenocarpus bacaba (Turu), Mauritia flexuosa (Ite), Euterpe oleracea (Acai), Caryocar nuciferum (Souari), Attalea maripa (Kukrit), and Carapa guianensis (Crabwood), were studied. The fruits were dried under ambient conditions from initial moisture contents ranging from 24–71% to a final moisture content of 5%. Three models, the Lewis model, the modified Page model, and the standard logistic function (SLF) model, were utilized to model the drying kinetics and to estimate the parameters governing the drying process. These models were demonstrated to fit the experimental data with excellent goodness of fit (>0.98). The SLF, never used before to model drying kinetics, was observed to be the best-suited model overall, with the highest correlation coefficient and the least Chi-square (χ2). Depending on the fruit type, the estimated point where the maximum drying rate occurs varies from 35 min to 350 min for sun-dried fruit pulp and up to 4000 min for sun-dried kernels. The steepness of the drying curves varied from −0.5 to −3.5 g/min. The results of this work will aid in the design, development, optimization, and control of the ambient drying processes of economically and functionally important oleaginous forest fruits. This knowledge will assist in addressing the key challenge of spoilage faced by Indigenous communities in the preservation of tropical oleaginous fruits and seeds, possibly aiding in the preservation of functional characteristics of the extracted oils and adducing to the sustainable economic utilization of such fruit. Full article
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Regions of Guyana outlining where the fresh fruits and seeds were sourced. Inset is a map of the natural regions. <span class="html-italic">Astrocaryum aculeatum</span> (AA), <span class="html-italic">Oenocarpus bacaba</span> (OB), <span class="html-italic">Mauritia flexuosa</span> (MF), <span class="html-italic">Carapa guianensis</span> (CG), and <span class="html-italic">Attalea maripa</span> (AM) from Region #1 (yellow star); <span class="html-italic">Astrocaryum vulgare</span> (AV) from Region# 2 (red star); and <span class="html-italic">Euterpe oleracea</span> (EO) and <span class="html-italic">Caryocar nuciferum</span> (CN) from region 9 (blue star). Image source: <a href="https://www.dreamstime.com/map-administrative-division-guyana/" target="_blank">https://www.dreamstime.com/map-administrative-division-guyana/</a> (accessed on 1 October 2023).</p>
Full article ">Figure 2
<p>Observed mass loss data as a function of time predicted by the standard logistic model for fresh sun-dried pulps of (<b>a1</b>) <span class="html-italic">Astrocaryum aculeatum</span> (AAP), (<b>a2</b>) <span class="html-italic">Astrocaryum vulgare</span> (AVP), (<b>a3</b>) <span class="html-italic">Euterpe oleracea</span> (EOP), (<b>a4</b>) <span class="html-italic">Oenocarpus bacaba</span> (OBP) and (<b>a5</b>) <span class="html-italic">Mauritia flexuosa</span> (MFP) and sun-dried seeds of (<b>b1</b>) <span class="html-italic">Astrocaryum aleatum</span> (AAS) and (<b>b2</b>) <span class="html-italic">Carap guianensis</span> (CGS).</p>
Full article ">Figure 2 Cont.
<p>Observed mass loss data as a function of time predicted by the standard logistic model for fresh sun-dried pulps of (<b>a1</b>) <span class="html-italic">Astrocaryum aculeatum</span> (AAP), (<b>a2</b>) <span class="html-italic">Astrocaryum vulgare</span> (AVP), (<b>a3</b>) <span class="html-italic">Euterpe oleracea</span> (EOP), (<b>a4</b>) <span class="html-italic">Oenocarpus bacaba</span> (OBP) and (<b>a5</b>) <span class="html-italic">Mauritia flexuosa</span> (MFP) and sun-dried seeds of (<b>b1</b>) <span class="html-italic">Astrocaryum aleatum</span> (AAS) and (<b>b2</b>) <span class="html-italic">Carap guianensis</span> (CGS).</p>
Full article ">Figure 3
<p>Comparison of experimental with predicted mass for <span class="html-italic">Euterpe oleracea</span> sun-dried pulp by (<b>a</b>) the modified Page and (<b>b</b>) SLF models. Dashed lines are linear fits of the data (<span class="html-italic">R</span><sup>2</sup> = 1, slope = 1.0 ± 0.02).</p>
Full article ">Figure 4
<p>Scale parameter <math display="inline"><semantics> <mrow> <msub> <mi>t</mi> <mn>0</mn> </msub> </mrow> </semantics></math> for sun-dried pulp of fruits obtained with the modified Page (M. Page) and standard logistic models (SLF).</p>
Full article ">Figure 5
<p>Drying rates of (<b>a</b>) sun-dried pulp and (<b>b</b>) sun-dried seeds of oleaginous fruits from Guyana.</p>
Full article ">Figure 6
<p>Pictograph of the drying process and extraction of oil from the pulp and kernels (<b>i</b>) <span class="html-italic">Astrocaryum vulgare</span> (AV) (<b>i-a</b>) pulp (<b>i-b</b>) kernel, (<b>ii</b>) <span class="html-italic">Astrocaryum aculeatum</span> (AA) (<b>ii-a</b>) pulp (<b>ii-b</b>) kernel, (<b>iii</b>) <span class="html-italic">Oenocarpus bacaba</span> (OB), (<b>iv</b>) <span class="html-italic">Euterpe oleracea</span> (EO), (<b>v</b>) <span class="html-italic">Mauritia flexuosa</span> (MF), (<b>vi</b>) <span class="html-italic">Carapa guianensis</span>, (CG) (<b>vii</b>) <span class="html-italic">Caryocar nuciferum</span> (CN), and (<b>viii</b>) <span class="html-italic">Attalea maripa</span> (AM).</p>
Full article ">Figure 6 Cont.
<p>Pictograph of the drying process and extraction of oil from the pulp and kernels (<b>i</b>) <span class="html-italic">Astrocaryum vulgare</span> (AV) (<b>i-a</b>) pulp (<b>i-b</b>) kernel, (<b>ii</b>) <span class="html-italic">Astrocaryum aculeatum</span> (AA) (<b>ii-a</b>) pulp (<b>ii-b</b>) kernel, (<b>iii</b>) <span class="html-italic">Oenocarpus bacaba</span> (OB), (<b>iv</b>) <span class="html-italic">Euterpe oleracea</span> (EO), (<b>v</b>) <span class="html-italic">Mauritia flexuosa</span> (MF), (<b>vi</b>) <span class="html-italic">Carapa guianensis</span>, (CG) (<b>vii</b>) <span class="html-italic">Caryocar nuciferum</span> (CN), and (<b>viii</b>) <span class="html-italic">Attalea maripa</span> (AM).</p>
Full article ">Figure 6 Cont.
<p>Pictograph of the drying process and extraction of oil from the pulp and kernels (<b>i</b>) <span class="html-italic">Astrocaryum vulgare</span> (AV) (<b>i-a</b>) pulp (<b>i-b</b>) kernel, (<b>ii</b>) <span class="html-italic">Astrocaryum aculeatum</span> (AA) (<b>ii-a</b>) pulp (<b>ii-b</b>) kernel, (<b>iii</b>) <span class="html-italic">Oenocarpus bacaba</span> (OB), (<b>iv</b>) <span class="html-italic">Euterpe oleracea</span> (EO), (<b>v</b>) <span class="html-italic">Mauritia flexuosa</span> (MF), (<b>vi</b>) <span class="html-italic">Carapa guianensis</span>, (CG) (<b>vii</b>) <span class="html-italic">Caryocar nuciferum</span> (CN), and (<b>viii</b>) <span class="html-italic">Attalea maripa</span> (AM).</p>
Full article ">Figure 7
<p>Comparison of split fruit seed kernel. (<b>a</b>) Fresh <span class="html-italic">Astrocaryum aculeatum</span> (AAK); (<b>b</b>) Dried <span class="html-italic">Astrocaryum aculeatum</span> (AAK); (<b>c</b>) Fresh <span class="html-italic">Caryocar nuciferum</span> (CNK); (<b>d</b>) Fresh <span class="html-italic">Mauritia flexuosa</span> (MFS); (<b>e</b>) Fresh <span class="html-italic">Oenocarpus bacaba</span> (OBS); (<b>f</b>) Fresh <span class="html-italic">Euterpe oleracea</span> (EOS); (<b>g</b>) Dried <span class="html-italic">Attalea maripa</span> (AMS); and (<b>h</b>) Fresh <span class="html-italic">Carapa guianensis</span> (CGS).</p>
Full article ">
14 pages, 3021 KiB  
Article
Azadiradione, a Component of Neem Oil, Behaves as a Superoxide Dismutase Mimic When Scavenging the Superoxide Radical, as Shown Using DFT and Hydrodynamic Voltammetry
by Raiyan Sakib, Francesco Caruso, Stuart Belli and Miriam Rossi
Biomedicines 2023, 11(11), 3091; https://doi.org/10.3390/biomedicines11113091 - 18 Nov 2023
Cited by 2 | Viewed by 1568
Abstract
The neem tree, Azadirachta indica, belongs to the Meliaceae family, and its use in the treatment of medical disorders from ancient times to the present in the traditional medical practices of Asia, Africa and the Middle East is well-documented. Neem oil, extracted [...] Read more.
The neem tree, Azadirachta indica, belongs to the Meliaceae family, and its use in the treatment of medical disorders from ancient times to the present in the traditional medical practices of Asia, Africa and the Middle East is well-documented. Neem oil, extracted from the seeds of the fruit, is widely used, with promising medicinal benefits. Azadiradione, a principal antioxidant component of the seeds of A. indica, is known to reduce oxidative stress and has anti-inflammatory effects. To directly measure the antioxidant ability of neem oil, we used Rotating Ring Disk Electrode (RRDE) hydrodynamic voltammetry to quantify how it can scavenge superoxide radical anions. The results of these experiments show that neem oil is approximately 26 times stronger than other natural products, such as olive oil, propolis and black seed oil, which were previously measured using this method. Next, computational Density Functional Theory (DFT) methods were used to arrive at a mechanism for the scavenging of superoxide radical anions with azadiradione. Our work indicates that azadiradione is an effective antioxidant and, according to our DFT study, its scavenging of the superoxide radical anion occurs through a reaction mechanism in which azadiradione mimics the antioxidant action of superoxide dismutase (SOD). In this mechanism, analogous to the SOD enzymatic reaction, azadiradione is regenerated, along with the production of two products: hydrogen peroxide and molecular oxygen. This antioxidant process provides an explanation for azadiradione’s more general and protective biochemical effects. Full article
(This article belongs to the Section Drug Discovery, Development and Delivery)
Show Figures

Figure 1

Figure 1
<p>Azadiradione molecular structure.</p>
Full article ">Figure 2
<p>RRDE data for neem oil. The bottom part (negative current) shows the formation of superoxide detected at the disk electrode; the top (positive current) shows that the superoxide detected at the ring electrode decreases after adding neem oil aliquots.</p>
Full article ">Figure 3
<p>Collection efficiency of RRDE neem oil. The ring current/disk current (% Efficiency) at each concentration vs. added amount of neem oil shows a decreasing trend.</p>
Full article ">Figure 4
<p>Collection efficiency of neem oil, limited to the first four data points, shows the linear trend y = −2.271x + 20.469, R<sup>2</sup> = 0.9966.</p>
Full article ">Figure 5
<p>Azadiradione was DFT-minimized, and a proton was placed through van der separation forces using the O(carbonyl) associated with the cyclohexene ring, 2.60 Å.</p>
Full article ">Figure 6
<p>Upon DFT minimization of the azadiradione, as shown in <a href="#biomedicines-11-03091-f005" class="html-fig">Figure 5</a>, the O(carbonyl) captures the added proton without any energy barrier, with an O-H bond distance of 0.970 Å, while the associated C-O bond becomes longer, at 1.365 Å, compared to the other C=O carbonyl, 1.227 Å.</p>
Full article ">Figure 7
<p>Near the proton added to azadiradione in <a href="#biomedicines-11-03091-f006" class="html-fig">Figure 6</a>, a superoxide radical (O-O bond distance 1.373 Å) is initially placed through van der Waals forces, 2.60 Å apart (not shown). Upon DFT minimization, the proton becomes linked to superoxide, forming a HO<sub>2</sub> species, which results in its detachment from the remaining azadiradione neutral radical, O---H distance = 1.624 Å.</p>
Full article ">Figure 8
<p>A second proton is initially placed near the more exposed oxygen atom in HO<sub>2</sub>, 2.60 Å (not shown), making the whole arrangement a 1+ charged radical system (from 2 protons plus the reacted negative superoxide). Upon DFT optimization, H<sub>2</sub>O<sub>2</sub> forms and detaches from the organic moiety, 1.572 Å, with the adjacent carbonyl having an only slightly longer CO bond length, 1.250 Å, than the carbonyl at the opposite end of the molecule, 1.220 Å.</p>
Full article ">Figure 9
<p>To the arrangement shown in <a href="#biomedicines-11-03091-f008" class="html-fig">Figure 8</a>, a 2nd superoxide radical was π-π-posed at the van der Waals separation, 3.50 Å from the center of the ring, making the system neutral and non-radical (not shown). After DFT optimization, the superoxide donated its unpaired electron to the ring, forming a molecule of O<sub>2</sub> (O-O bond 1.269 Å, much shorter than the 1.373 Å distance in the superoxide) that then detached from azadiradione, 3.791 Å. Meanwhile, the separation distance of H<sub>2</sub>O<sub>2</sub> from azadiradione increased, 1.685 Å. Thus, after the reaction of azadiradione with two superoxide radicals (<a href="#biomedicines-11-03091-f007" class="html-fig">Figure 7</a> and <a href="#biomedicines-11-03091-f009" class="html-fig">Figure 9</a>) and two protons (<a href="#biomedicines-11-03091-f006" class="html-fig">Figure 6</a> and <a href="#biomedicines-11-03091-f008" class="html-fig">Figure 8</a>), azadiradione is reformed and becomes ready for an additional cycle of superoxide radical scavenging. The reaction products are H<sub>2</sub>O<sub>2</sub> (<a href="#biomedicines-11-03091-f007" class="html-fig">Figure 7</a>) and O<sub>2</sub> (<a href="#biomedicines-11-03091-f009" class="html-fig">Figure 9</a>). <a href="#biomedicines-11-03091-sch001" class="html-scheme">Scheme 1</a> displays the whole process.</p>
Full article ">Figure 10
<p>Molecular structures of tetracyclic terpenoid neem oil compounds closely related to azadiradione, e.g., containing the cyclohexene-carbonyl moiety: azadirone (<b>A</b>), epoxyazadiradione (<b>B</b>), gedunin (<b>C</b>), nimbolide (<b>D</b>) and zafaral (<b>E</b>).</p>
Full article ">Scheme 1
<p>Azadiradione scavenging of superoxide follows the same pattern as the superoxide dismutase enzyme, Reaction (3). No energy barriers were observed for all reactions. In the first step, the initially van-der-Waals-separated proton and O(carbonyl) are established, and upon DFT geometry optimization, the corresponding ΔG<sub>reaction</sub> is −552.3 kcal/mol (top). Next, a green-colored superoxide is placed (van-der-Waals-separated to join the previously added proton), and C=O-H-O<sub>2</sub> is established (ΔG = −1362.5 kcal/mol) (<b>center right</b>). To the center right species, a second (turquoise-colored) proton is placed by the most exposed O atom in the O<sub>2</sub>-H-O-C moiety, and applying DFT minimization, the H<sub>2</sub>O<sub>2</sub> moiety forms and slightly detaches from O(carbonyl), ΔG = −117.3 kcal/mol (<b>center left</b>). Next, a second (pink-colored) superoxide is π-π-attached to the cyclohexene ring (<b>bottom left</b>), and upon DFT minimization, the superoxide transfers its unpaired electron to the ring, and O<sub>2</sub> is eliminated along with the previously formed H<sub>2</sub>O<sub>2</sub>, ΔG = −17.3 kcal/mol. Thus, the final products are indicated, including reformed azadiradione, ready to start another catalytic cycle (<b>bottom right</b>).</p>
Full article ">
14 pages, 7147 KiB  
Article
Putative Identification of New Phragmaline-Type Limonoids from the Leaves of Swietenia macrophylla King: A Case Study Using Mass Spectrometry-Based Molecular Networking
by José Diogo E. Reis, Paulo Wender P. Gomes, Paulo R. da C. Sá, Sônia das G. S. R. Pamplona, Consuelo Yumiko Y. e Silva, Maria Fátima das G. F. da Silva, Anupam Bishayee and Milton Nascimento da Silva
Molecules 2023, 28(22), 7603; https://doi.org/10.3390/molecules28227603 - 15 Nov 2023
Cited by 1 | Viewed by 1663
Abstract
Swietenia macrophylla King is a plant commonly known as Brazilian mahogany. The wood from its stem is highly prized for its exceptional quality, while its leaves are valued for their high content of phragmalin-type limonoids, a subclass of compounds known for their significant [...] Read more.
Swietenia macrophylla King is a plant commonly known as Brazilian mahogany. The wood from its stem is highly prized for its exceptional quality, while its leaves are valued for their high content of phragmalin-type limonoids, a subclass of compounds known for their significant biological activities, including antimalarial, antitumor, antiviral, and anti-inflammatory properties. In this context, twelve isolated limonoids from S. macrophylla leaves were employed as standards in mass spectrometry-based molecular networking to unveil new potential mass spectrometry signatures for phragmalin-type limonoids. Consequently, ultra-performance liquid chromatography coupled with high-resolution mass spectrometry was utilized for data acquisition. Subsequently, the obtained data were analyzed using the Global Natural Products Social Molecular Networking platform based on spectral similarity. In summary, this study identified 24 new putative phragmalin-type limonoids for the first time in S. macrophylla. These compounds may prove valuable in guiding future drug development efforts, leveraging the already established biological activities associated with limonoids. Full article
Show Figures

Figure 1

Figure 1
<p>Workflow to putative identification of new phragmaline-type limonoids from the leaves of <span class="html-italic">Swietenia macrophylla</span> King.</p>
Full article ">Figure 2
<p>Total Ion Chromatograms (TIC) from <span class="html-italic">Swietenia macrophylla</span> King leaves for DCMEt extract (<b>A</b>) and 12 standards (<b>B</b>) were obtained using UHPLC-HRMS in positive ionization mode (ESI<sup>+</sup>). The RT shift to compounds <b>1</b>–<b>3</b> is explained by the matrix effect in the extract caused by many compounds in the same range.</p>
Full article ">Figure 3
<p>General fragmentation pathways proposed for the standards (isolated limonoids). Main functional groups and reactions are highlighted: (<b>A</b>) hydroxy in blue shadow; (<b>B</b>) acetate in green shadow; (<b>C</b>) carbomethoxy in pink shadow; and (<b>D</b>) tiglate or benzoate in orange shadow. The neutral loss of H<sub>2</sub>O described in mechanism D1 could also occur via mechanism A, followed by loss of tiglate; (<b>E</b>) furan in yellow shadow; and (<b>F</b>) orthoester in red shadow. Loss of R-CO and R-COOH are characteristic for the 8,9,30-orthoester unit (R could be a methyl, isopropyl, tigloyl, or 2-methylbutyl).</p>
Full article ">Figure 4
<p>Matches between reference MS/MS spectra of standards and experimental MS/MS spectra of annotated limonoids, considering the mass shift/difference in red shadow (<b>A</b>,<b>B</b>). Molecular network of the main cluster (<b>C</b>). The V-shaped node corresponds to isolated limonoids and their respective structure. The text below the structures indicates the parent ion and RT of the isolated compounds. The thickness limit (the line that connects two nodes) represents a spectral similarity (thicker, more similar MS Spectrum 0.65 &lt; r &gt; 0.95) and the dotted edge shows ion identity feature grouping.</p>
Full article ">Figure 5
<p>Molecular network of the main cluster (<b>A</b>) (subfigures <b>A1</b> and <b>A2</b>) and nodes group (<b>B</b>). Arrows indicate the propagated limonoids (diamond node) and their possible structure. The text below the structures indicates the parent ion and RT of the propagated compounds. The thickness limit (the line that connects two nodes) represents a spectral similarity (thicker, more similar MS Spectrum 0.65 &lt; r &gt; 0.95) and the dotted edge shows ion identity feature grouping.</p>
Full article ">
17 pages, 925 KiB  
Article
Antiplasmodial and Antileishmanial Activities of a New Limonoid and Other Constituents from the Stem Bark of Khaya senegalensis
by Gabrielle Ange Amang à Ngnoung, Yves Oscar Nganso Ditchou, Peron Bosco Leutcha, Darline Dize, Simplice Joël Ndendoung Tatsimo, Lauve Rachel Yamthe Tchokouaha, Theodora Kopa Kowa, Babalwa Tembeni, Hamadou Mamoudou, Madan Poka, Patrick Hulisani Demana, Xavier Siwe Noundou, Fabrice Fekam Boyom and Alain Meli Lannang
Molecules 2023, 28(20), 7227; https://doi.org/10.3390/molecules28207227 - 23 Oct 2023
Cited by 4 | Viewed by 1704
Abstract
Plasmodium falciparum and Leishmania sp. resistance to antiparasitic drugs has become a major concern in malaria and leishmaniasis control. These diseases are public health problems with significant socioeconomic impacts, and mostly affect disadvantaged populations living in remote tropical areas. This challenge emphasizes the [...] Read more.
Plasmodium falciparum and Leishmania sp. resistance to antiparasitic drugs has become a major concern in malaria and leishmaniasis control. These diseases are public health problems with significant socioeconomic impacts, and mostly affect disadvantaged populations living in remote tropical areas. This challenge emphasizes the need to search for new chemical scaffolds that preferably possess novel modes of action to contribute to antimalarial and antileishmanial research programs. This study aimed to investigate the antimalarial and antileishmanial properties of a methanol extract (KS-MeOH) of the stem bark of the Cameroonian medicinal plant Khaya senegalensis and its isolated compounds. The purification of KS-MeOH led to the isolation of a new ordered limonoid derivative, 21β-hydroxybourjotinolone A (1a), together with 15 known compounds (1bc14) using a repeated column chromatography. Compound 1a was obtained in an epimeric mixture of 21α-melianodiol (1b) and 21β-melianodiol (1c). Structural characterization of the isolated compounds was achieved with HRMS, and 1D- and 2D-NMR analyses. The extracts and compounds were screened using pre-established in vitro methods against synchronized ring stage cultures of the multidrug-resistant Dd2 and chloroquine-sensitive/sulfadoxine-resistant 3D7 strains of Plasmodium falciparum and the promastigote form of Leishmania donovani (1S(MHOM/SD/62/1S). In addition, the samples were tested for cytotoxicity against RAW 264.7 macrophages. Positive controls consisted of artemisinin and chloroquine for P. falciparum, amphotericin B for L. donovani, and podophyllotoxin for cytotoxicity against RAW 264.7 cells. The extract and fractions exhibited moderate to potent antileishmanial activity with 50% inhibitory concentrations (IC50) ranging from 5.99 ± 0.77 to 2.68 ± 0.42 μg/mL, while compounds displayed IC50 values ranging from 81.73 ± 0.12 to 6.43 ± 0.06 μg/mL. They were weakly active against the chloroquine-sensitive/sulfadoxine-resistant Pf3D7 strain but highly potent toward the multidrug-resistant PfDd2 (extracts, IC50 2.50 ± 0.12 to 4.78 ± 0.36 μg/mL; compounds IC50 2.93 ± 0.02 to 50.97 ± 0.37 μg/mL) with selectivity indices greater than 10 (SIDd2 > 10) for the extract and fractions and most of the derived compounds. Of note, the limonoid mixture [21β-hydroxylbourjotinolone A (1a) + 21α-melianodiol (1b) + 21β-melianodiol (1c)] exhibited moderate activity against P. falciparum and L. donovani. This novel antiplasmodial and antileishmanial chemical scaffold qualifies as a promising starting point for further medicinal chemistry-driven development of a dually active agent against two major infectious diseases affecting humans in Africa. Full article
Show Figures

Figure 1

Figure 1
<p>Compounds isolated from the stem bark of <span class="html-italic">K. senegalensis</span> <b>1abc</b>–<b>14</b>.</p>
Full article ">Figure 2
<p>Important COSY and HMBC correlations of compound <b>1a</b>.</p>
Full article ">Figure 3
<p>Column diagram summarizing the biological activities of the compounds, fractions, and extract from <span class="html-italic">Khaya senegalensis</span>. The results with the same letters are not significantly different (<span class="html-italic">p</span> &lt; 0.05). The error bars represent the standard deviation of measurement of samples from duplicate runs.</p>
Full article ">
13 pages, 2476 KiB  
Article
Local Adaptation in Natural Populations of Toona ciliata var. pubescens Is Driven by Precipitation and Temperature: Evidence from Microsatellite Markers
by Yanru Fan, Jianhua Dai, Yi Wei and Jun Liu
Forests 2023, 14(10), 1998; https://doi.org/10.3390/f14101998 - 5 Oct 2023
Cited by 3 | Viewed by 1050
Abstract
Environmental factors are strong drivers of local adaptation in forest tree species. Toona ciliata var. pubescens, an endangered tree species endemic to China, is widely distributed across Eastern and Southwestern China. In this study, we used 8 genomic microsatellite markers and 17 [...] Read more.
Environmental factors are strong drivers of local adaptation in forest tree species. Toona ciliata var. pubescens, an endangered tree species endemic to China, is widely distributed across Eastern and Southwestern China. In this study, we used 8 genomic microsatellite markers and 17 EST-SSR markers across nine populations from the Yunnan–Kweichow Plateau and Eastern China, to explore the adaptive variation and genetic structure of T. ciliata var. pubescens. Patterns of population structure were apparent using a Bayesian clustering program, STRUCTURE, which identified four distinct clusters. We identified four outlier loci that were potentially under selection using the Dirichlet-multinomial and hierarchic simulation models. Through the Mantel test, it was found that geographic and climatic factors have jointly affected the genetic structure of T. ciliata var. pubescens in the study area. Based on redundancy analysis (RDA), it was shown that the correlation between climatic variables associated with variation is stronger than that of geographic variables. It is worth mentioning that the eight alleles from outlier loci have potentially adaptive and are associated with either precipitation or temperature variables. All analyses revealed high genetic diversity and significant genetic differentiation in the populations of T. ciliata var. pubescens. This indicated that the climatic variables including precipitation and temperature are drivers of local adaptation in the populations of T. ciliata var. pubescens. Full article
(This article belongs to the Section Genetics and Molecular Biology)
Show Figures

Figure 1

Figure 1
<p>Distribution of sampled natural populations of <span class="html-italic">T. ciliata</span> var. <span class="html-italic">pubescens</span>. The red dot represents the location of the sampling city, and the numbers 1–9 represent the name of the city.</p>
Full article ">Figure 2
<p>Analysis results of the genetic structure of the nine populations of <span class="html-italic">T. ciliata</span> var. <span class="html-italic">pubescens</span>. (<b>A</b>) The relationship between Delta K and K values. (<b>B</b>) The genetic structure of the <span class="html-italic">T. ciliata</span> var. <span class="html-italic">pubescens</span> population with different K values (K = 4–6).</p>
Full article ">Figure 3
<p>The principal coordinate analysis (PCoA) of the 384 <span class="html-italic">T. ciliata</span> var. <span class="html-italic">pubescens</span> individuals.</p>
Full article ">Figure 4
<p>Results of the BayeScan search for putative outlier loci affected by selection. (<b>A</b>) This plot presents FST against log10(<span class="html-italic">q</span>-value), which is the FDR analog of the <span class="html-italic">p</span>-value. The line represents threshold FDR = 0.05 and the red dots are the outlier loci that are potentially affected by selection. (<b>B</b>) Outlier loci were detected under the hierarchical island model (HIM) with ARLEQUIN 3.5. Loci significant at 5% (blue dots) and 1% (red dots) are indicated.</p>
Full article ">Figure 5
<p>RDA results of relative contributions of climate and altitude.</p>
Full article ">
13 pages, 2806 KiB  
Article
The Triterpenoids from Munronia pinnata and Their Anti-Proliferative Effects
by Xuerong Yang, Peiyuan Liu, Yulu Wei, Jingru Song, Xiaojie Yan, Xiaohua Jiang, Jianxing Li, Xiangqin Li, Dianpeng Li and Fenglai Lu
Molecules 2023, 28(19), 6839; https://doi.org/10.3390/molecules28196839 - 28 Sep 2023
Cited by 1 | Viewed by 1144
Abstract
Six new tirucallane-type triterpenoids, named munropenes A–F (16), were extracted from the whole plants of Munronia pinnata using a water extraction method. Their chemical structures were determined based on detailed spectroscopic data. The relative configurations of the acyclic structures [...] Read more.
Six new tirucallane-type triterpenoids, named munropenes A–F (16), were extracted from the whole plants of Munronia pinnata using a water extraction method. Their chemical structures were determined based on detailed spectroscopic data. The relative configurations of the acyclic structures at C-17 of munropenes A–F (16) were established using carbon–proton spin-coupling constants (2,3JC,H) and inter-proton spin-coupling constants (3JH,H). Furthermore, the absolute configurations of munropenes A–F (16) were determined through high-performance liquid chromatography (HPLC), single-crystal X-ray diffraction, and electronic circular dichroism (ECD) analyses. The antiproliferative effects of munropenes A–F were evaluated in five tumor cell lines: HCT116, A549, HepG2, MCF7, and MDAMB. Munropenes A, B, D, and F (1, 2, 4, and 6) inhibited proliferation in the HCT116 cell line with IC50 values of 40.90, 19.13, 17.66, and 32.62 µM, respectively. Full article
Show Figures

Figure 1

Figure 1
<p>The chemical structures of munropenes A–F (<b>1</b>–<b>6</b>).</p>
Full article ">Figure 2
<p>Selected 2D NMR correlations for munropenes A–F (<b>1</b>–<b>6</b>).</p>
Full article ">Figure 3
<p>Key ROESY correlations and relative configuration for munropenes A, B (<b>1</b>, <b>2</b>) (protons of methyl groups are omitted).</p>
Full article ">Figure 4
<p>Rotation models for the (<b>a</b>) C-17–C-20, (<b>b</b>) C-20–C-22, (<b>c</b>) C-22–C-23, and (<b>d</b>) C-23–C-24 bonds of munropene A (<b>1</b>). “nd” means that the magnitude was not determined. Dashed arrows indicate ROESY correlations.</p>
Full article ">Figure 5
<p>X-ray crystal structure of munropene A (<b>1</b>).</p>
Full article ">Figure 6
<p>Experimental and calculated ECD spectra of munropene B (<b>2</b>).</p>
Full article ">Figure 7
<p>Experimental and calculated ECD spectra of <b>5</b>.</p>
Full article ">
11 pages, 11175 KiB  
Article
Distribution and Management of the Invasive Swietenia macrophylla King (Meliaceae) at the Foot of a Protected Area in Luzon Island, Philippines
by Ericson Esquibel Coracero
J. Zool. Bot. Gard. 2023, 4(3), 637-647; https://doi.org/10.3390/jzbg4030045 - 20 Sep 2023
Cited by 2 | Viewed by 8780
Abstract
Invasive alien plant species (IAPS) pose one of the most significant threats to native biodiversity. Swietenia macrophylla, or big leaf mahogany, is among the most threatening invasive plants in the Philippines. This article aimed to formally document the presence of S. macrophylla [...] Read more.
Invasive alien plant species (IAPS) pose one of the most significant threats to native biodiversity. Swietenia macrophylla, or big leaf mahogany, is among the most threatening invasive plants in the Philippines. This article aimed to formally document the presence of S. macrophylla along the edges of Mt. Banahaw de Nagcarlan, a protected area on Luzon Island, Philippines. The study also sought to identify the management strategies being implemented by various government institutions to address big leaf mahogany and other invasive plants. A total of 1591 individuals of S. macrophylla were documented in mixed land-use areas and roadsides. These were found to have been introduced by the Department of Environment and Natural Resources in 1991 as a reforestation species. Fortunately, no individuals were observed beyond the buffer zone towards the protected area. The identification of management strategies for big leaf mahogany and other IAPS revealed that there is no established approach specifically addressing the presence of S. macrophylla at the site. However, some institutions advocate for the conservation of native plants through tree planting activities and educational campaigns. Furthermore, no collaborative efforts were observed among stakeholders and institutions. The results of this study highlight the urgent need to manage the S. macrophylla population. Planning and enforcement of strategies require collaborative efforts among stakeholders to prevent its entry into the protected area and ensure the preservation of native biodiversity. Full article
(This article belongs to the Special Issue Invasive Species in Botanical and Zoological Gardens)
Show Figures

Figure 1

Figure 1
<p>Location map of the study site.</p>
Full article ">Figure 2
<p>Spatial distribution map of all size classes of <span class="html-italic">S. macrophylla</span> populations.</p>
Full article ">Figure 3
<p>Spatial distribution map of <span class="html-italic">S. macrophylla</span> adult populations.</p>
Full article ">Figure 4
<p>Spatial distribution map of <span class="html-italic">S. macrophylla</span> pole populations.</p>
Full article ">Figure 5
<p>Spatial distribution map of <span class="html-italic">S. macrophylla</span> sapling populations.</p>
Full article ">Figure 6
<p>Spatial distribution map of <span class="html-italic">S. macrophylla</span> seedling populations.</p>
Full article ">
10 pages, 1164 KiB  
Article
Cytotoxic Evaluation and Elucidation of Dammarane-Type Triterpenoids Isolated from the Exocarp of Aglaia cucullata (Meliaceae)
by Purnama, Intan Hawina Anjari, Kindi Farabi, Dudi Runadi, Tri Mayanti, Nurlelasari, Al Arofatus Naini, Desi Harneti, Harizon, Hadi Kuncoro, Thomas A. K. Prescott, Mohamad Nurul Azmi and Unang Supratman
Sustainability 2023, 15(18), 13565; https://doi.org/10.3390/su151813565 - 11 Sep 2023
Viewed by 1630
Abstract
Aglaia cucullata is a mangrove plant with a tropical Asian distribution. It is used as traditional medicine for the treatment of diarrhea, inflammation, skin diseases, and heart diseases. Several compounds isolated from A. cucullata have demonstrated cytotoxic activity against various human cancer cells. [...] Read more.
Aglaia cucullata is a mangrove plant with a tropical Asian distribution. It is used as traditional medicine for the treatment of diarrhea, inflammation, skin diseases, and heart diseases. Several compounds isolated from A. cucullata have demonstrated cytotoxic activity against various human cancer cells. Cancer therapies such as surgery, chemo-, and radiotherapy have many side effects. However, the use of natural bioactive compounds such as triterpenoid in cancer treatment can be used as an alternative to reduce these side effects. Therefore, the discovery of bioactive compounds from plants is very important to improve aspects of discovery and development of sustainable new anticancer drug candidates. Here, we report the chemical structures of seven known dammarane-type triterpenoids (17) isolated from A. cucullata exocarp and evaluate their cytotoxicity against B16-F10 melanoma skin cancer cells. The isolated compounds included cabraleahydroxylactone 3α-acetate (1), (20S)-20-hydroxydammar,24-en-3α-ol (2), (20S)-20-hydroxydammar,24-en-3-on (3), methyl 20(S)-hydroxy-3,4-secodammar-4(28),24-diene-3-oic acid (4), 3-epi ocotillol II (5), cabraleone (6), and ocotillone (7). The n-hexane extract was found to be active against B16-F10 cells, exhibiting an IC50 value of 7.85 ± 0.22 µg/mL. Fractionation of this extract subsequently identified the compound (20S)-20-hydroxydammar 24-en-3-on (3) as an active substance with an IC50 value of 21.55 ± 0.25 µM, comparing favorably with the positive control cisplatin (12.90 µg/mL; 43.00 µM). These results provide further evidence of the genus Aglaia as a source of cytotoxic cancer drug leads. In addition, compound 3 has potential as a convincing therapeutic agent for further research in the context of sustainable drug development, especially the development of new safe cancer chemotherapeutic agents. Full article
(This article belongs to the Section Environmental Sustainability and Applications)
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Structure of compounds <b>1</b>–<b>7</b> isolated from the exocarp of <span class="html-italic">A. cucullata</span>: cabraleahydroxylactone 3α-acetate (<b>1</b>), (20<span class="html-italic">S</span>)-20-hydroxydammar,24-en-3α-ol (<b>2</b>), (20<span class="html-italic">S</span>)-20-hydroxydammar,24-en-3-on (<b>3</b>), methyl 20(<span class="html-italic">S</span>)-hydroxy-3,4 secodammar-4(28),24-diene-3-oic acid (<b>4</b>), 3-epi ocotillol II (<b>5</b>), cabraleone (<b>6</b>), and ocotillone (<b>7</b>).</p>
Full article ">Figure 2
<p>Selected HMBC and <sup>1</sup>H-<sup>1</sup>H COSY correlations for <b>1</b>, <b>2</b>, <b>5</b>, and <b>6</b>.</p>
Full article ">
16 pages, 11060 KiB  
Article
Antibacterial Properties of Methanolic Leaf Extracts of Melia azedarach L. against Gram-Positive and Gram-Negative Pathogenic Bacteria
by Soraya Naila Touzout, Abderrahmen Merghni, Aicha Laouani, Halima Boukhibar, Rawaf Alenazy, Abdulmohsen Alobaid, Mustafa Alenazy, Mossadok Ben-Attia, Khaled Saguem and Safia El-Bok
Microorganisms 2023, 11(8), 2062; https://doi.org/10.3390/microorganisms11082062 - 11 Aug 2023
Cited by 3 | Viewed by 1948
Abstract
Melia azedarach L., a Meliaceae family tree, is widely used in traditional folkloric medicine for its pharmaceutical properties. In the present study, we investigated the phytochemical composition of four methanolic leaf extracts of M. azedarach of various origins (Algeria and Tunisia) using high-performance [...] Read more.
Melia azedarach L., a Meliaceae family tree, is widely used in traditional folkloric medicine for its pharmaceutical properties. In the present study, we investigated the phytochemical composition of four methanolic leaf extracts of M. azedarach of various origins (Algeria and Tunisia) using high-performance liquid chromatography (HPLC). The antibacterial efficacy and mechanisms of action against Gram-positive and Gram-negative pathogenic microorganisms were then evaluated. Our findings revealed a presence of phenolic acids and flavonoids, such as gallic acid, chlorogenic acid, caffeic acid, hyperoside, isoquercetin, quercetin, and isorhamnetin both in Algerian and Tunisian localities, with an abundance of phenolic acids compared to flavonoids. Additionally, the studied extracts exhibit a broad spectrum of antibacterial activities, with MIC values ranging from 31.25 mg/mL to 125 mg/mL. Methanolic leaf extracts of M. azedarach from Algeria exhibited more potent biofilm eradication, with a percentage of inhibition reaching 72.17% against the S. aureus strain. Furthermore, inhibitory concentrations of tested substances, particularly the extract from the Relizane area, were capable of disrupting the membrane integrity of the treated bacteria as well as producing oxidative stress through ROS generation. Likewise, our results reveal that plant extract induces lipid peroxidation by raising MDA levels in comparison to untreated cells, particularly with the plant extract of Blida. M. azedarach extracts also reduced the synthesis of antioxidant enzymes (CAT and SOD). Our findings illustrate that M. azedarach remains a plant with significant antibacterial potential and distinct mechanisms of action that are closely related to the origins of this specimen. Full article
(This article belongs to the Section Antimicrobial Agents and Resistance)
Show Figures

Figure 1

Figure 1
<p>HPLC−DAD chromatographic profiles of methanolic leaf extracts of <span class="html-italic">M. azedarach</span> leaves from different Tunisian (Bizerte (<b>A</b>); Sousse (<b>B</b>)) and Algerian (Relizane (<b>C</b>); Blida (<b>D</b>)) localities. Panel (<b>E</b>) (upper part of (<b>D</b>)) corresponds to a widening of the small chromatographic peaks by increasing sensitivity for retention times ranging from 30 to 50 min.</p>
Full article ">Figure 2
<p>Absorbance at 260 nm and 280 nm of <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> bacterial suspensions treated with leaf extracts of <span class="html-italic">M. azedarach</span> from various geographic zones. CTR: control. Absorbance values are expressed as mean ± SD. Comparisons of absorbances between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among the tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">Figure 2 Cont.
<p>Absorbance at 260 nm and 280 nm of <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> bacterial suspensions treated with leaf extracts of <span class="html-italic">M. azedarach</span> from various geographic zones. CTR: control. Absorbance values are expressed as mean ± SD. Comparisons of absorbances between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among the tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">Figure 3
<p>We used a DCFA-DA probe to measure the amount of intracellular ROS produced by <span class="html-italic">E. coli</span> (<b>A</b>) and <span class="html-italic">S. aureus</span> (<b>B</b>) following 24 h of exposure to leaf extracts of <span class="html-italic">M. azedarach</span>. The mean of relative fluorescence intensity ± SD was used to express the results. Comparisons of relative fluorescence between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among the tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">Figure 4
<p>Determination of the production of malondialdehyde MDA (µmol MDA/mg prot) in <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> in the presence of <span class="html-italic">M. azedarach</span> leaf extracts. CTR: control. MDA levels are expressed as mean ± SD. Comparisons of MDA rates between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">Figure 5
<p>Determination of SOD activity (SOD/mg protein) in <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> in the presence of <span class="html-italic">M. azedarach</span> leaf extracts. CTR: control. Data are reported as mean ± SD. SOD activity comparisons between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among the tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">Figure 6
<p>Determination of CAT activity (U/mg protein) in <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> in the presence of <span class="html-italic">M. azedarach</span> leaf extracts. CTR: control. Data are reported as mean ± SD. CAT activity comparisons between CTR and <span class="html-italic">E. coli</span> or <span class="html-italic">S. aureus</span> treated with leaf extracts from each studied region were performed using the unpaired two-tailed Student’s <span class="html-italic">t</span>-test. Significant differences among the tested groups are indicated by different letters. <sup>a</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">E. coli</span> values are significantly different from CTR; <sup>b</sup><span class="html-italic">p</span> &lt; 0.001: <span class="html-italic">S. aureus</span> values are significantly different from CTR.</p>
Full article ">
Back to TopTop