[go: up one dir, main page]
KEGG   Ricinus communis (castor bean): 8277322
Entry
8277322           CDS       T01087                                 
Name
(RefSeq) histone acetyltransferase HAC12-like isoform X1
  KO
K04498  E1A/CREB-binding protein [EC:2.3.1.48]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03083  Polycomb repressive complex
rcu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    8277322
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8277322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rcu03000]
    8277322
   03036 Chromosome and associated proteins [BR:rcu03036]
    8277322
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8277322
Enzymes [BR:rcu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     8277322
Transcription factors [BR:rcu03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain CBP
    8277322
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    8277322
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Coactivators
    8277322
SSDB
Motif
Pfam: HAT_KAT11 zf-TAZ PHD ZZ DUF287
Other DBs
NCBI-GeneID: 8277322
NCBI-ProteinID: XP_025014349
Position
5:complement(10764074..10776811)
AA seq 1452 aa
MLAKENMSGKTFGQKQNFSFSKFACLFELGGTATHRHPTNELNGLNDWRNGPRISCFRDL
VRKRIAGICELEANYQWKELGSNFVNLLENQLFMEAASEEEYMNQDVLRWRLQDLIQRVM
VGLNCSPELPSYTAPCKVMPTLGLAHGYNSDAADSPSNHLNQNICGSNSMVAGRNQLRFL
KELLDNKDSHMRQISNDMLLSPEMSSVITTFSERGSTITASSNGDGFSEVEAFNGGPFFT
KQDYQHSFEVASKDSCQQQYLAQGVANNENLPARDFVSTFREGSEFTDSVLHIPEHASQV
ISEDSMFSSMGFSRMNPEAQILEQKQWQPYLSHEQFNKPFHLDEPMYYLAQQGEFSSPIA
GQAVSMHSQLPSEQLHGIHVASESFSLLSNSKEIAGPKHDSFECKILHAYSSHKNSAMPT
GDCLVSFVNYLHSTFCKDRSCKCRHFCALLSHFDKCCYANCDICGPLRDHPLTHNHHQNG
SFLGDSSKTNTGGSGSCSSENMLPPTKRFKPSSYCSENSLPFSGHLKVNKSSSLLSSDKR
TSVLAPLTVQPSDPEGLLPLLQWPESPVSINSEVLEGNTEFSTRPMQSPSRFYQKGNSAG
EQFLSPNAESLCRPSKELIVAPKSEEIDSRSFGGTVDSVRDKADQLRVNSMPALFEEPGT
SSKEEVIQIASNCDLAKPDLEAEMNEEMKAENPKTRGVSLIEFFSADEIKDHISSLRQWI
GQRISKEEKEEQEIHCANENTCQLCAADKLLLAPVPIYCSSCGSRIKRSVIYYNASEENG
TRHSFCTLCYKARGASITFYGITIPKAKLDKKKNDEEIEEPWVQCDKCKSWQHQICALFN
DKRDMEGESEYICPKCCLEEIRRWGHMPLPKSTVLGAKDLPSTLLSDFIEQRLFRRLQQE
KEDKAKVIGKNIDEVPGAENLVVRVVLSVKKQLKVKKQFLEIFRDGNYPDEFSYSSKVIL
LFQKIEGVDVCLFGMYVQEFGSECSQPNHRCVYISYLDSVKYFRPERQTATGEALRTFVY
HEILIGYLEYCKKQGFAACYLWACPPLKGEDYILYSHPAIQKTPKSDKLRQWYNSMLRKA
AKENVVVNVTNLYDHLFVPSGQFHSKVTAARLPYFDGDYWSGAAETIINNIEQQNGKSSG
RKIKKSMTKRTLKAMGHTNPSDDITKEVLLMQKLGQTIFPVKEDFFVLHLQFVCTSCHEV
ISYGQRWFCSQCKNFQLCERCHDLEHSLNGGDTHAISSKEKHLLSKIMVDDIPSDTKDED
VILDSWLFENRHTLLGFCQKNHHQFDTLRRAKHSSMMILHHLHNPIMSTTATTCNICQQD
INAEDRNVCATCRNKKFGLFRIHKLAYQSSAANCETENRDAWRGLLKLKELLYVLQHASQ
CRTTNGEPCSYPNCLLVRRLLYHASNCTIRIRRGCPGCIKAWKILWIHAKFCRQADCCVP
RCRDLKSHMHAL
NT seq 4359 nt   +upstreamnt  +downstreamnt
atgcttgcaaaggaaaatatgtcagggaagacatttggccagaaacaaaacttttctttc
tcaaaatttgcatgtctgtttgagttgggagggactgccacacatcgtcaccccacaaat
gaattgaatggcctgaatgactggcgcaatggtcctagaatcagctgctttcgtgatttg
gttagaaagaggattgctggaatttgtgaattggaagcaaattatcaatggaaagagcta
ggatccaattttgttaacctcttagaaaaccaactattcatggaagctgcttcagaggag
gagtatatgaatcaggatgtgctgagatggcggttgcaggacttaatccaaagggtgatg
gttggcttaaactgcagtcctgaattgcccagctacactgctccatgcaaagtgatgcca
accttgggtttggctcatggttacaattcagatgcagcagattctccttctaatcactta
aaccaaaacatttgtggatctaactcaatggtggctggcagaaatcaacttcgctttcta
aaagaattacttgataataaggattcacacatgaggcagatttctaatgacatgctcctt
tctcctgaaatgagctctgtcattactacattttctgaaaggggttctaccattaccgca
agttccaatggagatggcttttccgaggttgaagcttttaatggtggaccattctttacc
aagcaagactatcaacatagttttgaggttgcatccaaggatagctgtcaacaacaatat
cttgctcagggtgttgcaaacaatgagaaccttcctgccagagattttgtatctactttt
agagaaggctcagagttcactgattcagttttgcatatcccagaacatgcttctcaagta
atttcagaagactctatgttctctagcatgggcttcagcagaatgaatcctgaagcacag
attctggaacagaaacagtggcaaccttatttgtctcatgagcaatttaataagcctttt
catctggatgaaccaatgtattaccttgctcaacaaggtgaatttagcagtccaattgct
ggacaagcagtttctatgcattctcagctcccttcagaacaacttcatggcattcatgtt
gcttcagaaagtttttcacttctttccaattcaaaggaaattgctggtcctaaacatgat
tcttttgaatgcaagatcttacatgcatattctagccacaagaattcagctatgcccaca
ggggattgcctagtttcttttgttaattatttgcattcaacattttgtaaagatcgaagt
tgcaagtgcagacatttctgcgcacttctatcacattttgacaaatgttgctatgctaat
tgtgatatctgtggtcctcttcgagatcatcctttaacccacaatcatcaccaaaatggt
agctttttgggggattccagcaagactaacactggtggatctggctcttgctcctcagaa
aacatgctgccacctacaaaacgatttaagcccagctcttactgttcagagaattcgcta
ccattttcaggtcatctgaaggtgaataagtcctctagtctgttgtcatctgataaaaga
acttctgttttggccccgttgactgttcaaccctctgatcctgaaggtcttctgcccttg
ctgcaatggccagaatctcctgtgtctattaattctgaagttttggaggggaacactgaa
ttttctacaaggcccatgcaaagtccttcaaggttttatcagaaaggaaatagtgctggg
gaacaatttttgagtcctaatgctgagagcttgtgcaggccttctaaagaactgattgtt
gctcctaagtcagaggagatagactctagaagttttggaggaactgtcgattctgtaaga
gataaggctgaccagttaagggttaattccatgcctgctctctttgaagagcctggtacc
tcttctaaagaggaggtgatacagattgcatctaattgtgaccttgccaagccagattta
gaggctgaaatgaatgaagagatgaaggcggagaatccaaagacaagaggtgtgtccttg
attgaatttttctctgcagatgaaataaaggaccacatatcaagccttcggcagtggatt
ggccagagaatatcaaaggaagaaaaggaagaacaagaaattcattgtgccaatgagaat
acatgccagttgtgtgcagcagataagcttttactagccccagttccaatatattgctca
tcttgtggttctcgcatcaaacgcagtgtgatttattataacgcctcagaggaaaatggt
acgaggcattctttctgtactttatgttataaggctcgaggtgcgagtatcacattctat
gggataactatccccaaggcaaagctggataagaagaagaatgatgaggaaattgaagaa
ccatgggtccagtgtgacaaatgtaaaagctggcaacatcagatatgtgctctcttcaat
gataaaagagatatggaaggggaatctgagtacatatgtcccaaatgctgcttagaagag
attagaaggtggggacatatgccattgccaaaatctactgttcttggcgcaaaagatttg
ccaagcactttgcttagtgacttcatagagcaaagactctttagacgtcttcagcaagag
aaagaagataaagcaaaggttattggaaaaaacattgatgaggttcctggagctgaaaac
cttgttgtcagggtggtgttatctgttaagaaacagttgaaagtgaagaagcagttctta
gaaatttttcgagatggcaattaccctgatgaattttcatatagctcaaaggtgattctt
ttgttccagaagattgaaggagtagatgtatgcctttttggcatgtatgtgcaggagttt
ggatcagagtgcagtcagccgaatcaccgctgtgtttatatctcttatctggactcggtc
aaatactttaggcctgaaagacaaactgcaactggagaagctcttcgtacttttgtttac
catgaaatcttgataggatatcttgaatactgtaagaaacaaggttttgcggcatgctat
ttatgggcctgcccacctctaaagggagaagattatatcttatatagccatccagcaatt
cagaagacaccaaaatctgacaagttgcggcaatggtacaattcaatgctaagaaaagca
gccaaagaaaatgtcgtggtcaacgtcactaacttatatgaccatctctttgttcctagt
ggacaatttcactccaaggtaacggcagctcgcttgccatattttgatggtgactattgg
tctggtgctgctgagactatcatcaataacattgagcagcaaaatggaaaatcttcaggg
aggaagattaagaaatcaatgacaaaaagaactcttaaagccatgggccatacaaatcct
tctgatgatatcaccaaagaagttctactgatgcaaaaactagggcaaactatctttcct
gttaaggaggatttctttgttctccatttgcaatttgtttgcacatcctgccacgaagtg
atatcatatgggcagcgatggttttgcagtcaatgcaaaaattttcagctatgtgaaaga
tgccatgatctggagcacagcctcaatggaggggacacacacgctataagtagcaaagaa
aaacatctactctctaagattatggtggacgatattccatctgataccaaggatgaagat
gttattctggatagttggttatttgaaaataggcataccttattaggtttctgtcagaag
aatcaccatcagtttgacacacttcgacgagctaagcattcttcaatgatgatcctgcat
catcttcataatccaataatgtccactactgcaaccacctgcaacatttgtcagcaggat
atcaatgccgaggataggaatgtttgtgccacatgccgtaataagaaatttggtctattt
cgtattcataagttggcttatcagtcttctgctgctaattgtgagactgagaatagagat
gcatggcggggattactcaagctaaaggaactgctatatgttctacaacatgcctcgcaa
tgtagaacaaccaatggtgaaccctgttcttacccaaactgccttctggttagaaggttg
ctctaccatgcatctaattgcaccattcggatcagaagaggttgtccgggctgcataaag
gcgtggaagatactttggattcatgcaaaattttgcaggcaagcagattgctgcgtgccg
cgctgcagagatttgaagagtcatatgcatgcactgtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (77)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (5)   
   Pfam (5)   
All databases (111)   

Download RDF
DBGET integrated database retrieval system