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9 pages, 673 KiB  
Brief Report
Inverse Shifting-PCR Modified by Capillary Electrophoresis for Detecting F8 int22h and int1h Inversions in Severe Hemophilia A Patients and Probable Carriers
by Rosa Michel Martínez-Contreras, Silvia Sofía García-López, Hilda Luna-Záizar and Ana Rebeca Jaloma-Cruz
Life 2024, 14(10), 1332; https://doi.org/10.3390/life14101332 (registering DOI) - 18 Oct 2024
Abstract
Globally, intron 22 inversions (Inv22s) of the factor VIII gene (F8) are the most frequent pathogenic variants and account for 45–50% of severe hemophilia A (SHA) cases, while intron 1 inversion (Inv1) explains 1–5% of SHA cases. The detection of both inversions by [...] Read more.
Globally, intron 22 inversions (Inv22s) of the factor VIII gene (F8) are the most frequent pathogenic variants and account for 45–50% of severe hemophilia A (SHA) cases, while intron 1 inversion (Inv1) explains 1–5% of SHA cases. The detection of both inversions by an inverse shifting-polymerase chain reaction (IS-PCR) is the first choice worldwide for the diagnosis of patients and carriers of SHA. To improve its sensitivity and reproducibility in the visualization of PCR products, we approached the IS-PCR with fluorescent capillary electrophoresis instead of agarose electrophoresis. Based on the original protocol, we modified two primers by 5’-end labeling with FAM™ fluorescent dye for the detection of the PCR products by capillary electrophoresis. Additionally, the “fast enzymes” BclI and T4-Ligase were incorporated for work saving in the genomic digestion and ligation reactions, respectively. Once we accomplished the standardization and verified the reproducibility of the modified IS-PCR method, we applied it for the diagnosis of a cohort of SHA patients and carriers. The modified IS-PCR by fluorescent capillary electrophoresis for PCR product detection is more sensitive than agarose electrophoresis. The method was also improved by using the new rapid enzymes to save time in the whole process. Full article
(This article belongs to the Special Issue Hemophilia)
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Graphical abstract

Graphical abstract
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<p>Genotyping of Inv22 (<b>A</b>) and Inv1 (<b>B</b>) by IS-PCR contrasting the results of agarose gels and fluorescent capillary electrophoresis. Gel agarose pictures were taken from a previous study by our group, Luna-Záizar et al., 2018 [<a href="#B7-life-14-01332" class="html-bibr">7</a>] and from non-published results, based on the protocol of Rossetti et al., 2008 [<a href="#B9-life-14-01332" class="html-bibr">9</a>]. The panel numbers of the PCR products observed as fluorescent peaks represent similar genotyping results to the corresponding diagnosed cases in the agarose gel. The PCR products are observed as peaks 5′-end-labeled in blue by 56-FAM™ and the molecular ladder (minor peaks) is labeled in orange by 500 LIZ™; fragment sizes are indicated in base pairs (bp).</p>
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17 pages, 3267 KiB  
Article
Dietary Probiotic Pediococcus acidilactici GKA4, Dead Probiotic GKA4, and Postbiotic GKA4 Improves Cisplatin-Induced AKI by Autophagy and Endoplasmic Reticulum Stress and Organic Ion Transporters
by Jaung-Geng Lin, Wen-Ping Jiang, You-Shan Tsai, Shih-Wei Lin, Yen-Lien Chen, Chin-Chu Chen and Guan-Jhong Huang
Nutrients 2024, 16(20), 3532; https://doi.org/10.3390/nu16203532 - 18 Oct 2024
Abstract
Background/Objectives: Acute kidney injury (AKI) syndrome is distinguished by a quick decline in renal excretory capacity and usually diagnosed by the presence of elevated nitrogen metabolism end products and/or diminished urine output. AKI frequently occurs in hospital patients, and there are no existing [...] Read more.
Background/Objectives: Acute kidney injury (AKI) syndrome is distinguished by a quick decline in renal excretory capacity and usually diagnosed by the presence of elevated nitrogen metabolism end products and/or diminished urine output. AKI frequently occurs in hospital patients, and there are no existing specific treatments available to diminish its occurrence or expedite recovery. For an extended period in the food industry, Pediococcus acidilactici has been distinguished by its robust bacteriocin production, effectively inhibiting pathogen growth during fermentation and storage. Methods: In this study, the aim is to assess the effectiveness of P. acidilactici GKA4, dead probiotic GKA4, and postbiotic GKA4 against cisplatin-induced AKI in an animal model. The experimental protocol involves a ten-day oral administration of GKA4, dead probiotic GKA4, and postbiotic GKA4 to mice, with a cisplatin intraperitoneal injection being given on the seventh day to induce AKI. Results: The findings indicated the significant alleviation of the renal histopathological changes and serum biomarkers of GKA4, dead probiotic GKA4, and postbiotic GKA4 in cisplatin-induced nephrotoxicity. GKA4, dead probiotic GKA4, and postbiotic GKA4 elevated the expression levels of HO-1 and decreased the expression levels of Nrf-2 proteins. In addition, the administration of GKA4, dead probiotic GKA4, and postbiotic GKA4 significantly reduced the expression of apoptosis-related proteins (Bax, Bcl-2, and caspase 3), autophagy-related proteins (LC3B, p62, and Beclin1), and endoplasmic reticulum (ER) stress-related proteins (GRP78, PERK, ATF-6, IRE1, CHOP, and Caspase 12) in kidney tissues. Notably, GKA4, dead probiotic GKA4, and postbiotic GKA4 also upregulated the levels of proteins related to organic anion transporters and organic cation transporters. Conclusions: Overall, the potential therapeutic benefits of GKA4, dead probiotic GKA4, and postbiotic GKA4 are significant, particularly after cisplatin treatment. This is achieved by modulating apoptosis, autophagy, ER stress, and transporter proteins to alleviate oxidative stress. Full article
(This article belongs to the Special Issue What Is Proper Nutrition for Kidney Diseases?)
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Figure 1
<p>The experimental framework (<b>A</b>) and the renoprotective efficacy of GKA4, dead probiotic GKA4, and postbiotic GKA4 alleviates neurotoxicity induced by cisplatin treatment. Oral administration of GKA4, dead probiotic GKA4, and postbiotic GKA4 at 250 mg/kg was carried out daily for 10 consecutive days, with cisplatin being administered one hour after the seventh dose. The sacrifice of the mice occurred on the eleventh day. The levels of BUN (<b>B</b>) and CRE in the serum (<b>C</b>), the renal sections stained with H&amp;E (400×) (<b>D</b>), and the renal injury scale (<b>E</b>) were assessed. Means ± S.E.M (<span class="html-italic">n</span> = 5) are shown in the presentation of the data. Statistical significance (<span class="html-italic">p</span> &lt; 0.001) is indicated by <sup>###</sup> when compared with the control group sample. Statistical significance at *** <span class="html-italic">p</span> &lt; 0.001 was evident in contrast to the cisplatin group.</p>
Full article ">Figure 1 Cont.
<p>The experimental framework (<b>A</b>) and the renoprotective efficacy of GKA4, dead probiotic GKA4, and postbiotic GKA4 alleviates neurotoxicity induced by cisplatin treatment. Oral administration of GKA4, dead probiotic GKA4, and postbiotic GKA4 at 250 mg/kg was carried out daily for 10 consecutive days, with cisplatin being administered one hour after the seventh dose. The sacrifice of the mice occurred on the eleventh day. The levels of BUN (<b>B</b>) and CRE in the serum (<b>C</b>), the renal sections stained with H&amp;E (400×) (<b>D</b>), and the renal injury scale (<b>E</b>) were assessed. Means ± S.E.M (<span class="html-italic">n</span> = 5) are shown in the presentation of the data. Statistical significance (<span class="html-italic">p</span> &lt; 0.001) is indicated by <sup>###</sup> when compared with the control group sample. Statistical significance at *** <span class="html-italic">p</span> &lt; 0.001 was evident in contrast to the cisplatin group.</p>
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<p>GKA4, dead probiotic GKA4, and postbiotic GKA4 alleviate oxidative stress in cisplatin-challenged AKI. The levels of MDA (<b>A</b>) and GSH (<b>B</b>) were assessed through specific assays for MDA and GSH. Means ± S.E.M (<span class="html-italic">n</span> = 5) are shown in the presentation of the data. Statistical significance (<span class="html-italic">p</span> &lt; 0.001) is indicated by <sup>###</sup> when compared with the control group sample. *** <span class="html-italic">p</span> &lt; 0.001 compared with the cisplatin group.</p>
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<p>The effects of GKA4, dead probiotic GKA4, and postbiotic GKA4 on cisplatin-induced protein expression, including that of HO-1 and Nrf2, were investigated in kidney tissues. The expression of HO-1 and Nrf2 proteins in renal homogenates was assessed via Western blot analysis after exposure to cisplatin. Densitometric analysis was employed to assess the protein bands. The experiments were conducted independently at least three times and representative images were presented.</p>
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<p>GKA4, dead probiotic GKA4, and postbiotic GKA4 administration resulted in changes in the expression levels of Bax, Bcl-2, and caspase-3 proteins after exposure to cisplatin. Antibodies specific to Bax, Bcl-2, caspase-3, and β-actin were used to conduct a Western blot analysis on kidney tissue lysates. A densitometric analysis was employed to assess the protein bands. The experiments were conducted independently at least three times, and representative images were presented.</p>
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<p>GKA4, dead probiotic GKA4, and postbiotic GKA4 resulted in a reduction in the levels of LC3B, P62, and Beclin 1 protein following exposure to cisplatin. Antibodies specific to LC3B, P62, Beclin 1, and β-actin were employed for a Western blot analysis of kidney tissue lysates. Protein bands were analyzed via densitometric analysis. The experiments were replicated at least three times, and representative images were displayed.</p>
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<p>GKA4, dead probiotic GKA4, and postbiotic GKA4 modulated the expression of ER stress proteins in mice with cisplatin-induced AKI. A Western blot analysis was performed on kidney tissue lysates to evaluate protein expression using antibodies specific to GRP78, PERK, ATF-6, IRE1, CHOP, and caspase 12. Densitometric analysis was employed to assess the protein bands. The experiments were conducted independently at least three times, and representative images were presented.</p>
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<p>GKA4, dead probiotic GKA4, and postbiotic GKA4 regulated renal transporter expressions following exposure to cisplatin in mice. A Western blot analysis was performed on kidney tissue lysates to evaluate protein expression using antibodies specific to OAT1, OAT3, OCT3, and MATE1. A densitometric analysis was employed to assess the protein bands. The experiments were conducted independently at least three times, and representative images were presented.</p>
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15 pages, 15159 KiB  
Article
Apoptosis, Mitochondrial Autophagy, Fission, and Fusion Maintain Mitochondrial Homeostasis in Mouse Liver Under Tail Suspension Conditions
by Lu-Fan Li, Jiao Yu, Rui Li, Shan-Shan Li, Jun-Yao Huang, Ming-Di Wang, Li-Na Jiang, Jin-Hui Xu and Zhe Wang
Int. J. Mol. Sci. 2024, 25(20), 11196; https://doi.org/10.3390/ijms252011196 - 18 Oct 2024
Viewed by 166
Abstract
Microgravity can induce alterations in liver morphology, structure, and function, with mitochondria playing an important role in these changes. Tail suspension (TS) is a well-established model for simulating the effects of microgravity on muscles and bones, but its impact on liver function remains [...] Read more.
Microgravity can induce alterations in liver morphology, structure, and function, with mitochondria playing an important role in these changes. Tail suspension (TS) is a well-established model for simulating the effects of microgravity on muscles and bones, but its impact on liver function remains unclear. In the current study, we explored the regulatory mechanisms of apoptosis, autophagy, fission, and fusion in maintaining liver mitochondrial homeostasis in mice subjected to TS for 2 or 4 weeks (TS2 and TS4). The results showed the following: (1) No significant differences were observed in nuclear ultrastructure or DNA fragmentation between the control and TS-treated groups. (2) No significant differences were detected in the mitochondrial area ratio among the three groups. (3) Cysteine aspartic acid-specific protease 3 (Caspase3) activity and the Bcl-2-associated X protein (bax)/B-cell lymphoma-2 (bcl2) ratio were not higher in the TS2 and TS4 groups compared to the control group. (4) dynamin-related protein 1 (DRP1) protein expression was increased, while mitochondrial fission factor (MFF) protein levels were decreased in the TS2 and TS4 groups compared to the control, suggesting stable mitochondrial fission. (5) No significant differences were observed in the optic atrophy 1 (OPA1), mitofusin 1 and 2 (MFN1 and MFN2) protein expression levels across the three groups. (6) Mitochondrial autophagy vesicles were present in the TS2 and TS4 groups, with a significant increase in Parkin phosphorylation corresponding to the duration of the TS treatment. (7) ATP synthase and citrate synthase activities were significantly elevated in the TS2 group compared to the control group but were significantly reduced in the TS4 group compared to the TS2 group. In summary, the coordinated regulation of apoptosis, mitochondrial fission and fusion, and particularly mitochondrial autophagy preserved mitochondrial morphology and contributed to the restoration of the activities of these two key mitochondrial enzymes, thereby maintaining liver mitochondrial homeostasis in mice under TS conditions. Full article
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Figure 1
<p>Influence of TS on morphological data in mice. Numerical values are mean ± standard deviation. n = 8. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group. ** <span class="html-italic">p</span> &lt; 0.01 and * <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Histological morphology of mouse liver under different TS treatments. (<b>a</b>) Scale = 100 μm. (<b>b</b>) Scale = 20 μm. Arrows point to hepatocytes. Dashed arrows point to sinusoids. # shows vasculature. Cells within square boxes are necrotic liver cells. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group.</p>
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<p>Ultrastructure of mouse liver tissue and analysis of mitochondrial number and area under different TS treatments. (<b>a</b>) Scale = 1 μm. * shows mitochondrial autophagic vesicles. Arrows point to mitochondria. (<b>b</b>) Scale = 10 μm. # shows liver nucleus. Arrows point to mitochondria. (<b>c</b>) Number of mitochondria. (<b>d</b>) Mitochondrial cross-sectional area. (<b>e</b>) Mitochondrial area ratio. Numerical values are mean ± standard deviation. Fifteen pictures were analyzed in each group. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group. ** <span class="html-italic">p</span> &lt; 0.01 and * <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Activities of ATP synthase (<b>a</b>), CS (<b>b</b>), and Caspase3 (<b>c</b>) in mouse liver under different TS treatments. Numerical values are mean ± standard deviation. n = 8. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group. ** <span class="html-italic">p</span> &lt; 0.01.</p>
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<p>TUNEL staining of mouse liver under different TS treatments. (<b>a</b>) Scale = 20 μm. Arrows point to DNA fragmentation. Blue fluorescence indicates nuclei; green fluorescence indicates DNA fragmentation. (<b>b</b>) Negative control for TUNEL staining of mouse liver. Scale = 20 μm. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group.</p>
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<p>Expression levels of liver apoptosis-associated proteins in mice under different TS treatments. (<b>a</b>) Representative Western blot gels. (<b>b</b>) Polyacrylamide gel of total protein. (<b>c</b>) Apoptosis-associated protein level. Numerical values are mean ± standard deviation. n = 8. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group. * <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Expression levels of mitochondrial fission- and fusion-associated proteins in mice liver mitochondria under different TS treatments. (<b>a</b>) Representative Western blot gels. (<b>b</b>) Polyacrylamide gel of total protein in the liver. (<b>c</b>) Mitochondrial fission-associated protein levels. (<b>d</b>) Expression levels of mitochondrial fusion-associated proteins. Numerical values are mean ± standard deviation. n = 8. CON, control group; TS2, tail suspension 2-week group; and TS4, tail suspension 4-week group. * <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Expression levels of autophagy-associated proteins in mouse liver mitochondria under different TS treatments. (<b>a</b>) Representative Western blot gels. (<b>b</b>) Polyacrylamide gel of total protein. (<b>c</b>) Mitochondrial autophagy-associated protein levels. Numerical values are mean ± standard deviation. n = 8. ** <span class="html-italic">p</span> &lt; 0.01 and * <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Summary of impact of TS on liver mitochondrial homeostasis in mice. bcl2, B-cell lymphoma-2; bax, Bcl-2-associated X protein; caspase3, cysteine aspartic acid-specific protease 3; MFN1, mitofusin 1; MFN2, mitofusin 2; OPA1, optic atrophy 1; MFF, mitochondrial fission factor; DRP1, dynamin-related protein 1; Parkin, Parkinson disease protein 2; P-Parkin, phosphorylated Parkin; ATP synthase, adenosine triphosphate synthase; and CS, citrate synthase. Yellow represents apoptosis-related proteins. Gray represents mitochondrial fusion-related proteins. Pink represents mitochondrial fission-related proteins. Green represents mitochondrial autophagy-related proteins. Blue represents oxidative phosphorylation-related proteins. Red arrows represent up- or down-regulation in TS2 group. Blue arrows represent up- or down-regulation in TS4 group.</p>
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49 pages, 1213 KiB  
Review
Molecular Biomarkers in Prediction of High-Grade Transformation and Outcome in Patients with Follicular Lymphoma: A Comprehensive Systemic Review
by Marie Hairing Enemark, Jonas Klejs Hemmingsen, Maja Lund Jensen, Robert Kridel and Maja Ludvigsen
Int. J. Mol. Sci. 2024, 25(20), 11179; https://doi.org/10.3390/ijms252011179 - 17 Oct 2024
Viewed by 216
Abstract
Follicular lymphoma (FL) is the most prevalent indolent B-cell lymphoma entity, often characterized by the t(14;18) BCL2-IGH translocation. The malignancy represents a clinically and biologically highly heterogeneous disease. Most patients have favorable prognoses; however, despite therapeutic advancements, the disease remains incurable, with recurrent [...] Read more.
Follicular lymphoma (FL) is the most prevalent indolent B-cell lymphoma entity, often characterized by the t(14;18) BCL2-IGH translocation. The malignancy represents a clinically and biologically highly heterogeneous disease. Most patients have favorable prognoses; however, despite therapeutic advancements, the disease remains incurable, with recurrent relapses or early disease progression. Moreover, transformation to an aggressive histology, most often diffuse large-B-cell lymphoma, remains a critical event in the disease course, which is associated with poor outcomes. Understanding the individual patient’s risk of transformation remains challenging, which has motivated much research on novel biomarkers within the past four decades. This review systematically assessed the research on molecular biomarkers in FL transformation and outcome. Following the PRISMA guidelines for systemic reviews, the PubMed database was searched for English articles published from January 1984 through September 2024, yielding 6769 results. The identified publications were carefully screened and reviewed, of which 283 original papers met the inclusion criteria. The included studies focused on investigating molecular biomarkers as predictors of transformation or as prognostic markers of time-related endpoints (survival, progression, etc.). The effects of each biomarker were categorized based on their impact on prognosis or risk of transformation as none, favorable, or inferior. The biomarkers included genetic abnormalities, gene expression, microRNAs, markers of B cells/FL tumor cells, markers of the tumor microenvironment, and soluble biomarkers. This comprehensive review provides an overview of the research conducted in the past four decades, underscoring the persistent challenge in risk anticipation of FL patients. Full article
(This article belongs to the Section Molecular Oncology)
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<p><bold>PRISMA flow diagram.</bold> The search strategy for the present review. * Review papers, case reports, studies of a non-FL study population, studies of relapse/refractory FL, studies of non-human tissues (i.e., animal models, cell line studies), studies with no molecular biomarkers evaluated, and otherwise irrelevant papers were excluded.</p>
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22 pages, 8453 KiB  
Article
Efficacy of Quercetin and Quercetin Loaded Chitosan Nanoparticles Against Cisplatin-Induced Renal and Testicular Toxicity via Attenuation of Oxidative Stress, Inflammation, and Apoptosis
by Alaa F. Bakr, Riham A. El-Shiekh, Mohamed Y. Mahmoud, Heba M. A. Khalil, Mohammad H. Alyami, Hamad S. Alyami, Omneya Galal and Dina F. Mansour
Pharmaceuticals 2024, 17(10), 1384; https://doi.org/10.3390/ph17101384 - 17 Oct 2024
Viewed by 247
Abstract
Background/Objectives: Flavonoids, including quercetin, have attracted much attention due to their potential health-promoting effects. Methods: The current experiment aims to see whether quercetin (QUE) in nanoparticle form could mitigate testicular and renal toxicity caused by cisplatin (CIS) more effectively than normally formulated QUE. [...] Read more.
Background/Objectives: Flavonoids, including quercetin, have attracted much attention due to their potential health-promoting effects. Methods: The current experiment aims to see whether quercetin (QUE) in nanoparticle form could mitigate testicular and renal toxicity caused by cisplatin (CIS) more effectively than normally formulated QUE. Rats were randomly treated with CIS alone or in combination with QUE or QUE.NPs (Quercetin-loaded chitosan nanoparticles) for 4 weeks. QUE and QUE.NPs were given orally (10 mg/kg, three times a week), while CIS was given intraperitoneally (2 mg/kg, twice a week). Results: Compared to QUE- and CIS + QUE.NP-treated rats, CIS exposure induced anxiety and emotional stress as well as promoted oxidative stress in both testicular and renal tissues. Moreover, CIS reduced serum testosterone levels and diminished testicular IL-10, as well as CIS-induced renal failure, as indicated by hypokalemia, and increased levels of creatinine, urea, sodium, IL-18, and KIM-1. Further, severe histological changes were observed in the testis and kidney of CIS-intoxicated rats. Regarding immunohistochemical staining, CIS significantly upregulated Bax, downregulated Bcl-2, and moderately enhanced PCNA expression. Conclusions: Our findings suggest that both QUE and QUE.NPs modulated emotional disturbance and improved testicular and renal functions via modulation of oxidation, inflammation, and apoptosis. However, QUE.NPs performed better than QUE-treated rats. Full article
(This article belongs to the Section Pharmacology)
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<p>(<b>a</b>) SEM images of QUE.NPs. The scale bar represents 200 nm. Images represent at least three independent samples, with n &gt; 500 NPs. (<b>b</b>) Cumulative release of quercetin from chitosan NPs over a 24 hr period. Data are presented as mean ± SD (n = 3).</p>
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<p>Effect of quercetin and its nanoform on the emotional behavior of cisplatin-intoxicated rats. (<b>a</b>) Open field test: number of crossing squares; (<b>b</b>) open field test: rearing frequency; (<b>c</b>) dark–light activity box: dark chamber duration %; and (<b>d</b>) dark–light activity box: light chamber duration %. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001, **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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<p>Effect of quercetin and its nanoform on oxidative stress induced by cisplatin in renal and testicular tissue of rats. (<b>a</b>) testicular MDA levels, (<b>b</b>) renal MDA levels, (<b>c</b>) testicular GSH levels, (<b>d</b>) renal GSH levels, (<b>e</b>) testicular SOD levels, and (<b>f</b>) renal SOD levels. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>QUE and QUE.NPs mitigate cisplatin-induced reduction in serum testosterone and testicular IL-10. (<b>a</b>) serum testosterone level; (<b>b</b>) testicular IL-10 level. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>Evaluation of sperm count, viability, and morphology. (<b>a</b>) sperm count; (<b>b</b>) sperm viability; (<b>c</b>) sperm abnormality. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001, and **** <span class="html-italic">p</span> &lt; 0.0001.</p>
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<p>Quercetin and its nanoform amend renal interleukin-18 (IL-18) and kidney injury molecule-1 (KIM-1). (<b>a</b>) renal IL-18 level; (<b>b</b>) renal KIM-1 level. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>QUE and its nanoform attenuate CIS-induced apoptosis and promote cellular regeneration. (<b>a</b>) control group; (<b>b</b>) QUE group; (<b>c</b>) QUE.NPs group; (<b>d</b>) CIS group; (<b>e</b>) CIS + QUE group; (<b>f</b>) CIS + QUE.NPs group; (<b>g</b>) testicular damage score (Cosentino’s grade); (<b>h</b>) spermatogenesis score (Johnsen’s scoring); (<b>i</b>) kidney damage score. Data are expressed as median ± SEM. Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001. Remarkable marks shown in the figure are as follows: oligospermia (blue arrow), spermatid giant cells (arrowhead), interstitial nephritis (black arrow), and tubular dilatation with complete renal epithelial necrosis (curved arrow).</p>
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<p>Immunohistochemical staining of testicular tissue with Bax and Bcl-2. (<b>a</b>) control group; (<b>b</b>) QUE group; (<b>c</b>) QUE.NPs group; (<b>d</b>) CIS group; (<b>e</b>) CIS + QUE group; (<b>f</b>) CIS + QUE.NPs group; (<b>g</b>) Bax (area%); (<b>h</b>) Bcl-2 (area%); (<b>i</b>) Bax/Bcl-2 ratio. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001. Remarkable marks shown in the figure are as follows: strong expression (curved arrow) and weak expression (black arrow).</p>
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<p>Immunohistochemical staining of renal tissue with Bax and Bcl-2. (<b>a</b>) control group; (<b>b</b>) QUE group; (<b>c</b>) QUE.NPs group; (<b>d</b>) CIS group; (<b>e</b>) CIS + QUE group; (<b>f</b>) CIS + QUE.NPs group; (<b>g</b>) Bax (area%); (<b>h</b>) Bcl-2 (area%); (<b>i</b>) Bax/Bcl-2 ratio. Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001. Remarkable marks shown in the figure are as follows: strong expression (curved arrow) and weak expression (black arrow).</p>
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<p>Immunohistochemical staining of renal and testicular tissue with PCNA. (<b>a</b>) control group; (<b>b</b>) QUE group; (<b>c</b>) QUE.NPs group; (<b>d</b>) CIS group; (<b>e</b>) CIS + QUE group; (<b>f</b>) CIS + QUE.NPs group; (<b>g</b>) renal PCNA (area%); (<b>h</b>) testicular PCNA (area%); Data are expressed as mean ± SEM (n = 7). Statistical difference: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001. Remarkable marks shown in the figure are as follows: strong expression (curved arrow) and weak expression (black arrow).</p>
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<p>Modulation of oxidative stress and apoptotic pathways of CIS by quercetin. ROS, reactive oxygen species, and GSH, glutathione; MDA, malondialdehyde; SOD, superoxide dismutase; IL, interleukin; Casp–3, caspase 3; Bax, BCL–2-associated X protein; Bcl-2, B-cell lymphoma 2; TNF–α, tumor necrosis factor α; NF–κB, nuclear factor κB.</p>
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21 pages, 6102 KiB  
Article
Mechanisms of Action of Sea Cucumber Triterpene Glycosides Cucumarioside A0-1 and Djakonovioside A Against Human Triple-Negative Breast Cancer
by Ekaterina S. Menchinskaya, Ekaterina A. Chingizova, Evgeny A. Pislyagin, Ekaterina A. Yurchenko, Anna A. Klimovich, Elena. A. Zelepuga, Dmitry L. Aminin, Sergey A. Avilov and Alexandra S. Silchenko
Mar. Drugs 2024, 22(10), 474; https://doi.org/10.3390/md22100474 - 17 Oct 2024
Viewed by 212
Abstract
Breast cancer is the most prevalent form of cancer in women worldwide. Triple-negative breast cancer is the most unfavorable for patients, but it is also the most sensitive to chemotherapy. Triterpene glycosides from sea cucumbers possess a high therapeutic potential as anticancer agents. [...] Read more.
Breast cancer is the most prevalent form of cancer in women worldwide. Triple-negative breast cancer is the most unfavorable for patients, but it is also the most sensitive to chemotherapy. Triterpene glycosides from sea cucumbers possess a high therapeutic potential as anticancer agents. This study aimed to identify the pathways triggered and regulated in MDA-MB-231 cells (triple-negative breast cancer cell line) by the glycosides cucumarioside A0-1 (Cuc A0-1) and djakonovioside A (Dj A), isolated from the sea cucumber Cucumaria djakonovi. Using flow cytometry, fluorescence microscopy, immunoblotting, and ELISA, the effects of micromolar concentrations of the compounds on cell cycle arrest, induction of apoptosis, the level of reactive oxygen species (ROS), mitochondrial membrane potential (Δψm), and expression of anti- and pro-apoptotic proteins were investigated. The glycosides caused cell cycle arrest, stimulated an increase in ROS production, and decreased Δψm in MDA-MB-231 cells. The depolarization of the mitochondrial membrane caused by cucumarioside A0-1 and djakonovioside A led to an increase in the levels of APAF-1 and cytochrome C. This, in turn, resulted in the activation of caspase-9 and caspase-3 and an increase in the level of their cleaved forms. Glycosides also affected the expression of Bax and Bcl-2 proteins, which are associated with mitochondria-mediated apoptosis in MDA-MB-231 cells. These results indicate that cucumarioside A0-1 and djakonovioside A activate the intrinsic apoptotic pathway in triple-negative breast cancer cells. Additionally, it was found that treatment with Cuc A0-1 resulted in in vivo inhibition of tumor growth and metastasis of murine solid Ehrlich adenocarcinoma. Full article
(This article belongs to the Collection Marine Compounds and Cancer)
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Graphical abstract

Graphical abstract
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<p>Chemical structures of triterpene glycosides: cucumarioside A<sub>0</sub>-1 (<b>a</b>) and djakonovioside A (<b>b</b>) isolated from the sea cucumber <span class="html-italic">Cucumaria djakonovi</span>.</p>
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<p>Distribution of MDA-MB-231 cells according to the phases of the cell cycle after treatment with various concentrations of Cuc A<sub>0</sub>-1 and Dj A for 24 h.</p>
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<p>Visualization of cyclin B and A contents and cyclin-dependent kinases in MDA-MB-231 cells treated with triterpene glycosides Cuc A<sub>0</sub>-1 and Dj A at different concentrations. Representative Western blot membranes showing the effect of glycosides on cyclin and CDK protein expression levels (<b>a</b>). Processed data on cyclin B content in MDA-MB-231 cells treated with Cuc A<sub>0</sub>-1 (<b>b</b>). Processed data on cyclin A content in MDA-MB-231 cells treated with Dj A (<b>c</b>). Processed data on CDK-1 content in MDA-MB-231 cells treated with Cuc A<sub>0</sub>-1 (<b>d</b>). Processed data on CDK-2 content in MDA-MB-231 cells treated with Dj A (<b>e</b>). All data were normalized to the β-actin levels. Data are presented as means ± SEM. * <span class="html-italic">p</span> value &lt; 0.05 was considered significant.</p>
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<p>Analysis of apoptosis induced by triterpene glycosides in MDA-MB-231 cells after 24 h of incubation. Flow cytometry assay for Annexin V-FITC/PI staining (<b>a</b>). Quantitative calculation of the data obtained via flow cytometry: Cuc A<sub>0</sub>-1 (0.5 and 1 μM)—(<b>b</b>) and Dj A (1 and 2 μM)—(<b>c</b>). Data are presented as means ± SEM. <span class="html-italic">p</span> value &lt; 0.05 was considered significant. Apoptosis assay using Hoechst 33342 in a fluorescent microscopy analysis (<b>d</b>). Hoechst 33342 staining showed an increase in chromatin condensation and DNA fragmentation in apoptotic cells treated with Cuc A<sub>0</sub>-1 (1 μM) and Dj A (2 μM) compared with untreated control cells. Arrows indicate nuclei with condensed chromatin.</p>
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<p>Quantitative evaluation of ROS levels in MDA-MB-231 cells after incubation with Cuc A<sub>0</sub>-1 (<b>a</b>) and Dj A (<b>b</b>) for different times (6, 12, and 24 h) using the fluorescent dye H<sub>2</sub>DCF-DA. Glycosides Cuc A<sub>0</sub>-1 (<b>c</b>) and Dj A (<b>d</b>), at various concentrations, reduced the mitochondrial membrane potential (Δψm), as measured using the fluorescent dye TMRE. Data are presented as means ± SEM. * <span class="html-italic">p</span> value &lt; 0.05 was considered significant. Staining of MDA-MB-231 cells with the fluorescent dye JC-1 showed a change in the mitochondrial membrane potential (<b>e</b>).</p>
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<p>Western blot analysis of cytoplasmic proteins: apoptosis promoter Bax (<b>a</b>,<b>b</b>) and apoptosis inhibitor Bcl-2 (<b>a</b>,<b>c</b>) with β-actin as a protein loading control under the treatment of MDA-MB-231 cells with different concentrations of Cuc A<sub>0</sub>-1 and Dj A. Cytoplasmic protein levels were normalized to the control group (untreated cells). * <span class="html-italic">p</span> &lt; 0.05 compared with untreated MDA-MB-231 cells.</p>
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<p>Quantitative assessment of the contents of cytochrome C (<b>a</b>,<b>b</b>) and APAF-1 (<b>c</b>,<b>d</b>) in MDA-MB-231 cells after treatment with different concentrations of glycosides Cuc A<sub>0</sub>-1 (<b>a</b>,<b>c</b>) and Dj A (<b>b</b>,<b>d</b>) at different times (6, 12, and 24 h) using ELISA kits. * <span class="html-italic">p</span> &lt; 0.05 compared with untreated MDA-MB-231 cells.</p>
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<p>Caspase-3/7 activity in the control cells and cells treated with triterpene glycosides for 12 and 24 h was measured using the Muse™ Caspase-3/7 Kit and flow cytometry in MDA-MB-231 cells.</p>
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<p>Western blot analysis of apoptotic markers (<b>a</b>) and quantitative analysis of the levels of cleaved caspase-9 (<b>b</b>), cleaved caspase-3 (<b>c</b>), and cleaved PARP-1 (<b>d</b>) in MDA-MB-231 cells treated with different concentrations of Cuc A<sub>0</sub>-1 and Dj A. β-actin was used as a protein loading control (<b>a</b>). The levels of apoptotic markers were normalized to those of the control group (untreated cells). * <span class="html-italic">p</span> &lt; 0.05 compared to untreated MDA-MB-231 cells.</p>
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<p>Influence of Cuc A<sub>0</sub>-1 on the area (<b>a</b>) and integrated density (<b>b</b>) of the fluorescence zone detected by in vivo fluorescence imager, Fluor I. Effect of Cuc A<sub>0</sub>-1 (0.4 µg/mL) on tumor volume (<b>c</b>) and tumor growth index (<b>d</b>). The data are presented as a mean ± SEM (n = 7). Asterisks indicate the significance of the differences at <span class="html-italic">p</span> ≤ 0.05 * and <span class="html-italic">p</span> ≤ 0.01 ** according to one-factor analysis of variance (ANOVA) with Tukey’s correction.</p>
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<p>The visualization of tumor cells labeled with PKH800 NIR fluorescent dye using the fluorescence imager system, “Fluor I IN VIVO”, in untreated mice (<b>a</b>), mice treated with Cuc A<sub>0</sub>-1 in group II (<b>b</b>), mice treated with Cuc A<sub>0</sub>-1 in group III (<b>c</b>), and mice treated with doxorubicin in group IV (<b>d</b>). On day 12, the tumor area was visualized in live mice; afterward, the mice were euthanized, the skin was opened, and tumor cells were visualized again. Arrows indicate tumor metastasis in the abdominal cavity.</p>
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<p>Three-dimensional plot of cytotoxic activity (pIC<sub>50</sub>) dependence on the principal component values (PCA1–PCA3) calculated for 25 conformational forms of 20 glycosides tested against MDA-MB-231 cells. The glycosides demonstrating cytotoxic activity with IC<sub>50</sub> ≤ 10 μM were outlined as active and are marked in red, while inactive glycosides are marked in violet.</p>
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<p>The PLS QSAR model correlation plot reflecting the relationship of predicted and experimental cytotoxicity of the glycosides against MDA-MB-231 cells. The cytotoxic action was expressed as pIC<sub>50</sub>.</p>
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15 pages, 2286 KiB  
Article
Difenoconazole Induced Damage of Bovine Mammary Epithelial Cells via ER Stress and Inflammatory Response
by Myoung-Jun Na, Won-Young Lee and Hyun-Jung Park
Cells 2024, 13(20), 1715; https://doi.org/10.3390/cells13201715 - 17 Oct 2024
Viewed by 187
Abstract
Difenoconazole (DIF) is a fungicide used to control various fungi. It is absorbed on the surface of different plants and contributes significantly to increased crop production. However, DIF is reported to exhibit toxicity to fungi and to aquatic plants, fish, and mammals, including [...] Read more.
Difenoconazole (DIF) is a fungicide used to control various fungi. It is absorbed on the surface of different plants and contributes significantly to increased crop production. However, DIF is reported to exhibit toxicity to fungi and to aquatic plants, fish, and mammals, including humans, causing adverse effects. However, research on the impact of DIF on the mammary epithelial cells of herbivorous bovines is limited. DIF-induced damage and accumulation in the mammary glands can have direct and indirect effects on humans. Therefore, we investigated the effects and mechanisms of DIF toxicity in MAC-T cells. The current study revealed that DIF reduces cell viability and proliferation while triggering apoptotic cell death through the upregulation of pro-apoptotic proteins, including cleaved caspase 3 and Bcl-2-associated X protein (BAX), and the downregulation of leukemia type 2 (BCL-2). DIF also induced endoplasmic reticulum (ER) stress by increasing the expression of genes or proteins of Bip/GRP78, protein disulfide isomerase (PDI), activating transcription factor 4 (ATF4), C/EBP homologous protein (CHOP), and endoplasmic reticulum oxidoreductase 1 Alpha (ERO1-Lα). We demonstrated that DIF induces mitochondria-mediated apoptosis in MAC-T cells by activating ER stress pathways. This cellular damage resulted in a significant increase in the expression of inflammatory response genes and proteins, including cyclooxygenase 2 (COX2), transforming growth factor beta 3 (TGFB3), CCAAT enhancer binding protein delta (CEBPD), and iNOS, in DIF-treated groups. In addition, spheroid formation by MAC-T cells was suppressed by DIF treatment. Our findings suggest that DIF exposure in dairy cows may harm mammary gland function and health and may indirectly affect human consumption of milk. Full article
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<p>Effects of DIF on MAC-T cells include significant impacts on both cell apoptosis and proliferation. (<b>A</b>) MAC-T cell viability through an MTT assay. Cells were treated with DIF (0–1000 µM). Data represent the mean ± SD (n = 5, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001 compared to the control). (<b>B</b>) After treating cells with DIF (0–100 μM) followed by a 24 h incubation period, the morphology of the cells was observed using a microscope, and immunostaining was performed using Ki-67 antibody. Scaler bar = 100 μM. (<b>C</b>) The graph illustrating the ratio of Ki-67-positive cells to the total cells stained with DAPI has been created for the manuscript (n = 4, ** <span class="html-italic">p</span> &lt; 0.001). (<b>D</b>) After culturing MAC-T cells with DIF at concentrations ranging from 0 to 100 μM, annexin V-FITC/PI staining was conducted. Following staining, dye-positive/negative cells were assessed using flow cytometry to determine cell death by apoptosis. (<b>E</b>) The graph depicts the proportion of apoptosis as mean ± SD based on the results of flow cytometry analysis. (n = 4, ** <span class="html-italic">p</span> &lt; 0.001).</p>
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<p>Expression levels of Pro-apoptotic protein, and mitochondrial dysfunction in DIF exposed MAC-T cell. (<b>A</b>) MAC-T cells were treated with DIF concentrations ranging from 0 to 100 μM for 24 h, followed by preparation of total protein and analysis via immunoblotting. The protein expression levels of cleaved caspase 3, caspase 3 and BAX, Bcl-2, and β-actin were evaluated in each experimental group. (<b>B</b>) The graphs display protein bands represented as quantified data normalized to β-actin as mean ± SD (n = 5, * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001). (<b>C</b>) Cells treated with DIF (0–100 μM) were cultured in a 6-well plate, followed by JC-1 staining. Red and green fluorescence were observed using fluorescence microscopy. The ratio of JC-1 green emitted at 530 nm and JC-1 red emitted at 580 nm varies depending on the change in mitochondrial membrane potential. Scale bar =100 μm. (<b>D</b>) Flow cytometry analysis was conducted for quantification of JC-1 green and red. (<b>E</b>) A graph was generated based on the decrease in the proportion predicted to be JC-1 red fluorescence (% J-monomers/J-aggregates), and data show mean ± SD. (n = 5, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001).</p>
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<p>Effects of DIF on ER stress in MAC-T cell. (<b>A</b>) qPCR analysis of CHOP, Bip/Grp78, and ATF4 expression levels following 24 h of DIF treatment. Data represent mean ± SD with log2 scales (n = 5, ** <span class="html-italic">p</span> &lt; 0.01 compared to controls). (<b>B</b>) Immunoblot analysis showing the protein levels of BiP/GRP78, ERO1-Lα, CHOP, PDI, and β-actin after DIF exposure. (<b>C</b>) Densitometric quantification of protein bands normalized to β-actin. Results are presented as the mean ± SD (n = 5, * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001).</p>
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<p>DIF induced inflammation at cultured MAC-T cell. (<b>A</b>) Immunostaining of COX2 protein in100 μM DIF treated MAC-T cells. Scale bar = 50 μM. DAPI were stained nucleus. Graph showed COX2 intensity from each group. *** <span class="html-italic">p</span> &lt; 0.001, (<b>B</b>) The relative gene expression of <span class="html-italic">Cox2, TGFB2</span>, and <span class="html-italic">CEBPD</span> in each group after 0–100 μM DIF treatment for 24 h. Graph showed mean ± SD (n = 5, ** <span class="html-italic">p</span> &lt; 0.001 compared to controls). (<b>C</b>) Protein expression of COX2, iNOS, and β-actin after 0–100 μM DIF exposure. (<b>D</b>) Graph represents each protein band normalized to β-actin as mean ± SD (n = 5, * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01 compared to controls).</p>
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<p>Effects of DIF on spheroid formation from MAC-T cells. (<b>A</b>) Morphological change in spheroid from MAC-T cell after 0–100 μM DIF treatment for 3 d. Images were captured using bright-field microscopy, with the scale bar representing = 500 μM. (<b>B</b>) GFP expressing spheroid of MAC-T cell (green fluorescent) after 0–100 DIF μM treatment. Scale bar = 500 μM. (<b>C</b>) The area of spheroid (%) from each group. Graph showed mean ± SD (** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001 compared to controls). Spheroid formation did not occur in 100 μM DIF-treated groups. (<b>D</b>) Average diameter (μm) of spheroid from each group. The diameter measurement was carried out from D1–D3. Graph showed mean ± SD (* <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, *** <span class="html-italic">p</span> &lt; 0.001 compared to controls).</p>
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20 pages, 5877 KiB  
Article
Black Carbon in Climate Studies: A Bibliometric Analysis of Research Trends and Topics
by Chao Chen, Yinglin Liang, Zhilong Chen, Changwu Zou and Zongbo Shi
Sustainability 2024, 16(20), 8945; https://doi.org/10.3390/su16208945 - 16 Oct 2024
Viewed by 455
Abstract
Black carbon is a short-lived climate warming agent and serves as a crucial factor influencing the climate. Numerous models, observations, and laboratory studies have been conducted to quantify black carbon’s direct or indirect impacts on the climate. Here, we applied bibliometric analysis to [...] Read more.
Black carbon is a short-lived climate warming agent and serves as a crucial factor influencing the climate. Numerous models, observations, and laboratory studies have been conducted to quantify black carbon’s direct or indirect impacts on the climate. Here, we applied bibliometric analysis to identify research trends and key topics on black carbon in the climate field. Based on the Web of Science (WOS) Core Collection database, a total of 4903 documents spanning the period from 2000 to 2023 were retrieved and screened, focusing on the topic of black carbon in the climate field, resulting in the Black-Carbon Climate Local (BCL) dataset. Our study examines the influence and trends of major countries, institutions, and authors in this field. The results show that China and the United States hold leading positions in terms of the number of publications. Based on keyword networks, the BCL dataset is segmented into six distinct research directions, and representative keywords of each direction include biomass burning, radiative forcing, air pollution, aerosol optical depth, optical properties, and biochar. This study helps to identify the current research status and trends of black carbon in the climate, highlighting main research directions and emerging topics. Full article
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<p>Conceptual framework of the literature retrieval methods. The asterisk (*) used as a truncation symbol used in search queries, broadening the search to include words starting with “climat”.</p>
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<p>Annual total publications from 2000 to 2023 (the black line) and annual publications of top ten countries (stacked bars).</p>
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<p>(<b>a</b>) International cooperation network, with the node size representing its total link strength, and the color representing the average citations. (<b>b</b>) Development trends in cooperation between major developed and developing countries. The green line with diamond nodes represents the proportionate link strength of USA–China to the total link strength of China, and the green line with triangular nodes represents the proportionate link strength of USA–China to the total link strength of the USA. Orange lines represent the collaboration trends between the USA and Germany, and blue lines represent those between China and India.</p>
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<p>(<b>a</b>) The yearly count of publications for the top ten institutions, (<b>b</b>) the institutional cooperation network, with the color of the links between nodes representing the time when two institutions started collaborating, and (<b>c</b>) the grouped clusters of institutions. <a href="#app1-sustainability-16-08945" class="html-app">Table S5</a> contains the full names corresponding to the institutional abbreviations.</p>
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<p>(<b>a</b>) The top ten authors by cumulative publications over time, with the size of each sphere corresponding to the number of articles, and the color intensity representing the average citation rate. (<b>b</b>) The author cooperation network, with the color of each node representing the standardized average citation of the author’s publications.</p>
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<p>(<b>a</b>) Keyword network with grouped clusters, with the node size correlated positively with the frequency of keyword occurrence, and (<b>b</b>) research trends in topics over time. Each blue sphere represents a topic, corresponding to an author keyword, with its size proportional to the keyword’s frequency of occurrence. The placement of each sphere corresponds to the median frequency distribution of the keyword’s occurrences, and the grey bars represent the first and third quartiles of the frequency distribution.</p>
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<p>Network graph of the top 5 review articles and the top 25 articles in terms of citations [<a href="#B1-sustainability-16-08945" class="html-bibr">1</a>,<a href="#B2-sustainability-16-08945" class="html-bibr">2</a>,<a href="#B6-sustainability-16-08945" class="html-bibr">6</a>,<a href="#B11-sustainability-16-08945" class="html-bibr">11</a>,<a href="#B24-sustainability-16-08945" class="html-bibr">24</a>,<a href="#B40-sustainability-16-08945" class="html-bibr">40</a>,<a href="#B49-sustainability-16-08945" class="html-bibr">49</a>,<a href="#B52-sustainability-16-08945" class="html-bibr">52</a>,<a href="#B53-sustainability-16-08945" class="html-bibr">53</a>,<a href="#B55-sustainability-16-08945" class="html-bibr">55</a>,<a href="#B56-sustainability-16-08945" class="html-bibr">56</a>,<a href="#B81-sustainability-16-08945" class="html-bibr">81</a>,<a href="#B82-sustainability-16-08945" class="html-bibr">82</a>,<a href="#B83-sustainability-16-08945" class="html-bibr">83</a>,<a href="#B84-sustainability-16-08945" class="html-bibr">84</a>,<a href="#B85-sustainability-16-08945" class="html-bibr">85</a>,<a href="#B86-sustainability-16-08945" class="html-bibr">86</a>,<a href="#B87-sustainability-16-08945" class="html-bibr">87</a>,<a href="#B88-sustainability-16-08945" class="html-bibr">88</a>,<a href="#B89-sustainability-16-08945" class="html-bibr">89</a>,<a href="#B90-sustainability-16-08945" class="html-bibr">90</a>,<a href="#B91-sustainability-16-08945" class="html-bibr">91</a>,<a href="#B92-sustainability-16-08945" class="html-bibr">92</a>,<a href="#B93-sustainability-16-08945" class="html-bibr">93</a>,<a href="#B94-sustainability-16-08945" class="html-bibr">94</a>,<a href="#B95-sustainability-16-08945" class="html-bibr">95</a>,<a href="#B96-sustainability-16-08945" class="html-bibr">96</a>,<a href="#B97-sustainability-16-08945" class="html-bibr">97</a>,<a href="#B98-sustainability-16-08945" class="html-bibr">98</a>,<a href="#B99-sustainability-16-08945" class="html-bibr">99</a>]. Each node represents an article, and articles with citation relationships are represented using the same color.</p>
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<p>Network graph of references with the highest local citations within each time slice, with the size of node positively correlated to their local citations and different colored lines represent different time periods [<a href="#B1-sustainability-16-08945" class="html-bibr">1</a>,<a href="#B2-sustainability-16-08945" class="html-bibr">2</a>,<a href="#B6-sustainability-16-08945" class="html-bibr">6</a>,<a href="#B8-sustainability-16-08945" class="html-bibr">8</a>,<a href="#B13-sustainability-16-08945" class="html-bibr">13</a>,<a href="#B21-sustainability-16-08945" class="html-bibr">21</a>,<a href="#B22-sustainability-16-08945" class="html-bibr">22</a>,<a href="#B24-sustainability-16-08945" class="html-bibr">24</a>,<a href="#B40-sustainability-16-08945" class="html-bibr">40</a>,<a href="#B49-sustainability-16-08945" class="html-bibr">49</a>,<a href="#B52-sustainability-16-08945" class="html-bibr">52</a>,<a href="#B53-sustainability-16-08945" class="html-bibr">53</a>,<a href="#B67-sustainability-16-08945" class="html-bibr">67</a>,<a href="#B82-sustainability-16-08945" class="html-bibr">82</a>,<a href="#B83-sustainability-16-08945" class="html-bibr">83</a>,<a href="#B85-sustainability-16-08945" class="html-bibr">85</a>,<a href="#B86-sustainability-16-08945" class="html-bibr">86</a>,<a href="#B89-sustainability-16-08945" class="html-bibr">89</a>,<a href="#B91-sustainability-16-08945" class="html-bibr">91</a>,<a href="#B100-sustainability-16-08945" class="html-bibr">100</a>,<a href="#B101-sustainability-16-08945" class="html-bibr">101</a>,<a href="#B102-sustainability-16-08945" class="html-bibr">102</a>,<a href="#B103-sustainability-16-08945" class="html-bibr">103</a>,<a href="#B104-sustainability-16-08945" class="html-bibr">104</a>,<a href="#B105-sustainability-16-08945" class="html-bibr">105</a>,<a href="#B106-sustainability-16-08945" class="html-bibr">106</a>,<a href="#B107-sustainability-16-08945" class="html-bibr">107</a>,<a href="#B108-sustainability-16-08945" class="html-bibr">108</a>,<a href="#B109-sustainability-16-08945" class="html-bibr">109</a>,<a href="#B110-sustainability-16-08945" class="html-bibr">110</a>,<a href="#B111-sustainability-16-08945" class="html-bibr">111</a>,<a href="#B112-sustainability-16-08945" class="html-bibr">112</a>,<a href="#B113-sustainability-16-08945" class="html-bibr">113</a>,<a href="#B114-sustainability-16-08945" class="html-bibr">114</a>].</p>
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18 pages, 5253 KiB  
Article
Targeted PHA Microsphere-Loaded Triple-Drug System with Sustained Drug Release for Synergistic Chemotherapy and Gene Therapy
by Shuo Wang, Chao Zhang, Huandi Liu, Xueyu Fan, Shuangqing Fu, Wei Li and Honglei Zhang
Nanomaterials 2024, 14(20), 1657; https://doi.org/10.3390/nano14201657 (registering DOI) - 16 Oct 2024
Viewed by 317
Abstract
The combination of paclitaxel (PTX) with other chemotherapy drugs (e.g., gemcitabine, GEM) or genetic drugs (e.g., siRNA) has been shown to enhance therapeutic efficacy against tumors, reduce individual drug dosages, and prevent drug resistance associated with single-drug treatments. However, the varying solubility of [...] Read more.
The combination of paclitaxel (PTX) with other chemotherapy drugs (e.g., gemcitabine, GEM) or genetic drugs (e.g., siRNA) has been shown to enhance therapeutic efficacy against tumors, reduce individual drug dosages, and prevent drug resistance associated with single-drug treatments. However, the varying solubility of chemotherapy drugs and genetic drugs presents a challenge in co-delivering these agents. In this study, nanoparticles loaded with PTX were prepared using the biodegradable polymer material poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (PHBHHx). These nanoparticles were surface-modified with target proteins (Affibody molecules) and RALA cationic peptides to create core-shell structured microspheres with targeted and cationic functionalization. A three-drug co-delivery system (PTX@PHBHHx-ARP/siRNAGEM) were developed by electrostatically adsorbing siRNA chains containing GEM onto the microsphere surface. The encapsulation efficiency of PTX in the nanodrug was found to be 81.02%, with a drug loading of 5.09%. The chemogene adsorption capacity of siRNAGEM was determined to be 97.3%. Morphological and size characterization of the nanodrug revealed that PTX@PHBHHx-ARP/siRNAGEM is a rough-surfaced microsphere with a particle size of approximately 150 nm. This nanodrug exhibited targeting capabilities toward BT474 cells with HER2 overexpression while showing limited targeting ability toward MCF-7 cells with low HER2 expression. Results from the MTT assay demonstrated that PTX@PHBHHx-ARP/siRNAGEM exhibits high cytotoxicity and excellent combination therapy efficacy compared to physically mixed PTX/GEM/siRNA. Additionally, Western blot analysis confirmed that siRNA-mediated reduction of Bcl-2 expression significantly enhanced cell apoptosis mediated by PTX or GEM in tumor cells, thereby increasing cell sensitivity to PTX and GEM. This study presents a novel targeted nanosystem for the co-delivery of chemotherapy drugs and genetic drugs. Full article
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<p>SEM (<b>a</b>), TEM (<b>b</b>), and FTIR (<b>c</b>) analysis.</p>
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<p>Release curves of PTX and siRNA<sub>GEM</sub> in PTX@PHBHHx-ARP/siRNA<sub>GEM</sub>. (<b>a</b>) The PTX drug release curve. (<b>b</b>) The release curve of siRNA<sub>GEM</sub>.</p>
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<p>Drug uptake by BT474 and MCF-7 cells. (<b>a</b>) CLSM analysis of BT474 cells treated with PTX@PHBHHx-ARP/siRNA<sub>GEM</sub> for different times. Panel (<b>b</b>) CLSM analysis of MCF-7 cells treated with PTX@PHBHHx-ARP/siRNA<sub>GEM</sub> for different times. Scale bar: 20 μm.</p>
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<p>Survival of BT474 and MCF-7 cells treated with PTX, GEM, physical mixture of PTX/GEM/siRNA and PTX@PHBHHx-ARP/siRNA<sub>GEM</sub>. (<b>a</b>) The survival rates of the two cell types after 48 h incubation with PTX monotherapy. (<b>b</b>) The survival rates of the two cell types after 48 h incubation with GEM monotherapy. (<b>c</b>) The survival rates of the two cell types after 48 h of incubation with the physical mixture of PTX/GEM/siRNA. (<b>d</b>) The survival rates of the two cell types after 48 h incubation with PTX@PHBHHx-ARP/siRNA<sub>GEM</sub>.</p>
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<p>Western blot of Bcl-2 in (<b>a</b>) BT474 cells and (<b>b</b>) MCF-7 cells treated with free PTX, GEM, PTX/GEM/siRNA, and PTX@PHBHHx-ARP/siRNA<sub>GEM</sub>, respectively. (<b>c</b>) Significance analysis of Bcl-2 in BT474 cells. (<b>d</b>) Significance analysis of Bcl-2 in MCF-7 cells. Statistical analysis: * <span class="html-italic">p</span> &lt; 0.05, **** <span class="html-italic">p</span> &lt; 0.0001 and ns (No significant difference).</p>
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<p>Scatter plots of apoptosis in (<b>a</b>) MCF-7 cells and (<b>b</b>) BT474 cells treated with free PTX, GEM, PTX/GEM/siRNA, and PTX@PHBHHx-ARP/siRNA<sub>GEM</sub>, respectively.</p>
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<p>The assembly process of PTX@PHBHHx-ARP/siRNA<sub>GEM</sub> and their synergistic cancer therapy.</p>
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15 pages, 6127 KiB  
Article
Deer Blood Hydrolysate Protects against D-Galactose-Induced Premature Ovarian Failure in Mice by Inhibiting Oxidative Stress and Apoptosis
by Yu Wang, Hongyan Pei, Weijia Chen, Rui Du, Jianming Li and Zhongmei He
Nutrients 2024, 16(20), 3473; https://doi.org/10.3390/nu16203473 - 14 Oct 2024
Viewed by 414
Abstract
Background: Premature ovarian failure (POF) is a common disease among women, which can cause many complications and seriously threaten women’s physical and mental health. Currently, hormone replacement therapy is the primary treatment for premature ovarian failure. However, the side effects are serious and [...] Read more.
Background: Premature ovarian failure (POF) is a common disease among women, which can cause many complications and seriously threaten women’s physical and mental health. Currently, hormone replacement therapy is the primary treatment for premature ovarian failure. However, the side effects are serious and will increase the chance of breast cancer and endometrial cancer. Deer blood hydrolysate (DBH) is the product of enzymatic hydrolysis of deer blood, has antioxidant, anti-ageing, and anti-fatigue effects, and has the potential to improve premature ovarian failure. Methods: In our experiment, a mouse model of premature ovarian failure was established through intraperitoneal injection of 400 mg/kg/d of D-gal for 42 days. At the same time, different doses of DBH were gavaged to observe its ameliorative effect on premature ovarian failure. Results: The experimental findings indicated that DBH could restore the irregular oestrus cycle of POF mice, improve the abnormal amounts in serum hormones follicle-stimulating hormone (FSH), luteinising hormone (LH), progesterone (P) and estradiol (E2), increase the number of primordial follicles and decrease the number of atretic follicles. In addition, DBH also raised the level of superoxide dismutase (SOD) and reduced the level of malondialdehyde (MDA) and reduced the apoptosis of ovarian granulosa cells in mice. The WB assay results showed that gavage of DBH restored the decrease in the indication of nuclear factor erythroid 2-related factor 2 (Nrf2), Heme Oxygenase-1 (Ho-1), and B-cell lymphoma-2 (Bcl-2) proteins and reduced the elevated expression of Kelch-like ECH-associated protein 1 (Keap1), Bcl-2 associated X protein (Bax), and Cysteinyl aspartate specific proteinase-3 (Caspase-3) proteins that were induced by D-gal. Conclusions: To sum up, the present research indicated that DBH can ameliorate D-gal-induced oxidative stress and apoptosis by regulating the Nrf2/HO-1 signalling pathway and the Bcl-2/Bax/caspase-3 apoptosis pathway, which can be used for further development as a nutraceutical product to improve premature ovarian failure. Full article
(This article belongs to the Section Proteins and Amino Acids)
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<p>Molecular weight distribution of DBH.</p>
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<p>The experimental procedure and the impact of DBH on weight and ovarian and uterine indices in mice. (<b>A</b>) Diagrammatic illustration of the experimental procedure. (<b>B</b>) Changes in body weight of mice during the experiment. (<b>C</b>,<b>D</b>) Effect of DBH on ovarian and uterine indices. (mean ± SEM, <span class="html-italic">n</span> = 8, * <span class="html-italic">p</span> &lt; 0.05 vs. control group, ** <span class="html-italic">p</span> &lt; 0.01 vs. control group, *** <span class="html-italic">p</span> &lt; 0.001 vs. control group, # <span class="html-italic">p</span> &lt; 0.05 vs. POF group, ns <span class="html-italic">p</span> &gt; 0.05 vs. POF group, ### <span class="html-italic">p</span> &lt; 0.001 vs. POF group).</p>
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<p>Effect of DBH on the oestrous cycle in POF mice. (<b>A</b>) Vaginal smears stained with methylene blue solution from different oestrus periods (P is preestrus, E is estrus, M is metestrus and D is diestrus). (<b>B</b>) Frequency of occurrence of cycle stages during the 27 days. (mean ± SEM, <span class="html-italic">n</span> = 8, * <span class="html-italic">p</span> &lt; 0.05 and ** <span class="html-italic">p</span> &lt; 0.01 vs. the control group; # <span class="html-italic">p</span> &lt; 0.05 and ## <span class="html-italic">p</span> &lt; 0.01 vs. the POF group). (<b>C</b>) Common patterns of regular and irregular estrus cycles.</p>
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<p>The impact of DBH on serum sexual hormones. (<b>A</b>–<b>D</b>) The FSH, LH, P and E2 levels of serum in different treatment groups. (mean ± SEM, <span class="html-italic">n</span> = 8, * <span class="html-italic">p</span> &lt; 0.05 and ** <span class="html-italic">p</span> &lt; 0.01 vs. the control group; # <span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Effects of DBH on oxidative stress. (<b>A</b>) The SOD activity and (<b>B</b>) the MDA content were measured in the ovarian tissues. (mean ± SEM, <span class="html-italic">n</span> = 8, * <span class="html-italic">p</span> &lt; 0.05 vs. the control group; # <span class="html-italic">p</span> &lt; 0.05 vs. the POF group).</p>
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<p>The ovaries were stained using H&amp;E stain (100×) (<span class="html-italic">n</span> = 8).</p>
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<p>The impact of DBH on D-gal-induced ovarian cell apoptosis. (<b>A</b>): In situ TUNEL was used to analyse apoptosis. (200×) (<b>B</b>): Proportion of TUNEL-positive granulocytes to total cell count in different treatment groups. (mean ± SEM, <span class="html-italic">n</span> = 8, ** <span class="html-italic">p</span> &lt; 0.01 vs. the control group; ## <span class="html-italic">p</span> &lt; 0.01 vs. the POF group).</p>
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<p>DBH’s effect on the expression of Nrf2/HO-1 and Bcl-2/Bax/caspase-3 within ovarian tissues. (<b>A</b>,<b>E</b>) Images that are representative of western blotting results. (<b>B</b>–<b>D</b>) Quantification of the expression of Nrf2, HO-1, and Keap1. (<b>F</b>–<b>H</b>) Quantification of the protein expression of Bcl-2, Bax, and caspase-3. (mean ± SEM, <span class="html-italic">n</span> = 3, ** <span class="html-italic">p</span> &lt; 0.01 vs. the control group; # <span class="html-italic">p</span> &lt; 0.05 and ## <span class="html-italic">p</span> &lt; 0.01 vs. the POF group).</p>
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13 pages, 1292 KiB  
Article
A Machine Learning Approach to Gene Expression in Hypertrophic Cardiomyopathy
by Jelena Pavić, Marko Živanović, Irena Tanasković, Ognjen Pavić, Vesna Stanković, Katarina Virijević, Tamara Mladenović, Jelena Košarić, Bogdan Milićević, Safi Ur Rehman Qamar, Lazar Velicki, Ivana Novaković, Andrej Preveden, Dejana Popović, Milorad Tesić, Stefan Seman and Nenad Filipović
Pharmaceuticals 2024, 17(10), 1364; https://doi.org/10.3390/ph17101364 - 12 Oct 2024
Viewed by 371
Abstract
Background/Objectives: Hypertrophic cardiomyopathy (HCM) is a common heart disorder characterized by the thickening of the heart muscle, particularly in the left ventricle, which increases the risk of cardiac complications. This study aims to analyze the expression of apoptosis-regulating genes (CASP8, CASP9 [...] Read more.
Background/Objectives: Hypertrophic cardiomyopathy (HCM) is a common heart disorder characterized by the thickening of the heart muscle, particularly in the left ventricle, which increases the risk of cardiac complications. This study aims to analyze the expression of apoptosis-regulating genes (CASP8, CASP9, CASP3, BAX, and BCL2) in blood samples from HCM patients, to better understand their potential as biomarkers for disease progression. Methods: Quantitative real-time PCR (qPCR) was used to evaluate gene expression in blood samples from 93 HCM patients. The correlation between apoptosis-regulating genes was conducted and clinical parameters were integrated for feature importance and clustering analysis. Results: Most patients exhibited significant downregulation of CASP8, CASP9, and CASP3. In contrast, BAX expression was elevated in 71 out of 93 patients, while BCL2 was increased in 55 out of 93 patients. Correlation analysis revealed weak negative correlations between the BAX/BCL2 ratio and CASP gene expression. Conclusions: These findings suggest that reduced expression of apoptotic genes may indicate a protective cellular mechanism, which could serve as a biomarker for disease progression. Further studies are needed to investigate the potential for therapeutic modulation of these pathways to improve patient outcomes. Full article
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<p>Heatmap showing expression of selected genes across patient samples. The color intensity represents the level of gene expression: bright red indicates high expression; white indicates average expression; light-blue indicates low expression. Rows correspond to individual patients and columns represent specific genes (<span class="html-italic">CASP8</span>, <span class="html-italic">CASP9</span>, <span class="html-italic">CASP3</span>, <span class="html-italic">BAX</span>, and <span class="html-italic">BCL2</span>).</p>
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<p>Correlation between the <span class="html-italic">BAX</span>/<span class="html-italic">BCL2</span> ratio and <span class="html-italic">CASP</span> genes.</p>
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<p>Ground truth state of HCM patients expressed by apoptotic genes (the red points represent high-risk patients, while the green points represent low-risk patients).</p>
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<p>K-means clustered HCM patients expressed by apoptotic genes (the red points represent high-risk patients, while the green points represent low-risk patients).</p>
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17 pages, 2866 KiB  
Article
Metabolomic Profiling and Network Toxicology: Mechanistic Insights into Effect of Gossypol Acetate Isomers in Uterine Fibroids and Liver Injury
by Zishuo Liu, Hui Zhang and Jun Yao
Pharmaceuticals 2024, 17(10), 1363; https://doi.org/10.3390/ph17101363 - 12 Oct 2024
Viewed by 506
Abstract
Objective: Gossypol is a natural polyphenolic dialdehyde product that is primarily isolated from cottonseed. It is a racemized mixture of (−)-gossypol and (+)-gossypol that has anti-infection, antimalarial, antiviral, antifertility, antitumor and antioxidant activities, among others. Gossypol optical isomers have been reported to differ [...] Read more.
Objective: Gossypol is a natural polyphenolic dialdehyde product that is primarily isolated from cottonseed. It is a racemized mixture of (−)-gossypol and (+)-gossypol that has anti-infection, antimalarial, antiviral, antifertility, antitumor and antioxidant activities, among others. Gossypol optical isomers have been reported to differ in their biological activities and toxic effects. Method: In this study, we performed a metabolomics analysis of rat serum using 1H-NMR technology to investigate gossypol optical isomers’ mechanism of action on uterine fibroids. Network toxicology was used to explore the mechanism of the liver injury caused by gossypol optical isomers. SD rats were randomly divided into a normal control group; model control group; a drug-positive group (compound gossypol acetate tablets); high-, medium- and low-dose (−)-gossypol acetate groups; and high-, medium- and low-dose (+)-gossypol acetate groups. Result: Serum metabolomics showed that gossypol optical isomers’ pharmacodynamic effect on rats’ uterine fibroids affected their lactic acid, cholesterol, leucine, alanine, glutamate, glutamine, arginine, proline, glucose, etc. According to network toxicology, the targets of the liver injury caused by gossypol optical isomers included HSP90AA1, SRC, MAPK1, AKT1, EGFR, BCL2, CASP3, etc. KEGG enrichment showed that the toxicity mechanism may be related to pathways active in cancer, such as the PPAR signaling pathway, glycolysis/glycolysis gluconeogenesis, Th17 cell differentiation, and 91 other closely related signaling pathways. Conclusions: (−)-gossypol acetate and (+)-gossypol acetate play positive roles in the treatment and prevention of uterine fibroids. Gossypol optical isomers cause liver damage through multiple targets and pathways. Full article
(This article belongs to the Section Pharmacology)
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<p>(<b>A</b>) 1H-NMR differential metabolite spectra of the serum from rats in each group. (1) Blank group; (2) uterine fibroid model group; (3) high-dose (+)-gossypol acetate group; (4) high-dose (−)-gossypol acetate group; and (5) positive control group. (<b>B</b>) Three-dimensional spatial distribution map of PLS-DA analysis. (1: positive control group; 2: high-dose (+)-gossypol acetate group; 3: high-dose (−)-gossypol acetate group; 4: model control group 5: normal control group). The corresponding metabolites 1–27 are listed in detail in <a href="#pharmaceuticals-17-01363-t001" class="html-table">Table 1</a>.</p>
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<p>Serum OPLS-DA scores of the rats in each group (<b>left</b>) with model verification (<b>right</b>). (<b>A</b>) Positive control group vs. model group; (<b>B</b>) high-dose (+)-gossypol acetate group vs. model group; (<b>C</b>) high-dose (−)-gossypol acetate group vs. model group; and (<b>D</b>) normal control group vs. model group.</p>
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<p>(<b>A</b>) Common targets of gossypol isomer-induced hepatotoxicity. (<b>B</b>) “component-target interaction” PPI network diagram (<b>C</b>) GO enrichment analysis of targets related to gossypol isomers. (<b>D</b>) KEGG enrichment analysis of targets related to gossypol isomers.</p>
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<p>(<b>A</b>) Common targets of gossypol isomer-induced hepatotoxicity. (<b>B</b>) “component-target interaction” PPI network diagram (<b>C</b>) GO enrichment analysis of targets related to gossypol isomers. (<b>D</b>) KEGG enrichment analysis of targets related to gossypol isomers.</p>
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16 pages, 5811 KiB  
Article
Modulation of Carnitine Palmitoyl Transferase 1b Expression and Activity in Muscle Pathophysiology in Osteoarthritis and Osteoporosis
by Chiara Greggi, Manuela Montanaro, Maria Giovanna Scioli, Martina Puzzuoli, Sonia Gino Grillo, Manuel Scimeca, Alessandro Mauriello, Augusto Orlandi, Elena Gasbarra, Riccardo Iundusi, Sabina Pucci and Umberto Tarantino
Biomolecules 2024, 14(10), 1289; https://doi.org/10.3390/biom14101289 - 12 Oct 2024
Viewed by 272
Abstract
In the pathophysiology of osteoarthritis and osteoporosis, articular cartilage and bone represent the target tissues, respectively, but muscle is also involved. Since many changes in energy metabolism occur in muscle with aging, the aim of the present work was to investigate the involvement [...] Read more.
In the pathophysiology of osteoarthritis and osteoporosis, articular cartilage and bone represent the target tissues, respectively, but muscle is also involved. Since many changes in energy metabolism occur in muscle with aging, the aim of the present work was to investigate the involvement of carnitine palmitoyl transferase 1b (Cpt1b) in the muscle pathophysiology of the two diseases. Healthy subjects (CTR, n = 5), osteoarthritic (OA, n = 10), and osteoporotic (OP, n = 10) patients were enrolled. Gene expression analysis conducted on muscle and myoblasts showed up-regulation of CPT1B in OA patients; this result was confirmed by immunohistochemical and immunofluorescence analyses and enzyme activity assay, which showed increased Cpt1b activity in OA muscle. In addition, CPT1B expression resulted down-regulated in cultured OP myoblasts. Given the potential involvement of Cpt1b in the modulation of oxidative stress, we investigated ROS levels, which were found to be lower in OA myoblasts, and gene expression of nicotinamide adenine dinucleotide phosphate hydrogen oxidase 4 (Nox4), which resulted up-regulated in OA cells. Finally, the immunofluorescence of BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (Bnip3) showed a decreased expression in OP myoblasts, with respect to CTR and OA. Contextually, through an ultrastructural analysis conducted by Transmission Electron Microscopy (TEM), the presence of aberrant mitochondria was observed in OP muscle. This study highlights the potential role of Cpt1b in the regulation of muscle homeostasis in both osteoarthritis and osteoporosis, allowing for the expansion of the current knowledge of what are the molecular biological pathways involved in the regulation of muscle physiology in both diseases. Full article
(This article belongs to the Special Issue Skeletal Muscle Homeostasis and Regeneration)
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<p><b>Morphological analyses and characterization of muscle fibers from CTR, OA, and OP patients.</b> (<b>A</b>–<b>F</b>) Representative images at different magnifications of hematoxylin–eosin-stained muscle sections from healthy (CTR), OA, and OP patients (scale bar = 100 µm). (<b>G</b>–<b>I</b>) Immunohistochemical staining for myosin fast (scale bar = 100 µm). (<b>J</b>,<b>K</b>) Graphs showing morphometric evaluation of muscle fibers’ diameter and the percentage of type II muscle fibers in CTR, OA, and OP patients. Results are reported as mean ± SEM; <span class="html-italic">t</span>-test: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01.</p>
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<p><b>CPT1B expression and activity in muscle tissue from CTR, OA, and OP patients.</b> (<b>A</b>) Immunohistochemical staining for Cpt1b of muscle sections from healthy (CTR), OA, and OP patients (scale bar = 100 µm). (<b>B</b>) Graph showing the percentage of CPT1B-positive fibers in CTR, OA, and OP patients. (<b>C</b>) Cpt1b activity in muscle tissues from CTR, OA, and OP patients. (<b>D</b>) <span class="html-italic">CPT1B</span> transcript levels in muscle tissues from CTR, OA, and OP patients. Results are reported as mean ± SEM; <span class="html-italic">t</span>-test: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01. Abbreviation: O.D., optical density.</p>
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<p><b>CPT1B expression in cultured myoblasts from CTR, OA, and OP patients.</b> (<b>A</b>) Immunofluorescence for CPT1B in cultured myoblasts from healthy (CTR), OA, and OP patients (scale bar = 100 µm). (<b>B</b>) <span class="html-italic">CPT1B</span> transcript levels in cultured myoblasts from CTR, OA, and OP patients. Results are reported as mean ± SEM; <span class="html-italic">t</span>-test: * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01.</p>
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<p><b>Oxidative stress and <span class="html-italic">NOX4</span> expression in cultured myoblasts from CTR, OA, and OP patients.</b> (<b>A</b>) ROS levels in cultured myoblasts from healthy (CTR), OA, and OP patients. (<b>B</b>) <span class="html-italic">NOX4</span> transcript levels in cultured myoblasts from CTR, OA, and OP patients. Results are reported as mean ± SEM; <span class="html-italic">t</span>-test: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01. Abbreviation: F.I., fluorescence intensity.</p>
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<p><b>Bnip3 localization in cultured myoblasts from CTR, OA, and OP patients.</b> Immunofluorescence for Bnip3 in cultured myoblasts from CTR, OA, and OP patients (scale bar = 100 µm). Specifically, in CTR myoblasts, the protein is diffuse along all the cytoplasm, whereas in OA myoblasts, Bnip3 is aggregated in numerous and distinct spots (puncta) similar to autophagosomes (white arrowheads). OP myoblasts revealed a lower expression of Bnip3 with no evident puncta.</p>
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<p><b>Ultrastructural analysis of muscle tissue from CTR, OA, and OP patients.</b> Transmission electron microscopy (TEM) of muscle tissue from CTR, OA, and OP patients. Images of CTR muscle fibers show the presence of well-organized sarcomeres (arrows), as well as for OA patients, while sarcomeres of OP muscle appear not well defined. Numerous glycogen granules (white arrowheads) characterize the muscle fibers of CTR and OA patients in contrast with OP group. Increased intermyofibrillar space is also observed in OP muscle, in which their presence appears reduced (double arrow). In addition, mitochondria (m) in the muscle tissue of CTR and OA patients display intact and well-organized cristae; in the muscle tissue of OP patients, on the contrary, mitochondria appeared irregularly shaped with loose mitochondrial cristae.</p>
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17 pages, 965 KiB  
Review
B Cell Lymphoma 6 (BCL6): A Conserved Regulator of Immunity and Beyond
by Clifford Liongue, Farooq L. J. Almohaisen and Alister C. Ward
Int. J. Mol. Sci. 2024, 25(20), 10968; https://doi.org/10.3390/ijms252010968 - 11 Oct 2024
Viewed by 377
Abstract
B cell lymphoma 6 (BCL6) is a conserved multi-domain protein that functions principally as a transcriptional repressor. This protein regulates many pivotal aspects of immune cell development and function. BCL6 is critical for germinal center (GC) formation and the development of high-affinity antibodies, [...] Read more.
B cell lymphoma 6 (BCL6) is a conserved multi-domain protein that functions principally as a transcriptional repressor. This protein regulates many pivotal aspects of immune cell development and function. BCL6 is critical for germinal center (GC) formation and the development of high-affinity antibodies, with key roles in the generation and function of GC B cells, follicular helper T (Tfh) cells, follicular regulatory T (Tfr) cells, and various immune memory cells. BCL6 also controls macrophage production and function as well as performing a myriad of additional roles outside of the immune system. Many of these regulatory functions are conserved throughout evolution. The BCL6 gene is also important in human oncology, particularly in diffuse large B cell lymphoma (DLBCL) and follicular lymphoma (FL), but also extending to many in other cancers, including a unique role in resistance to a variety of therapies, which collectively make BCL6 inhibitors highly sought-after. Full article
(This article belongs to the Section Molecular Immunology)
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<p>Structure and function of the BCL6 protein. (<b>A</b>). Domains of the BCL6 protein: BTB (light blue), RD2/PEST (blue), and ZF (dark blue, with striping for fingers not involved in DNA binding). Above is a schematic representation of the structure of each domain along with their interacting proteins, including co-repressors (pink) and associated transcriptional regulators (orange) and DNA modifying proteins (green), with sites of ubiquitination (Ub), phosphorylation (P), and acetylation (Ac) indicated (brown). (<b>B</b>). Major molecular function(s) of each domain. (<b>C</b>). Biological roles mapped to the molecular functions, with proven connections shown as filled boxes and assumed ones as unfilled boxes. Abbreviations: BTB: broad complex/tram track/bric-a-brac; RD2: repression domain 2; PEST: proline–glutamic acid–serine–threonine; ZF: zinc finger.</p>
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14 pages, 3836 KiB  
Article
Mitochondria-Targeted Antioxidant MitoQ Improves In Vitro Maturation and Subsequent Embryonic Development from Culled Cows
by Zhihao Feng, Junsong Shi, Jiajie Ren, Lvhua Luo, Dewu Liu, Yongqing Guo, Baoli Sun, Guangbin Liu, Ming Deng and Yaokun Li
Animals 2024, 14(20), 2929; https://doi.org/10.3390/ani14202929 - 11 Oct 2024
Viewed by 302
Abstract
The purpose of this study was to investigate the effects and mechanisms of MitoQ on the IVM of culled bovine oocytes and subsequent embryonic development. The results revealed that in comparison to the control group (0 µmol/L), the IVM rate (p < [...] Read more.
The purpose of this study was to investigate the effects and mechanisms of MitoQ on the IVM of culled bovine oocytes and subsequent embryonic development. The results revealed that in comparison to the control group (0 µmol/L), the IVM rate (p < 0.05) and subsequent blastocyst rate (p < 0.05) of the low-concentration 1 and 5 µmol/L MitoQ treatment group were increased. The level of ROS (p < 0.05) in the MitoQ treatment group was decreased in comparison to the control group. Additionally, the level of GSH, MMP, ATP, and mt-DNA in the MitoQ treatment group was increased (p < 0.05) in comparison to the control group. The expression level of BAX was decreased (p < 0.05) in the MitoQ treatment group, and the BCL2, DNM1, Mfn2, SOD, and CAT were increased (p < 0.05). In conclusion, MitoQ improved mitochondrial dysfunction, increased mitochondrial activity during IVM, and reduced oxidative stress, resulting in increased IVM rates and subsequent embryonic development from culled cows. Full article
(This article belongs to the Section Cattle)
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<p>Influences of MitoQ on subsequent embryonic development and quality. Representative images of blastocyst development on day 7 for control group and (1, 5, 10 µmol/L) MitoQ treatment groups. Scale bar: 200 µm.</p>
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<p>Influences of MitoQ on the ROS level in matured bovine oocytes. (<b>A</b>) Representative images of ROS (green) staining of oocytes in control group and MitoQ treatment group. Scale bar: 200 µm. (<b>B</b>) Analysis of ROS fluorescent intensity data. All experiments were performed in at least three replications, and the data statistics were represented by mean ± SEM. Values (a, b) with different superscripts in the columns are significantly different (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Influences of MitoQ on the GSH level in matured bovine oocytes. (<b>A</b>) Representative images of GSH (blue) staining of oocytes in control group and MitoQ treatment group. Scale bar: 200 µm. (<b>B</b>) Analysis of GSH fluorescent intensity data. All experiments were performed in at least three replications, and the data statistics were represented by mean ± SEM. Values (a, b) with different superscripts in the columns are significantly different (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Influences of MitoQ on the MMP level in matured bovine oocytes. (<b>A</b>) Representative images of MMP (red) staining of oocytes in control group and MitoQ treatment group. Scale bar: 200 µm. (<b>B</b>) Analysis of MMP fluorescent intensity data. All experiments were performed in at least three replications, and the data statistics were represented by mean ± SEM. Values (a, b) with different superscripts in the columns are significantly different (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Influences of MitoQ on mitochondrial function in matured bovine oocytes. (<b>A</b>) Quantitative analysis of ATP content level. (<b>B</b>) Quantitative analysis of mt-DNA copies number level. All experiments were performed in at least three replications, and the data statistics were represented by mean ± SEM. Values (a, b) with different superscripts in the columns are significantly different (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Influences of MitoQ on antioxidant-related and mitochondria-related genes in matured bovine oocytes. qPCR quantitative analysis of mRNA expression of apoptosis-related genes (BAX, BCL2), antioxidant-related genes (CAT, SOD), and mitochondria-related genes (DNM1, MFN2). All experiments were performed in three replications, and the data statistics were represented by mean ± SEM. Values (a, b) with different superscripts in the columns are significantly different (<span class="html-italic">p</span> &lt; 0.05).</p>
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